MC03g_new0446 (gene) Bitter gourd (Dali-11) v1

Overview
NameMC03g_new0446
Typegene
OrganismMomordica charantia cv. Dali-11 (Bitter gourd (Dali-11) v1)
DescriptionUnknown protein
LocationMC03: 19201820 .. 19202098 (+)
RNA-Seq ExpressionMC03g_new0446
SyntenyMC03g_new0446
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGCAAAAGATCGAGAACAGAAGGGGAAGCTTTTTGGAATTAACAAGGGTCCTGGCAAGTGGGGGCAAGTGTAACTTGGTGGTTCCGTCAGATGTTGACTTCAAAGGGTGGATAACCTTCAGAGAAATGCTACTGAACTTCATGAACGCTAAAGAGGAGAATGATCAGAAGCAAAGTACAACAAGGGTTAAGTCTTACGCAGAGATGGTCAAGCCCCAAAAAATTCTACCTCTACCAGAGATGGTCAAGCCCCAGAACAAGGAGAAGAAGGAGATTTAA

mRNA sequence

ATGCAAAAGATCGAGAACAGAAGGGGAAGCTTTTTGGAATTAACAAGGGTCCTGGCAAGTGGGGGCAAGTGTAACTTGGTGGTTCCGTCAGATGTTGACTTCAAAGGGTGGATAACCTTCAGAGAAATGCTACTGAACTTCATGAACGCTAAAGAGGAGAATGATCAGAAGCAAAGTACAACAAGGGTTAAGTCTTACGCAGAGATGGTCAAGCCCCAAAAAATTCTACCTCTACCAGAGATGGTCAAGCCCCAGAACAAGGAGAAGAAGGAGATTTAA

Coding sequence (CDS)

ATGCAAAAGATCGAGAACAGAAGGGGAAGCTTTTTGGAATTAACAAGGGTCCTGGCAAGTGGGGGCAAGTGTAACTTGGTGGTTCCGTCAGATGTTGACTTCAAAGGGTGGATAACCTTCAGAGAAATGCTACTGAACTTCATGAACGCTAAAGAGGAGAATGATCAGAAGCAAAGTACAACAAGGGTTAAGTCTTACGCAGAGATGGTCAAGCCCCAAAAAATTCTACCTCTACCAGAGATGGTCAAGCCCCAGAACAAGGAGAAGAAGGAGATTTAA

Protein sequence

MQKIENRRGSFLELTRVLASGGKCNLVVPSDVDFKGWITFREMLLNFMNAKEENDQKQSTTRVKSYAEMVKPQKILPLPEMVKPQNKEKKEI
Homology
BLAST of MC03g_new0446 vs. NCBI nr
Match: XP_031737554.1 (transcription factor Pur-alpha 1-like [Cucumis sativus])

HSP 1 Score: 65.5 bits (158), Expect = 6.43e-11
Identity = 28/49 (57.14%), Postives = 40/49 (81.63%), Query Frame = 0

Query: 1   MQKIENRRGSFLELTRVLASGGKCNLVVPSDVDFKGWITFREMLLNFMN 49
           +QK  N+RGSFLE+++VL SG K N+VVP+ VD KGW +FR +L++F+N
Sbjct: 81  IQKTTNKRGSFLEISKVLKSGKKGNIVVPAGVDLKGWESFRRLLMDFLN 129

BLAST of MC03g_new0446 vs. NCBI nr
Match: TYK18363.1 (hypothetical protein E5676_scaffold456G00820 [Cucumis melo var. makuwa])

HSP 1 Score: 50.4 bits (119), Expect = 1.13e-04
Identity = 26/62 (41.94%), Postives = 37/62 (59.68%), Query Frame = 0

Query: 1   MQKIENRRGSFLELTRVLASGGKCNLVVPSDVDFKGWITFREMLLNFMNAKEENDQKQST 60
           +QKI NRRG   E+ RV   G KC ++VP  +D  GW  F +ML      K+ +D+K+ +
Sbjct: 83  VQKIHNRRGYIAEIYRVDDRGRKCCILVPEGLDKTGWALFNDML----TCKKTSDKKEIS 140

