MC04g0143 (gene) Bitter gourd (Dali-11) v1

Overview


Name	MC04g0143
Type	gene
Organism	Momordica charantia cv. Dali-11 (Bitter gourd (Dali-11) v1)
Description	E3 ubiquitin-protein ligase RMA1H1-like
Location	MC04: 1086297 .. 1086986 (+)
RNA-Seq Expression	MC04g0143
Synteny	MC04g0143

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

GAGCAATACTTTGAGGAGGCCAGTTTGCAGATTAATACCTTTGGAGAGAACAAGTCTTCTCTGGAAAATTGGAAGTCTGTTTTGGATGCCATGGCAGAAACTCATTGTGACACCTCTGGGCTCTTCGACTGTAACATATGCTTAGAGACTGTGAAAGATCCTGTCGTTACACTTTGTGGCCATCTCTTTTGCTGGCCCTGCATTTATAAATGGCTTCATTTTCAGGACAGCTCTACAGAAAAACAAGGCCAGCAACCTCAGCAATGTCCTGTTTGTAAGGCAGAAGTTTCTGATGCTACTCTAGTCCCACTCTATGGCAAAGGTGAAACTCAAGATCCTTTCGAAAGCAAGAATTCGCAGCTTGGAGTCGTCGTCCCTCGCAGGCCTCAGGGTCCTGGTTGCTCTGAGACATCAAGGCCTACCTCTCACTCAGCTCCTCAATTTCGGCGGGGAAATTCTTCTGATCAATCATCAAACAATTACTATGCTCAGATGACAGGAGTGTTTGGAGAGATGATCTACGCAAGAATGTTTGGTGCAATAACGAATCACTATGCATATCCCAACTCATACCCTCTTGTGTGGAGCAGTAGTCCTAGGATCAGAAGGCATATTTTGGCGACCGATGAATCACTCAACAGAATCTGTATTTTCCTTTTCTGTTTCTCAATTATCTGTCTTCTTTTGTTC

mRNA sequence

GAGCAATACTTTGAGGAGGCCAGTTTGCAGATTAATACCTTTGGAGAGAACAAGTCTTCTCTGGAAAATTGGAAGTCTGTTTTGGATGCCATGGCAGAAACTCATTGTGACACCTCTGGGCTCTTCGACTGTAACATATGCTTAGAGACTGTGAAAGATCCTGTCGTTACACTTTGTGGCCATCTCTTTTGCTGGCCCTGCATTTATAAATGGCTTCATTTTCAGGACAGCTCTACAGAAAAACAAGGCCAGCAACCTCAGCAATGTCCTGTTTGTAAGGCAGAAGTTTCTGATGCTACTCTAGTCCCACTCTATGGCAAAGGTGAAACTCAAGATCCTTTCGAAAGCAAGAATTCGCAGCTTGGAGTCGTCGTCCCTCGCAGGCCTCAGGGTCCTGGTTGCTCTGAGACATCAAGGCCTACCTCTCACTCAGCTCCTCAATTTCGGCGGGGAAATTCTTCTGATCAATCATCAAACAATTACTATGCTCAGATGACAGGAGTGTTTGGAGAGATGATCTACGCAAGAATGTTTGGTGCAATAACGAATCACTATGCATATCCCAACTCATACCCTCTTGTGTGGAGCAGTAGTCCTAGGATCAGAAGGCATATTTTGGCGACCGATGAATCACTCAACAGAATCTGTATTTTCCTTTTCTGTTTCTCAATTATCTGTCTTCTTTTGTTC

Coding sequence (CDS)

GAGCAATACTTTGAGGAGGCCAGTTTGCAGATTAATACCTTTGGAGAGAACAAGTCTTCTCTGGAAAATTGGAAGTCTGTTTTGGATGCCATGGCAGAAACTCATTGTGACACCTCTGGGCTCTTCGACTGTAACATATGCTTAGAGACTGTGAAAGATCCTGTCGTTACACTTTGTGGCCATCTCTTTTGCTGGCCCTGCATTTATAAATGGCTTCATTTTCAGGACAGCTCTACAGAAAAACAAGGCCAGCAACCTCAGCAATGTCCTGTTTGTAAGGCAGAAGTTTCTGATGCTACTCTAGTCCCACTCTATGGCAAAGGTGAAACTCAAGATCCTTTCGAAAGCAAGAATTCGCAGCTTGGAGTCGTCGTCCCTCGCAGGCCTCAGGGTCCTGGTTGCTCTGAGACATCAAGGCCTACCTCTCACTCAGCTCCTCAATTTCGGCGGGGAAATTCTTCTGATCAATCATCAAACAATTACTATGCTCAGATGACAGGAGTGTTTGGAGAGATGATCTACGCAAGAATGTTTGGTGCAATAACGAATCACTATGCATATCCCAACTCATACCCTCTTGTGTGGAGCAGTAGTCCTAGGATCAGAAGGCATATTTTGGCGACCGATGAATCACTCAACAGAATCTGTATTTTCCTTTTCTGTTTCTCAATTATCTGTCTTCTTTTGTTC

Protein sequence

EQYFEEASLQINTFGENKSSLENWKSVLDAMAETHCDTSGLFDCNICLETVKDPVVTLCGHLFCWPCIYKWLHFQDSSTEKQGQQPQQCPVCKAEVSDATLVPLYGKGETQDPFESKNSQLGVVVPRRPQGPGCSETSRPTSHSAPQFRRGNSSDQSSNNYYAQMTGVFGEMIYARMFGAITNHYAYPNSYPLVWSSSPRIRRHILATDESLNRICIFLFCFSIICLLLF

Homology

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BLAST of MC04g0143 vs. ExPASy Swiss-Prot
Match: Q6R567 (E3 ubiquitin-protein ligase RMA1H1 OS=Capsicum annuum OX=4072 GN=RMA1H1 PE=1 SV=1)

HSP 1 Score: 203.4 bits (516), Expect = 2.8e-51
Identity = 112/243 (46.09%), Postives = 143/243 (58.85%), Query Frame = 0


Query: 13  TFGENKSSLENWKSVLDAMAETHCDTSGLFDCNICLETVKDPVVTLCGHLFCWPCIYKWL 72
           TF ++ + L  WKS+ D + E   + SG FDCNICL+ V +PV+TLCGHL+CWPCIYKW+
Sbjct: 13  TFNKHDTPLGKWKSMNDEVEE---NISGGFDCNICLDCVHEPVITLCGHLYCWPCIYKWI 72

