MC04g0158 (gene) Bitter gourd (Dali-11) v1

Overview
NameMC04g0158
Typegene
OrganismMomordica charantia cv. Dali-11 (Bitter gourd (Dali-11) v1)
DescriptionUnknown protein
LocationMC04: 1225919 .. 1226011 (-)
RNA-Seq ExpressionMC04g0158
SyntenyMC04g0158
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
GGGGTGGAGAGAGATAGCGAGGTGGTTTGGGATCTCATTAGATTTAATGTTTCTTTATGGGGTTTTGTTTCGAAGATGTTTTGTAATTACCAG

mRNA sequence

GGGGTGGAGAGAGATAGCGAGGTGGTTTGGGATCTCATTAGATTTAATGTTTCTTTATGGGGTTTTGTTTCGAAGATGTTTTGTAATTACCAG

Coding sequence (CDS)

GGGGTGGAGAGAGATAGCGAGGTGGTTTGGGATCTCATTAGATTTAATGTTTCTTTATGGGGTTTTGTTTCGAAGATGTTTTGTAATTACCAG

Protein sequence

GVERDSEVVWDLIRFNVSLWGFVSKMFCNYQ
Homology
BLAST of MC04g0158 vs. NCBI nr
Match: XP_016900613.1 (PREDICTED: uncharacterized protein LOC107990976 [Cucumis melo])

HSP 1 Score: 44.7 bits (104), Expect = 6.88e-04
Identity = 17/30 (56.67%), Postives = 23/30 (76.67%), Query Frame = 0

Query: 1   GVERDSEVVWDLIRFNVSLWGFVSKMFCNY 30
           GVER +  +W +IR++VSLW  +SK FCNY
Sbjct: 130 GVERGTGEIWLVIRYHVSLWDSISKTFCNY 159

BLAST of MC04g0158 vs. ExPASy TrEMBL
Match: A0A1S4DXB1 (uncharacterized protein LOC107990976 OS=Cucumis melo OX=3656 GN=LOC107990976 PE=4 SV=1)

HSP 1 Score: 44.7 bits (104), Expect = 3.33e-04
Identity = 17/30 (56.67%), Postives = 23/30 (76.67%), Query Frame = 0

Query: 1   GVERDSEVVWDLIRFNVSLWGFVSKMFCNY 30
           GVER +  +W +IR++VSLW  +SK FCNY
Sbjct: 130 GVERGTGEIWLVIRYHVSLWDSISKTFCNY 159

BLAST of MC04g0158 vs. ExPASy TrEMBL
Match: A0A5D3D5D0 (Double-stranded RNA-binding protein 1 isoform X1 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold257G00620 PE=4 SV=1)

HSP 1 Score: 43.9 bits (102), Expect = 9.50e-04
Identity = 18/31 (58.06%), Postives = 21/31 (67.74%), Query Frame = 0

Query: 1  GVERDSEVVWDLIRFNVSLWGFVSKMFCNYQ 31
          G ERDS  VW L RF+V LW  + K+FCNY 
Sbjct: 16 GRERDSCEVWSLARFHVFLWVLILKIFCNYS 46

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
XP_016900613.16.88e-0456.67PREDICTED: uncharacterized protein LOC107990976 [Cucumis melo][more]
Match NameE-valueIdentityDescription
A0A1S4DXB13.33e-0456.67uncharacterized protein LOC107990976 OS=Cucumis melo OX=3656 GN=LOC107990976 PE=... [more]
A0A5D3D5D09.50e-0458.06Double-stranded RNA-binding protein 1 isoform X1 OS=Cucumis melo var. makuwa OX=... [more]
Match NameE-valueIdentityDescription
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
MC04g0158.1MC04g0158.1mRNA