MC03g_new0317 (gene) Bitter gourd (Dali-11) v1

Overview


Name	MC03g_new0317
Type	gene
Organism	Momordica charantia cv. Dali-11 (Bitter gourd (Dali-11) v1)
Description	Chlorophyll a-b binding protein, chloroplastic
Location	MC03: 13779783 .. 13781149 (-)
RNA-Seq Expression	MC03g_new0317
Synteny	MC03g_new0317

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGCTCTCTCCTCCCCCTCACTCGCCGGAAAGGCGGTGAAGCTCACGCCCTCCTCCCCTGAGCTTCTCGGCAATGGGAGAGTCAGCATGAGGAAATCCGTCTCCAAGTCTGTTTCTTCTGGAAGCCCGTGGTATGGACCTGACCGTGTCAAGTATTTGGGCCCGTTCTCCGGTGAGCCTCCGTCCTACCTAACTGGAGAGTTTCCCGGAGACTATGGTTGGGACACTGCCGGACTTTCTGCAGATCCTGAGACCTTTGCAAAGAACCGCGAACTCGAAGTCATCCACTCCAGGTTAGATTAGAATCAAAGCATAAATTCTTTAAGCATTATTATATATATTGAAACATAGCAAAATTTTTAAAATTTTATCGAAGTATTATAAAATCTAAATGCAACTCAAACCTAAGTACAATGTAAAAAGTATTACAAAAATTATTTTGTTTCTATATATATATATATATATATTTAACTTTCAAAATGTTGATTTTGTATTTTCAACTATGGTTCATTTTAGTGGTACATAGAAATTTTTTAAACAAATTTATTGCTACATTACAAAAACAATCAATGATGGAAGTATCTTGCTAAAACTATGATAGAAATAAATGAAATAGAAGTAAAAATGAAAATACCATAATTATCAGTTTTTAAAAGTAAAAAAACCAAAATAAACGTTTTAAAAATACAACTATTAAAATGAAGTAAAGTAGAAAGTACACCAAACAAAATATTATTTAAACTAAAAAAAATTACACCTATACTAGATTTTAAGAAAATGAAAAGTCACTCCATTTTCTAGAATACATATTAAATTTATGTACAATTCAATTGCTAAAATTTTTCAAATCTCTTGAAAATATATTTGAATTCTCTAGGTGGGCTATGCTTGGGGCCTTGGGCTGCGTGTTCCCGGAGCTTCTATCTCGCAACGGTGTGAAATTCGGGGAAGCGGTATGGTTCAAGGCTGGATCTCAGATCTTCAATGAAGGTGGGCTCGACTACTTGGGCAACCCCAGCTTGATCCACGCACAGAGCATTTTAGCCATTTGGGCTTCCCAAGTAGTTCTAATGGGAGCCGTCGAGGGATACCGTATTGCCGGTGGTCCACTCGGCGAGGTGACCGACCCGATCTACCCGGGTGGGAGCTTTGACCCGTTGGGACTTGCAGATGACCCGGAAGCATTTGCAGAGCTGAAGGTGAAGGAGCTTAAGAATGGAAGGTTGGCGATGTTCTCCATGTTTGGTTTCTTCGTTCAGGCTATTGTCACCGGAAAAGGTCCATTGGAGAACCTTGCTGACCATTTGGCTGACCCAGTCAACAACAATGCTTGGGCTTATGCCACCAACTTTGTTCCTGGAAAATGA

mRNA sequence

ATGGCTCTCTCCTCCCCCTCACTCGCCGGAAAGGCGGTGAAGCTCACGCCCTCCTCCCCTGAGCTTCTCGGCAATGGGAGAGTCAGCATGAGGAAATCCGTCTCCAAGTCTGTTTCTTCTGGAAGCCCGTGGTATGGACCTGACCGTGTCAAGTATTTGGGCCCGTTCTCCGGTGAGCCTCCGTCCTACCTAACTGGAGAGTTTCCCGGAGACTATGGTTGGGACACTGCCGGACTTTCTGCAGATCCTGAGACCTTTGCAAAGAACCGCGAACTCGAAGTCATCCACTCCAGGTGGGCTATGCTTGGGGCCTTGGGCTGCGTGTTCCCGGAGCTTCTATCTCGCAACGGTGTGAAATTCGGGGAAGCGGTATGGTTCAAGGCTGGATCTCAGATCTTCAATGAAGGTGGGCTCGACTACTTGGGCAACCCCAGCTTGATCCACGCACAGAGCATTTTAGCCATTTGGGCTTCCCAAGTAGTTCTAATGGGAGCCGTCGAGGGATACCGTATTGCCGGTGGTCCACTCGGCGAGGTGACCGACCCGATCTACCCGGGTGGGAGCTTTGACCCGTTGGGACTTGCAGATGACCCGGAAGCATTTGCAGAGCTGAAGGTGAAGGAGCTTAAGAATGGAAGGTTGGCGATGTTCTCCATGTTTGGTTTCTTCGTTCAGGCTATTGTCACCGGAAAAGGTCCATTGGAGAACCTTGCTGACCATTTGGCTGACCCAGTCAACAACAATGCTTGGGCTTATGCCACCAACTTTGTTCCTGGAAAATGA

Coding sequence (CDS)

ATGGCTCTCTCCTCCCCCTCACTCGCCGGAAAGGCGGTGAAGCTCACGCCCTCCTCCCCTGAGCTTCTCGGCAATGGGAGAGTCAGCATGAGGAAATCCGTCTCCAAGTCTGTTTCTTCTGGAAGCCCGTGGTATGGACCTGACCGTGTCAAGTATTTGGGCCCGTTCTCCGGTGAGCCTCCGTCCTACCTAACTGGAGAGTTTCCCGGAGACTATGGTTGGGACACTGCCGGACTTTCTGCAGATCCTGAGACCTTTGCAAAGAACCGCGAACTCGAAGTCATCCACTCCAGGTGGGCTATGCTTGGGGCCTTGGGCTGCGTGTTCCCGGAGCTTCTATCTCGCAACGGTGTGAAATTCGGGGAAGCGGTATGGTTCAAGGCTGGATCTCAGATCTTCAATGAAGGTGGGCTCGACTACTTGGGCAACCCCAGCTTGATCCACGCACAGAGCATTTTAGCCATTTGGGCTTCCCAAGTAGTTCTAATGGGAGCCGTCGAGGGATACCGTATTGCCGGTGGTCCACTCGGCGAGGTGACCGACCCGATCTACCCGGGTGGGAGCTTTGACCCGTTGGGACTTGCAGATGACCCGGAAGCATTTGCAGAGCTGAAGGTGAAGGAGCTTAAGAATGGAAGGTTGGCGATGTTCTCCATGTTTGGTTTCTTCGTTCAGGCTATTGTCACCGGAAAAGGTCCATTGGAGAACCTTGCTGACCATTTGGCTGACCCAGTCAACAACAATGCTTGGGCTTATGCCACCAACTTTGTTCCTGGAAAATGA

