MC04g0159 (gene) Bitter gourd (Dali-11) v1

Overview


Name	MC04g0159
Type	gene
Organism	Momordica charantia cv. Dali-11 (Bitter gourd (Dali-11) v1)
Description	Wound-responsive family protein
Location	MC04: 1238866 .. 1239141 (-)
RNA-Seq Expression	MC04g0159
Synteny	MC04g0159

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGAGTTGCCTGAACAGAGTGGGGATGGCGGCGAGCGTGGCTGTGGCTCAAGGCCACACGGAGATCGGGCATAAGTGGAAATCTGGCCTTAAATCTCTCCGGCAAGGCAGGAGACTTTTGTCTTCCGGTGAAAATCCGGCGGATCTCCGGCCACTGTCCAGTTTGATGGGATCGGAAGGCCCCGGAGCCGTCCAGAACTGTGACGCCGGCGACAGGAGGGCGCAAACCGAGGATTCGCTCCGGCGAGTCATGTACTTGAACTGTTGGGGCCAGGGT

mRNA sequence

ATGAGTTGCCTGAACAGAGTGGGGATGGCGGCGAGCGTGGCTGTGGCTCAAGGCCACACGGAGATCGGGCATAAGTGGAAATCTGGCCTTAAATCTCTCCGGCAAGGCAGGAGACTTTTGTCTTCCGGTGAAAATCCGGCGGATCTCCGGCCACTGTCCAGTTTGATGGGATCGGAAGGCCCCGGAGCCGTCCAGAACTGTGACGCCGGCGACAGGAGGGCGCAAACCGAGGATTCGCTCCGGCGAGTCATGTACTTGAACTGTTGGGGCCAGGGT

Coding sequence (CDS)

ATGAGTTGCCTGAACAGAGTGGGGATGGCGGCGAGCGTGGCTGTGGCTCAAGGCCACACGGAGATCGGGCATAAGTGGAAATCTGGCCTTAAATCTCTCCGGCAAGGCAGGAGACTTTTGTCTTCCGGTGAAAATCCGGCGGATCTCCGGCCACTGTCCAGTTTGATGGGATCGGAAGGCCCCGGAGCCGTCCAGAACTGTGACGCCGGCGACAGGAGGGCGCAAACCGAGGATTCGCTCCGGCGAGTCATGTACTTGAACTGTTGGGGCCAGGGT

Protein sequence

MSCLNRVGMAASVAVAQGHTEIGHKWKSGLKSLRQGRRLLSSGENPADLRPLSSLMGSEGPGAVQNCDAGDRRAQTEDSLRRVMYLNCWGQG

Homology

[Close]

BLAST of MC04g0159 vs. NCBI nr
Match: KAG6572339.1 (hypothetical protein SDJN03_29067, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 174 bits (440), Expect = 1.91e-54
Identity = 85/92 (92.39%), Postives = 88/92 (95.65%), Query Frame = 0


Query: 1  MSCLNRVGMAASVAVAQGHTEIGHKWKSGLKSLRQGRRLLSSGENPADLRPLSSLMGSEG 60
          MS LNRVGMAASVAVAQGHTEIGHKWKSGLKSLRQGRRLLSSGENPADLRPLSSL+GSEG
Sbjct: 1  MSYLNRVGMAASVAVAQGHTEIGHKWKSGLKSLRQGRRLLSSGENPADLRPLSSLVGSEG 60

Query: 61 PGAVQNCDAGDRRAQTEDSLRRVMYLNCWGQG 92
          PGAV+N DA +R AQTEDSLRRVMYLNCWGQG
Sbjct: 61 PGAVRNLDADERMAQTEDSLRRVMYLNCWGQG 92

[Close]

BLAST of MC04g0159 vs. NCBI nr
Match: KAG7011951.1 (hypothetical protein SDJN02_26859, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 172 bits (435), Expect = 1.11e-53
Identity = 84/92 (91.30%), Postives = 88/92 (95.65%), Query Frame = 0


Query: 1  MSCLNRVGMAASVAVAQGHTEIGHKWKSGLKSLRQGRRLLSSGENPADLRPLSSLMGSEG 60
          MS LNRVGMAASVAVAQGHTEIGHKWKSGLKSLRQGRRLLSSGENPADLRPLSSL+GSEG
Sbjct: 1  MSYLNRVGMAASVAVAQGHTEIGHKWKSGLKSLRQGRRLLSSGENPADLRPLSSLVGSEG 60

