MC04g0038 (gene) Bitter gourd (Dali-11) v1

Overview


Name	MC04g0038
Type	gene
Organism	Momordica charantia cv. Dali-11 (Bitter gourd (Dali-11) v1)
Description	CCT domain-containing protein
Location	MC04: 313887 .. 315106 (+)
RNA-Seq Expression	MC04g0038
Synteny	MC04g0038

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

GCCATTTCAGCGGCCGGGTCTCAAAACCTGTGCCTCGGATACCCACAGCCACCCGATAATCAGTTTCATGAATTTGGAGAGCAGGATGCCTTCGGTTTCGGCTTCGGTTTGCTTCCACATATCAAACCAATTTATCACCCACTTCCCACCGATAATTGGGTATCCTCATCTCATTTTCTAAATTTCAAAATTGTAGGGATATATATTATTATTGTTTGCATTATTCCTGTAACAACACAAATTAAATTAATTTAACCCATGCTCTGAATCATATTGTTATAGGAAATTCAAAGCAGCAATAATCAAGTTCCTGCTACTGACCAAGACGACTCAAATAATATGAAGGTGGGCCGCTACTCTGAAGAAGTAAGAAAAGAAAGGATTCTCCGGTATTTGAAGAAAAGAAACCAAAGAAATTTCAACAAAACCATAAAGGTTTTCCTTTTTTTTCCCCTCTCCATTGATAAATAATAAATTCTGGCTTGGTAATATATATATAGAATAATTAATAATATATAGAAGTGATTATGAAACACAATGGTACAGTATGCATGTCGGAAAACCTTAGCCGACAGAAGGATTCGAGTCCGAGGGAGATTTGCAAGGAACAACGAAGCATGTGATCAACAACTTAATCCAACAAAGAATAATAATAATGACGACACTACTGAGTCTACCCAATTATTATACAACCATCACGATCTCGCTCTTCAGGTACGAGGTATCCCTATCACTATATATATATATATATATATATATATATATATATGAACAACCTGCCTAAATTACTAATTAAATCGTCTCTAATCTTTTTTAACTATATATTTCTCATTTTACTATTTAATCTTCTCAAGCTTTCATTTTAACCCCTATTATTTCAAAAACTCAACTCCCCCACGTTGGTTTCGTGTTTTTTTTTTGTTCACATTTAATTTTGCTGATTCAACGTATCCAAATATGTCGATAAAACAATACATTAAAATATTAAATTTCTATTCTTTTGTGAAATGATTTGATTGAGAATTTCAAAAGATAAAAAGATCAAATTGAGATAACCCTAAAAGATTTAGCTAGCTTATTAGAAGAAGATTCCTCAACTATTAGAAACCCAGTGTTCAATGGATTATATATGGTAATATTTTCGGTTGATTGTGATTTTTTTGCAGATGAAAAAAGATGAGGAAGAATGGCTACAAGAGATTACAAGTCTAATGTACTTA

mRNA sequence

GCCATTTCAGCGGCCGGGTCTCAAAACCTGTGCCTCGGATACCCACAGCCACCCGATAATCAGTTTCATGAATTTGGAGAGCAGGATGCCTTCGGTTTCGGCTTCGGTTTGCTTCCACATATCAAACCAATTTATCACCCACTTCCCACCGATAATTGGGAAATTCAAAGCAGCAATAATCAAGTTCCTGCTACTGACCAAGACGACTCAAATAATATGAAGGTGGGCCGCTACTCTGAAGAAGTAAGAAAAGAAAGGATTCTCCGGTATTTGAAGAAAAGAAACCAAAGAAATTTCAACAAAACCATAAAGTATGCATGTCGGAAAACCTTAGCCGACAGAAGGATTCGAGTCCGAGGGAGATTTGCAAGGAACAACGAAGCATGTGATCAACAACTTAATCCAACAAAGAATAATAATAATGACGACACTACTGAGTCTACCCAATTATTATACAACCATCACGATCTCGCTCTTCAGATGAAAAAAGATGAGGAAGAATGGCTACAAGAGATTACAAGTCTAATGTACTTA

Coding sequence (CDS)

