Sequences
The following sequences are available for this feature:
Gene sequence (with intron)
Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGTGTTATGTGGGCAAAGCAACTAAGATCTTCATCTTCATTGTCACCGTTTTGGTGGTTCTTGGCCTTGTTCTTGGCTTTGGATTTTTGCGCCACGGCCTCCAGAAATCCCATAAGTGCTCCGGAAACTCCTGTTTTTCCCCTCCAGACGTCTTCCCGGACCCCAATTCCGCCCCTCCCGGCGGCGCCGCTCCAATCTCCGCCTCCAACCAGCCGGGAAATTCACCAACGCCAACCGATTCGAATCCGAACCCACCTCCGCAAAATCCGATTCCGGCTACTCCGCCTCCGCCTGACGCCGTTACGGCTTCTCCACCTCCGCCTGATACCATCGTTAATCCCTTACCGCCGCCGCCACAGGGATATCAGTCTCCACCTCCGCCAGTAACCGAAGCGCCGCCGCCGTTTACCCCGCCTAGTACGACGCCGGTGACTCCGGGTCCGATGCATTCTCAGCTACGGTCCTCGATTCGTAAGAGGGATGAGAATTTC
mRNA sequence
ATGTGTTATGTGGGCAAAGCAACTAAGATCTTCATCTTCATTGTCACCGTTTTGGTGGTTCTTGGCCTTGTTCTTGGCTTTGGATTTTTGCGCCACGGCCTCCAGAAATCCCATAAGTGCTCCGGAAACTCCTGTTTTTCCCCTCCAGACGTCTTCCCGGACCCCAATTCCGCCCCTCCCGGCGGCGCCGCTCCAATCTCCGCCTCCAACCAGCCGGGAAATTCACCAACGCCAACCGATTCGAATCCGAACCCACCTCCGCAAAATCCGATTCCGGCTACTCCGCCTCCGCCTGACGCCGTTACGGCTTCTCCACCTCCGCCTGATACCATCGTTAATCCCTTACCGCCGCCGCCACAGGGATATCAGTCTCCACCTCCGCCAGTAACCGAAGCGCCGCCGCCGTTTACCCCGCCTAGTACGACGCCGGTGACTCCGGGTCCGATGCATTCTCAGCTACGGTCCTCGATTCGTAAGAGGGATGAGAATTTC
Coding sequence (CDS)
ATGTGTTATGTGGGCAAAGCAACTAAGATCTTCATCTTCATTGTCACCGTTTTGGTGGTTCTTGGCCTTGTTCTTGGCTTTGGATTTTTGCGCCACGGCCTCCAGAAATCCCATAAGTGCTCCGGAAACTCCTGTTTTTCCCCTCCAGACGTCTTCCCGGACCCCAATTCCGCCCCTCCCGGCGGCGCCGCTCCAATCTCCGCCTCCAACCAGCCGGGAAATTCACCAACGCCAACCGATTCGAATCCGAACCCACCTCCGCAAAATCCGATTCCGGCTACTCCGCCTCCGCCTGACGCCGTTACGGCTTCTCCACCTCCGCCTGATACCATCGTTAATCCCTTACCGCCGCCGCCACAGGGATATCAGTCTCCACCTCCGCCAGTAACCGAAGCGCCGCCGCCGTTTACCCCGCCTAGTACGACGCCGGTGACTCCGGGTCCGATGCATTCTCAGCTACGGTCCTCGATTCGTAAGAGGGATGAGAATTTC
Protein sequence
MCYVGKATKIFIFIVTVLVVLGLVLGFGFLRHGLQKSHKCSGNSCFSPPDVFPDPNSAPPGGAAPISASNQPGNSPTPTDSNPNPPPQNPIPATPPPPDAVTASPPPPDTIVNPLPPPPQGYQSPPPPVTEAPPPFTPPSTTPVTPGPMHSQLRSSIRKRDENF
Homology
BLAST of MC04g0180 vs. NCBI nr
Match:
XP_022135895.1 (proline-rich receptor-like protein kinase PERK2 [Momordica charantia])
HSP 1 Score: 301 bits (770), Expect = 2.11e-102
Identity = 164/168 (97.62%), Postives = 164/168 (97.62%), Query Frame = 0
Query: 1 MCYVGKATKIFIFIVTVLVVLGLVLGFGFLRHGLQKSHKCSGNSCFSPPDVFPDPNSAPP 60