Protein sequence

MALSSPSLAGKAVKLTPSSPELLGNGRVSMRKSVSKSVSSGSPWYGPDRVKYLGPFSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCVFPELLSRNGVKFGEAVWFKAGSQIFNEGGLDYLGNPSLIHAQSILAIWASQVVLMGAVEGYRIAGGPLGEVTDPIYPGGSFDPLGLADDPEAFAELKVKELKNGRLAMFSMFGFFVQAIVTGKGPLENLADHLADPVNNNAWAYATNFVPGK

Homology

[Close]

BLAST of MC03g_new0317 vs. ExPASy Swiss-Prot
Match: P09756 (Chlorophyll a-b binding protein 3, chloroplastic OS=Glycine max OX=3847 GN=CAB3 PE=3 SV=1)

HSP 1 Score: 508.8 bits (1309), Expect = 3.5e-143
Identity = 247/260 (95.00%), Postives = 254/260 (97.69%), Query Frame = 0


Query: 1   MALSSPSLAGKAVKLTPSSPELLGNGRVSMRKSVSKSVSSGSPWYGPDRVKYLGPFSGEP 60
           MALSSPSLAGKAVKL PS+PE+   GRVSMRK+V+K VSSGSPWYGPDRVKYLGPFSGEP
Sbjct: 7   MALSSPSLAGKAVKLGPSAPEV---GRVSMRKTVTKQVSSGSPWYGPDRVKYLGPFSGEP 66

Query: 61  PSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCVFPELLSRNGVKF 120
           PSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCVFPELLSRNGVKF
Sbjct: 67  PSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCVFPELLSRNGVKF 126

Query: 121 GEAVWFKAGSQIFNEGGLDYLGNPSLIHAQSILAIWASQVVLMGAVEGYRIAGGPLGEVT 180
           GEAVWFKAGSQIF+EGGLDYLGNPSLIHAQSILAIWA+QV+LMGAVEGYRIAGGPLGEVT
Sbjct: 127 GEAVWFKAGSQIFSEGGLDYLGNPSLIHAQSILAIWATQVILMGAVEGYRIAGGPLGEVT 186

Query: 181 DPIYPGGSFDPLGLADDPEAFAELKVKELKNGRLAMFSMFGFFVQAIVTGKGPLENLADH 240
           DPIYPGGSFDPLGLADDPEAFAELKVKELKNGRLAMFSMFGFFVQAIVTGKGPLENLADH
Sbjct: 187 DPIYPGGSFDPLGLADDPEAFAELKVKELKNGRLAMFSMFGFFVQAIVTGKGPLENLADH 246

Query: 241 LADPVNNNAWAYATNFVPGK 261
           LA PVNNNAWAYATNFVPGK
Sbjct: 247 LAGPVNNNAWAYATNFVPGK 263

[Close]

BLAST of MC03g_new0317 vs. ExPASy Swiss-Prot
Match: P08221 (Chlorophyll a-b binding protein of LHCII type I, chloroplastic (Fragment) OS=Cucumis sativus OX=3659 PE=2 SV=1)

HSP 1 Score: 504.6 bits (1298), Expect = 6.7e-142
Identity = 239/255 (93.73%), Postives = 250/255 (98.04%), Query Frame = 0


Query: 6   PSLAGKAVKLTPSSPELLGNGRVSMRKSVSKSVSSGSPWYGPDRVKYLGPFSGEPPSYLT 65
           P+LAG+AVKL+P++PE+ GN + +MRK+ SKSVSSGSPWYGPDRVKYLGPFSGEPPSYLT
Sbjct: 1   PTLAGQAVKLSPNAPEIQGNAKFTMRKTASKSVSSGSPWYGPDRVKYLGPFSGEPPSYLT 60

Query: 66  GEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCVFPELLSRNGVKFGEAVW 125
           GEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCVFPELLSRNGVKFGEAVW
Sbjct: 61  GEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCVFPELLSRNGVKFGEAVW 120

Query: 126 FKAGSQIFNEGGLDYLGNPSLIHAQSILAIWASQVVLMGAVEGYRIAGGPLGEVTDPIYP 185
           FKAGSQIF+EGGLDYLGNPSL+HAQSILAIWA QVVLMGAVEGYRIAGGPLGEVTDPIYP
Sbjct: 121 FKAGSQIFSEGGLDYLGNPSLVHAQSILAIWACQVVLMGAVEGYRIAGGPLGEVTDPIYP 180

Query: 186 GGSFDPLGLADDPEAFAELKVKELKNGRLAMFSMFGFFVQAIVTGKGPLENLADHLADPV 245
           GGSFDPLGLADDPEAFAELKVKELKNGRLAMFSMFGFFVQAIVTGKGPLENLADHLADPV
Sbjct: 181 GGSFDPLGLADDPEAFAELKVKELKNGRLAMFSMFGFFVQAIVTGKGPLENLADHLADPV 240

Query: 246 NNNAWAYATNFVPGK 261
           NNNAWAYATNFVPGK
Sbjct: 241 NNNAWAYATNFVPGK 255

[Close]

BLAST of MC03g_new0317 vs. ExPASy Swiss-Prot
Match: P27493 (Chlorophyll a-b binding protein 21, chloroplastic OS=Nicotiana tabacum OX=4097 GN=CAB21 PE=2 SV=1)

HSP 1 Score: 502.7 bits (1293), Expect = 2.5e-141
Identity = 237/260 (91.15%), Postives = 252/260 (96.92%), Query Frame = 0


Query: 1   MALSSPSLAGKAVKLTPSSPELLGNGRVSMRKSVSKSVSSGSPWYGPDRVKYLGPFSGEP 60
           MALSSPS AG+AVKL+PS+PE+ GNGRVSMRK+V+K V+S SPWYGPDRVKYLGPFSGE 
Sbjct: 6   MALSSPSFAGQAVKLSPSAPEITGNGRVSMRKTVAKPVASSSPWYGPDRVKYLGPFSGES 65

Query: 61  PSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCVFPELLSRNGVKF 120
           PSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIH RWAMLGALGCVFPELL+RNGVKF
Sbjct: 66  PSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELLARNGVKF 125

Query: 121 GEAVWFKAGSQIFNEGGLDYLGNPSLIHAQSILAIWASQVVLMGAVEGYRIAGGPLGEVT 180
           GEAVWFKAGSQIF+EGGLDYLGNPSL+HAQSILAIWA QV+LMGAVEGYR+AGGPLGEV 
Sbjct: 126 GEAVWFKAGSQIFSEGGLDYLGNPSLVHAQSILAIWACQVILMGAVEGYRVAGGPLGEVV 185

Query: 181 DPIYPGGSFDPLGLADDPEAFAELKVKELKNGRLAMFSMFGFFVQAIVTGKGPLENLADH 240
           DP+YPGGSFDPLGLA+DPEAFAELKVKE+KNGRLAMFSMFGFFVQAIVTGKGPLENLADH
Sbjct: 186 DPLYPGGSFDPLGLAEDPEAFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPLENLADH 245

Query: 241 LADPVNNNAWAYATNFVPGK 261
           LADPVNNNAWAYATNFVPGK
Sbjct: 246 LADPVNNNAWAYATNFVPGK 265

[Close]