Query: 61 PGAVQNCDAGDRRAQTEDSLRRVMYLNCWGQG 92
          PGAV++ DA +R AQTEDSLRRVMYLNCWGQG
Sbjct: 61 PGAVRSLDADERMAQTEDSLRRVMYLNCWGQG 92

[Close]

BLAST of MC04g0159 vs. NCBI nr
Match: KAA0031600.1 (wound-responsive family protein [Cucumis melo var. makuwa] >TYK07052.1 wound-responsive family protein [Cucumis melo var. makuwa])

HSP 1 Score: 164 bits (416), Expect = 8.76e-51
Identity = 80/92 (86.96%), Postives = 86/92 (93.48%), Query Frame = 0


Query: 1  MSCLNRVGMAASVAVAQGHTEIGHKWKSGLKSLRQGRRLLSSGENPADLRPLSSLMGSEG 60
          MS LNRVGMAASVAVAQGHTEIGHKWKSGLKSLRQGRRLLSSGEN ADLRPLSSL+GSEG
Sbjct: 1  MSYLNRVGMAASVAVAQGHTEIGHKWKSGLKSLRQGRRLLSSGENSADLRPLSSLVGSEG 60

Query: 61 PGAVQNCDAGDRRAQTEDSLRRVMYLNCWGQG 92
           G+V++CD  +R AQ+EDSLRRVMYLNCWGQG
Sbjct: 61 SGSVRSCDVDERIAQSEDSLRRVMYLNCWGQG 92

[Close]

BLAST of MC04g0159 vs. NCBI nr
Match: KAG6589197.1 (hypothetical protein SDJN03_17762, partial [Cucurbita argyrosperma subsp. sororia] >KAG7022897.1 hypothetical protein SDJN02_16633, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 164 bits (414), Expect = 1.77e-50
Identity = 80/92 (86.96%), Postives = 86/92 (93.48%), Query Frame = 0


Query: 1  MSCLNRVGMAASVAVAQGHTEIGHKWKSGLKSLRQGRRLLSSGENPADLRPLSSLMGSEG 60
          MS LNRVGMAASVAVAQGHTEIGHKWKSGLKS RQGR+LLSSGENPADLRPLSSL+GSEG
Sbjct: 1  MSYLNRVGMAASVAVAQGHTEIGHKWKSGLKSFRQGRKLLSSGENPADLRPLSSLVGSEG 60

Query: 61 PGAVQNCDAGDRRAQTEDSLRRVMYLNCWGQG 92
          P AVQ+ DA +R AQ+E+SLRRVMYLNCWGQG
Sbjct: 61 PEAVQSFDAAERIAQSEESLRRVMYLNCWGQG 92

[Close]

BLAST of MC04g0159 vs. NCBI nr
Match: KAE8645762.1 (hypothetical protein Csa_020269 [Cucumis sativus])

HSP 1 Score: 164 bits (416), Expect = 4.59e-50
Identity = 80/92 (86.96%), Postives = 86/92 (93.48%), Query Frame = 0


Query: 1  MSCLNRVGMAASVAVAQGHTEIGHKWKSGLKSLRQGRRLLSSGENPADLRPLSSLMGSEG 60
          MS LNRVGMAASVAVAQGHTEIGHKWKSGLKSLRQGRRLLSSGEN ADLRPLSSL+GSEG
Sbjct: 1  MSYLNRVGMAASVAVAQGHTEIGHKWKSGLKSLRQGRRLLSSGENSADLRPLSSLVGSEG 60

Query: 61 PGAVQNCDAGDRRAQTEDSLRRVMYLNCWGQG 92
           G+V++CD  +R AQ+EDSLRRVMYLNCWGQG
Sbjct: 61 SGSVRSCDVDERIAQSEDSLRRVMYLNCWGQG 92

[Close]

BLAST of MC04g0159 vs. ExPASy TrEMBL
Match: A0A5A7SLJ2 (Wound-responsive family protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold13G003700 PE=4 SV=1)

HSP 1 Score: 164 bits (416), Expect = 4.24e-51
Identity = 80/92 (86.96%), Postives = 86/92 (93.48%), Query Frame = 0