MCYVGKATKIFIFIVTVLVVLGLVLGFGFLRHGLQKSHKCSGNSCFSPPDVFPDPNSAPP
Sbjct: 1 MCYVGKATKIFIFIVTVLVVLGLVLGFGFLRHGLQKSHKCSGNSCFSPPDVFPDPNSAPP 60
Query: 61 GGAAPISASNQPGNSPTPTDSNPNPPPQNPIPATPPPPDAVTASPPPPDTIVNPLPPPP- 120
GGAAPISASNQPGNSPTPTDSNPNPPPQNPIPATPPPPDAVTASPPPPDTIVNPLPPPP
Sbjct: 61 GGAAPISASNQPGNSPTPTDSNPNPPPQNPIPATPPPPDAVTASPPPPDTIVNPLPPPPP 120
Query: 121 ---QGYQSPPPPVTEAPPPFTPPSTTPVTPGPMHSQLRSSIRKRDENF 164
QGYQSPPPPVTEAPPPFTPPSTTPVTPGPMHSQLRSSIRKRDENF
Sbjct: 121 PPPQGYQSPPPPVTEAPPPFTPPSTTPVTPGPMHSQLRSSIRKRDENF 168
BLAST of MC04g0180 vs. NCBI nr
Match:
XP_022953003.1 (sulfated surface glycoprotein 185-like [Cucurbita moschata])
HSP 1 Score: 236 bits (602), Expect = 1.13e-76
Identity = 137/177 (77.40%), Postives = 145/177 (81.92%), Query Frame = 0
Query: 1 MCYVGKATKIFIFIVTVLVVLGLVLGFGFLRHGLQKSHKCSGNSCFSPPDVFPDPNSAPP 60
MCYVGKATKIFIFIVTVLVVLGLVLGFGF+RHGLQKSHKCSGNSCFSPP VFP+PNSA P
Sbjct: 1 MCYVGKATKIFIFIVTVLVVLGLVLGFGFMRHGLQKSHKCSGNSCFSPPVVFPNPNSATP 60
Query: 61 GGAAPISASNQPGNSPTPTDSNPNPPPQNPIPA----------TPPPPDAVTASPPPPDT 120
GGAAPISASNQP N P P DSNPNPPPQNPIPA +PPPPD + +PPPPDT
Sbjct: 61 GGAAPISASNQPQNPPNPPDSNPNPPPQNPIPAFPPPSEATPASPPPPDVIPTTPPPPDT 120
Query: 121 IVNPLPPPPQ---GYQSPPPPVTEAPPPFTPPSTTPVTPGPMHSQLRSSIRKRDENF 164
I NPLPPPP QSPPPP TEA PP TPPSTTPV+PGPMH QLRSSIRK ++ F
Sbjct: 121 IPNPLPPPPPLLPASQSPPPPETEASPPLTPPSTTPVSPGPMHVQLRSSIRKTNKKF 177
BLAST of MC04g0180 vs. NCBI nr
Match:
XP_023511649.1 (vegetative cell wall protein gp1-like [Cucurbita pepo subsp. pepo])
HSP 1 Score: 231 bits (589), Expect = 2.09e-74
Identity = 139/197 (70.56%), Postives = 145/197 (73.60%), Query Frame = 0
Query: 1 MCYVGKATKIFIFIVTVLVVLGLVLGFGFLRHGLQKSHKCSGNSCFSPPDVFPDPNSAPP 60
MCYVGKATKIFIFIVTVLVVLGLVLGFGF+RHGLQKSHKCSGNSCFSPP VFP+PNSA P
Sbjct: 1 MCYVGKATKIFIFIVTVLVVLGLVLGFGFMRHGLQKSHKCSGNSCFSPPVVFPNPNSATP 60
Query: 61 GGAAPISASNQPGNSPTPTDSNPNPPPQNPIPA--------------------------- 120
GGAAPISASNQP N P P DSNPNPPPQNPIPA
Sbjct: 61 GGAAPISASNQPQNPPNPPDSNPNPPPQNPIPAFPPPSDATPAFPPPSDATPASPPPPDV 120
Query: 121 ---TPPPPDAVTASPPPPDTIVNPLPPPPQ---GYQSPPPPVTEAPPPFTPPSTTPVTPG 164
TPPPPD + SPPPPDTI NPLPPPP QSPPPP TEA PP TPPSTTPV+PG