Query: 73  HFQDSSTEKQGQQPQQCPVCKAEVSDATLVPLYGK-GETQDPFESKNSQLGVVVPRRPQG 132
           +FQ  S+E   QQ  QCPVCKAEVS+ TL+PLYG+ G++  P E K   LG+V+P+RP  
Sbjct: 73  YFQSVSSENSDQQQPQCPVCKAEVSEKTLIPLYGRGGQSTKPSEGKAPNLGIVIPQRPPS 132

Query: 133 PGC-SETSRPTSHSAPQ---FRRGNSSDQSSNNYYAQ-------------------MTGV 192
           P C      PT+ S P     RRG      +     Q                      +
Sbjct: 133 PRCGGHFLLPTTDSNPSQLLQRRGYQQQSQTRQPAYQGSYMSSPMLSPGGATANMLQHSM 192

Query: 193 FGEMIYARMFG-AITNHYAYPNSYPLVWSSSPRIRRHILATDESLNRICIFLFCFSIICL 231
            GE+ YAR+FG + T  Y YPNSY L  SSSPR+RR +   D SL RIC FLFC  + CL
Sbjct: 193 IGEVAYARIFGNSSTTMYTYPNSYNLAISSSPRMRRQLSQADRSLGRICFFLFCCFVTCL 252

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BLAST of MC04g0143 vs. ExPASy Swiss-Prot
Match: O64425 (E3 ubiquitin-protein ligase RMA1 OS=Arabidopsis thaliana OX=3702 GN=RMA1 PE=1 SV=1)

HSP 1 Score: 169.5 bits (428), Expect = 4.5e-41
Identity = 103/251 (41.04%), Postives = 143/251 (56.97%), Query Frame = 0


Query: 1   EQYFEEASLQINTFGENKSSLENWKSVLDAMAETHCDT-SGLFDCNICLETVKDPVVTLC 60
           +Q FE+A+L    +GE     ++ K     ++    DT    FDCNICL++V++PVVTLC
Sbjct: 4   DQSFEDAALLGELYGEGAFCFKSKKPEPITVSVPSDDTDDSNFDCNICLDSVQEPVVTLC 63

Query: 61  GHLFCWPCIYKWLHFQDSSTEKQGQQPQQCPVCKAEVSDATLVPLYGKGETQDPFESKNS 120
           GHLFCWPCI+KWL  Q  ST  + Q+ +QCPVCK++VS +TLVPLYG+G      E KNS
Sbjct: 64  GHLFCWPCIHKWLDVQSFSTSDEYQRHRQCPVCKSKVSHSTLVPLYGRGRCTTQEEGKNS 123

Query: 121 QLGVVVPRRPQGPGCSETSRPTSHSAPQFRRGN--------------SSDQSSN--NYYA 180
                VP+RP GP        + +++   R                 S   SSN  +Y A
Sbjct: 124 -----VPKRPVGPVYRLEMPNSPYASTDLRLSQRVHFNSPQEGYYPVSGVMSSNSLSYSA 183

Query: 181 QMTGVF---GEMIYARMFGA-ITNHYAYPNSYPLVWSSSPRIRRHILATDESLNRICIFL 231
            +  V    GEM+  R+FG  + + +AYP++Y L  +S PR+RR I+  D+SL RI  F 
Sbjct: 184 VLDPVMVMVGEMVATRLFGTRVMDRFAYPDTYNLAGTSGPRMRRRIMQADKSLGRIFFFF 243

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BLAST of MC04g0143 vs. ExPASy Swiss-Prot
Match: Q8GUK7 (E3 ubiquitin-protein ligase RMA3 OS=Arabidopsis thaliana OX=3702 GN=RMA3 PE=1 SV=1)

HSP 1 Score: 145.2 bits (365), Expect = 9.1e-34
Identity = 87/217 (40.09%), Postives = 118/217 (54.38%), Query Frame = 0


Query: 39  SGLFDCNICLETVKDPVVTLCGHLFCWPCIYKWLHFQDSSTEKQGQQPQQCPVCKAEVSD 98
           SG FDCNICL+T  DPVVTLCGHLFCWPCIYKWLH Q SS     Q    CPVCK+ ++ 
Sbjct: 39  SGCFDCNICLDTAHDPVVTLCGHLFCWPCIYKWLHVQLSSVSVD-QHQNNCPVCKSNITI 98

Query: 99  ATLVPLYGKG--ETQDPFESKNSQ-LGVVVPRRP-----QGPGCS----------ETSRP 158
            +LVPLYG+G       F SK    L   +PRRP     + P  S          +T  P
Sbjct: 99  TSLVPLYGRGMSSPSSTFGSKKQDALSTDIPRRPAPSALRNPITSASSLNPSLQHQTLSP 158

Query: 159 TSHSAPQFRRGNSSDQSSN-------NYYAQMTGVFGEMIYARMFGAITNHYAYPNSYPL 218
           + H+     RG ++ +S++       ++   + G+FG+++Y R+FG  TN  A P     
Sbjct: 159 SFHNHQYSPRGFTTTESTDLANAVMMSFLYPVIGMFGDLVYTRIFGTFTNTIAQPYQ--- 218

Query: 219 VWSSSPRIRRHILATDESLNRICIFLFCFSIICLLLF 231
                    + ++  ++SLNR+ IF  C  I+CLLLF
Sbjct: 219 --------SQRMMQREKSLNRVSIFFLCCIILCLLLF 243

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BLAST of MC04g0143 vs. ExPASy Swiss-Prot
Match: P93030 (E3 ubiquitin-protein ligase RMA2 OS=Arabidopsis thaliana OX=3702 GN=RMA2 PE=1 SV=1)

HSP 1 Score: 142.1 bits (357), Expect = 7.7e-33
Identity = 82/202 (40.59%), Postives = 113/202 (55.94%), Query Frame = 0


Query: 34  THCDTSGLFDCNICLETVKDPVVTLCGHLFCWPCIYKWLHFQDSSTEKQGQ-----QPQQ 93
           T  D+ G FDCNICL+ V+DPVVTLCGHLFCWPCI+KW +  ++S ++  Q     +P +
Sbjct: 11  TLVDSGGDFDCNICLDQVRDPVVTLCGHLFCWPCIHKWTYASNNSRQRVDQYDHKREPPK 70

Query: 94  CPVCKAEVSDATLVPLYGKGETQDPFESKNSQLGVVVPRRPQGPGCSETSRPTSHSAPQF 153
           CPVCK++VS+ATLVP+YG+G+       K  Q G  VP RP GP              Q 
Sbjct: 71  CPVCKSDVSEATLVPIYGRGQ-------KAPQSGSNVPSRPTGPVYD------LRGVGQR 130