BLAST of MC03g_new0317 vs. ExPASy Swiss-Prot
Match: P27495 (Chlorophyll a-b binding protein 40, chloroplastic OS=Nicotiana tabacum OX=4097 GN=CAB40 PE=2 SV=1)

HSP 1 Score: 499.2 bits (1284), Expect = 2.8e-140
Identity = 239/262 (91.22%), Postives = 252/262 (96.18%), Query Frame = 0


Query: 1   MALSSPSLAGKAVKLTPSSPELLGNGRVSMRKSVS--KSVSSGSPWYGPDRVKYLGPFSG 60
           MALSSPS AGKAVKL+PSS E+ GNG+V+MRK+ S  K+VSSGSPWYGPDRVKYLGPFSG
Sbjct: 6   MALSSPSFAGKAVKLSPSSSEITGNGKVTMRKTASKAKTVSSGSPWYGPDRVKYLGPFSG 65

Query: 61  EPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCVFPELLSRNGV 120
           E PSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIH RWAMLGALGCVFPELL+RNGV
Sbjct: 66  ESPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELLARNGV 125

Query: 121 KFGEAVWFKAGSQIFNEGGLDYLGNPSLIHAQSILAIWASQVVLMGAVEGYRIAGGPLGE 180
           KFGEAVWFKAGSQIF+EGGLDYLGNPSL+HAQSILAIWA QVVLMGAVEGYR+AGGPLGE
Sbjct: 126 KFGEAVWFKAGSQIFSEGGLDYLGNPSLVHAQSILAIWACQVVLMGAVEGYRVAGGPLGE 185

Query: 181 VTDPIYPGGSFDPLGLADDPEAFAELKVKELKNGRLAMFSMFGFFVQAIVTGKGPLENLA 240
           V DP+YPGGSFDPLGLA+DPEAFAELKVKE+KNGRLAMFSMFGFFVQAIVTGKGPLENLA
Sbjct: 186 VVDPLYPGGSFDPLGLAEDPEAFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPLENLA 245

Query: 241 DHLADPVNNNAWAYATNFVPGK 261
           DHLADPVNNNAWAYATNFVPGK
Sbjct: 246 DHLADPVNNNAWAYATNFVPGK 267

[Close]

BLAST of MC03g_new0317 vs. ExPASy Swiss-Prot
Match: P07370 (Chlorophyll a-b binding protein 1B, chloroplastic OS=Solanum lycopersicum OX=4081 GN=CAB1B PE=3 SV=1)

HSP 1 Score: 496.5 bits (1277), Expect = 1.8e-139
Identity = 235/260 (90.38%), Postives = 250/260 (96.15%), Query Frame = 0


Query: 1   MALSSPSLAGKAVKLTPSSPELLGNGRVSMRKSVSKSVSSGSPWYGPDRVKYLGPFSGEP 60
           MALSSPS AG+AVKL+PS+ E+ GNGR++MRK+V+KS  S SPWYGPDRVKYLGPFSGE 
Sbjct: 6   MALSSPSFAGQAVKLSPSASEISGNGRITMRKAVAKSAPSSSPWYGPDRVKYLGPFSGES 65

Query: 61  PSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCVFPELLSRNGVKF 120
           PSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIH RWAMLGALGCVFPELL+RNGVKF
Sbjct: 66  PSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELLARNGVKF 125

Query: 121 GEAVWFKAGSQIFNEGGLDYLGNPSLIHAQSILAIWASQVVLMGAVEGYRIAGGPLGEVT 180
           GEAVWFKAGSQIF+EGGLDYLGNPSL+HAQSILAIWA QVVLMGAVEGYRIAGGPLGEV 
Sbjct: 126 GEAVWFKAGSQIFSEGGLDYLGNPSLVHAQSILAIWACQVVLMGAVEGYRIAGGPLGEVV 185

Query: 181 DPIYPGGSFDPLGLADDPEAFAELKVKELKNGRLAMFSMFGFFVQAIVTGKGPLENLADH 240
           DP+YPGGSFDPLGLA+DPEAFAELKVKE+KNGRLAMFSMFGFFVQAIVTGKGPLENLADH
Sbjct: 186 DPLYPGGSFDPLGLAEDPEAFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPLENLADH 245

Query: 241 LADPVNNNAWAYATNFVPGK 261
           LADPVNNNAWA+ATNFVPGK
Sbjct: 246 LADPVNNNAWAFATNFVPGK 265

[Close]

BLAST of MC03g_new0317 vs. NCBI nr
Match: XP_022142169.1 (chlorophyll a-b binding protein of LHCII type 1-like [Momordica charantia])

HSP 1 Score: 529 bits (1363), Expect = 1.32e-189
Identity = 259/260 (99.62%), Postives = 259/260 (99.62%), Query Frame = 0


Query: 1   MALSSPSLAGKAVKLTPSSPELLGNGRVSMRKSVSKSVSSGSPWYGPDRVKYLGPFSGEP 60
           MALSSPSLAGKAVKLTPSSPELLGNGRVSMRK VSKSVSSGSPWYGPDRVKYLGPFSGEP
Sbjct: 6   MALSSPSLAGKAVKLTPSSPELLGNGRVSMRKFVSKSVSSGSPWYGPDRVKYLGPFSGEP 65

Query: 61  PSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCVFPELLSRNGVKF 120
           PSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCVFPELLSRNGVKF
Sbjct: 66  PSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCVFPELLSRNGVKF 125

Query: 121 GEAVWFKAGSQIFNEGGLDYLGNPSLIHAQSILAIWASQVVLMGAVEGYRIAGGPLGEVT 180
           GEAVWFKAGSQIFNEGGLDYLGNPSLIHAQSILAIWASQVVLMGAVEGYRIAGGPLGEVT
Sbjct: 126 GEAVWFKAGSQIFNEGGLDYLGNPSLIHAQSILAIWASQVVLMGAVEGYRIAGGPLGEVT 185

Query: 181 DPIYPGGSFDPLGLADDPEAFAELKVKELKNGRLAMFSMFGFFVQAIVTGKGPLENLADH 240
           DPIYPGGSFDPLGLADDPEAFAELKVKELKNGRLAMFSMFGFFVQAIVTGKGPLENLADH
Sbjct: 186 DPIYPGGSFDPLGLADDPEAFAELKVKELKNGRLAMFSMFGFFVQAIVTGKGPLENLADH 245

Query: 241 LADPVNNNAWAYATNFVPGK 260
           LADPVNNNAWAYATNFVPGK
Sbjct: 246 LADPVNNNAWAYATNFVPGK 265

[Close]

BLAST of MC03g_new0317 vs. NCBI nr
Match: XP_022142175.1 (chlorophyll a-b binding protein of LHCII type 1-like [Momordica charantia])

HSP 1 Score: 524 bits (1349), Expect = 2.50e-187
Identity = 260/269 (96.65%), Postives = 260/269 (96.65%), Query Frame = 0


Query: 1   MALSSPSLAGKAVKLTPSSPELLGNGRVSMRKSVSKSVSSGSPWYGPDRVKYLGPFSGEP 60
           MALSSPSLAGKAVKLTPSSPELLGNGRVSMRKSVSKSVSSGSPWYGPDRVKYLGPFSGEP
Sbjct: 6   MALSSPSLAGKAVKLTPSSPELLGNGRVSMRKSVSKSVSSGSPWYGPDRVKYLGPFSGEP 65