Sbjct: 121 IPTTPPPPDVIPTSPPPPDTIPNPLPPPPPLLPASQSPPPPETEASPPLTPPSTTPVSPG 180
BLAST of MC04g0180 vs. NCBI nr
Match:
KAG6572312.1 (hypothetical protein SDJN03_29040, partial [Cucurbita argyrosperma subsp. sororia] >KAG7011923.1 hypothetical protein SDJN02_26831, partial [Cucurbita argyrosperma subsp. argyrosperma])
HSP 1 Score: 226 bits (576), Expect = 2.12e-72
Identity = 139/199 (69.85%), Postives = 145/199 (72.86%), Query Frame = 0
Query: 1 MCYVGKATKIFIFIVTVLVVLGLVLGFGFLRHGLQKSHKCSGNSCFSPPDVFPDPNSAPP 60
MCYVGKATKIFIFIVTVLVVLGLVLGFGF+RHGLQKSHKCSGNSCFSPP VFP+PNSA P
Sbjct: 1 MCYVGKATKIFIFIVTVLVVLGLVLGFGFMRHGLQKSHKCSGNSCFSPPVVFPNPNSATP 60
Query: 61 GGAAPISASNQPGNSPTPTDSN--PNPPPQNPIPA------------------------- 120
GGAAPISASNQP N P P DSN PNPPPQNPIPA
Sbjct: 61 GGAAPISASNQPQNPPNPPDSNSNPNPPPQNPIPAFPPPSDATPAFPPPSDVTPASPPPP 120
Query: 121 -----TPPPPDAVTASPPPPDTIVNPLPPPPQ---GYQSPPPPVTEAPPPFTPPSTTPVT 164
TPPPPD + SPPPPDTI NPLPPPP QSPPPP TEA PP TPPSTTPV+
Sbjct: 121 DVIPTTPPPPDVIPTSPPPPDTIPNPLPPPPPLLPASQSPPPPETEASPPLTPPSTTPVS 180
BLAST of MC04g0180 vs. NCBI nr
Match:
XP_022968881.1 (vegetative cell wall protein gp1-like [Cucurbita maxima])
HSP 1 Score: 226 bits (575), Expect = 2.47e-72
Identity = 137/194 (70.62%), Postives = 143/194 (73.71%), Query Frame = 0
Query: 1 MCYVGKATKIFIFIVTVLVVLGLVLGFGFLRHGLQKSHKCSGNSCFSPPDVFPDPNSAPP 60
MCYVGKATKIFIFIVTVLVVLGLVLGFGF+RHGLQKSHKCSGNSCFSPP VFP+PNSA P
Sbjct: 1 MCYVGKATKIFIFIVTVLVVLGLVLGFGFMRHGLQKSHKCSGNSCFSPPVVFPNPNSATP 60
Query: 61 GGAAPISASNQPGNSPTPTDSNPNPPPQNPIPATPPP----------------------- 120
GGAAPISASNQP N P P DSNPNPPPQNPIPA PPP
Sbjct: 61 GGAAPISASNQPQNPPNPPDSNPNPPPQNPIPAFPPPSEATPAFPPPSDATPASPPPPDV 120
Query: 121 -------PDAVTASPPPPDTIVNPLPPPPQGYQSPPPPVTEAPPPFTPPSTTPVTPGPMH 164
PD + SPPPPDTI NPLPP P QSPPPP TEA PP TPPSTTPV+PGPMH
Sbjct: 121 IPTTPPSPDVIPTSPPPPDTIPNPLPPLPAS-QSPPPPETEASPPLTPPSTTPVSPGPMH 180
BLAST of MC04g0180 vs. ExPASy TrEMBL
Match:
A0A6J1C2B8 (proline-rich receptor-like protein kinase PERK2 OS=Momordica charantia OX=3673 GN=LOC111007732 PE=4 SV=1)
HSP 1 Score: 301 bits (770), Expect = 1.02e-102
Identity = 164/168 (97.62%), Postives = 164/168 (97.62%), Query Frame = 0