Query: 154 RRGNSSDQSSNNYYAQMTGVFGEMIYARMFGAITNHYAYPNSYPLVWSSSPRIRRHILAT 213
                S +        + GV  EM+Y R+FG  +++ A           + R RR  +  
Sbjct: 131 LGEGESQRYMYRMPDPVMGVVCEMVYRRLFGESSSNMAPYR------DMNVRSRRRAMQA 190

Query: 214 DESLNRICIFLFCFSIICLLLF 231
           +ESL+R+ +FL CF  +CL LF
Sbjct: 191 EESLSRVYLFLLCFMFMCLFLF 193

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BLAST of MC04g0143 vs. ExPASy Swiss-Prot
Match: Q5ZIR9 (E3 ubiquitin-protein ligase RNF185 OS=Gallus gallus OX=9031 GN=RNF185 PE=2 SV=1)

HSP 1 Score: 95.5 bits (236), Expect = 8.3e-19
Identity = 45/92 (48.91%), Postives = 58/92 (63.04%), Query Frame = 0


Query: 42  FDCNICLETVKDPVVTLCGHLFCWPCIYKWLHFQDSSTEKQGQQPQQCPVCKAEVSDATL 101
           F+CNICL+T KD V++LCGHLFCWPC+++WL  + +         Q CPVCKA +S   +
Sbjct: 39  FECNICLDTAKDAVISLCGHLFCWPCLHQWLETRPNR--------QVCPVCKAGISRDKV 98

Query: 102 VPLYGKGET--QDPFESKNSQLGVVVPRRPQG 132
           +PLYG+G T  QDP E          P RPQG
Sbjct: 99  IPLYGRGSTGQQDPREK--------TPPRPQG 114

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BLAST of MC04g0143 vs. NCBI nr
Match: XP_022147841.1 (E3 ubiquitin-protein ligase RMA1H1-like [Momordica charantia] >XP_022147842.1 E3 ubiquitin-protein ligase RMA1H1-like [Momordica charantia])

HSP 1 Score: 479 bits (1232), Expect = 1.13e-170
Identity = 230/230 (100.00%), Postives = 230/230 (100.00%), Query Frame = 0


Query: 1   EQYFEEASLQINTFGENKSSLENWKSVLDAMAETHCDTSGLFDCNICLETVKDPVVTLCG 60
           EQYFEEASLQINTFGENKSSLENWKSVLDAMAETHCDTSGLFDCNICLETVKDPVVTLCG
Sbjct: 4   EQYFEEASLQINTFGENKSSLENWKSVLDAMAETHCDTSGLFDCNICLETVKDPVVTLCG 63

Query: 61  HLFCWPCIYKWLHFQDSSTEKQGQQPQQCPVCKAEVSDATLVPLYGKGETQDPFESKNSQ 120
           HLFCWPCIYKWLHFQDSSTEKQGQQPQQCPVCKAEVSDATLVPLYGKGETQDPFESKNSQ
Sbjct: 64  HLFCWPCIYKWLHFQDSSTEKQGQQPQQCPVCKAEVSDATLVPLYGKGETQDPFESKNSQ 123

Query: 121 LGVVVPRRPQGPGCSETSRPTSHSAPQFRRGNSSDQSSNNYYAQMTGVFGEMIYARMFGA 180
           LGVVVPRRPQGPGCSETSRPTSHSAPQFRRGNSSDQSSNNYYAQMTGVFGEMIYARMFGA
Sbjct: 124 LGVVVPRRPQGPGCSETSRPTSHSAPQFRRGNSSDQSSNNYYAQMTGVFGEMIYARMFGA 183

Query: 181 ITNHYAYPNSYPLVWSSSPRIRRHILATDESLNRICIFLFCFSIICLLLF 230
           ITNHYAYPNSYPLVWSSSPRIRRHILATDESLNRICIFLFCFSIICLLLF
Sbjct: 184 ITNHYAYPNSYPLVWSSSPRIRRHILATDESLNRICIFLFCFSIICLLLF 233

[Close]

BLAST of MC04g0143 vs. NCBI nr
Match: XP_011658745.1 (E3 ubiquitin-protein ligase RMA1H1 [Cucumis sativus] >XP_031745015.1 E3 ubiquitin-protein ligase RMA1H1 [Cucumis sativus] >KAE8645771.1 hypothetical protein Csa_020520 [Cucumis sativus])

HSP 1 Score: 402 bits (1033), Expect = 3.04e-140
Identity = 196/236 (83.05%), Postives = 209/236 (88.56%), Query Frame = 0


Query: 1   EQYFEEASLQINTFGENKSSLENWKSVLDAMAETHCDTSGLFDCNICLETVKDPVVTLCG 60
           EQYFEEAS+QIN+FGENKSSLENWKSVLDAMAETHCD SGLFDCNICLETVKDPVVTLCG
Sbjct: 4   EQYFEEASIQINSFGENKSSLENWKSVLDAMAETHCDASGLFDCNICLETVKDPVVTLCG 63

Query: 61  HLFCWPCIYKWLHFQDSSTEKQGQQPQQCPVCKAEVSDATLVPLYGKGETQDPFESKNSQ 120
           HLFCWPCIYKW+H+QDSS EK+ ++  QCPVCKAEVSDATLVPLYGKGETQDPFESKN Q
Sbjct: 64  HLFCWPCIYKWIHYQDSSLEKKARRLPQCPVCKAEVSDATLVPLYGKGETQDPFESKNPQ 123

Query: 121 LGVVVPRRPQGPGCSETSRPTSHSA-----PQFRRGNS-SDQSSNNYYAQMTGVFGEMIY 180
           LG+VVPRRPQGP C E+ RPTSH       PQFR GNS S   SN YYA+MTGVFGE++Y
Sbjct: 124 LGIVVPRRPQGPACFESPRPTSHPTSHTVGPQFREGNSDSADQSNVYYAEMTGVFGEVVY 183

Query: 181 ARMFGAITNHYAYPNSYPLVWSSSPRIRRHILATDESLNRICIFLFCFSIICLLLF 230
           ARM GAITN YAYPNSYPLVWSSSPRIRRHIL TDESLNRICIFLFC  IICL+LF
Sbjct: 184 ARMSGAITNLYAYPNSYPLVWSSSPRIRRHILQTDESLNRICIFLFCCLIICLILF 239

[Close]

