MC04g0361 (gene) Bitter gourd (Dali-11) v1

Overview
NameMC04g0361
Typegene
OrganismMomordica charantia cv. Dali-11 (Bitter gourd (Dali-11) v1)
DescriptionLOW QUALITY PROTEIN: uncharacterized protein LOC107467256
LocationMC04: 2887594 .. 2887695 (-)
RNA-Seq ExpressionMC04g0361
SyntenyMC04g0361
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATTGTAGGGCTTTACCCCGAAGGGAGCCCTTCCAGAAATTCTCTTGGGCATGGGCCAAACCCAGGCCCAAGAGGGGGTTTGGAAATAGTTTTCAACCAGCAA

mRNA sequence

ATTGTAGGGCTTTACCCCGAAGGGAGCCCTTCCAGAAATTCTCTTGGGCATGGGCCAAACCCAGGCCCAAGAGGGGGTTTGGAAATAGTTTTCAACCAGCAA

Coding sequence (CDS)

ATTGTAGGGCTTTACCCCGAAGGGAGCCCTTCCAGAAATTCTCTTGGGCATGGGCCAAACCCAGGCCCAAGAGGGGGTTTGGAAATAGTTTTCAACCAGCAA

Protein sequence

IVGLYPEGSPSRNSLGHGPNPGPRGGLEIVFNQQ
Homology
BLAST of MC04g0361 vs. NCBI nr
Match: XP_028788419.1 (uncharacterized protein LOC114744414 [Prosopis alba])

HSP 1 Score: 62.8 bits (151), Expect = 6.19e-12
Identity = 29/33 (87.88%), Postives = 30/33 (90.91%), Query Frame = 0

Query: 2  VGLYPEGSPSRNSLGHGPNPGPRGGLEIVFNQQ 34
          VGLYP+GSPSRNS   GPNPGPRGGLEIVFNQQ
Sbjct: 15 VGLYPKGSPSRNSQRPGPNPGPRGGLEIVFNQQ 47

BLAST of MC04g0361 vs. NCBI nr
Match: XP_015941779.1 (LOW QUALITY PROTEIN: uncharacterized protein LOC107467256 [Arachis duranensis])

HSP 1 Score: 60.1 bits (144), Expect = 6.42e-11
Identity = 29/34 (85.29%), Postives = 29/34 (85.29%), Query Frame = 0

Query: 1  IVGLYPEGSPSRNSLGHGPNPGPRGGLEIVFNQQ 34
          IVGLYP GSPSRNS   GPNPG RGGLEIVFNQQ
Sbjct: 8  IVGLYPXGSPSRNSQRPGPNPGLRGGLEIVFNQQ 41

BLAST of MC04g0361 vs. NCBI nr
Match: XP_024164334.1 (LOW QUALITY PROTEIN: uncharacterized protein LOC112171368 [Rosa chinensis])

HSP 1 Score: 58.5 bits (140), Expect = 2.90e-10
Identity = 30/35 (85.71%), Postives = 30/35 (85.71%), Query Frame = 0

Query: 1  IVGLYPEGSPSRNS-LGHGPNPGPRGGLEIVFNQQ 34
          IVGLYPEGSPSRNS  G G NPGP GGLEIVFNQQ
Sbjct: 12 IVGLYPEGSPSRNSRXGTGLNPGPGGGLEIVFNQQ 46

BLAST of MC04g0361 vs. NCBI nr
Match: XP_024025392.1 (uncharacterized protein LOC112092745 [Morus notabilis])

HSP 1 Score: 58.2 bits (139), Expect = 5.03e-10
Identity = 28/34 (82.35%), Postives = 29/34 (85.29%), Query Frame = 0

Query: 1  IVGLYPEGSPSRNSLGHGPNPGPRGGLEIVFNQQ 34
          IVGLYP GSPSRNS   G +PGPRGGLEIVFNQQ
Sbjct: 22 IVGLYPLGSPSRNSQRPGSSPGPRGGLEIVFNQQ 55

BLAST of MC04g0361 vs. NCBI nr
Match: XP_022144155.1 (LOW QUALITY PROTEIN: uncharacterized protein LOC111013914 [Momordica charantia])

HSP 1 Score: 58.5 bits (140), Expect = 5.18e-10
Identity = 28/34 (82.35%), Postives = 29/34 (85.29%), Query Frame = 0

Query: 1  IVGLYPEGSPSRNSLGHGPNPGPRGGLEIVFNQQ 34
          IVGL P+GSPSRNS    PNPGPRGGLEIVFNQQ
Sbjct: 9  IVGLXPKGSPSRNSRRPEPNPGPRGGLEIVFNQQ 42

BLAST of MC04g0361 vs. ExPASy TrEMBL
Match: A0A6P4C744 (LOW QUALITY PROTEIN: uncharacterized protein LOC107467256 OS=Arachis duranensis OX=130453 GN=LOC107467256 PE=4 SV=1)

HSP 1 Score: 60.1 bits (144), Expect = 3.11e-11
Identity = 29/34 (85.29%), Postives = 29/34 (85.29%), Query Frame = 0

Query: 1  IVGLYPEGSPSRNSLGHGPNPGPRGGLEIVFNQQ 34
          IVGLYP GSPSRNS   GPNPG RGGLEIVFNQQ
Sbjct: 8  IVGLYPXGSPSRNSQRPGPNPGLRGGLEIVFNQQ 41