Query: 1 MCYVGKATKIFIFIVTVLVVLGLVLGFGFLRHGLQKSHKCSGNSCFSPPDVFPDPNSAPP 60
MCYVGKATKIFIFIVTVLVVLGLVLGFGFLRHGLQKSHKCSGNSCFSPPDVFPDPNSAPP
Sbjct: 1 MCYVGKATKIFIFIVTVLVVLGLVLGFGFLRHGLQKSHKCSGNSCFSPPDVFPDPNSAPP 60
Query: 61 GGAAPISASNQPGNSPTPTDSNPNPPPQNPIPATPPPPDAVTASPPPPDTIVNPLPPPP- 120
GGAAPISASNQPGNSPTPTDSNPNPPPQNPIPATPPPPDAVTASPPPPDTIVNPLPPPP
Sbjct: 61 GGAAPISASNQPGNSPTPTDSNPNPPPQNPIPATPPPPDAVTASPPPPDTIVNPLPPPPP 120
Query: 121 ---QGYQSPPPPVTEAPPPFTPPSTTPVTPGPMHSQLRSSIRKRDENF 164
QGYQSPPPPVTEAPPPFTPPSTTPVTPGPMHSQLRSSIRKRDENF
Sbjct: 121 PPPQGYQSPPPPVTEAPPPFTPPSTTPVTPGPMHSQLRSSIRKRDENF 168
BLAST of MC04g0180 vs. ExPASy TrEMBL
Match:
A0A6J1GM63 (sulfated surface glycoprotein 185-like OS=Cucurbita moschata OX=3662 GN=LOC111455518 PE=4 SV=1)
HSP 1 Score: 236 bits (602), Expect = 5.48e-77
Identity = 137/177 (77.40%), Postives = 145/177 (81.92%), Query Frame = 0
Query: 1 MCYVGKATKIFIFIVTVLVVLGLVLGFGFLRHGLQKSHKCSGNSCFSPPDVFPDPNSAPP 60
MCYVGKATKIFIFIVTVLVVLGLVLGFGF+RHGLQKSHKCSGNSCFSPP VFP+PNSA P
Sbjct: 1 MCYVGKATKIFIFIVTVLVVLGLVLGFGFMRHGLQKSHKCSGNSCFSPPVVFPNPNSATP 60
Query: 61 GGAAPISASNQPGNSPTPTDSNPNPPPQNPIPA----------TPPPPDAVTASPPPPDT 120
GGAAPISASNQP N P P DSNPNPPPQNPIPA +PPPPD + +PPPPDT
Sbjct: 61 GGAAPISASNQPQNPPNPPDSNPNPPPQNPIPAFPPPSEATPASPPPPDVIPTTPPPPDT 120
Query: 121 IVNPLPPPPQ---GYQSPPPPVTEAPPPFTPPSTTPVTPGPMHSQLRSSIRKRDENF 164
I NPLPPPP QSPPPP TEA PP TPPSTTPV+PGPMH QLRSSIRK ++ F
Sbjct: 121 IPNPLPPPPPLLPASQSPPPPETEASPPLTPPSTTPVSPGPMHVQLRSSIRKTNKKF 177
BLAST of MC04g0180 vs. ExPASy TrEMBL
Match:
A0A6J1HW34 (vegetative cell wall protein gp1-like OS=Cucurbita maxima OX=3661 GN=LOC111468063 PE=4 SV=1)
HSP 1 Score: 226 bits (575), Expect = 1.20e-72
Identity = 137/194 (70.62%), Postives = 143/194 (73.71%), Query Frame = 0
Query: 1 MCYVGKATKIFIFIVTVLVVLGLVLGFGFLRHGLQKSHKCSGNSCFSPPDVFPDPNSAPP 60
MCYVGKATKIFIFIVTVLVVLGLVLGFGF+RHGLQKSHKCSGNSCFSPP VFP+PNSA P
Sbjct: 1 MCYVGKATKIFIFIVTVLVVLGLVLGFGFMRHGLQKSHKCSGNSCFSPPVVFPNPNSATP 60
Query: 61 GGAAPISASNQPGNSPTPTDSNPNPPPQNPIPATPPP----------------------- 120
GGAAPISASNQP N P P DSNPNPPPQNPIPA PPP
Sbjct: 61 GGAAPISASNQPQNPPNPPDSNPNPPPQNPIPAFPPPSEATPAFPPPSDATPASPPPPDV 120