BLAST of MC04g0143 vs. NCBI nr
Match: XP_022988938.1 (E3 ubiquitin-protein ligase RMA1H1-like [Cucurbita maxima] >XP_022988939.1 E3 ubiquitin-protein ligase RMA1H1-like [Cucurbita maxima] >XP_022988940.1 E3 ubiquitin-protein ligase RMA1H1-like [Cucurbita maxima])

HSP 1 Score: 399 bits (1025), Expect = 3.17e-139
Identity = 198/230 (86.09%), Postives = 208/230 (90.43%), Query Frame = 0


Query: 1   EQYFEEASLQINTFGENKSSLENWKSVLDAMAETHCDTSGLFDCNICLETVKDPVVTLCG 60
           EQYFEE    IN+FGENKSS+ENWKS LDAMAET CD+SGLFDCNICLETVKDPVVTLCG
Sbjct: 4   EQYFEE----INSFGENKSSVENWKSALDAMAETQCDSSGLFDCNICLETVKDPVVTLCG 63

Query: 61  HLFCWPCIYKWLHFQDSSTEKQGQQPQQCPVCKAEVSDATLVPLYGKGETQDPFESKNSQ 120
           HLFCWPCIYKWLHFQDSSTEKQGQ+ QQCPVCKAEVSDATLVPLYGKGETQDPFESKNSQ
Sbjct: 64  HLFCWPCIYKWLHFQDSSTEKQGQRLQQCPVCKAEVSDATLVPLYGKGETQDPFESKNSQ 123

Query: 121 LGVVVPRRPQGPGCSETSRPTSHSAPQFRRGNSSDQSSNNYYAQMTGVFGEMIYARMFGA 180
           LG+VVPRRPQGP C E+ R TSH   QF++GN SDQ SN YYA+  GVFGEM+YARMFGA
Sbjct: 124 LGIVVPRRPQGPACFESPRATSHPVLQFQQGNLSDQ-SNIYYAE--GVFGEMVYARMFGA 183

Query: 181 ITNHYAYPNSYPLVWSSSPRIRRHILATDESLNRICIFLFCFSIICLLLF 230
           ITN YAYPNSYPLVWSSSPRIRRHIL TDESLNRICIFLFC SIICLLLF
Sbjct: 184 ITNLYAYPNSYPLVWSSSPRIRRHILQTDESLNRICIFLFCCSIICLLLF 226

[Close]

BLAST of MC04g0143 vs. NCBI nr
Match: XP_038888270.1 (E3 ubiquitin-protein ligase RMA1H1 [Benincasa hispida])

HSP 1 Score: 399 bits (1025), Expect = 4.86e-139
Identity = 194/235 (82.55%), Postives = 209/235 (88.94%), Query Frame = 0


Query: 1   EQYFEEASLQINTFGENKSSLENWKSVLDAMAETHCDTSGLFDCNICLETVKDPVVTLCG 60
           EQYFEEAS+QIN+FGENKSSLENWKSVLDAMAETHCD SGLFDCNICLETVKDPVVTLCG
Sbjct: 4   EQYFEEASIQINSFGENKSSLENWKSVLDAMAETHCDASGLFDCNICLETVKDPVVTLCG 63

Query: 61  HLFCWPCIYKWLHFQDSSTEKQGQQPQQCPVCKAEVSDATLVPLYGKGETQDPFESKNSQ 120
           HLFCWPCIYKWLH+QDSS EKQ ++  QCPVCKAEVSDATLVPLYGKG+T+D FESKN+Q
Sbjct: 64  HLFCWPCIYKWLHYQDSSLEKQARRLPQCPVCKAEVSDATLVPLYGKGKTRDSFESKNTQ 123

Query: 121 LGVVVPRRPQGPGCSE----TSRPTSHSAPQFRRGNS-SDQSSNNYYAQMTGVFGEMIYA 180
           LG+VVPRRP GP C E    TS PTSH+ PQ+R+GNS S   SN YYA+MTG FGE++YA
Sbjct: 124 LGIVVPRRPHGPACFESPRPTSHPTSHTVPQYRQGNSDSSDQSNVYYAEMTGAFGEVVYA 183

Query: 181 RMFGAITNHYAYPNSYPLVWSSSPRIRRHILATDESLNRICIFLFCFSIICLLLF 230
           RM GAITN YAYPNSYPLVWSSSPRIRRHIL TDESLNRICIFLFC  IICLLLF
Sbjct: 184 RMSGAITNLYAYPNSYPLVWSSSPRIRRHILQTDESLNRICIFLFCCLIICLLLF 238

[Close]

BLAST of MC04g0143 vs. NCBI nr
Match: XP_008455327.1 (PREDICTED: E3 ubiquitin-protein ligase RMA1H1 [Cucumis melo] >XP_008455328.1 PREDICTED: E3 ubiquitin-protein ligase RMA1H1 [Cucumis melo] >XP_008455329.1 PREDICTED: E3 ubiquitin-protein ligase RMA1H1 [Cucumis melo] >KAA0031578.1 E3 ubiquitin-protein ligase RMA1H1 [Cucumis melo var. makuwa] >TYK07030.1 E3 ubiquitin-protein ligase RMA1H1 [Cucumis melo var. makuwa])

HSP 1 Score: 398 bits (1023), Expect = 1.02e-138
Identity = 195/236 (82.63%), Postives = 207/236 (87.71%), Query Frame = 0


Query: 1   EQYFEEASLQINTFGENKSSLENWKSVLDAMAETHCDTSGLFDCNICLETVKDPVVTLCG 60
           EQYFEEAS+QIN+FGENKSSLENWKSVLDAMAETHCD SGLFDCNICLETVKDPVVTLCG
Sbjct: 4   EQYFEEASIQINSFGENKSSLENWKSVLDAMAETHCDASGLFDCNICLETVKDPVVTLCG 63

Query: 61  HLFCWPCIYKWLHFQDSSTEKQGQQPQQCPVCKAEVSDATLVPLYGKGETQDPFESKNSQ 120
           HLFCWPCIYKW+HFQDSS EKQ ++  QCPVCKAEVSDATLVPLYGKGETQ+P ESKN Q
Sbjct: 64  HLFCWPCIYKWIHFQDSSLEKQARRLPQCPVCKAEVSDATLVPLYGKGETQNPLESKNPQ 123

Query: 121 LGVVVPRRPQGPGCSETSRPTSHSA-----PQFRRGNS-SDQSSNNYYAQMTGVFGEMIY 180
           LG+VVPRRPQGP C E+ RPTSH       PQFR G+S S   SN YYAQ+TG FGE++Y
Sbjct: 124 LGIVVPRRPQGPACFESPRPTSHPTSHTVGPQFREGSSDSSDQSNVYYAQVTGAFGEVVY 183