Query: 61  PSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCVFPELLSRNGVKF 120
           PSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCVFPELLSRNGVKF
Sbjct: 66  PSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCVFPELLSRNGVKF 125

Query: 121 GEAVWFKAGSQIFNEGGLDYLGNPSLIHAQSI---------LAIWASQVVLMGAVEGYRI 180
           GEAVWFKAGSQIFNEGGLDYLGNPSLIHAQSI         LAIWASQVVLMGAVEGYRI
Sbjct: 126 GEAVWFKAGSQIFNEGGLDYLGNPSLIHAQSIXSLIHAQSILAIWASQVVLMGAVEGYRI 185

Query: 181 AGGPLGEVTDPIYPGGSFDPLGLADDPEAFAELKVKELKNGRLAMFSMFGFFVQAIVTGK 240
           AGGPLGEVTDPIYPGGSFDPLGLADDPEAFAELKVKELKNGRLAMFSMFGFFVQAIVTGK
Sbjct: 186 AGGPLGEVTDPIYPGGSFDPLGLADDPEAFAELKVKELKNGRLAMFSMFGFFVQAIVTGK 245

Query: 241 GPLENLADHLADPVNNNAWAYATNFVPGK 260
           GPLENLADHLADPVNNNAWAYATNFVPGK
Sbjct: 246 GPLENLADHLADPVNNNAWAYATNFVPGK 274

[Close]

BLAST of MC03g_new0317 vs. NCBI nr
Match: XP_038877609.1 (chlorophyll a-b binding protein of LHCII type 1-like [Benincasa hispida])

HSP 1 Score: 523 bits (1347), Expect = 3.76e-187
Identity = 257/261 (98.47%), Postives = 259/261 (99.23%), Query Frame = 0


Query: 1   MALSSPSLAGKAVKLTPSSPELLGNG-RVSMRKSVSKSVSSGSPWYGPDRVKYLGPFSGE 60
           MALSSPSLAGKAVKLTPSSPELLGNG RVSMRKS SKS+SSGSPWYGPDRVKYLGPFSGE
Sbjct: 6   MALSSPSLAGKAVKLTPSSPELLGNGGRVSMRKSASKSISSGSPWYGPDRVKYLGPFSGE 65

Query: 61  PPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCVFPELLSRNGVK 120
           PPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCVFPELLSRNGVK
Sbjct: 66  PPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCVFPELLSRNGVK 125

Query: 121 FGEAVWFKAGSQIFNEGGLDYLGNPSLIHAQSILAIWASQVVLMGAVEGYRIAGGPLGEV 180
           FGEAVWFKAGSQIF+EGGLDYLGNPSLIHAQSILAIWASQVVLMGAVEGYRIAGGPLGEV
Sbjct: 126 FGEAVWFKAGSQIFSEGGLDYLGNPSLIHAQSILAIWASQVVLMGAVEGYRIAGGPLGEV 185

Query: 181 TDPIYPGGSFDPLGLADDPEAFAELKVKELKNGRLAMFSMFGFFVQAIVTGKGPLENLAD 240
           TDPIYPGGSFDPLGLADDPEAFAELKVKELKNGRLAMFSMFGFFVQAIVTGKGPLENLAD
Sbjct: 186 TDPIYPGGSFDPLGLADDPEAFAELKVKELKNGRLAMFSMFGFFVQAIVTGKGPLENLAD 245

Query: 241 HLADPVNNNAWAYATNFVPGK 260
           HLADPVNNNAWAYATNFVPGK
Sbjct: 246 HLADPVNNNAWAYATNFVPGK 266

[Close]

BLAST of MC03g_new0317 vs. NCBI nr
Match: XP_008444193.1 (PREDICTED: chlorophyll a-b binding protein of LHCII type 1-like [Cucumis melo] >KAA0053968.1 chlorophyll a-b binding protein of LHCII type 1-like [Cucumis melo var. makuwa] >TYK20653.1 chlorophyll a-b binding protein of LHCII type 1-like [Cucumis melo var. makuwa])

HSP 1 Score: 522 bits (1344), Expect = 1.04e-186
Identity = 254/260 (97.69%), Postives = 257/260 (98.85%), Query Frame = 0


Query: 1   MALSSPSLAGKAVKLTPSSPELLGNGRVSMRKSVSKSVSSGSPWYGPDRVKYLGPFSGEP 60
           MALSSPSLAGKAVKLTPSSPEL GN RV+MRKS +KSVSSGSPWYGPDRVKYLGPFSGEP
Sbjct: 6   MALSSPSLAGKAVKLTPSSPELFGNSRVNMRKSAAKSVSSGSPWYGPDRVKYLGPFSGEP 65

Query: 61  PSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCVFPELLSRNGVKF 120
           PSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCVFPELLSRNGVKF
Sbjct: 66  PSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCVFPELLSRNGVKF 125

Query: 121 GEAVWFKAGSQIFNEGGLDYLGNPSLIHAQSILAIWASQVVLMGAVEGYRIAGGPLGEVT 180
           GEAVWFKAGSQIF+EGGLDYLGNPSLIHAQSILAIWASQVVLMGAVEGYRIAGGPLGEVT
Sbjct: 126 GEAVWFKAGSQIFSEGGLDYLGNPSLIHAQSILAIWASQVVLMGAVEGYRIAGGPLGEVT 185

Query: 181 DPIYPGGSFDPLGLADDPEAFAELKVKELKNGRLAMFSMFGFFVQAIVTGKGPLENLADH 240
           DPIYPGGSFDPLGLADDPEAFAELKVKELKNGRLAMFSMFGFFVQAIVTGKGPLENLADH
Sbjct: 186 DPIYPGGSFDPLGLADDPEAFAELKVKELKNGRLAMFSMFGFFVQAIVTGKGPLENLADH 245

Query: 241 LADPVNNNAWAYATNFVPGK 260
           LADPVNNNAWAYATNFVPGK
Sbjct: 246 LADPVNNNAWAYATNFVPGK 265

[Close]

BLAST of MC03g_new0317 vs. NCBI nr
Match: XP_022139935.1 (chlorophyll a-b binding protein 3, chloroplastic-like [Momordica charantia])

HSP 1 Score: 527 bits (1358), Expect = 2.53e-186
Identity = 258/260 (99.23%), Postives = 258/260 (99.23%), Query Frame = 0


Query: 1   MALSSPSLAGKAVKLTPSSPELLGNGRVSMRKSVSKSVSSGSPWYGPDRVKYLGPFSGEP 60
           MALSSPSLAGKAVKLTPSSPELLGNGRVSMRK VSKSVSSGSPWYGPDRVKYLGPFSGEP
Sbjct: 31  MALSSPSLAGKAVKLTPSSPELLGNGRVSMRKFVSKSVSSGSPWYGPDRVKYLGPFSGEP 90

Query: 61  PSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCVFPELLSRNGVKF 120
           PSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCVFPELLSRNGVKF
Sbjct: 91  PSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCVFPELLSRNGVKF 150

Query: 121 GEAVWFKAGSQIFNEGGLDYLGNPSLIHAQSILAIWASQVVLMGAVEGYRIAGGPLGEVT 180
           GEAVWFKAGSQIFNEGGLDYLGNPSLIHAQSILAIWASQVVLMGAVEGYRIAGGPLGEVT
Sbjct: 151 GEAVWFKAGSQIFNEGGLDYLGNPSLIHAQSILAIWASQVVLMGAVEGYRIAGGPLGEVT 210

Query: 181 DPIYPGGSFDPLGLADDPEAFAELKVKELKNGRLAMFSMFGFFVQAIVTGKGPLENLADH 240
           DPIYPGGSFDPLGLADDPEAFAELKVKELKNGRLAMFSMFGFFVQAIVTGKGPLENLADH
Sbjct: 211 DPIYPGGSFDPLGLADDPEAFAELKVKELKNGRLAMFSMFGFFVQAIVTGKGPLENLADH 270

Query: 241 LADPVNNNAWAYATNFVPGK 260
           LADPVNNNAWAYATNFVPG 
Sbjct: 271 LADPVNNNAWAYATNFVPGN 290

[Close]

BLAST of MC03g_new0317 vs. ExPASy TrEMBL
Match: A0A6J1CKT5 (Chlorophyll a-b binding protein, chloroplastic OS=Momordica charantia OX=3673 GN=LOC111012353 PE=3 SV=1)

HSP 1 Score: 529 bits (1363), Expect = 6.38e-190
Identity = 259/260 (99.62%), Postives = 259/260 (99.62%), Query Frame = 0


Query: 1   MALSSPSLAGKAVKLTPSSPELLGNGRVSMRKSVSKSVSSGSPWYGPDRVKYLGPFSGEP 60
           MALSSPSLAGKAVKLTPSSPELLGNGRVSMRK VSKSVSSGSPWYGPDRVKYLGPFSGEP
Sbjct: 6   MALSSPSLAGKAVKLTPSSPELLGNGRVSMRKFVSKSVSSGSPWYGPDRVKYLGPFSGEP 65

Query: 61  PSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCVFPELLSRNGVKF 120
           PSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCVFPELLSRNGVKF
Sbjct: 66  PSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCVFPELLSRNGVKF 125

Query: 121 GEAVWFKAGSQIFNEGGLDYLGNPSLIHAQSILAIWASQVVLMGAVEGYRIAGGPLGEVT 180
           GEAVWFKAGSQIFNEGGLDYLGNPSLIHAQSILAIWASQVVLMGAVEGYRIAGGPLGEVT
Sbjct: 126 GEAVWFKAGSQIFNEGGLDYLGNPSLIHAQSILAIWASQVVLMGAVEGYRIAGGPLGEVT 185

Query: 181 DPIYPGGSFDPLGLADDPEAFAELKVKELKNGRLAMFSMFGFFVQAIVTGKGPLENLADH 240
           DPIYPGGSFDPLGLADDPEAFAELKVKELKNGRLAMFSMFGFFVQAIVTGKGPLENLADH
Sbjct: 186 DPIYPGGSFDPLGLADDPEAFAELKVKELKNGRLAMFSMFGFFVQAIVTGKGPLENLADH 245

Query: 241 LADPVNNNAWAYATNFVPGK 260
           LADPVNNNAWAYATNFVPGK
Sbjct: 246 LADPVNNNAWAYATNFVPGK 265

[Close]

BLAST of MC03g_new0317 vs. ExPASy TrEMBL
Match: A0A6J1CK60 (Chlorophyll a-b binding protein, chloroplastic OS=Momordica charantia OX=3673 GN=LOC111012357 PE=3 SV=1)

HSP 1 Score: 524 bits (1349), Expect = 1.21e-187
Identity = 260/269 (96.65%), Postives = 260/269 (96.65%), Query Frame = 0


Query: 1   MALSSPSLAGKAVKLTPSSPELLGNGRVSMRKSVSKSVSSGSPWYGPDRVKYLGPFSGEP 60
           MALSSPSLAGKAVKLTPSSPELLGNGRVSMRKSVSKSVSSGSPWYGPDRVKYLGPFSGEP
Sbjct: 6   MALSSPSLAGKAVKLTPSSPELLGNGRVSMRKSVSKSVSSGSPWYGPDRVKYLGPFSGEP 65

Query: 61  PSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCVFPELLSRNGVKF 120
           PSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCVFPELLSRNGVKF
Sbjct: 66  PSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCVFPELLSRNGVKF 125

Query: 121 GEAVWFKAGSQIFNEGGLDYLGNPSLIHAQSI---------LAIWASQVVLMGAVEGYRI 180
           GEAVWFKAGSQIFNEGGLDYLGNPSLIHAQSI         LAIWASQVVLMGAVEGYRI
Sbjct: 126 GEAVWFKAGSQIFNEGGLDYLGNPSLIHAQSIXSLIHAQSILAIWASQVVLMGAVEGYRI 185

Query: 181 AGGPLGEVTDPIYPGGSFDPLGLADDPEAFAELKVKELKNGRLAMFSMFGFFVQAIVTGK 240
           AGGPLGEVTDPIYPGGSFDPLGLADDPEAFAELKVKELKNGRLAMFSMFGFFVQAIVTGK
Sbjct: 186 AGGPLGEVTDPIYPGGSFDPLGLADDPEAFAELKVKELKNGRLAMFSMFGFFVQAIVTGK 245

Query: 241 GPLENLADHLADPVNNNAWAYATNFVPGK 260
           GPLENLADHLADPVNNNAWAYATNFVPGK
Sbjct: 246 GPLENLADHLADPVNNNAWAYATNFVPGK 274

[Close]

BLAST of MC03g_new0317 vs. ExPASy TrEMBL
Match: A0A5D3DAQ5 (Chlorophyll a-b binding protein, chloroplastic OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold480G00370 PE=3 SV=1)

HSP 1 Score: 522 bits (1344), Expect = 5.03e-187
Identity = 254/260 (97.69%), Postives = 257/260 (98.85%), Query Frame = 0


Query: 1   MALSSPSLAGKAVKLTPSSPELLGNGRVSMRKSVSKSVSSGSPWYGPDRVKYLGPFSGEP 60
           MALSSPSLAGKAVKLTPSSPEL GN RV+MRKS +KSVSSGSPWYGPDRVKYLGPFSGEP
Sbjct: 6   MALSSPSLAGKAVKLTPSSPELFGNSRVNMRKSAAKSVSSGSPWYGPDRVKYLGPFSGEP 65

Query: 61  PSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCVFPELLSRNGVKF 120
           PSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCVFPELLSRNGVKF
Sbjct: 66  PSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCVFPELLSRNGVKF 125

Query: 121 GEAVWFKAGSQIFNEGGLDYLGNPSLIHAQSILAIWASQVVLMGAVEGYRIAGGPLGEVT 180
           GEAVWFKAGSQIF+EGGLDYLGNPSLIHAQSILAIWASQVVLMGAVEGYRIAGGPLGEVT
Sbjct: 126 GEAVWFKAGSQIFSEGGLDYLGNPSLIHAQSILAIWASQVVLMGAVEGYRIAGGPLGEVT 185