Query: 61  TR 62
           TR
Sbjct: 143 TR 140

BLAST of MC03g_new0446 vs. NCBI nr
Match: KAA0063662.1 (hypothetical protein E6C27_scaffold329G001780 [Cucumis melo var. makuwa])

HSP 1 Score: 50.4 bits (119), Expect = 1.16e-04
Identity = 26/62 (41.94%), Postives = 37/62 (59.68%), Query Frame = 0

Query: 1   MQKIENRRGSFLELTRVLASGGKCNLVVPSDVDFKGWITFREMLLNFMNAKEENDQKQST 60
           +QKI NRRG   E+ RV   G KC ++VP  +D  GW  F +ML      K+ +D+K+ +
Sbjct: 83  VQKIHNRRGYIAEIYRVDDRGRKCCILVPEGLDKTGWALFNDML----TCKKTSDKKEIS 140

Query: 61  TR 62
           TR
Sbjct: 143 TR 140

BLAST of MC03g_new0446 vs. NCBI nr
Match: KAA0041398.1 (hypothetical protein E6C27_scaffold206G00440 [Cucumis melo var. makuwa])

HSP 1 Score: 50.1 bits (118), Expect = 1.67e-04
Identity = 26/62 (41.94%), Postives = 37/62 (59.68%), Query Frame = 0

Query: 1   MQKIENRRGSFLELTRVLASGGKCNLVVPSDVDFKGWITFREMLLNFMNAKEENDQKQST 60
           +QKI NRRG   E+ RV   G KC ++VP  +D  GW  F +ML      K+ +D+K+ +
Sbjct: 83  VQKIHNRRGYIAEIYRVDDRGRKCCILVPEGLDKTGWALFSDML----TCKKTSDKKEIS 140

Query: 61  TR 62
           TR
Sbjct: 143 TR 140

BLAST of MC03g_new0446 vs. NCBI nr
Match: TYK29576.1 (hypothetical protein E5676_scaffold655G001820 [Cucumis melo var. makuwa])

HSP 1 Score: 48.5 bits (114), Expect = 5.84e-04
Identity = 25/62 (40.32%), Postives = 36/62 (58.06%), Query Frame = 0

Query: 1   MQKIENRRGSFLELTRVLASGGKCNLVVPSDVDFKGWITFREMLLNFMNAKEENDQKQST 60
           +Q I NRRG   E+ RV   G KC ++VP  +D  GW  F +ML      K+ +D+K++ 
Sbjct: 83  VQTIHNRRGYIAEIYRVDDRGRKCCILVPEGLDKTGWALFNDML----TCKKTSDKKETP 140

Query: 61  TR 62
           TR
Sbjct: 143 TR 140

BLAST of MC03g_new0446 vs. ExPASy TrEMBL
Match: A0A0A0L427 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_4G572310 PE=4 SV=1)

HSP 1 Score: 66.6 bits (161), Expect = 1.18e-10
Identity = 29/53 (54.72%), Postives = 42/53 (79.25%), Query Frame = 0

Query: 1   MQKIENRRGSFLELTRVLASGGKCNLVVPSDVDFKGWITFREMLLNFMNAKEE 53
           +Q+  N+RGSFLE+++VL SG K N+VVP+ +D KGW  FR +LL+F+NA+ E
Sbjct: 317 IQETTNKRGSFLEISKVLKSGKKGNIVVPAGIDLKGWEQFRRLLLDFLNAEYE 369

BLAST of MC03g_new0446 vs. ExPASy TrEMBL
Match: A0A5D3D494 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold456G00820 PE=4 SV=1)

HSP 1 Score: 50.4 bits (119), Expect = 5.45e-05
Identity = 26/62 (41.94%), Postives = 37/62 (59.68%), Query Frame = 0

Query: 1   MQKIENRRGSFLELTRVLASGGKCNLVVPSDVDFKGWITFREMLLNFMNAKEENDQKQST 60
           +QKI NRRG   E+ RV   G KC ++VP  +D  GW  F +ML      K+ +D+K+ +
Sbjct: 83  VQKIHNRRGYIAEIYRVDDRGRKCCILVPEGLDKTGWALFNDML----TCKKTSDKKEIS 140

