MC03g_new0315 (gene) Bitter gourd (Dali-11) v1

Overview


Name	MC03g_new0315
Type	gene
Organism	Momordica charantia cv. Dali-11 (Bitter gourd (Dali-11) v1)
Description	Unknown protein
Location	MC03: 13580563 .. 13583620 (-)
RNA-Seq Expression	MC03g_new0315
Synteny	MC03g_new0315

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

GTGAGCACAAGCCATAATTAATTAGATTTAAGTATTTTTTAAAAAATTTAATTCTTAAAATTACATTTTTTTAGTACTTCTTAAAATTACATATAATTACATAATTTCCCTACAAATTCTCATGGAGGATCATAACGTAATCCTCTTCCTCGCCCACATCCCCAATTTTTGTAGTAGAAATTTTAGCGGGAAAATAATTGATCAATCTCCCATAAACATTTTACTAGGGTTTTCTTCGCAGAGTTGGGGCTTTTGATTTCAAGCTTGCATCGTCATCTCACCCATCACTGTTCCTGCCCGATTCTTCTTTCCTCGATGGGAATGGAATCATGGGACACACTCTTCGTTATCTCATCTCTTCCTTGGATTTCGAAGCTTCATTCTATTTCGGTGCAAACACATAAAAGAGCTAATGGTAACGTATTTCTTGAAACATATTTTCGATTTCGTTTTGAATTATCTACATTTAATTGTTCGAATGCTTCCAATACTTTTAGTTTGTTTGAGTTGGAAGATTTAATTAGGGCAATGCGCTTGCTGATGGTGTTGGAGAAAAATATGGAATTCATAGGTCAACATTAGGCCATTTTAGGATAGCCAATGCACTTGGTTTGTTCGTTGATCCGAAATTCAAGTGAATGGTTCTAGTAAATGTTTTACATATTTGTATCTTGCCCCCATTTCCAAATATTTGCAAATCCCAAACCACTGTTGGGAGAAAGCGGAATTCTATATTACTGTCTATTGGTACCAGTAAACACCAAGCCTTTAGAATCCGAGCATTCTTGTAGAAATTTATGTTGTATTTCACTTTTTGATACTGATTTTTCAGGCGCCTGGGCTTTTCTCCAATGGATCTGGCCTCTTCTCCCAGAACTTCAAATGCAAAGCCCTCTTCTCAAGCATCTGCTCAATCTCCTCAATTGGAAGGCCCTTTGTTTCTGGTACGCATATCAGGACAAACAAAAGGGCTACTACTGAAATCAAACCGAATATTAGGAATGTCCAGGAAGTCCCAATCGATTGGGTTAAGGATAAGAAAGATTGAGCAACAATAAGGTTTGAGATCCAATTTGCAGTGGCTGCTATTCCTCCACCGACTCCACGGTATCTTAAAGGGTAAATCTCAGAGTTCACAATCCATGGCACAGTTCCCATTCCTGGAGAGAAGAAAATAATGTAGAGAGCAAGACCGATGAGAGCAAGCCACCCAAATTTGCTAGGACATCCCCTTGTATACCATAGTCTATCTTCTTTATGGCATAAATCCTTCACTGTGTCATTTGCAACCAAACATTCCCCGGGAAATAACTAGAAACAACAAAAAGGTGTCATATTAACATGTGAAACATAAAGAAGGAAATGTTATGCTGCTATTGTATCTCTATGAGATTGGTGCTTGGTTTTACCTTATTAGCTGCTGAAGCACAGAAACCACAATCTGGAGATGAGGCTTTTAAACACCTCATACAGTCCCAAGAAGCAGTATTGCTAGCCAAACTGTAGTCTGGGCACGTGTAGGCGTTCAGTTGAGTGGTTTTAGTAGCACTCACTAGTGGAGAGTGAGACGTTGTTTCGTGAAAAACTGCTGATAGAAGCCCGAGAGAGATTATGACACCAAATAAGCTGATGACTAGAAGCTTTTTTCTCCCTGTTCTATCGATGAAATATATGCTCACAATGGAGCCAAATGCGTTGAGTCCAGCAGTGACTAGCGAAAGCAGTAGTGCAGTCTCATTGGATGCAAAGCCAGCCAATTGAACTATAGTAGGGCTATAGTACATAACTGTATTTATGCCCACGAATTGTTGGAAAATCTGGAGCCCAACCCCTGCATAAAGTCCCCTTCTCACCGTTTTGGTTTTCAACAGCTTAATCAAGCTAATTTTCTCAGAAGACTCTTTCTCCTTGATCTCTGCTTCAACGGATTCCTTAAGATCTCGAATCTCTGCTGCTACCTCATCTGCTGAATATATTTTTCTTAGTATCCTTTCAGCCTCTTCTGACCTTCCCTGTTGAACCAGAAAATTGTTACGGTTAAAGCTTCAAGCTATCATACTTATGAAGACCAAATACTTGAGGCGAAGCCACAGTATCACCTTGCGGTATAACCATCGAGGTGACTCCGGAAGCAATAACATTAAGATGAACTGCACGATAGCTGGAACACACGCAACCCCAAGCATCCATCGCCAAGTCCCTGGTGCCTACATGAATACCCTCTATGCTTTAGTTTTTAATTTCATTTTATATTAAAGAAAAACTAATATCTTATAAGTTCAACCATCACTCTTGGACAAGGAAATGGTTCATCTTATGCATATTACAATCCAATCTAACTGAAAGGTAGCTTCTCTTAACTTGTGGGCTGGCTTTGATCATCAGAGGAATATGAATAATAGTGCAGAGATTAACGTTTAGTAGCTGAAAGTATCTGGACCTACTGTACAATGATATTTTACATGATTTACCTTGGTAAAAGCCAGGTTGATGAGGTAGGCCAGAAACTGGCCACCAGTGATGAGAAATCCATTTGTGCTCACAAGAGCACCGCGGATTTTTGCAGGGGAAGCCTCAGAGATGTACAAGGGGGAGGTCATGGAAGCCATTCCCACACCAAGTCCAACAAAAACTCGACCGACGATGAGAAGGGCAGGGCCAGGTGCAGCTGCCATGACCACAGCTCCAATGAAGAAGAGGAAATCTGCTATGAGGATTGCACTTCGCCTCCCGTATCGGTCGTTCATCCATCCTCCAATTGCTGCTCCTATTATGGCCCCTGCAATTGCCATGCTCACTATAGTTTCCTGTTTGATGTTTATACCATCAACAACTTGGTGTTCAGTTGCATTGCTAAACTGGAATTCTAACTTGTGAGTTGAGGTTTTGAACTTTCAGTGAGGTTGGTTTTTCCAGGATTTAGAAGCAGAGATCTCTGCTATTTTGGGTTGAAGAAGAATTGGTGTAGATGGATTTAAATCCATGATAAATGAAGCCATCAGTTTACGACCATTTGATAGTATTTTGTCTCTAGAAACAAACTCATTTACAATGTCTT