Query: 181 DPIYPGGSFDPLGLADDPEAFAELKVKELKNGRLAMFSMFGFFVQAIVTGKGPLENLADH 240
           DPIYPGGSFDPLGLADDPEAFAELKVKELKNGRLAMFSMFGFFVQAIVTGKGPLENLADH
Sbjct: 186 DPIYPGGSFDPLGLADDPEAFAELKVKELKNGRLAMFSMFGFFVQAIVTGKGPLENLADH 245

Query: 241 LADPVNNNAWAYATNFVPGK 260
           LADPVNNNAWAYATNFVPGK
Sbjct: 246 LADPVNNNAWAYATNFVPGK 265

[Close]

BLAST of MC03g_new0317 vs. ExPASy TrEMBL
Match: A0A1S3BAK6 (Chlorophyll a-b binding protein, chloroplastic OS=Cucumis melo OX=3656 GN=LOC103487605 PE=3 SV=1)

HSP 1 Score: 522 bits (1344), Expect = 5.03e-187
Identity = 254/260 (97.69%), Postives = 257/260 (98.85%), Query Frame = 0


Query: 1   MALSSPSLAGKAVKLTPSSPELLGNGRVSMRKSVSKSVSSGSPWYGPDRVKYLGPFSGEP 60
           MALSSPSLAGKAVKLTPSSPEL GN RV+MRKS +KSVSSGSPWYGPDRVKYLGPFSGEP
Sbjct: 6   MALSSPSLAGKAVKLTPSSPELFGNSRVNMRKSAAKSVSSGSPWYGPDRVKYLGPFSGEP 65

Query: 61  PSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCVFPELLSRNGVKF 120
           PSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCVFPELLSRNGVKF
Sbjct: 66  PSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCVFPELLSRNGVKF 125

Query: 121 GEAVWFKAGSQIFNEGGLDYLGNPSLIHAQSILAIWASQVVLMGAVEGYRIAGGPLGEVT 180
           GEAVWFKAGSQIF+EGGLDYLGNPSLIHAQSILAIWASQVVLMGAVEGYRIAGGPLGEVT
Sbjct: 126 GEAVWFKAGSQIFSEGGLDYLGNPSLIHAQSILAIWASQVVLMGAVEGYRIAGGPLGEVT 185

Query: 181 DPIYPGGSFDPLGLADDPEAFAELKVKELKNGRLAMFSMFGFFVQAIVTGKGPLENLADH 240
           DPIYPGGSFDPLGLADDPEAFAELKVKELKNGRLAMFSMFGFFVQAIVTGKGPLENLADH
Sbjct: 186 DPIYPGGSFDPLGLADDPEAFAELKVKELKNGRLAMFSMFGFFVQAIVTGKGPLENLADH 245

Query: 241 LADPVNNNAWAYATNFVPGK 260
           LADPVNNNAWAYATNFVPGK
Sbjct: 246 LADPVNNNAWAYATNFVPGK 265

[Close]

BLAST of MC03g_new0317 vs. ExPASy TrEMBL
Match: A0A6J1CDN4 (Chlorophyll a-b binding protein, chloroplastic OS=Momordica charantia OX=3673 GN=LOC111010725 PE=3 SV=1)

HSP 1 Score: 527 bits (1358), Expect = 1.22e-186
Identity = 258/260 (99.23%), Postives = 258/260 (99.23%), Query Frame = 0


Query: 1   MALSSPSLAGKAVKLTPSSPELLGNGRVSMRKSVSKSVSSGSPWYGPDRVKYLGPFSGEP 60
           MALSSPSLAGKAVKLTPSSPELLGNGRVSMRK VSKSVSSGSPWYGPDRVKYLGPFSGEP
Sbjct: 31  MALSSPSLAGKAVKLTPSSPELLGNGRVSMRKFVSKSVSSGSPWYGPDRVKYLGPFSGEP 90

Query: 61  PSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCVFPELLSRNGVKF 120
           PSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCVFPELLSRNGVKF
Sbjct: 91  PSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCVFPELLSRNGVKF 150

Query: 121 GEAVWFKAGSQIFNEGGLDYLGNPSLIHAQSILAIWASQVVLMGAVEGYRIAGGPLGEVT 180
           GEAVWFKAGSQIFNEGGLDYLGNPSLIHAQSILAIWASQVVLMGAVEGYRIAGGPLGEVT
Sbjct: 151 GEAVWFKAGSQIFNEGGLDYLGNPSLIHAQSILAIWASQVVLMGAVEGYRIAGGPLGEVT 210

Query: 181 DPIYPGGSFDPLGLADDPEAFAELKVKELKNGRLAMFSMFGFFVQAIVTGKGPLENLADH 240
           DPIYPGGSFDPLGLADDPEAFAELKVKELKNGRLAMFSMFGFFVQAIVTGKGPLENLADH
Sbjct: 211 DPIYPGGSFDPLGLADDPEAFAELKVKELKNGRLAMFSMFGFFVQAIVTGKGPLENLADH 270

Query: 241 LADPVNNNAWAYATNFVPGK 260
           LADPVNNNAWAYATNFVPG 
Sbjct: 271 LADPVNNNAWAYATNFVPGN 290

[Close]

BLAST of MC03g_new0317 vs. TAIR 10
Match: AT2G34430.1 (light-harvesting chlorophyll-protein complex II subunit B1 )

HSP 1 Score: 477.6 bits (1228), Expect = 6.2e-135
Identity = 227/261 (86.97%), Postives = 246/261 (94.25%), Query Frame = 0


Query: 1   MALSSPSLAGKAVKLTPSSPELLGNGRVSMRKSVSKSVSSGSPWYGPDRVKYLGPFSGEP 60
           MALSSP+L GKAVKL+P++ E+ G GR++MRK+   +  SGSPWYG DRVKYLGPFSGEP
Sbjct: 6   MALSSPALTGKAVKLSPAASEVFGTGRITMRKASKPTGPSGSPWYGSDRVKYLGPFSGEP 65

Query: 61  PSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCVFPELLSRNGVKF 120
           PSYLTGEFPGDYGWDTAGLSADPETFA+NRELEVIHSRWAMLGALGCVFPELL+RNGVKF
Sbjct: 66  PSYLTGEFPGDYGWDTAGLSADPETFARNRELEVIHSRWAMLGALGCVFPELLARNGVKF 125

Query: 121 GEAVWFKAGSQIFNEGGLDYLGNPSLIHAQSILAIWASQVVLMGAVEGYRIAG-GPLGEV 180
           GEAVWFKAGSQIF++GGLDYLGNPSL+HAQSILAIWA+QV+LMGAVEGYR+AG GPLGE 
Sbjct: 126 GEAVWFKAGSQIFSDGGLDYLGNPSLVHAQSILAIWATQVILMGAVEGYRVAGDGPLGEA 185

Query: 181 TDPIYPGGSFDPLGLADDPEAFAELKVKELKNGRLAMFSMFGFFVQAIVTGKGPLENLAD 240
            D +YPGGSFDPLGLA DPEAFAELKVKELKNGRLAMFSMFGFFVQAIVTGKGPLENLAD
Sbjct: 186 EDLLYPGGSFDPLGLATDPEAFAELKVKELKNGRLAMFSMFGFFVQAIVTGKGPLENLAD 245