Query: 61  TR 62
           TR
Sbjct: 143 TR 140

BLAST of MC03g_new0446 vs. ExPASy TrEMBL
Match: A0A5A7V5Z9 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold329G001780 PE=4 SV=1)

HSP 1 Score: 50.4 bits (119), Expect = 5.61e-05
Identity = 26/62 (41.94%), Postives = 37/62 (59.68%), Query Frame = 0

Query: 1   MQKIENRRGSFLELTRVLASGGKCNLVVPSDVDFKGWITFREMLLNFMNAKEENDQKQST 60
           +QKI NRRG   E+ RV   G KC ++VP  +D  GW  F +ML      K+ +D+K+ +
Sbjct: 83  VQKIHNRRGYIAEIYRVDDRGRKCCILVPEGLDKTGWALFNDML----TCKKTSDKKEIS 140

Query: 61  TR 62
           TR
Sbjct: 143 TR 140

BLAST of MC03g_new0446 vs. ExPASy TrEMBL
Match: A0A5A7TEP0 (DUF4283 domain-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold206G00440 PE=4 SV=1)

HSP 1 Score: 50.1 bits (118), Expect = 8.07e-05
Identity = 26/62 (41.94%), Postives = 37/62 (59.68%), Query Frame = 0

Query: 1   MQKIENRRGSFLELTRVLASGGKCNLVVPSDVDFKGWITFREMLLNFMNAKEENDQKQST 60
           +QKI NRRG   E+ RV   G KC ++VP  +D  GW  F +ML      K+ +D+K+ +
Sbjct: 83  VQKIHNRRGYIAEIYRVDDRGRKCCILVPEGLDKTGWALFSDML----TCKKTSDKKEIS 140

Query: 61  TR 62
           TR
Sbjct: 143 TR 140

BLAST of MC03g_new0446 vs. ExPASy TrEMBL
Match: A0A5D3E0Y8 (DUF4283 domain-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold655G001820 PE=4 SV=1)

HSP 1 Score: 48.5 bits (114), Expect = 2.83e-04
Identity = 25/62 (40.32%), Postives = 36/62 (58.06%), Query Frame = 0

Query: 1   MQKIENRRGSFLELTRVLASGGKCNLVVPSDVDFKGWITFREMLLNFMNAKEENDQKQST 60
           +Q I NRRG   E+ RV   G KC ++VP  +D  GW  F +ML      K+ +D+K++ 
Sbjct: 83  VQTIHNRRGYIAEIYRVDDRGRKCCILVPEGLDKTGWALFNDML----TCKKTSDKKETP 140

Query: 61  TR 62
           TR
Sbjct: 143 TR 140

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
XP_031737554.16.43e-1157.14transcription factor Pur-alpha 1-like [Cucumis sativus][more]
TYK18363.11.13e-0441.94hypothetical protein E5676_scaffold456G00820 [Cucumis melo var. makuwa][more]
KAA0063662.11.16e-0441.94hypothetical protein E6C27_scaffold329G001780 [Cucumis melo var. makuwa][more]
KAA0041398.11.67e-0441.94hypothetical protein E6C27_scaffold206G00440 [Cucumis melo var. makuwa][more]
TYK29576.15.84e-0440.32hypothetical protein E5676_scaffold655G001820 [Cucumis melo var. makuwa][more]
Match NameE-valueIdentityDescription
A0A0A0L4271.18e-1054.72Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_4G572310 PE=4 SV=1[more]
A0A5D3D4945.45e-0541.94Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold... [more]
A0A5A7V5Z95.61e-0541.94Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold... [more]
A0A5A7TEP08.07e-0541.94DUF4283 domain-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C2... [more]
A0A5D3E0Y82.83e-0440.32DUF4283 domain-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E567... [more]
Match NameE-valueIdentityDescription
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
MC03g_new0446.1MC03g_new0446.1mRNA