BLAST of MC04g0361 vs. ExPASy TrEMBL
Match: A0A6J1CQV3 (LOW QUALITY PROTEIN: uncharacterized protein LOC111013914 OS=Momordica charantia OX=3673 GN=LOC111013914 PE=4 SV=1)

HSP 1 Score: 58.5 bits (140), Expect = 2.51e-10
Identity = 28/34 (82.35%), Postives = 29/34 (85.29%), Query Frame = 0

Query: 1  IVGLYPEGSPSRNSLGHGPNPGPRGGLEIVFNQQ 34
          IVGL P+GSPSRNS    PNPGPRGGLEIVFNQQ
Sbjct: 9  IVGLXPKGSPSRNSRRPEPNPGPRGGLEIVFNQQ 42

BLAST of MC04g0361 vs. ExPASy TrEMBL
Match: A0A6P6UF14 (uncharacterized protein LOC113710315 OS=Coffea arabica OX=13443 GN=LOC113710315 PE=4 SV=1)

HSP 1 Score: 57.8 bits (138), Expect = 2.90e-10
Identity = 28/34 (82.35%), Postives = 29/34 (85.29%), Query Frame = 0

Query: 1  IVGLYPEGSPSRNSLGHGPNPGPRGGLEIVFNQQ 34
          IVGLYPEGSPSRNS    P+PG RGGLEIVFNQQ
Sbjct: 14 IVGLYPEGSPSRNSQCPRPSPGQRGGLEIVFNQQ 47

BLAST of MC04g0361 vs. ExPASy TrEMBL
Match: A0A5D2AWM3 (Uncharacterized protein OS=Gossypium darwinii OX=34276 GN=ES288_1Z042600v1 PE=4 SV=1)

HSP 1 Score: 56.6 bits (135), Expect = 6.73e-10
Identity = 27/34 (79.41%), Postives = 28/34 (82.35%), Query Frame = 0

Query: 1  IVGLYPEGSPSRNSLGHGPNPGPRGGLEIVFNQQ 34
          IVG YPEG+PSRNS   G NPG RGGLEIVFNQQ
Sbjct: 3  IVGFYPEGNPSRNSQRPGQNPGLRGGLEIVFNQQ 36

BLAST of MC04g0361 vs. ExPASy TrEMBL
Match: A0A5J5NDD5 (Uncharacterized protein OS=Gossypium barbadense OX=3634 GN=ES319_1Z085100v1 PE=4 SV=1)

HSP 1 Score: 56.6 bits (135), Expect = 6.73e-10
Identity = 27/34 (79.41%), Postives = 28/34 (82.35%), Query Frame = 0

Query: 1  IVGLYPEGSPSRNSLGHGPNPGPRGGLEIVFNQQ 34
          IVG YPEG+PSRNS   G NPG RGGLEIVFNQQ
Sbjct: 3  IVGFYPEGNPSRNSQRPGQNPGLRGGLEIVFNQQ 36

BLAST of MC04g0361 vs. TAIR 10
Match: AT3G06895.1 (unknown protein; Has 2 Blast hits to 2 proteins in 1 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 2; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). )

HSP 1 Score: 50.8 bits (120), Expect = 2.5e-07
Identity = 25/34 (73.53%), Postives = 27/34 (79.41%), Query Frame = 0

Query: 1  IVGLYPEGSPSRNSLGHGPNPGPRGGLEIVFNQQ 35
          IVGLYP+GSPSRNS     + GP GGLEIVFNQQ
Sbjct: 18 IVGLYPKGSPSRNSRRPKTSLGPGGGLEIVFNQQ 51

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
XP_028788419.16.19e-1287.88uncharacterized protein LOC114744414 [Prosopis alba][more]
XP_015941779.16.42e-1185.29LOW QUALITY PROTEIN: uncharacterized protein LOC107467256 [Arachis duranensis][more]
XP_024164334.12.90e-1085.71LOW QUALITY PROTEIN: uncharacterized protein LOC112171368 [Rosa chinensis][more]
XP_024025392.15.03e-1082.35uncharacterized protein LOC112092745 [Morus notabilis][more]
XP_022144155.15.18e-1082.35LOW QUALITY PROTEIN: uncharacterized protein LOC111013914 [Momordica charantia][more]
Match NameE-valueIdentityDescription
A0A6P4C7443.11e-1185.29LOW QUALITY PROTEIN: uncharacterized protein LOC107467256 OS=Arachis duranensis ... [more]
A0A6J1CQV32.51e-1082.35LOW QUALITY PROTEIN: uncharacterized protein LOC111013914 OS=Momordica charantia... [more]
A0A6P6UF142.90e-1082.35uncharacterized protein LOC113710315 OS=Coffea arabica OX=13443 GN=LOC113710315 ... [more]
A0A5D2AWM36.73e-1079.41Uncharacterized protein OS=Gossypium darwinii OX=34276 GN=ES288_1Z042600v1 PE=4 ... [more]
A0A5J5NDD56.73e-1079.41Uncharacterized protein OS=Gossypium barbadense OX=3634 GN=ES319_1Z085100v1 PE=4... [more]
Match NameE-valueIdentityDescription
AT3G06895.12.5e-0773.53unknown protein; Has 2 Blast hits to 2 proteins in 1 species: Archae - 0; Bacter... [more]
InterPro
Analysis Name: InterPro Annotations of Bitter gourd (Dali-11) v1
Date Performed: 2021-10-25
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1..34

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
MC04g0361.1MC04g0361.1mRNA