Query: 121 -------PDAVTASPPPPDTIVNPLPPPPQGYQSPPPPVTEAPPPFTPPSTTPVTPGPMH 164
PD + SPPPPDTI NPLPP P QSPPPP TEA PP TPPSTTPV+PGPMH
Sbjct: 121 IPTTPPSPDVIPTSPPPPDTIPNPLPPLPAS-QSPPPPETEASPPLTPPSTTPVSPGPMH 180
BLAST of MC04g0180 vs. ExPASy TrEMBL
Match:
A0A0A0K5L2 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_7G044870 PE=4 SV=1)
HSP 1 Score: 205 bits (522), Expect = 1.37e-64
Identity = 127/194 (65.46%), Postives = 140/194 (72.16%), Query Frame = 0
Query: 1 MCYVGKATKIFIFIVTVLVVLGLVLGFGFLRHGLQKSHKCSGNSCFSPPDVFPDPNSAPP 60
MCYVGKATKIFIFIVTVLVVLGLVLGFGF+RHGLQKSHKCSGNSCFSPP VF +PNSA P
Sbjct: 1 MCYVGKATKIFIFIVTVLVVLGLVLGFGFMRHGLQKSHKCSGNSCFSPPAVFSNPNSATP 60
Query: 61 GGAAPISASNQPGNSPTPTDSNPNPPPQNPIPA--------------------------- 120
G A+PISASNQP N P P+ SNPNPPPQN IPA
Sbjct: 61 G-ASPISASNQPQNPPNPSYSNPNPPPQNSIPAFPPPSDATSASPPPPDATPASPPPPDV 120
Query: 121 ---TPPPPDAVTASPPPPDTIVNPLPPPPQGYQSPPPPVTEAPPPFTPPSTTPVTPGPMH 164
+PPPPD + SPPPPDTI NPLPPPP QSP PP T+A P TPPSTT V+PGPMH
Sbjct: 121 IPTSPPPPDTIPISPPPPDTIQNPLPPPPPASQSPSPPETQAASPLTPPSTTLVSPGPMH 180
BLAST of MC04g0180 vs. ExPASy TrEMBL
Match:
A0A5A7TDU9 (Proline-rich receptor-like protein kinase PERK10 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold13G004000 PE=4 SV=1)
HSP 1 Score: 203 bits (516), Expect = 1.12e-63
Identity = 126/194 (64.95%), Postives = 139/194 (71.65%), Query Frame = 0
Query: 1 MCYVGKATKIFIFIVTVLVVLGLVLGFGFLRHGLQKSHKCSGNSCFSPPDVFPDPNSAPP 60
MCYVGKATKIFIFIVTVLVVLGLVLGFGF+RHGLQKSHKCSGNSCFSPP VF +PNSA P
Sbjct: 1 MCYVGKATKIFIFIVTVLVVLGLVLGFGFMRHGLQKSHKCSGNSCFSPPAVFSNPNSATP 60
Query: 61 GGAAPISASNQPGNSPTPTDSNPNPPPQNPIPA--------------------------- 120
G A+PISASNQP N P P+ SNPNPPPQN IPA
Sbjct: 61 G-ASPISASNQPQNPPNPSYSNPNPPPQNSIPAFPPPSDATPASPPPPDATPASQPPPDV 120
Query: 121 ---TPPPPDAVTASPPPPDTIVNPLPPPPQGYQSPPPPVTEAPPPFTPPSTTPVTPGPMH 164
+PPPPD + SPPPPDTI NPLPPPP QSP PP T+A P TPPSTT V+PGPMH
Sbjct: 121 IPTSPPPPDTIPISPPPPDTIQNPLPPPPPASQSPSPPETQAASPLTPPSTTLVSPGPMH 180
BLAST of MC04g0180 vs. TAIR 10
Match:
AT3G22070.1 (proline-rich family protein )
HSP 1 Score: 80.9 bits (198), Expect = 1.1e-15
Identity = 80/185 (43.24%), Postives = 101/185 (54.59%), Query Frame = 0