mRNA sequence

ATGACACCAAATAAGCTGATGACTAGAAGCTTTTTTCTCCCTGTTCTATCGATGAAATATATGCTCACAATGGAGCCAAATGCGTTGAGTCCAGCAGTGACTAGCGAAAGCAGTAGTGCAGTCTCATTGGATGCAAAGCCAGCCAATTGA

Coding sequence (CDS)

ATGACACCAAATAAGCTGATGACTAGAAGCTTTTTTCTCCCTGTTCTATCGATGAAATATATGCTCACAATGGAGCCAAATGCGTTGAGTCCAGCAGTGACTAGCGAAAGCAGTAGTGCAGTCTCATTGGATGCAAAGCCAGCCAATTGA

Protein sequence

MTPNKLMTRSFFLPVLSMKYMLTMEPNALSPAVTSESSSAVSLDAKPAN

Homology

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BLAST of MC03g_new0315 vs. ExPASy TrEMBL
Match: A0A2P2ITQ9 (Uncharacterized protein OS=Rhizophora mucronata OX=61149 PE=4 SV=1)

HSP 1 Score: 43.9 bits (102), Expect = 1.27e-04
Identity = 24/28 (85.71%), Postives = 24/28 (85.71%), Query Frame = 0


Query: 21 MLTMEPNALSPAVTSESSSAVSLDAKPA 48
          ML MEP ALSPAVTSES SAV LDAKPA
Sbjct: 1  MLAMEPEALSPAVTSESKSAVCLDAKPA 28

The following BLAST results are available for this feature:

BLAST of MC03g_new0315 vs.


Match Name	E-value	Identity	Description

BLAST of MC03g_new0315 vs.


Match Name	E-value	Identity	Description

BLAST of MC03g_new0315 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A2P2ITQ9	1.27e-04	85.71	Uncharacterized protein OS=Rhizophora mucronata OX=61149 PE=4 SV=1	[more]

BLAST of MC03g_new0315 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description

InterPro

Analysis Name: InterPro Annotations of Bitter gourd (Dali-11) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 30..49

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
MC03g_new0315.1	MC03g_new0315.1	mRNA