Query: 181 ARMFGAITNHYAYPNSYPLVWSSSPRIRRHILATDESLNRICIFLFCFSIICLLLF 230
           ARM GAITN YAYPNSYPLVWSSSPRIRRHIL TDESLNRICIFLFC  IICLLLF
Sbjct: 184 ARMSGAITNLYAYPNSYPLVWSSSPRIRRHILQTDESLNRICIFLFCCLIICLLLF 239

[Close]

BLAST of MC04g0143 vs. ExPASy TrEMBL
Match: A0A6J1D3G6 (E3 ubiquitin-protein ligase RMA1H1-like OS=Momordica charantia OX=3673 GN=LOC111016683 PE=4 SV=1)

HSP 1 Score: 479 bits (1232), Expect = 5.48e-171
Identity = 230/230 (100.00%), Postives = 230/230 (100.00%), Query Frame = 0


Query: 1   EQYFEEASLQINTFGENKSSLENWKSVLDAMAETHCDTSGLFDCNICLETVKDPVVTLCG 60
           EQYFEEASLQINTFGENKSSLENWKSVLDAMAETHCDTSGLFDCNICLETVKDPVVTLCG
Sbjct: 4   EQYFEEASLQINTFGENKSSLENWKSVLDAMAETHCDTSGLFDCNICLETVKDPVVTLCG 63

Query: 61  HLFCWPCIYKWLHFQDSSTEKQGQQPQQCPVCKAEVSDATLVPLYGKGETQDPFESKNSQ 120
           HLFCWPCIYKWLHFQDSSTEKQGQQPQQCPVCKAEVSDATLVPLYGKGETQDPFESKNSQ
Sbjct: 64  HLFCWPCIYKWLHFQDSSTEKQGQQPQQCPVCKAEVSDATLVPLYGKGETQDPFESKNSQ 123

Query: 121 LGVVVPRRPQGPGCSETSRPTSHSAPQFRRGNSSDQSSNNYYAQMTGVFGEMIYARMFGA 180
           LGVVVPRRPQGPGCSETSRPTSHSAPQFRRGNSSDQSSNNYYAQMTGVFGEMIYARMFGA
Sbjct: 124 LGVVVPRRPQGPGCSETSRPTSHSAPQFRRGNSSDQSSNNYYAQMTGVFGEMIYARMFGA 183

Query: 181 ITNHYAYPNSYPLVWSSSPRIRRHILATDESLNRICIFLFCFSIICLLLF 230
           ITNHYAYPNSYPLVWSSSPRIRRHILATDESLNRICIFLFCFSIICLLLF
Sbjct: 184 ITNHYAYPNSYPLVWSSSPRIRRHILATDESLNRICIFLFCFSIICLLLF 233

[Close]

BLAST of MC04g0143 vs. ExPASy TrEMBL
Match: A0A6J1JKZ9 (E3 ubiquitin-protein ligase RMA1H1-like OS=Cucurbita maxima OX=3661 GN=LOC111486145 PE=4 SV=1)

HSP 1 Score: 399 bits (1025), Expect = 1.53e-139
Identity = 198/230 (86.09%), Postives = 208/230 (90.43%), Query Frame = 0


Query: 1   EQYFEEASLQINTFGENKSSLENWKSVLDAMAETHCDTSGLFDCNICLETVKDPVVTLCG 60
           EQYFEE    IN+FGENKSS+ENWKS LDAMAET CD+SGLFDCNICLETVKDPVVTLCG
Sbjct: 4   EQYFEE----INSFGENKSSVENWKSALDAMAETQCDSSGLFDCNICLETVKDPVVTLCG 63

Query: 61  HLFCWPCIYKWLHFQDSSTEKQGQQPQQCPVCKAEVSDATLVPLYGKGETQDPFESKNSQ 120
           HLFCWPCIYKWLHFQDSSTEKQGQ+ QQCPVCKAEVSDATLVPLYGKGETQDPFESKNSQ
Sbjct: 64  HLFCWPCIYKWLHFQDSSTEKQGQRLQQCPVCKAEVSDATLVPLYGKGETQDPFESKNSQ 123

Query: 121 LGVVVPRRPQGPGCSETSRPTSHSAPQFRRGNSSDQSSNNYYAQMTGVFGEMIYARMFGA 180
           LG+VVPRRPQGP C E+ R TSH   QF++GN SDQ SN YYA+  GVFGEM+YARMFGA
Sbjct: 124 LGIVVPRRPQGPACFESPRATSHPVLQFQQGNLSDQ-SNIYYAE--GVFGEMVYARMFGA 183

Query: 181 ITNHYAYPNSYPLVWSSSPRIRRHILATDESLNRICIFLFCFSIICLLLF 230
           ITN YAYPNSYPLVWSSSPRIRRHIL TDESLNRICIFLFC SIICLLLF
Sbjct: 184 ITNLYAYPNSYPLVWSSSPRIRRHILQTDESLNRICIFLFCCSIICLLLF 226

[Close]

BLAST of MC04g0143 vs. ExPASy TrEMBL
Match: A0A1S3C1W7 (E3 ubiquitin-protein ligase RMA1H1 OS=Cucumis melo OX=3656 GN=LOC103495518 PE=4 SV=1)

HSP 1 Score: 398 bits (1023), Expect = 4.92e-139
Identity = 195/236 (82.63%), Postives = 207/236 (87.71%), Query Frame = 0


Query: 1   EQYFEEASLQINTFGENKSSLENWKSVLDAMAETHCDTSGLFDCNICLETVKDPVVTLCG 60
           EQYFEEAS+QIN+FGENKSSLENWKSVLDAMAETHCD SGLFDCNICLETVKDPVVTLCG
Sbjct: 4   EQYFEEASIQINSFGENKSSLENWKSVLDAMAETHCDASGLFDCNICLETVKDPVVTLCG 63

Query: 61  HLFCWPCIYKWLHFQDSSTEKQGQQPQQCPVCKAEVSDATLVPLYGKGETQDPFESKNSQ 120
           HLFCWPCIYKW+HFQDSS EKQ ++  QCPVCKAEVSDATLVPLYGKGETQ+P ESKN Q
Sbjct: 64  HLFCWPCIYKWIHFQDSSLEKQARRLPQCPVCKAEVSDATLVPLYGKGETQNPLESKNPQ 123