GCCATTTCAGCGGCCGGGTCTCAAAACCTGTGCCTCGGATACCCACAGCCACCCGATAATCAGTTTCATGAATTTGGAGAGCAGGATGCCTTCGGTTTCGGCTTCGGTTTGCTTCCACATATCAAACCAATTTATCACCCACTTCCCACCGATAATTGGGAAATTCAAAGCAGCAATAATCAAGTTCCTGCTACTGACCAAGACGACTCAAATAATATGAAGGTGGGCCGCTACTCTGAAGAAGTAAGAAAAGAAAGGATTCTCCGGTATTTGAAGAAAAGAAACCAAAGAAATTTCAACAAAACCATAAAGTATGCATGTCGGAAAACCTTAGCCGACAGAAGGATTCGAGTCCGAGGGAGATTTGCAAGGAACAACGAAGCATGTGATCAACAACTTAATCCAACAAAGAATAATAATAATGACGACACTACTGAGTCTACCCAATTATTATACAACCATCACGATCTCGCTCTTCAGATGAAAAAAGATGAGGAAGAATGGCTACAAGAGATTACAAGTCTAATGTACTTA

Protein sequence

AISAAGSQNLCLGYPQPPDNQFHEFGEQDAFGFGFGLLPHIKPIYHPLPTDNWEIQSSNNQVPATDQDDSNNMKVGRYSEEVRKERILRYLKKRNQRNFNKTIKYACRKTLADRRIRVRGRFARNNEACDQQLNPTKNNNNDDTTESTQLLYNHHDLALQMKKDEEEWLQEITSLMYL

Homology

[Close]

BLAST of MC04g0038 vs. ExPASy Swiss-Prot
Match: Q940T9 (Zinc finger protein CONSTANS-LIKE 4 OS=Arabidopsis thaliana OX=3702 GN=COL4 PE=2 SV=2)

HSP 1 Score: 48.9 bits (115), Expect = 6.9e-05
Identity = 26/65 (40.00%), Postives = 38/65 (58.46%), Query Frame = 0


Query: 63  PATDQDDSNNMKVGRYSEEVRKERILRYLKKRNQRNFNKTIKYACRKTLADRRIRVRGRF 122
           PAT   D    +    +   R+ R++RY +KR  R F KTI+YA RK  A+ R R++GRF
Sbjct: 275 PATSGADPGTQRAVPLTSAEREARVMRYREKRKNRKFEKTIRYASRKAYAEMRPRIKGRF 334

Query: 123 ARNNE 128
           A+  +
Sbjct: 335 AKRTD 339

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BLAST of MC04g0038 vs. ExPASy Swiss-Prot
Match: Q9SK53 (Zinc finger protein CONSTANS-LIKE 3 OS=Arabidopsis thaliana OX=3702 GN=COL3 PE=1 SV=1)

HSP 1 Score: 47.8 bits (112), Expect = 1.5e-04
Identity = 23/46 (50.00%), Postives = 33/46 (71.74%), Query Frame = 0


Query: 83  RKERILRYLKKRNQRNFNKTIKYACRKTLADRRIRVRGRFARNNEA 129
           R+ R+LRY +KR  R F KTI+YA RK  A+ R R++GRFA+  ++
Sbjct: 229 REARVLRYREKRKNRKFEKTIRYASRKAYAEMRPRIKGRFAKRTDS 274

[Close]

BLAST of MC04g0038 vs. ExPASy Swiss-Prot
Match: Q9FHH8 (Zinc finger protein CONSTANS-LIKE 5 OS=Arabidopsis thaliana OX=3702 GN=COL5 PE=2 SV=2)

HSP 1 Score: 47.4 bits (111), Expect = 2.0e-04
Identity = 29/71 (40.85%), Postives = 41/71 (57.75%), Query Frame = 0


Query: 57  SSNNQVPATDQDDSNNMKVGRYSEEVRKERILRYLKKRNQRNFNKTIKYACRKTLADRRI 116
           ++NN V  +    S      + S   R+ R+LRY +KR  R F KTI+YA RK  A+ R 
Sbjct: 259 NTNNSVNRSTITSSTTGGDHQASSMDREARVLRYREKRKNRKFEKTIRYASRKAYAESRP 318

Query: 117 RVRGRFARNNE 128
           R++GRFA+  E
Sbjct: 319 RIKGRFAKRTE 329

[Close]

BLAST of MC04g0038 vs. ExPASy Swiss-Prot
Match: O50055 (Zinc finger protein CONSTANS-LIKE 1 OS=Arabidopsis thaliana OX=3702 GN=COL1 PE=1 SV=1)

HSP 1 Score: 46.6 bits (109), Expect = 3.4e-04
Identity = 29/77 (37.66%), Postives = 43/77 (55.84%), Query Frame = 0


Query: 58  SNNQVPATDQDDSNNMKVGRYSEEVRKERILRYLKKRNQRNFNKTIKYACRKTLADRRIR 117
           SN + P    D          S   R+ R+LRY +K+  R F KTI+YA RK  A++R R
Sbjct: 261 SNPRSPKAVTDQPPYPPAQMLSPRDREARVLRYREKKKMRKFEKTIRYASRKAYAEKRPR 320