Query: 1  MSCLNRVGMAASVAVAQGHTEIGHKWKSGLKSLRQGRRLLSSGENPADLRPLSSLMGSEG 60
          MS LNRVGMAASVAVAQGHTEIGHKWKSGLKSLRQGRRLLSSGEN ADLRPLSSL+GSEG
Sbjct: 1  MSYLNRVGMAASVAVAQGHTEIGHKWKSGLKSLRQGRRLLSSGENSADLRPLSSLVGSEG 60

Query: 61 PGAVQNCDAGDRRAQTEDSLRRVMYLNCWGQG 92
           G+V++CD  +R AQ+EDSLRRVMYLNCWGQG
Sbjct: 61 SGSVRSCDVDERIAQSEDSLRRVMYLNCWGQG 92

[Close]

BLAST of MC04g0159 vs. ExPASy TrEMBL
Match: A0A0A0K6Z3 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_7G046690 PE=4 SV=1)

HSP 1 Score: 164 bits (416), Expect = 4.24e-51
Identity = 80/92 (86.96%), Postives = 86/92 (93.48%), Query Frame = 0


Query: 1  MSCLNRVGMAASVAVAQGHTEIGHKWKSGLKSLRQGRRLLSSGENPADLRPLSSLMGSEG 60
          MS LNRVGMAASVAVAQGHTEIGHKWKSGLKSLRQGRRLLSSGEN ADLRPLSSL+GSEG
Sbjct: 1  MSYLNRVGMAASVAVAQGHTEIGHKWKSGLKSLRQGRRLLSSGENSADLRPLSSLVGSEG 60

Query: 61 PGAVQNCDAGDRRAQTEDSLRRVMYLNCWGQG 92
           G+V++CD  +R AQ+EDSLRRVMYLNCWGQG
Sbjct: 61 SGSVRSCDVDERIAQSEDSLRRVMYLNCWGQG 92

[Close]

BLAST of MC04g0159 vs. ExPASy TrEMBL
Match: A0A6A1VB48 (Uncharacterized protein OS=Morella rubra OX=262757 GN=CJ030_MR6G020117 PE=4 SV=1)

HSP 1 Score: 112 bits (280), Expect = 2.31e-30
Identity = 55/92 (59.78%), Postives = 69/92 (75.00%), Query Frame = 0


Query: 1  MSCLNRVGMAASVAVAQGHTEIGHKWKSGLKSLRQGRRLLSSGENPADLRPLSSLMGSEG 60
          MS +NRV MAASVAV QGH + G K KSG+ SL+ GRR   SG + +D+RPLS +MGS+ 
Sbjct: 1  MSYINRVWMAASVAVVQGHRDQGCKLKSGVDSLQHGRRKFFSGNDSSDIRPLSGMMGSDL 60

Query: 61 PGAVQNCDAGDRRAQTEDSLRRVMYLNCWGQG 92
           G + N D+ +RR Q ++SLRRVMYLNCWGQG
Sbjct: 61 DGFLGNTDSDERRRQADESLRRVMYLNCWGQG 92

[Close]

BLAST of MC04g0159 vs. ExPASy TrEMBL
Match: A0A2N9HZV9 (Uncharacterized protein OS=Fagus sylvatica OX=28930 GN=FSB_LOCUS45844 PE=4 SV=1)

HSP 1 Score: 112 bits (280), Expect = 2.31e-30
Identity = 54/92 (58.70%), Postives = 69/92 (75.00%), Query Frame = 0


Query: 1  MSCLNRVGMAASVAVAQGHTEIGHKWKSGLKSLRQGRRLLSSGENPADLRPLSSLMGSEG 60
          MS LNRV MAA VAV QG T+ GHKWKSG+KS++  ++ L SG + +DLRPLS ++GS+ 
Sbjct: 1  MSYLNRVWMAAGVAVVQGKTDQGHKWKSGIKSVQLRKQKLFSGNDTSDLRPLSGMIGSDF 60

Query: 61 PGAVQNCDAGDRRAQTEDSLRRVMYLNCWGQG 92
           G + N DA +R    ++SLRRVMYLNCWGQG
Sbjct: 61 QGFLGNSDADERPMHADESLRRVMYLNCWGQG 92

[Close]

BLAST of MC04g0159 vs. ExPASy TrEMBL
Match: A0A5N6RB28 (Uncharacterized protein OS=Carpinus fangiana OX=176857 GN=FH972_014541 PE=4 SV=1)

HSP 1 Score: 110 bits (276), Expect = 9.38e-30
Identity = 55/92 (59.78%), Postives = 68/92 (73.91%), Query Frame = 0