Query: 241 HLADPVNNNAWAYATNFVPGK 261
           HLADPVNNNAWA+ATNFVPGK
Sbjct: 246 HLADPVNNNAWAFATNFVPGK 266

[Close]

BLAST of MC03g_new0317 vs. TAIR 10
Match: AT1G29930.1 (chlorophyll A/B binding protein 1 )

HSP 1 Score: 476.5 bits (1225), Expect = 1.4e-134
Identity = 229/262 (87.40%), Postives = 249/262 (95.04%), Query Frame = 0


Query: 1   MALSSPSLAGKAVKLTPSSPELLGNGRVSMRKSVSKSVS-SGSPWYGPDRVKYLGPFSGE 60
           MALSSP+ AGKAVKL+P++ E+LG+GRV+MRK+V+K    SGSPWYG DRVKYLGPFSGE
Sbjct: 6   MALSSPAFAGKAVKLSPAASEVLGSGRVTMRKTVAKPKGPSGSPWYGSDRVKYLGPFSGE 65

Query: 61  PPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCVFPELLSRNGVK 120
            PSYLTGEFPGDYGWDTAGLSADPETFA+NRELEVIHSRWAMLGALGCVFPELL+RNGVK
Sbjct: 66  SPSYLTGEFPGDYGWDTAGLSADPETFARNRELEVIHSRWAMLGALGCVFPELLARNGVK 125

Query: 121 FGEAVWFKAGSQIFNEGGLDYLGNPSLIHAQSILAIWASQVVLMGAVEGYRIAG-GPLGE 180
           FGEAVWFKAGSQIF++GGLDYLGNPSL+HAQSILAIWA+QV+LMGAVEGYR+AG GPLGE
Sbjct: 126 FGEAVWFKAGSQIFSDGGLDYLGNPSLVHAQSILAIWATQVILMGAVEGYRVAGNGPLGE 185

Query: 181 VTDPIYPGGSFDPLGLADDPEAFAELKVKELKNGRLAMFSMFGFFVQAIVTGKGPLENLA 240
             D +YPGGSFDPLGLA DPEAFAELKVKELKNGRLAMFSMFGFFVQAIVTGKGP+ENLA
Sbjct: 186 AEDLLYPGGSFDPLGLATDPEAFAELKVKELKNGRLAMFSMFGFFVQAIVTGKGPIENLA 245

Query: 241 DHLADPVNNNAWAYATNFVPGK 261
           DHLADPVNNNAWA+ATNFVPGK
Sbjct: 246 DHLADPVNNNAWAFATNFVPGK 267

[Close]

BLAST of MC03g_new0317 vs. TAIR 10
Match: AT1G29910.1 (chlorophyll A/B binding protein 3 )

HSP 1 Score: 474.6 bits (1220), Expect = 5.3e-134
Identity = 228/262 (87.02%), Postives = 248/262 (94.66%), Query Frame = 0


Query: 1   MALSSPSLAGKAVKLTPSSPELLGNGRVSMRKSVSKSVS-SGSPWYGPDRVKYLGPFSGE 60
           MALSSP+ AGKAV L+P++ E+LG+GRV+MRK+V+K    SGSPWYG DRVKYLGPFSGE
Sbjct: 6   MALSSPAFAGKAVNLSPAASEVLGSGRVTMRKTVAKPKGPSGSPWYGSDRVKYLGPFSGE 65

Query: 61  PPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCVFPELLSRNGVK 120
            PSYLTGEFPGDYGWDTAGLSADPETFA+NRELEVIHSRWAMLGALGCVFPELL+RNGVK
Sbjct: 66  SPSYLTGEFPGDYGWDTAGLSADPETFARNRELEVIHSRWAMLGALGCVFPELLARNGVK 125

Query: 121 FGEAVWFKAGSQIFNEGGLDYLGNPSLIHAQSILAIWASQVVLMGAVEGYRIAG-GPLGE 180
           FGEAVWFKAGSQIF++GGLDYLGNPSL+HAQSILAIWA+QV+LMGAVEGYR+AG GPLGE
Sbjct: 126 FGEAVWFKAGSQIFSDGGLDYLGNPSLVHAQSILAIWATQVILMGAVEGYRVAGNGPLGE 185

Query: 181 VTDPIYPGGSFDPLGLADDPEAFAELKVKELKNGRLAMFSMFGFFVQAIVTGKGPLENLA 240
             D +YPGGSFDPLGLA DPEAFAELKVKELKNGRLAMFSMFGFFVQAIVTGKGP+ENLA
Sbjct: 186 AEDLLYPGGSFDPLGLATDPEAFAELKVKELKNGRLAMFSMFGFFVQAIVTGKGPIENLA 245

Query: 241 DHLADPVNNNAWAYATNFVPGK 261
           DHLADPVNNNAWA+ATNFVPGK
Sbjct: 246 DHLADPVNNNAWAFATNFVPGK 267

[Close]

BLAST of MC03g_new0317 vs. TAIR 10
Match: AT1G29920.1 (chlorophyll A/B-binding protein 2 )

HSP 1 Score: 474.6 bits (1220), Expect = 5.3e-134
Identity = 228/262 (87.02%), Postives = 248/262 (94.66%), Query Frame = 0


Query: 1   MALSSPSLAGKAVKLTPSSPELLGNGRVSMRKSVSKSVS-SGSPWYGPDRVKYLGPFSGE 60
           MALSSP+ AGKAV L+P++ E+LG+GRV+MRK+V+K    SGSPWYG DRVKYLGPFSGE
Sbjct: 6   MALSSPAFAGKAVNLSPAASEVLGSGRVTMRKTVAKPKGPSGSPWYGSDRVKYLGPFSGE 65

Query: 61  PPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCVFPELLSRNGVK 120
            PSYLTGEFPGDYGWDTAGLSADPETFA+NRELEVIHSRWAMLGALGCVFPELL+RNGVK
Sbjct: 66  SPSYLTGEFPGDYGWDTAGLSADPETFARNRELEVIHSRWAMLGALGCVFPELLARNGVK 125

Query: 121 FGEAVWFKAGSQIFNEGGLDYLGNPSLIHAQSILAIWASQVVLMGAVEGYRIAG-GPLGE 180
           FGEAVWFKAGSQIF++GGLDYLGNPSL+HAQSILAIWA+QV+LMGAVEGYR+AG GPLGE
Sbjct: 126 FGEAVWFKAGSQIFSDGGLDYLGNPSLVHAQSILAIWATQVILMGAVEGYRVAGNGPLGE 185

Query: 181 VTDPIYPGGSFDPLGLADDPEAFAELKVKELKNGRLAMFSMFGFFVQAIVTGKGPLENLA 240
             D +YPGGSFDPLGLA DPEAFAELKVKELKNGRLAMFSMFGFFVQAIVTGKGP+ENLA
Sbjct: 186 AEDLLYPGGSFDPLGLATDPEAFAELKVKELKNGRLAMFSMFGFFVQAIVTGKGPIENLA 245