Query: 118 VRGRFARNNEACDQQLN 135
           ++GRFA+  +  D++ N
Sbjct: 321 IKGRFAKKKDV-DEEAN 336

[Close]

BLAST of MC04g0038 vs. ExPASy Swiss-Prot
Match: Q39057 (Zinc finger protein CONSTANS OS=Arabidopsis thaliana OX=3702 GN=CO PE=1 SV=1)

HSP 1 Score: 46.6 bits (109), Expect = 3.4e-04
Identity = 28/63 (44.44%), Postives = 38/63 (60.32%), Query Frame = 0


Query: 70  SNNMKVGRYSEEVRKERILRYLKKRNQRNFNKTIKYACRKTLADRRIRVRGRFARNNEAC 129
           S  + V + S   R+ R+LRY +KR  R F KTI+YA RK  A+ R RV GRFA+     
Sbjct: 293 SQMITVTQLSPMDREARVLRYREKRKTRKFEKTIRYASRKAYAEIRPRVNGRFAKREIEA 352

Query: 130 DQQ 133
           ++Q
Sbjct: 353 EEQ 355

[Close]

BLAST of MC04g0038 vs. NCBI nr
Match: XP_038888885.1 (two-component response regulator-like APRR1 [Benincasa hispida])

HSP 1 Score: 221 bits (564), Expect = 2.84e-69
Identity = 125/181 (69.06%), Postives = 140/181 (77.35%), Query Frame = 0


Query: 1   AISAAGSQNLC-LGYPQPPDNQFHEFGEQDAFGFGFGLLPHIKPIYHPLPTDNWEIQSSN 60
           A  A GSQN C LG    PD+QF+EF +       FGL+P IKP+YHPLP  NWE QS  
Sbjct: 106 AAPAEGSQNFCHLGCQ--PDHQFYEFSDDC-----FGLVPEIKPLYHPLPPHNWENQS-- 165

Query: 61  NQVPATDQDDSNNMKVGRYSEEVRKERILRYLKKRNQRNFNKTIKYACRKTLADRRIRVR 120
           NQVP  +    +NMKVGRYSEEVRKERILRYLKKRNQRNFNKTIKYACRKTLADRRIRVR
Sbjct: 166 NQVPVAE---DSNMKVGRYSEEVRKERILRYLKKRNQRNFNKTIKYACRKTLADRRIRVR 225

Query: 121 GRFARNNEACDQQLNPTKNNNNDDTT--ESTQLLYNHHDLALQMKKDEEEWLQEITSLMY 178
           GRFARNNEA DQ++NPT  N   DT+  + T+LLYN+HD  +QMK+DEEEWLQEITSLM 
Sbjct: 226 GRFARNNEASDQEINPTTKN---DTSIHKDTELLYNNHDFGVQMKRDEEEWLQEITSLMC 271

[Close]

BLAST of MC04g0038 vs. NCBI nr
Match: XP_023530352.1 (zinc finger protein CONSTANS-LIKE 5-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 218 bits (556), Expect = 3.61e-68
Identity = 117/176 (66.48%), Postives = 136/176 (77.27%), Query Frame = 0


Query: 3   SAAGSQNLCLGYPQPPDNQFHEFGEQDAFGFGFGLLPHIKPIYHPLPTDNWEIQSSNNQV 62
           +AA  Q+ C+GY QP D+   ++ ++      F L+P  +P+YHPLP DNWEIQS  NQV
Sbjct: 99  NAAPCQSFCVGY-QPDDHPLFQYPDEC-----FRLVPETEPLYHPLPPDNWEIQS--NQV 158

Query: 63  PATDQDDSNNMKVGRYSEEVRKERILRYLKKRNQRNFNKTIKYACRKTLADRRIRVRGRF 122
           P ++    +NMKVGRYSEEVRKERILRYLKKRNQRNFNKTIKYACRKTLADRRIRVRGRF
Sbjct: 159 PVSE---DSNMKVGRYSEEVRKERILRYLKKRNQRNFNKTIKYACRKTLADRRIRVRGRF 218

Query: 123 ARNNEACDQQLNPTKNNNNDDTTESTQLLYNHHDLALQMKKDEEEWLQEITSLMYL 178
           ARNNEACDQQLNPTK N+       TQLLYN   +  QMKKDEEEW++E+T LMYL
Sbjct: 219 ARNNEACDQQLNPTKINHTSIHKVDTQLLYNQDHVGAQMKKDEEEWVEEMTGLMYL 263

[Close]