Query: 1 MCYVGKATKIFIFIVTVLVVLGLVLGFGFLRHGLQKSHKCSGNSCFSPPD---------- 60
+CYVGKATKIFIFIVTV+ V+GLV+ FG LR + SH CSG+ C S D
Sbjct: 2 LCYVGKATKIFIFIVTVVFVIGLVVAFGVLR---RHSHHCSGDYCSSSTDPSSSSSSSSS 61
Query: 61 -------VFPDPN-----------SAPPGGAAPISASNQPGNSPTPTDSNPNPPP---QN 120
FP+PN S+PP S+++ N P P NPNPPP N
Sbjct: 62 STSPFITPFPNPNPNPNPNPPVLGSSPPSPTDSSSSTSISPNPPAPI-VNPNPPPPSTPN 121
Query: 121 PIPA-TPPPPDAVTASPPPPDTIVNPLPPPPQGYQSPPPPVTEAPPPFTPPSTTPVTPGP 154
P P +PPPPD T + PPP + P+PPP PP PV+ A PP TPPS+ +P P
Sbjct: 122 PPPEFSPPPPDLDTTTAPPPPSTDIPIPPP------PPAPVS-ASPPLTPPSSVVTSPAP 175
The following BLAST results are available for this feature:
Match Name | E-value | Identity | Description | |
Match Name | E-value | Identity | Description | |
XP_022135895.1 | 2.11e-102 | 97.62 | proline-rich receptor-like protein kinase PERK2 [Momordica charantia] | [more] |
XP_022953003.1 | 1.13e-76 | 77.40 | sulfated surface glycoprotein 185-like [Cucurbita moschata] | [more] |
XP_023511649.1 | 2.09e-74 | 70.56 | vegetative cell wall protein gp1-like [Cucurbita pepo subsp. pepo] | [more] |
KAG6572312.1 | 2.12e-72 | 69.85 | hypothetical protein SDJN03_29040, partial [Cucurbita argyrosperma subsp. sorori... | [more] |
XP_022968881.1 | 2.47e-72 | 70.62 | vegetative cell wall protein gp1-like [Cucurbita maxima] | [more] |
Match Name | E-value | Identity | Description | |
A0A6J1C2B8 | 1.02e-102 | 97.62 | proline-rich receptor-like protein kinase PERK2 OS=Momordica charantia OX=3673 G... | [more] |
A0A6J1GM63 | 5.48e-77 | 77.40 | sulfated surface glycoprotein 185-like OS=Cucurbita moschata OX=3662 GN=LOC11145... | [more] |
A0A6J1HW34 | 1.20e-72 | 70.62 | vegetative cell wall protein gp1-like OS=Cucurbita maxima OX=3661 GN=LOC11146806... | [more] |
A0A0A0K5L2 | 1.37e-64 | 65.46 | Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_7G044870 PE=4 SV=1 | [more] |
A0A5A7TDU9 | 1.12e-63 | 64.95 | Proline-rich receptor-like protein kinase PERK10 OS=Cucumis melo var. makuwa OX=... | [more] |
Match Name | E-value | Identity | Description | |
AT3G22070.1 | 1.1e-15 | 43.24 | proline-rich family protein | [more] |