Query: 241 DHLADPVNNNAWAYATNFVPGK 261
           DHLADPVNNNAWA+ATNFVPGK
Sbjct: 246 DHLADPVNNNAWAFATNFVPGK 267

[Close]

BLAST of MC03g_new0317 vs. TAIR 10
Match: AT2G34420.1 (photosystem II light harvesting complex gene B1B2 )

HSP 1 Score: 472.2 bits (1214), Expect = 2.6e-133
Identity = 229/262 (87.40%), Postives = 248/262 (94.66%), Query Frame = 0


Query: 1   MALSSPSLAGKAVKLTPSSPELLGNGRVSMRKSVSKSVS-SGSPWYGPDRVKYLGPFSGE 60
           MALSSP+ AGKAVK  P++ ++LG+GRV+MRK+V+K    SGSPWYG DRVKYLGPFSGE
Sbjct: 6   MALSSPAFAGKAVK--PAASDVLGSGRVTMRKTVAKPKGPSGSPWYGSDRVKYLGPFSGE 65

Query: 61  PPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCVFPELLSRNGVK 120
           PPSYLTGEFPGDYGWDTAGLSADPETFA+NRELEVIHSRWAMLGALGCVFPELL+RNGVK
Sbjct: 66  PPSYLTGEFPGDYGWDTAGLSADPETFARNRELEVIHSRWAMLGALGCVFPELLARNGVK 125

Query: 121 FGEAVWFKAGSQIFNEGGLDYLGNPSLIHAQSILAIWASQVVLMGAVEGYRIAG-GPLGE 180
           FGEAVWFKAGSQIF++GGLDYLGNPSL+HAQSILAIWA+QV+LMGAVEGYR+AG GPLGE
Sbjct: 126 FGEAVWFKAGSQIFSDGGLDYLGNPSLVHAQSILAIWATQVILMGAVEGYRVAGDGPLGE 185

Query: 181 VTDPIYPGGSFDPLGLADDPEAFAELKVKELKNGRLAMFSMFGFFVQAIVTGKGPLENLA 240
             D +YPGGSFDPLGLA DPEAFAELKVKELKNGRLAMFSMFGFFVQAIVTGKGPLENLA
Sbjct: 186 AEDLLYPGGSFDPLGLATDPEAFAELKVKELKNGRLAMFSMFGFFVQAIVTGKGPLENLA 245

Query: 241 DHLADPVNNNAWAYATNFVPGK 261
           DHLADPVNNNAWA+ATNFVPGK
Sbjct: 246 DHLADPVNNNAWAFATNFVPGK 265

The following BLAST results are available for this feature:

BLAST of MC03g_new0317 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
P09756	3.5e-143	95.00	Chlorophyll a-b binding protein 3, chloroplastic OS=Glycine max OX=3847 GN=CAB3 ...	[more]
P08221	6.7e-142	93.73	Chlorophyll a-b binding protein of LHCII type I, chloroplastic (Fragment) OS=Cuc...	[more]
P27493	2.5e-141	91.15	Chlorophyll a-b binding protein 21, chloroplastic OS=Nicotiana tabacum OX=4097 G...	[more]
P27495	2.8e-140	91.22	Chlorophyll a-b binding protein 40, chloroplastic OS=Nicotiana tabacum OX=4097 G...	[more]
P07370	1.8e-139	90.38	Chlorophyll a-b binding protein 1B, chloroplastic OS=Solanum lycopersicum OX=408...	[more]

BLAST of MC03g_new0317 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022142169.1	1.32e-189	99.62	chlorophyll a-b binding protein of LHCII type 1-like [Momordica charantia]	[more]
XP_022142175.1	2.50e-187	96.65	chlorophyll a-b binding protein of LHCII type 1-like [Momordica charantia]	[more]
XP_038877609.1	3.76e-187	98.47	chlorophyll a-b binding protein of LHCII type 1-like [Benincasa hispida]	[more]
XP_008444193.1	1.04e-186	97.69	PREDICTED: chlorophyll a-b binding protein of LHCII type 1-like [Cucumis melo] >...	[more]
XP_022139935.1	2.53e-186	99.23	chlorophyll a-b binding protein 3, chloroplastic-like [Momordica charantia]	[more]

BLAST of MC03g_new0317 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1CKT5	6.38e-190	99.62	Chlorophyll a-b binding protein, chloroplastic OS=Momordica charantia OX=3673 GN...	[more]
A0A6J1CK60	1.21e-187	96.65	Chlorophyll a-b binding protein, chloroplastic OS=Momordica charantia OX=3673 GN...	[more]
A0A5D3DAQ5	5.03e-187	97.69	Chlorophyll a-b binding protein, chloroplastic OS=Cucumis melo var. makuwa OX=11...	[more]
A0A1S3BAK6	5.03e-187	97.69	Chlorophyll a-b binding protein, chloroplastic OS=Cucumis melo OX=3656 GN=LOC103...	[more]
A0A6J1CDN4	1.22e-186	99.23	Chlorophyll a-b binding protein, chloroplastic OS=Momordica charantia OX=3673 GN...	[more]

BLAST of MC03g_new0317 vs. TAIR 10


Match Name	E-value	Identity	Description
AT2G34430.1	6.2e-135	86.97	light-harvesting chlorophyll-protein complex II subunit B1	[more]
AT1G29930.1	1.4e-134	87.40	chlorophyll A/B binding protein 1	[more]
AT1G29910.1	5.3e-134	87.02	chlorophyll A/B binding protein 3	[more]
AT1G29920.1	5.3e-134	87.02	chlorophyll A/B-binding protein 2	[more]
AT2G34420.1	2.6e-133	87.40	photosystem II light harvesting complex gene B1B2	[more]

InterPro

Analysis Name: InterPro Annotations of Bitter gourd (Dali-11) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR023329	Chlorophyll a/b binding domain superfamily	GENE3D	1.10.3460.10	Chlorophyll a/b binding protein domain	coord: 51..253 e-value: 1.0E-90 score: 305.0
IPR022796	Chlorophyll A-B binding protein	PFAM	PF00504	Chloroa_b-bind	coord: 60..226 e-value: 2.0E-49 score: 168.2
None	No IPR available	PANTHER	PTHR21649:SF88	CHLOROPHYLL A-B BINDING PROTEIN 3, CHLOROPLASTIC	coord: 1..260
None	No IPR available	SUPERFAMILY	103511	Chlorophyll a-b binding protein	coord: 43..257
IPR001344	Chlorophyll A-B binding protein, plant and chromista	PANTHER	PTHR21649	CHLOROPHYLL A/B BINDING PROTEIN	coord: 1..260

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
MC03g_new0317.1	MC03g_new0317.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0009768	photosynthesis, light harvesting in photosystem I
biological_process	GO:0018298	protein-chromophore linkage
biological_process	GO:0009416	response to light stimulus
biological_process	GO:0009765	photosynthesis, light harvesting
cellular_component	GO:0009535	chloroplast thylakoid membrane
cellular_component	GO:0009522	photosystem I
cellular_component	GO:0009523	photosystem II
cellular_component	GO:0016020	membrane
molecular_function	GO:0016168	chlorophyll binding
molecular_function	GO:0046872	metal ion binding