Query: 1  MSCLNRVGMAASVAVAQGHTEIGHKWKSGLKSLRQGRRLLSSGENPADLRPLSSLMGSEG 60
          MS LNR+ MAASVAV QGHT+ G K K GLKSL+ G+R   SG + ADLRP+S ++G + 
Sbjct: 1  MSYLNRIWMAASVAVVQGHTDQGRKVKPGLKSLQLGKRKFFSGSDSADLRPISGMIGLDF 60

Query: 61 PGAVQNCDAGDRRAQTEDSLRRVMYLNCWGQG 92
           G + + DA +R  Q E+SLRRVMYLNCWGQG
Sbjct: 61 AGFLGSSDADERPRQAEESLRRVMYLNCWGQG 92

[Close]

BLAST of MC04g0159 vs. TAIR 10
Match: AT4G28240.1 (Wound-responsive family protein )

HSP 1 Score: 63.9 bits (154), Expect = 7.6e-11
Identity = 42/94 (44.68%), Postives = 55/94 (58.51%), Query Frame = 0


Query: 1  MSCLNRVGMAASVAVAQGHTEIGHKWKSGLKSLRQGRRLLSSGENPADLRPLSS--LMGS 60
          MS LN+V MAAS    QG+ + G K KSGL S  + +R LSS     DLRPL++  L G 
Sbjct: 1  MSYLNKVWMAASFVAVQGNADHGVKLKSGLTSAHRLQRRLSS-----DLRPLAAADLTGD 60

Query: 61 EGPGAVQNCDAGDRRAQTEDSLRRVMYLNCWGQG 93
            P   +   +    +  ++SLR+VMYLNCW QG
Sbjct: 61 SLPSEERRRTSS---STPDESLRQVMYLNCWAQG 86

The following BLAST results are available for this feature:

BLAST of MC04g0159 vs.


Match Name	E-value	Identity	Description

BLAST of MC04g0159 vs. NCBI nr


Match Name	E-value	Identity	Description
KAG6572339.1	1.91e-54	92.39	hypothetical protein SDJN03_29067, partial [Cucurbita argyrosperma subsp. sorori...	[more]
KAG7011951.1	1.11e-53	91.30	hypothetical protein SDJN02_26859, partial [Cucurbita argyrosperma subsp. argyro...	[more]
KAA0031600.1	8.76e-51	86.96	wound-responsive family protein [Cucumis melo var. makuwa] >TYK07052.1 wound-res...	[more]
KAG6589197.1	1.77e-50	86.96	hypothetical protein SDJN03_17762, partial [Cucurbita argyrosperma subsp. sorori...	[more]
KAE8645762.1	4.59e-50	86.96	hypothetical protein Csa_020269 [Cucumis sativus]	[more]

BLAST of MC04g0159 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5A7SLJ2	4.24e-51	86.96	Wound-responsive family protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_...	[more]
A0A0A0K6Z3	4.24e-51	86.96	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_7G046690 PE=4 SV=1	[more]
A0A6A1VB48	2.31e-30	59.78	Uncharacterized protein OS=Morella rubra OX=262757 GN=CJ030_MR6G020117 PE=4 SV=1	[more]
A0A2N9HZV9	2.31e-30	58.70	Uncharacterized protein OS=Fagus sylvatica OX=28930 GN=FSB_LOCUS45844 PE=4 SV=1	[more]
A0A5N6RB28	9.38e-30	59.78	Uncharacterized protein OS=Carpinus fangiana OX=176857 GN=FH972_014541 PE=4 SV=1	[more]

BLAST of MC04g0159 vs. TAIR 10


Match Name	E-value	Identity	Description
AT4G28240.1	7.6e-11	44.68	Wound-responsive family protein	[more]

InterPro

Analysis Name: InterPro Annotations of Bitter gourd (Dali-11) v1
Date Performed: 2021-10-25

Position :

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IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR022251	Protein of unknown function wound-induced	PFAM	PF12609	DUF3774	coord: 9..91 e-value: 4.9E-16 score: 59.5
IPR022251	Protein of unknown function wound-induced	PANTHER	PTHR33090	DUF3774 DOMAIN PROTEIN-RELATED	coord: 1..92
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 41..73
None	No IPR available	PANTHER	PTHR33090:SF38	DUF3774 DOMAIN PROTEIN	coord: 1..92

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
MC04g0159.1	MC04g0159.1	mRNA