BLAST of MC04g0038 vs. NCBI nr
Match: XP_022989100.1 (zinc finger protein CONSTANS-LIKE 5-like [Cucurbita maxima])

HSP 1 Score: 217 bits (553), Expect = 1.03e-67
Identity = 117/176 (66.48%), Postives = 134/176 (76.14%), Query Frame = 0


Query: 3   SAAGSQNLCLGYPQPPDNQFHEFGEQDAFGFGFGLLPHIKPIYHPLPTDNWEIQSSNNQV 62
           +AA  QN C+GY QP D+   ++ +       F L+P  +P+YHPLP DNWEIQS  NQV
Sbjct: 99  NAAPCQNFCVGY-QPDDHPLFQYPDDC-----FRLVPETEPLYHPLPPDNWEIQS--NQV 158

Query: 63  PATDQDDSNNMKVGRYSEEVRKERILRYLKKRNQRNFNKTIKYACRKTLADRRIRVRGRF 122
           P ++    +NMKVGRYSEEVRKERILRYLKKRNQRNFNKTIKYACRKTLADRRIRVRGRF
Sbjct: 159 PVSE---DSNMKVGRYSEEVRKERILRYLKKRNQRNFNKTIKYACRKTLADRRIRVRGRF 218

Query: 123 ARNNEACDQQLNPTKNNNNDDTTESTQLLYNHHDLALQMKKDEEEWLQEITSLMYL 178
           ARNNEACDQQLNPTK N+       TQLLYN   +  Q KKDEEEW++E+T LMYL
Sbjct: 219 ARNNEACDQQLNPTKINHTSIHKVDTQLLYNQDHVGAQRKKDEEEWVEEMTGLMYL 263

[Close]

BLAST of MC04g0038 vs. NCBI nr
Match: XP_022930639.1 (zinc finger protein CONSTANS-LIKE 5-like [Cucurbita moschata])

HSP 1 Score: 212 bits (539), Expect = 1.40e-65
Identity = 115/176 (65.34%), Postives = 133/176 (75.57%), Query Frame = 0


Query: 3   SAAGSQNLCLGYPQPPDNQFHEFGEQDAFGFGFGLLPHIKPIYHPLPTDNWEIQSSNNQV 62
           +AA  Q+ C+GY QP D+   ++ +       F L+P  +P+YHPLP DNWEIQSS  QV
Sbjct: 100 NAAPCQSFCVGY-QPDDHPLFQYPDDC-----FRLVPETEPLYHPLPPDNWEIQSS--QV 159

Query: 63  PATDQDDSNNMKVGRYSEEVRKERILRYLKKRNQRNFNKTIKYACRKTLADRRIRVRGRF 122
           P ++    +NMKVGRYSEEVRKERILRYLKKRNQRNFNKTIKYACRKTLADRRIRVRGRF
Sbjct: 160 PVSE---DSNMKVGRYSEEVRKERILRYLKKRNQRNFNKTIKYACRKTLADRRIRVRGRF 219

Query: 123 ARNNEACDQQLNPTKNNNNDDTTESTQLLYNHHDLALQMKKDEEEWLQEITSLMYL 178
           ARNNEACDQQLNPTK N+       TQLLYN   +  Q KKDEEEW++E+  LMYL
Sbjct: 220 ARNNEACDQQLNPTKINHTCIHKADTQLLYNRDHVGAQRKKDEEEWVEEMRGLMYL 264

[Close]

BLAST of MC04g0038 vs. NCBI nr
Match: KAG6589308.1 (Zinc finger protein CONSTANS-LIKE 5, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 211 bits (538), Expect = 1.98e-65
Identity = 114/176 (64.77%), Postives = 133/176 (75.57%), Query Frame = 0


Query: 3   SAAGSQNLCLGYPQPPDNQFHEFGEQDAFGFGFGLLPHIKPIYHPLPTDNWEIQSSNNQV 62
           +AA  Q+ C+GY QP D+   ++ +       F L+P  +P+YHPLP DNWEIQS  NQV
Sbjct: 100 NAAPCQSFCVGY-QPDDHPLFQYPDDC-----FRLVPETEPLYHPLPPDNWEIQS--NQV 159

Query: 63  PATDQDDSNNMKVGRYSEEVRKERILRYLKKRNQRNFNKTIKYACRKTLADRRIRVRGRF 122
           P ++    +NMKVGRYSEEVRKERILRYLKKRNQRNFNKTIKYACRKTLADRRIRVRGRF
Sbjct: 160 PVSE---DSNMKVGRYSEEVRKERILRYLKKRNQRNFNKTIKYACRKTLADRRIRVRGRF 219