Query: 121 LGVVVPRRPQGPGCSETSRPTSHSA-----PQFRRGNS-SDQSSNNYYAQMTGVFGEMIY 180
           LG+VVPRRPQGP C E+ RPTSH       PQFR G+S S   SN YYAQ+TG FGE++Y
Sbjct: 124 LGIVVPRRPQGPACFESPRPTSHPTSHTVGPQFREGSSDSSDQSNVYYAQVTGAFGEVVY 183

Query: 181 ARMFGAITNHYAYPNSYPLVWSSSPRIRRHILATDESLNRICIFLFCFSIICLLLF 230
           ARM GAITN YAYPNSYPLVWSSSPRIRRHIL TDESLNRICIFLFC  IICLLLF
Sbjct: 184 ARMSGAITNLYAYPNSYPLVWSSSPRIRRHILQTDESLNRICIFLFCCLIICLLLF 239

[Close]

BLAST of MC04g0143 vs. ExPASy TrEMBL
Match: A0A5A7SLT9 (E3 ubiquitin-protein ligase RMA1H1 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold13G003470 PE=4 SV=1)

HSP 1 Score: 398 bits (1023), Expect = 4.92e-139
Identity = 195/236 (82.63%), Postives = 207/236 (87.71%), Query Frame = 0


Query: 1   EQYFEEASLQINTFGENKSSLENWKSVLDAMAETHCDTSGLFDCNICLETVKDPVVTLCG 60
           EQYFEEAS+QIN+FGENKSSLENWKSVLDAMAETHCD SGLFDCNICLETVKDPVVTLCG
Sbjct: 4   EQYFEEASIQINSFGENKSSLENWKSVLDAMAETHCDASGLFDCNICLETVKDPVVTLCG 63

Query: 61  HLFCWPCIYKWLHFQDSSTEKQGQQPQQCPVCKAEVSDATLVPLYGKGETQDPFESKNSQ 120
           HLFCWPCIYKW+HFQDSS EKQ ++  QCPVCKAEVSDATLVPLYGKGETQ+P ESKN Q
Sbjct: 64  HLFCWPCIYKWIHFQDSSLEKQARRLPQCPVCKAEVSDATLVPLYGKGETQNPLESKNPQ 123

Query: 121 LGVVVPRRPQGPGCSETSRPTSHSA-----PQFRRGNS-SDQSSNNYYAQMTGVFGEMIY 180
           LG+VVPRRPQGP C E+ RPTSH       PQFR G+S S   SN YYAQ+TG FGE++Y
Sbjct: 124 LGIVVPRRPQGPACFESPRPTSHPTSHTVGPQFREGSSDSSDQSNVYYAQVTGAFGEVVY 183

Query: 181 ARMFGAITNHYAYPNSYPLVWSSSPRIRRHILATDESLNRICIFLFCFSIICLLLF 230
           ARM GAITN YAYPNSYPLVWSSSPRIRRHIL TDESLNRICIFLFC  IICLLLF
Sbjct: 184 ARMSGAITNLYAYPNSYPLVWSSSPRIRRHILQTDESLNRICIFLFCCLIICLLLF 239

[Close]

BLAST of MC04g0143 vs. ExPASy TrEMBL
Match: A0A6J1ERI0 (E3 ubiquitin-protein ligase RMA1H1-like isoform X1 OS=Cucurbita moschata OX=3662 GN=LOC111437136 PE=4 SV=1)

HSP 1 Score: 392 bits (1008), Expect = 7.95e-137
Identity = 197/238 (82.77%), Postives = 209/238 (87.82%), Query Frame = 0


Query: 1   EQYFEEASLQINTFGENKSSLENWKSVLDAMAETHCDTSGLFDCNICLETVKDPVVTLCG 60
           EQY+EE    IN+FGENKSS+ENWKS LDAMAET CD+SGLFDCNICLETVKDPVVTLCG
Sbjct: 4   EQYYEE----INSFGENKSSVENWKSALDAMAETQCDSSGLFDCNICLETVKDPVVTLCG 63

Query: 61  HLFCWPCIYKWLHFQDSSTEKQGQQPQQCPVCKAEVSDATLVPLYGKGETQDPFESKNSQ 120
           HLFCWPCIYKWLHFQDSSTEKQGQ+ QQCPVCKAEVSDATLVPLYGKGETQDPFESKNSQ
Sbjct: 64  HLFCWPCIYKWLHFQDSSTEKQGQRLQQCPVCKAEVSDATLVPLYGKGETQDPFESKNSQ 123

Query: 121 LGVVVPRRPQGPGCSETSRPTSHSAP--------QFRRGNSSDQSSNNYYAQMTGVFGEM 180
           LG+VVPRRPQGP C E+ R TSH  P        QF++GN SDQ SN YYA+  GVFGEM
Sbjct: 124 LGIVVPRRPQGPACFESPRATSHPHPHPHPHPVLQFQQGNLSDQ-SNIYYAE--GVFGEM 183

Query: 181 IYARMFGAITNHYAYPNSYPLVWSSSPRIRRHILATDESLNRICIFLFCFSIICLLLF 230
           +YARMFGAITN Y+YPNSYPLVWSSSPRIRRHIL TDESLNRICIFLFC SIICLLLF
Sbjct: 184 VYARMFGAITNLYSYPNSYPLVWSSSPRIRRHILQTDESLNRICIFLFCCSIICLLLF 234

[Close]

BLAST of MC04g0143 vs. TAIR 10
Match: AT4G03510.1 (RING membrane-anchor 1 )

HSP 1 Score: 169.5 bits (428), Expect = 3.2e-42
Identity = 103/251 (41.04%), Postives = 143/251 (56.97%), Query Frame = 0


Query: 1   EQYFEEASLQINTFGENKSSLENWKSVLDAMAETHCDT-SGLFDCNICLETVKDPVVTLC 60
           +Q FE+A+L    +GE     ++ K     ++    DT    FDCNICL++V++PVVTLC
Sbjct: 4   DQSFEDAALLGELYGEGAFCFKSKKPEPITVSVPSDDTDDSNFDCNICLDSVQEPVVTLC 63

Query: 61  GHLFCWPCIYKWLHFQDSSTEKQGQQPQQCPVCKAEVSDATLVPLYGKGETQDPFESKNS 120
           GHLFCWPCI+KWL  Q  ST  + Q+ +QCPVCK++VS +TLVPLYG+G      E KNS
Sbjct: 64  GHLFCWPCIHKWLDVQSFSTSDEYQRHRQCPVCKSKVSHSTLVPLYGRGRCTTQEEGKNS 123

