MC03g_new0441 (gene) Bitter gourd (Dali-11) v1

Overview


Name	MC03g_new0441
Type	gene
Organism	Momordica charantia cv. Dali-11 (Bitter gourd (Dali-11) v1)
Description	Unknown protein
Location	MC03: 18939895 .. 18941775 (+)
RNA-Seq Expression	MC03g_new0441
Synteny	MC03g_new0441

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGCTTCTTCAAATTCACCCCAACTCAGCGATGATGATGATGATTTTGGTGATGAACCCCGTGAGATGACCATCCATGATGATGCTTATTTTGGTAATGAACCCCGTGAGATGACCTTAGAAGAGGAGATAGAATACTATATTGCCTTGAAGAAAACTGAGGTTTTTTATCCTTCTTTTCATTATATTACTATATCACCTTAGTTTATTTGTTTGTCTTCATATTTTTATTTGTATGCATGAATACAGGGTTTTGACATGCCCTCTTTTCCCGATTCTTATGCTTGTGGTCGTATTGAGACTATAACTGGGAGTCGATTACATTCGGAAGAGCTTCAAGAATGCGCAGACAAAGACAAAGCTGTTGACTATTTCAATCAACAAAATGTATTCATTATCTTCCCATTATCTTCCCATTATAATTTGTATGTTTTCAACTTTGATATGTAGTTTTGATCATATTTATTATGAATGTAGGGTACAAGTTTTGAATTTGTAAAGATGGTGAAGGCAACTAATAAAGCTGTTGTTGGTATAATGTACTACCTCACTTTTGAAGTCAAGCAAATGGGATCGCCTCCAAACTCTCCCACCAAAACACTCCAAGCTCGAGTGTTGCGTGGTCTTCCTATTGGCCATTTTGATGTAGAACTATGCAGGCCAGAACCCTCTACTTCTAGTTGAAGTAGAGTACCACCAACAATCTACCATTTATCTCAACTCTATTAGTATTTCAATTTTAATCTTTCAATTTTAATCTTTCAAACACTATGATGTGGAACCATGATTTTAATATACTTATGTGCAAAGCTAGCTACTAATGTTTAGTATTTATGTTGATATCTAGAGTTTTAACCTCACTTAGAATTCAAATGATTATGTTAATGGATTAGATATATTTAACTAATTTAATTTATATTATTGATACAATGGTCATAAATATCAATTTAACCAATAAAAATGCAATTATAACATAATTAAGGGTGTGTGGCACGTAATCAATGATTAAATTTCATTTAACAATTAAAAGACTGTAAGATCAGATTATGATCCATGAGAAATTAAAGGATTCATAGGAGGGAAGTTTTGATGGAACACAGAAAAAAGAGGTCTTGCCTAGTTAATTACTGGAACTACTCTCTCATACTCATACACCTATTACCCATTTAGCTTTGATATATCGAAATTGAAGTGTTTTCGTTTAACCTCTCTATATATATATATTATTTGGAAAGGAAACCATTCCATTCAAAGCTACATAAATTATGAAATGATAAAATGGAATTGAGAAAGAGAGAGTTGTAAGAACAAAAATGCAACAATTTTAATTTTTCCCGGAAGGTATATTTAATTTGTATTTGGAAATTAAAAATGGAATATCCATATGCCACACACAATAAATCAATAAGCAATAGCAAACGAAGTAGGCTAAAGCAACCACAGCCGCCGCATATGGAAGAACCAATATCATAGAGACCAACAAACTGATCGCCCAAACAATTGGCAGATCGAAATTCCAATGTTTGCGAGTTCTCAATTCCATTAACCAATTATAAATGGTGATAAAAGGAAATTCCAAATTATATTTTCTAAAATTGTTCTTTTGATTTTTTTTCAGATGTATCGAAGAGTGAGAGTGAGAGAGAGAGAGAGGTCCTCCGTTGGGCTATGGCCATCGAGAAGAAAGAATTTAAATTGCTACCCGATCAACGTGCCAGAGGTAACAATGTCATCCTTGCAGAAATTGGGGCTTACAAATCTTTCACAAGGTTTGCACTGCTCGTAAACGTCAAAACTTTATCTCAGAGATCACTGATCAAGCTGGAAATAGCCTTACTACGGACCATCAAATGGAAGAAGCAGAAGCAATTGGTTTTTTAA