Query: 123 ARNNEACDQQLNPTKNNNNDDTTESTQLLYNHHDLALQMKKDEEEWLQEITSLMYL 178
           ARNNEACD+QLNPTK N+       TQLLYN   +  Q KKDEEEW++E+  LMYL
Sbjct: 220 ARNNEACDRQLNPTKINHTSIHKVDTQLLYNRDHVGAQRKKDEEEWVEEMRGLMYL 264

[Close]

BLAST of MC04g0038 vs. ExPASy TrEMBL
Match: A0A6J1JLF7 (zinc finger protein CONSTANS-LIKE 5-like OS=Cucurbita maxima OX=3661 GN=LOC111486274 PE=4 SV=1)

HSP 1 Score: 217 bits (553), Expect = 4.98e-68
Identity = 117/176 (66.48%), Postives = 134/176 (76.14%), Query Frame = 0


Query: 3   SAAGSQNLCLGYPQPPDNQFHEFGEQDAFGFGFGLLPHIKPIYHPLPTDNWEIQSSNNQV 62
           +AA  QN C+GY QP D+   ++ +       F L+P  +P+YHPLP DNWEIQS  NQV
Sbjct: 99  NAAPCQNFCVGY-QPDDHPLFQYPDDC-----FRLVPETEPLYHPLPPDNWEIQS--NQV 158

Query: 63  PATDQDDSNNMKVGRYSEEVRKERILRYLKKRNQRNFNKTIKYACRKTLADRRIRVRGRF 122
           P ++    +NMKVGRYSEEVRKERILRYLKKRNQRNFNKTIKYACRKTLADRRIRVRGRF
Sbjct: 159 PVSE---DSNMKVGRYSEEVRKERILRYLKKRNQRNFNKTIKYACRKTLADRRIRVRGRF 218

Query: 123 ARNNEACDQQLNPTKNNNNDDTTESTQLLYNHHDLALQMKKDEEEWLQEITSLMYL 178
           ARNNEACDQQLNPTK N+       TQLLYN   +  Q KKDEEEW++E+T LMYL
Sbjct: 219 ARNNEACDQQLNPTKINHTSIHKVDTQLLYNQDHVGAQRKKDEEEWVEEMTGLMYL 263

[Close]

BLAST of MC04g0038 vs. ExPASy TrEMBL
Match: A0A6J1ES17 (zinc finger protein CONSTANS-LIKE 5-like OS=Cucurbita moschata OX=3662 GN=LOC111437041 PE=4 SV=1)

HSP 1 Score: 212 bits (539), Expect = 6.78e-66
Identity = 115/176 (65.34%), Postives = 133/176 (75.57%), Query Frame = 0


Query: 3   SAAGSQNLCLGYPQPPDNQFHEFGEQDAFGFGFGLLPHIKPIYHPLPTDNWEIQSSNNQV 62
           +AA  Q+ C+GY QP D+   ++ +       F L+P  +P+YHPLP DNWEIQSS  QV
Sbjct: 100 NAAPCQSFCVGY-QPDDHPLFQYPDDC-----FRLVPETEPLYHPLPPDNWEIQSS--QV 159

Query: 63  PATDQDDSNNMKVGRYSEEVRKERILRYLKKRNQRNFNKTIKYACRKTLADRRIRVRGRF 122
           P ++    +NMKVGRYSEEVRKERILRYLKKRNQRNFNKTIKYACRKTLADRRIRVRGRF
Sbjct: 160 PVSE---DSNMKVGRYSEEVRKERILRYLKKRNQRNFNKTIKYACRKTLADRRIRVRGRF 219

Query: 123 ARNNEACDQQLNPTKNNNNDDTTESTQLLYNHHDLALQMKKDEEEWLQEITSLMYL 178
           ARNNEACDQQLNPTK N+       TQLLYN   +  Q KKDEEEW++E+  LMYL
Sbjct: 220 ARNNEACDQQLNPTKINHTCIHKADTQLLYNRDHVGAQRKKDEEEWVEEMRGLMYL 264

[Close]

BLAST of MC04g0038 vs. ExPASy TrEMBL
Match: A0A6J1I2H1 (uncharacterized protein LOC111468419 OS=Cucurbita maxima OX=3661 GN=LOC111468419 PE=4 SV=1)

HSP 1 Score: 199 bits (507), Expect = 3.39e-61
Identity = 115/176 (65.34%), Postives = 130/176 (73.86%), Query Frame = 0