Query: 121 QLGVVVPRRPQGPGCSETSRPTSHSAPQFRRGN--------------SSDQSSN--NYYA 180
                VP+RP GP        + +++   R                 S   SSN  +Y A
Sbjct: 124 -----VPKRPVGPVYRLEMPNSPYASTDLRLSQRVHFNSPQEGYYPVSGVMSSNSLSYSA 183

Query: 181 QMTGVF---GEMIYARMFGA-ITNHYAYPNSYPLVWSSSPRIRRHILATDESLNRICIFL 231
            +  V    GEM+  R+FG  + + +AYP++Y L  +S PR+RR I+  D+SL RI  F 
Sbjct: 184 VLDPVMVMVGEMVATRLFGTRVMDRFAYPDTYNLAGTSGPRMRRRIMQADKSLGRIFFFF 243

[Close]

BLAST of MC04g0143 vs. TAIR 10
Match: AT4G03510.2 (RING membrane-anchor 1 )

HSP 1 Score: 169.5 bits (428), Expect = 3.2e-42
Identity = 103/251 (41.04%), Postives = 143/251 (56.97%), Query Frame = 0


Query: 1   EQYFEEASLQINTFGENKSSLENWKSVLDAMAETHCDT-SGLFDCNICLETVKDPVVTLC 60
           +Q FE+A+L    +GE     ++ K     ++    DT    FDCNICL++V++PVVTLC
Sbjct: 4   DQSFEDAALLGELYGEGAFCFKSKKPEPITVSVPSDDTDDSNFDCNICLDSVQEPVVTLC 63

Query: 61  GHLFCWPCIYKWLHFQDSSTEKQGQQPQQCPVCKAEVSDATLVPLYGKGETQDPFESKNS 120
           GHLFCWPCI+KWL  Q  ST  + Q+ +QCPVCK++VS +TLVPLYG+G      E KNS
Sbjct: 64  GHLFCWPCIHKWLDVQSFSTSDEYQRHRQCPVCKSKVSHSTLVPLYGRGRCTTQEEGKNS 123

Query: 121 QLGVVVPRRPQGPGCSETSRPTSHSAPQFRRGN--------------SSDQSSN--NYYA 180
                VP+RP GP        + +++   R                 S   SSN  +Y A
Sbjct: 124 -----VPKRPVGPVYRLEMPNSPYASTDLRLSQRVHFNSPQEGYYPVSGVMSSNSLSYSA 183

Query: 181 QMTGVF---GEMIYARMFGA-ITNHYAYPNSYPLVWSSSPRIRRHILATDESLNRICIFL 231
            +  V    GEM+  R+FG  + + +AYP++Y L  +S PR+RR I+  D+SL RI  F 
Sbjct: 184 VLDPVMVMVGEMVATRLFGTRVMDRFAYPDTYNLAGTSGPRMRRRIMQADKSLGRIFFFF 243

[Close]

BLAST of MC04g0143 vs. TAIR 10
Match: AT4G27470.1 (RING membrane-anchor 3 )

HSP 1 Score: 145.2 bits (365), Expect = 6.5e-35
Identity = 87/217 (40.09%), Postives = 118/217 (54.38%), Query Frame = 0


Query: 39  SGLFDCNICLETVKDPVVTLCGHLFCWPCIYKWLHFQDSSTEKQGQQPQQCPVCKAEVSD 98
           SG FDCNICL+T  DPVVTLCGHLFCWPCIYKWLH Q SS     Q    CPVCK+ ++ 
Sbjct: 39  SGCFDCNICLDTAHDPVVTLCGHLFCWPCIYKWLHVQLSSVSVD-QHQNNCPVCKSNITI 98

Query: 99  ATLVPLYGKG--ETQDPFESKNSQ-LGVVVPRRP-----QGPGCS----------ETSRP 158
            +LVPLYG+G       F SK    L   +PRRP     + P  S          +T  P
Sbjct: 99  TSLVPLYGRGMSSPSSTFGSKKQDALSTDIPRRPAPSALRNPITSASSLNPSLQHQTLSP 158

Query: 159 TSHSAPQFRRGNSSDQSSN-------NYYAQMTGVFGEMIYARMFGAITNHYAYPNSYPL 218
           + H+     RG ++ +S++       ++   + G+FG+++Y R+FG  TN  A P     
Sbjct: 159 SFHNHQYSPRGFTTTESTDLANAVMMSFLYPVIGMFGDLVYTRIFGTFTNTIAQPYQ--- 218

Query: 219 VWSSSPRIRRHILATDESLNRICIFLFCFSIICLLLF 231
                    + ++  ++SLNR+ IF  C  I+CLLLF
Sbjct: 219 --------SQRMMQREKSLNRVSIFFLCCIILCLLLF 243

[Close]

BLAST of MC04g0143 vs. TAIR 10
Match: AT4G28270.1 (RING membrane-anchor 2 )

HSP 1 Score: 142.1 bits (357), Expect = 5.5e-34
Identity = 82/202 (40.59%), Postives = 113/202 (55.94%), Query Frame = 0


Query: 34  THCDTSGLFDCNICLETVKDPVVTLCGHLFCWPCIYKWLHFQDSSTEKQGQ-----QPQQ 93
           T  D+ G FDCNICL+ V+DPVVTLCGHLFCWPCI+KW +  ++S ++  Q     +P +
Sbjct: 11  TLVDSGGDFDCNICLDQVRDPVVTLCGHLFCWPCIHKWTYASNNSRQRVDQYDHKREPPK 70

Query: 94  CPVCKAEVSDATLVPLYGKGETQDPFESKNSQLGVVVPRRPQGPGCSETSRPTSHSAPQF 153
           CPVCK++VS+ATLVP+YG+G+       K  Q G  VP RP GP              Q 
Sbjct: 71  CPVCKSDVSEATLVPIYGRGQ-------KAPQSGSNVPSRPTGPVYD------LRGVGQR 130

Query: 154 RRGNSSDQSSNNYYAQMTGVFGEMIYARMFGAITNHYAYPNSYPLVWSSSPRIRRHILAT 213
                S +        + GV  EM+Y R+FG  +++ A           + R RR  +  
Sbjct: 131 LGEGESQRYMYRMPDPVMGVVCEMVYRRLFGESSSNMAPYR------DMNVRSRRRAMQA 190

Query: 214 DESLNRICIFLFCFSIICLLLF 231
           +ESL+R+ +FL CF  +CL LF
Sbjct: 191 EESLSRVYLFLLCFMFMCLFLF 193

[Close]

BLAST of MC04g0143 vs. TAIR 10
Match: AT1G74990.1 (RING/U-box superfamily protein )