mRNA sequence

ATGGCTTCTTCAAATTCACCCCAACTCAGCGATGATGATGATGATTTTGGTGATGAACCCCGTGAGATGACCATCCATGATGATGCTTATTTTGATGTATCGAAGAGTGAGAGTGAGAGAGAGAGAGAGGTCCTCCGTTGGGCTATGGCCATCGAGAAGAAAGAATTTAAATTGCTACCCGATCAACGTGCCAGAGGTAACAATGTCATCCTTGCAGAAATTGGGGCTTACAAATCTTTCACAAGGTTTGCACTGCTCGTAAACGTCAAAACTTTATCTCAGAGATCACTGATCAAGCTGGAAATAGCCTTACTACGGACCATCAAATGGAAGAAGCAGAAGCAATTGGTTTTTTAA

Coding sequence (CDS)

ATGGCTTCTTCAAATTCACCCCAACTCAGCGATGATGATGATGATTTTGGTGATGAACCCCGTGAGATGACCATCCATGATGATGCTTATTTTGATGTATCGAAGAGTGAGAGTGAGAGAGAGAGAGAGGTCCTCCGTTGGGCTATGGCCATCGAGAAGAAAGAATTTAAATTGCTACCCGATCAACGTGCCAGAGGTAACAATGTCATCCTTGCAGAAATTGGGGCTTACAAATCTTTCACAAGGTTTGCACTGCTCGTAAACGTCAAAACTTTATCTCAGAGATCACTGATCAAGCTGGAAATAGCCTTACTACGGACCATCAAATGGAAGAAGCAGAAGCAATTGGTTTTTTAA

Protein sequence

MASSNSPQLSDDDDDFGDEPREMTIHDDAYFDVSKSESEREREVLRWAMAIEKKEFKLLPDQRARGNNVILAEIGAYKSFTRFALLVNVKTLSQRSLIKLEIALLRTIKWKKQKQLVF

Homology

[Close]

BLAST of MC03g_new0441 vs. NCBI nr
Match: XP_022137526.1 (uncharacterized protein LOC111008952 [Momordica charantia] >XP_022137527.1 uncharacterized protein LOC111008952 [Momordica charantia])

HSP 1 Score: 67.8 bits (164), Expect = 2.83e-11
Identity = 41/70 (58.57%), Postives = 46/70 (65.71%), Query Frame = 0


Query: 1  MASSNSPQLSDDDDDFGDEPREMTIHDDAYFDVSKSESEREREVLRWAMAIEKKE---FK 60
          MASSNSPQLSDDDDDFGDEPREMTIHDDAYF     E   E E+  + +A++K E     
Sbjct: 1  MASSNSPQLSDDDDDFGDEPREMTIHDDAYFGNEPREMTLEEEI-EYYIALKKTEGFDMP 60

Query: 61 LLPDQRARGN 67
            PD  A G 
Sbjct: 61 SFPDSYACGR 69

[Close]

BLAST of MC03g_new0441 vs. ExPASy TrEMBL
Match: A0A6J1C8H7 (uncharacterized protein LOC111008952 OS=Momordica charantia OX=3673 GN=LOC111008952 PE=4 SV=1)

HSP 1 Score: 67.8 bits (164), Expect = 1.37e-11
Identity = 41/70 (58.57%), Postives = 46/70 (65.71%), Query Frame = 0


Query: 1  MASSNSPQLSDDDDDFGDEPREMTIHDDAYFDVSKSESEREREVLRWAMAIEKKE---FK 60
          MASSNSPQLSDDDDDFGDEPREMTIHDDAYF     E   E E+  + +A++K E     
Sbjct: 1  MASSNSPQLSDDDDDFGDEPREMTIHDDAYFGNEPREMTLEEEI-EYYIALKKTEGFDMP 60

Query: 61 LLPDQRARGN 67
            PD  A G 
Sbjct: 61 SFPDSYACGR 69

The following BLAST results are available for this feature:

BLAST of MC03g_new0441 vs.


Match Name	E-value	Identity	Description

BLAST of MC03g_new0441 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022137526.1	2.83e-11	58.57	uncharacterized protein LOC111008952 [Momordica charantia] >XP_022137527.1 uncha...	[more]

BLAST of MC03g_new0441 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1C8H7	1.37e-11	58.57	uncharacterized protein LOC111008952 OS=Momordica charantia OX=3673 GN=LOC111008...	[more]

BLAST of MC03g_new0441 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description

InterPro

Analysis Name: InterPro Annotations of Bitter gourd (Dali-11) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..28

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
MC03g_new0441.1	MC03g_new0441.1	mRNA