Query: 6   GSQNLCLGYPQPPDNQFHEFGEQDAFGFGFGLLPHIKPIYHPLPTDNWEIQSSNNQVPAT 65
           G QN CL      D+ FHEF + D FG    L+P IKP+Y PLP  NWEIQS  N+VP  
Sbjct: 99  GCQNSCL------DHHFHEF-QDDCFG----LVPEIKPLYQPLPPHNWEIQS--NEVPVA 158

Query: 66  DQDDSNNMKVGRYSEEVRKERILRYLKKRNQRNFNKTIKYACRKTLADRRIRVRGRFARN 125
           +    +N+KVGRYSEEVRKERILRYLKKRNQRNF KTIKYACRKTLADRRIRVRGRFARN
Sbjct: 159 E---DSNIKVGRYSEEVRKERILRYLKKRNQRNFTKTIKYACRKTLADRRIRVRGRFARN 218

Query: 126 NEACDQQLNPTKNNNNDDTT---ESTQLLYNHHDLALQMKKDEEEWLQEITSLMYL 178
           NEACDQ+ NP KN    DT       +L+YNH +L +Q+KKDEEEW QE+ SLMYL
Sbjct: 219 NEACDQEPNPAKN----DTCILHMDNELVYNH-ELGVQLKKDEEEWEQEMRSLMYL 253

[Close]

BLAST of MC04g0038 vs. ExPASy TrEMBL
Match: A0A0A0K3I7 (CCT domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_7G237850 PE=4 SV=1)

HSP 1 Score: 197 bits (501), Expect = 4.43e-60
Identity = 113/173 (65.32%), Postives = 127/173 (73.41%), Query Frame = 0


Query: 9   NLCLGYPQPPDNQFHEFGEQDAFGFGFGLLPHIKPIYH--PLPTDNWEIQSSNNQVPATD 68
           N  LG   P    F EF +       FGL+P IKP ++  PLPT NW+ QS  NQV   +
Sbjct: 107 NSHLGCQLPDHQLFSEFHDDC-----FGLVPEIKPSFYNNPLPTHNWDNQS--NQVSVAE 166

Query: 69  QDDSNNMKVGRYSEEVRKERILRYLKKRNQRNFNKTIKYACRKTLADRRIRVRGRFARNN 128
               +NMKVGRYSEEVRKERILRYLKKRNQRNFNKTIKYACRKTLADRRIRVRGRFAR N
Sbjct: 167 ---DSNMKVGRYSEEVRKERILRYLKKRNQRNFNKTIKYACRKTLADRRIRVRGRFARKN 226

Query: 129 EAC-DQQLNPTKNNNNDDTTESTQLLYNHHDLALQMKKDEEEWLQEITSLMYL 178
           EA  DQ+LNPT  NN+    + T+LLYNHHD  +QMK DEEEWLQ+I+SLMYL
Sbjct: 227 EAISDQELNPTIKNNDTTIQKDTELLYNHHDFGVQMKGDEEEWLQDISSLMYL 269

[Close]

BLAST of MC04g0038 vs. ExPASy TrEMBL
Match: A0A5A7U7B4 (Zinc finger protein CONSTANS-LIKE 5 OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold511G00300 PE=4 SV=1)

HSP 1 Score: 196 bits (497), Expect = 2.61e-59
Identity = 112/174 (64.37%), Postives = 130/174 (74.71%), Query Frame = 0


Query: 9   NLCLGYPQPPDNQFHEFGEQDAFGFGFGLLPHIKPIYH---PLPTDNWEIQSSNNQVPAT 68
           N  LG   P    F+EF + D FG    L+P IKP ++   PLPT N + QS  NQV   
Sbjct: 119 NCHLGCQLPDHQLFYEF-QDDCFG----LVPEIKPSFYNNNPLPTHNGDNQS--NQVSVA 178

Query: 69  DQDDSNNMKVGRYSEEVRKERILRYLKKRNQRNFNKTIKYACRKTLADRRIRVRGRFARN 128
           +    +NMKVGRYSEEVRK+RILRYLKKRNQRNFNKTIKYACRKTLADRRIRVRGRFARN
Sbjct: 179 E---DSNMKVGRYSEEVRKQRILRYLKKRNQRNFNKTIKYACRKTLADRRIRVRGRFARN 238

Query: 129 NEAC-DQQLNPTKNNNNDDTTESTQLLYNHHDLALQMKKDEEEWLQEITSLMYL 178
           NEA  DQ++NPT  NN+    + T+LLYNHHD  +QMK+DEEEWLQEI+S+MYL
Sbjct: 239 NEAISDQEVNPTTMNNDTTIQKDTELLYNHHDFGVQMKRDEEEWLQEISSIMYL 282

[Close]

BLAST of MC04g0038 vs. TAIR 10
Match: AT3G12890.1 (activator of spomin::LUC2 )