HSP 1 Score: 115.2 bits (287), Expect = 7.2e-26
Identity = 62/122 (50.82%), Postives = 73/122 (59.84%), Query Frame = 0


Query: 37  DTSGLFDCNICLETVKDPVVTLCGHLFCWPCIYKWLHFQDSSTEKQGQQPQQCPVCKAEV 96
           D S  F CNICLE  ++P+VTLCGHLFCWPC+YKWLH+   S          CPVCKA V
Sbjct: 12  DASNNFGCNICLELAREPIVTLCGHLFCWPCLYKWLHYHSKS--------NHCPVCKALV 71

Query: 97  SDATLVPLYGKGE-TQDPFESKNSQLGVVVPRRPQGPGCSETSRP---TSHSAPQFRRGN 155
            + TLVPLYG G+ + DP    NS  GV VP RP     +ET+RP     H    F  G+
Sbjct: 72  KEDTLVPLYGMGKPSSDPRSKLNS--GVTVPNRPAATR-TETARPRLEQRHHGSSFFGGH 122

The following BLAST results are available for this feature:

BLAST of MC04g0143 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q6R567	2.8e-51	46.09	E3 ubiquitin-protein ligase RMA1H1 OS=Capsicum annuum OX=4072 GN=RMA1H1 PE=1 SV=...	[more]
O64425	4.5e-41	41.04	E3 ubiquitin-protein ligase RMA1 OS=Arabidopsis thaliana OX=3702 GN=RMA1 PE=1 SV...	[more]
Q8GUK7	9.1e-34	40.09	E3 ubiquitin-protein ligase RMA3 OS=Arabidopsis thaliana OX=3702 GN=RMA3 PE=1 SV...	[more]
P93030	7.7e-33	40.59	E3 ubiquitin-protein ligase RMA2 OS=Arabidopsis thaliana OX=3702 GN=RMA2 PE=1 SV...	[more]
Q5ZIR9	8.3e-19	48.91	E3 ubiquitin-protein ligase RNF185 OS=Gallus gallus OX=9031 GN=RNF185 PE=2 SV=1	[more]

BLAST of MC04g0143 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022147841.1	1.13e-170	100.00	E3 ubiquitin-protein ligase RMA1H1-like [Momordica charantia] >XP_022147842.1 E3...	[more]
XP_011658745.1	3.04e-140	83.05	E3 ubiquitin-protein ligase RMA1H1 [Cucumis sativus] >XP_031745015.1 E3 ubiquiti...	[more]
XP_022988938.1	3.17e-139	86.09	E3 ubiquitin-protein ligase RMA1H1-like [Cucurbita maxima] >XP_022988939.1 E3 ub...	[more]
XP_038888270.1	4.86e-139	82.55	E3 ubiquitin-protein ligase RMA1H1 [Benincasa hispida]	[more]
XP_008455327.1	1.02e-138	82.63	PREDICTED: E3 ubiquitin-protein ligase RMA1H1 [Cucumis melo] >XP_008455328.1 PRE...	[more]

BLAST of MC04g0143 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1D3G6	5.48e-171	100.00	E3 ubiquitin-protein ligase RMA1H1-like OS=Momordica charantia OX=3673 GN=LOC111...	[more]
A0A6J1JKZ9	1.53e-139	86.09	E3 ubiquitin-protein ligase RMA1H1-like OS=Cucurbita maxima OX=3661 GN=LOC111486...	[more]
A0A1S3C1W7	4.92e-139	82.63	E3 ubiquitin-protein ligase RMA1H1 OS=Cucumis melo OX=3656 GN=LOC103495518 PE=4 ...	[more]
A0A5A7SLT9	4.92e-139	82.63	E3 ubiquitin-protein ligase RMA1H1 OS=Cucumis melo var. makuwa OX=1194695 GN=E56...	[more]
A0A6J1ERI0	7.95e-137	82.77	E3 ubiquitin-protein ligase RMA1H1-like isoform X1 OS=Cucurbita moschata OX=3662...	[more]

BLAST of MC04g0143 vs. TAIR 10


Match Name	E-value	Identity	Description
AT4G03510.1	3.2e-42	41.04	RING membrane-anchor 1	[more]
AT4G03510.2	3.2e-42	41.04	RING membrane-anchor 1	[more]
AT4G27470.1	6.5e-35	40.09	RING membrane-anchor 3	[more]
AT4G28270.1	5.5e-34	40.59	RING membrane-anchor 2	[more]
AT1G74990.1	7.2e-26	50.82	RING/U-box superfamily protein	[more]

InterPro

Analysis Name: InterPro Annotations of Bitter gourd (Dali-11) v1
Date Performed: 2021-10-25

Position :

Zoom :

x 1


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR001841	Zinc finger, RING-type	SMART	SM00184	ring_2	coord: 44..92 e-value: 1.2E-10 score: 51.3
IPR001841	Zinc finger, RING-type	PROSITE	PS50089	ZF_RING_2	coord: 44..93 score: 13.212175
IPR013083	Zinc finger, RING/FYVE/PHD-type	GENE3D	3.30.40.10	Zinc/RING finger domain, C3HC4 (zinc finger)	coord: 4..109 e-value: 3.7E-18 score: 67.1
IPR018957	Zinc finger, C3HC4 RING-type	PFAM	PF00097	zf-C3HC4	coord: 44..92 e-value: 8.8E-10 score: 38.3
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 128..157
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 134..157
None	No IPR available	PANTHER	PTHR12313:SF59	E3 UBIQUITIN-PROTEIN LIGASE RMA1	coord: 1..230
None	No IPR available	CDD	cd16745	RING-HC_AtRMA_like	coord: 42..94 e-value: 3.66208E-25 score: 91.5967
None	No IPR available	SUPERFAMILY	57850	RING/U-box	coord: 37..98
IPR045103	E3 ubiquitin-protein ligase RNF5/RNF185-like	PANTHER	PTHR12313	E3 UBIQUITIN-PROTEIN LIGASE RNF5-RELATED	coord: 1..230
IPR017907	Zinc finger, RING-type, conserved site	PROSITE	PS00518	ZF_RING_1	coord: 59..68

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
MC04g0143.1	MC04g0143.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0016567	protein ubiquitination
biological_process	GO:0006511	ubiquitin-dependent protein catabolic process
cellular_component	GO:0005783	endoplasmic reticulum
cellular_component	GO:0016021	integral component of membrane
molecular_function	GO:0046872	metal ion binding
molecular_function	GO:0061630	ubiquitin protein ligase activity