HSP 1 Score: 122.9 bits (307), Expect = 2.7e-28
Identity = 75/153 (49.02%), Postives = 95/153 (62.09%), Query Frame = 0


Query: 22  FHEFGEQDAFGFGFGLLPHIKPIYHPLPTDNWEIQSSNNQVPATDQDDSNNMKVGRYSEE 81
           FH    Q+ +GF     P IKP++ P   +    QS  N       +   N KVGRYS E
Sbjct: 88  FHGGDHQEYYGFS----PEIKPLFRPATGE----QSWGNSEGGIQAEP--NTKVGRYSVE 147

Query: 82  VRKERILRYLKKRNQRNFNKTIKYACRKTLADRRIRVRGRFARNNEACDQQLNPTKNNNN 141
            RK+RI+RYLKK+NQRNFNKTIKY CRKTLADRR+RVRGRFARNN+ C++Q + +KN+NN
Sbjct: 148 ERKDRIMRYLKKKNQRNFNKTIKYVCRKTLADRRVRVRGRFARNNDTCEEQPHMSKNHNN 207

Query: 142 DDTTESTQLLYNHHDLALQMKKDEEEWLQEITS 175
               E   +     D  +QM+ D + WL E  S
Sbjct: 208 HSEKEE-DMFSGSDDYLIQMEHD-DGWLHEAMS 228

[Close]

BLAST of MC04g0038 vs. TAIR 10
Match: AT5G41380.1 (CCT motif family protein )

HSP 1 Score: 87.0 bits (214), Expect = 1.6e-17
Identity = 49/82 (59.76%), Postives = 61/82 (74.39%), Query Frame = 0


Query: 51  DNWEIQ--SSNNQVPATDQDDSNNMKVGRYSEEVRKERILRYLKKRNQRNFNKTIKYACR 110
           +N E+Q  S N+ +P +++    N KVGRYS E RKE+I +Y  KRNQRNF KTIKYACR
Sbjct: 184 NNMEMQRSSENSTMPFSEE---QNFKVGRYSAEERKEKISKYRAKRNQRNFTKTIKYACR 243

Query: 111 KTLADRRIRVRGRFARNNEACD 131
           KTLAD R R+RGRFARN+E  +
Sbjct: 244 KTLADSRPRIRGRFARNDEVVE 262

[Close]

BLAST of MC04g0038 vs. TAIR 10
Match: AT1G63820.1 (CCT motif family protein )

HSP 1 Score: 82.0 bits (201), Expect = 5.2e-16
Identity = 48/81 (59.26%), Postives = 57/81 (70.37%), Query Frame = 0


Query: 69  DSNNMKVGRYSEEVRKERILRYLKKRNQRNFNKTIKYACRKTLADRRIRVRGRFARNNEA 128
           D  +++VGRYS E RKE+I +Y  KR QRNF KTIKYACRKTLAD R RVRGRFARN+E 
Sbjct: 178 DEQSLRVGRYSSEERKEKISKYRAKRTQRNFTKTIKYACRKTLADNRPRVRGRFARNDEV 237

Query: 129 CDQQLNP------TKNNNNDD 144
            +   NP      T+  N+DD
Sbjct: 238 FE---NPKIASSFTRQENDDD 255

[Close]

BLAST of MC04g0038 vs. TAIR 10
Match: AT1G04500.1 (CCT motif family protein )

HSP 1 Score: 80.1 bits (196), Expect = 2.0e-15
Identity = 52/116 (44.83%), Postives = 67/116 (57.76%), Query Frame = 0


Query: 41  IKPIYHPLPTDNWEIQSSNNQ-------------VPATDQDDSNNMKVGRYSEEVRKERI 100
           IKPI++P       +    NQ                T  DD +  KVG+ S E RKE+I
Sbjct: 233 IKPIFNPGDHHLQGLDGVENQNHMVAQPVLPQLGTEITGLDDPSFNKVGKLSAEQRKEKI 292

Query: 101 LRYLKKRNQRNFNKTIKYACRKTLADRRIRVRGRFARNNEACDQQLNPTKNNNNDD 144
            RY+KKRN+RNF+K IKYACRKTLAD R RVRGRFA+N+E  +       +++ DD
Sbjct: 293 HRYMKKRNERNFSKKIKYACRKTLADSRPRVRGRFAKNDEFGEPNRQACSSHHEDD 348

[Close]

BLAST of MC04g0038 vs. TAIR 10
Match: AT2G33350.1 (CCT motif family protein )

HSP 1 Score: 80.1 bits (196), Expect = 2.0e-15
Identity = 44/76 (57.89%), Postives = 57/76 (75.00%), Query Frame = 0


Query: 68  DDSNNMKVGRYSEEVRKERILRYLKKRNQRNFNKTIKYACRKTLADRRIRVRGRFARNNE 127
           +DS   KVG+ S E RKE+I RY+KKRN+RNFNK IKYACRKTLAD R RVRGRFA+N+E
Sbjct: 296 EDSTLNKVGKLSPEQRKEKIRRYMKKRNERNFNKKIKYACRKTLADSRPRVRGRFAKNDE 355

Query: 128 ACDQQLNPTKNNNNDD 144
             +       ++++D+
Sbjct: 356 FGEPNRQAFSSHHDDE 371

The following BLAST results are available for this feature:

BLAST of MC04g0038 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q940T9	6.9e-05	40.00	Zinc finger protein CONSTANS-LIKE 4 OS=Arabidopsis thaliana OX=3702 GN=COL4 PE=2...	[more]
Q9SK53	1.5e-04	50.00	Zinc finger protein CONSTANS-LIKE 3 OS=Arabidopsis thaliana OX=3702 GN=COL3 PE=1...	[more]
Q9FHH8	2.0e-04	40.85	Zinc finger protein CONSTANS-LIKE 5 OS=Arabidopsis thaliana OX=3702 GN=COL5 PE=2...	[more]
O50055	3.4e-04	37.66	Zinc finger protein CONSTANS-LIKE 1 OS=Arabidopsis thaliana OX=3702 GN=COL1 PE=1...	[more]
Q39057	3.4e-04	44.44	Zinc finger protein CONSTANS OS=Arabidopsis thaliana OX=3702 GN=CO PE=1 SV=1	[more]

BLAST of MC04g0038 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_038888885.1	2.84e-69	69.06	two-component response regulator-like APRR1 [Benincasa hispida]	[more]
XP_023530352.1	3.61e-68	66.48	zinc finger protein CONSTANS-LIKE 5-like [Cucurbita pepo subsp. pepo]	[more]
XP_022989100.1	1.03e-67	66.48	zinc finger protein CONSTANS-LIKE 5-like [Cucurbita maxima]	[more]
XP_022930639.1	1.40e-65	65.34	zinc finger protein CONSTANS-LIKE 5-like [Cucurbita moschata]	[more]
KAG6589308.1	1.98e-65	64.77	Zinc finger protein CONSTANS-LIKE 5, partial [Cucurbita argyrosperma subsp. soro...	[more]

BLAST of MC04g0038 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1JLF7	4.98e-68	66.48	zinc finger protein CONSTANS-LIKE 5-like OS=Cucurbita maxima OX=3661 GN=LOC11148...	[more]
A0A6J1ES17	6.78e-66	65.34	zinc finger protein CONSTANS-LIKE 5-like OS=Cucurbita moschata OX=3662 GN=LOC111...	[more]
A0A6J1I2H1	3.39e-61	65.34	uncharacterized protein LOC111468419 OS=Cucurbita maxima OX=3661 GN=LOC111468419...	[more]
A0A0A0K3I7	4.43e-60	65.32	CCT domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_7G237850 PE=4 SV...	[more]
A0A5A7U7B4	2.61e-59	64.37	Zinc finger protein CONSTANS-LIKE 5 OS=Cucumis melo var. makuwa OX=1194695 GN=E6...	[more]

BLAST of MC04g0038 vs. TAIR 10


Match Name	E-value	Identity	Description
AT3G12890.1	2.7e-28	49.02	activator of spomin::LUC2	[more]
AT5G41380.1	1.6e-17	59.76	CCT motif family protein	[more]
AT1G63820.1	5.2e-16	59.26	CCT motif family protein	[more]
AT1G04500.1	2.0e-15	44.83	CCT motif family protein	[more]
AT2G33350.1	2.0e-15	57.89	CCT motif family protein	[more]

InterPro

Analysis Name: InterPro Annotations of Bitter gourd (Dali-11) v1
Date Performed: 2021-10-25

Position :

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IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR010402	CCT domain	PFAM	PF06203	CCT	coord: 83..125 e-value: 8.4E-17 score: 61.0
IPR010402	CCT domain	PROSITE	PS51017	CCT	coord: 83..125 score: 14.8622
None	No IPR available	PANTHER	PTHR31717	ZINC FINGER PROTEIN CONSTANS-LIKE 10	coord: 28..178
None	No IPR available	PANTHER	PTHR31717:SF56	ACTIVATOR OF SPOMIN::LUC2	coord: 28..178

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
MC04g0038.1	MC04g0038.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
molecular_function	GO:0005515	protein binding