MC03g_new0268 (gene) Bitter gourd (Dali-11) v1

Overview


Name	MC03g_new0268
Type	gene
Organism	Momordica charantia cv. Dali-11 (Bitter gourd (Dali-11) v1)
Description	Unknown protein
Location	MC03: 11920390 .. 11921836 (-)
RNA-Seq Expression	MC03g_new0268
Synteny	MC03g_new0268

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATTCTTCTCTCTCTAGTTCTATTGGTTTGCCCATTCACTCTACTCTATAAATAGTTCTCACATTCATTTGTTTCCTCATCTCACTCACAAGCAGCCCTCTCTCTCTCAATTCTCTCCCTATTCTTTATTTTCCCCATTCATTATTTCTTCTTCTTCTCCAATGGCCAGTGTTGAGGTAACCCATTCTCTCTCCTCTCTCTCTTCAGAGATATCTAAGAGAAGCTTGATCACTCCCTTTTTTGATCAACCAGACATTTCAATTTGTTCTCATTTAACTCTTAATTTACTCAACTTTAGCCACCAATTCTCAAGTATGGCGCATTTATATGCTCGTAGATCTAGTTGATCTAACGAGATCGATGAACTTTTGTAATTAGTGGCGGATTCATAAATTTTTATTCGAACACCGTTTACAACTTTATTTTTTGTTACCTATGATCTTCGATTTTAAAAAATTTAATGGGTAAGCTAGAAAAAAGACTAAAATATTTAACTCTTTGATCTGGGGTAATTTGTTCCTCTTTTTCCTTTCTTCGCTCCGCTCCTGTTATATGTTCGTCATGGCACATGCAGTGAAAGGATCTTCTGTTTTTTTTCTCTTGGTGTATTTTCGCTTGTTCTTAAATATTACATGAATTGGGTTTTGCAGGTTGAATCATCGGTTGCGAACTTGCCGGAGAACGTGGAGGCGCCGGAGGCGAAGGTCGAAGAAAAATCTCCCGAAGTCCAGCCAGCGAGCGAAGAATCTCCGGTGGCTGAGCCAGCTGACGTAGAAGAACCAAAGCCTGAAGCCACGGAGGCAGATCAGGTAAATAAGGGCGGAGCGAAGAAGGAAGGAGATTCCTTATCCTCTTAATTTGTGACAAATTTTAAAACAACAACCTCATTATATCTATGAAAAGTTAAAAAGGTAAAATTTTGTCTGCAGGCCGTACAATCGGCTAAAGCTCCGGAGGAGGCCGTGGAAGCGGCAGAGGAGCCGAGAGTTGAGGAAGAAGAAAAGAAGGAAGAAGCAGCGGAAGCTGAATCAGTGGACAAAGAAGCCGTGCCTGCAGCAGAAGAGCCAAAGGCCGAGGAGTCTCAAACCGCCGAGCCCGCTGCCGAACCGGCCGCAGCCGCAGTGGAGGATGAGAAACCAGTTGAAAAAGAGAAAGCAGCTGAGGTAGCAGAAGAGAAGAGCCAAGAATAGAGAGATGGAAGCCATGTGAAGGGAAGAACTGAAGAAGGGGAGAGAGTATTTAAGTAGTTATTAATTTATGTGATGTTTTTTCTTTCTTTGATTTTCTATTGGTTTATTGAGGTTTTTGAGTGGGGAATTTATATATCTGAATTATTAAGAAATTAAGTTGAAGGATGTGTTATGGAGTTGAAGGATTTGGCTGCTATATGGGTTTGAAGATAATATATTATCTCTCAACTTCTAAGAGTTATTAAATTTGATAATTAA

mRNA sequence

ATGGCCAGTGTTGAGGTTGAATCATCGGTTGCGAACTTGCCGGAGAACGTGGAGGCGCCGGAGGCGAAGGTCGAAGAAAAATCTCCCGAAGTCCAGCCAGCGAGCGAAGAATCTCCGGTGGCTGAGCCAGCTGACGTAGAAGAACCAAAGCCTGAAGCCACGGAGGCAGATCAGGCCGTACAATCGGCTAAAGCTCCGGAGGAGGCCGTGGAAGCGGCAGAGGAGCCGAGAGTTGAGGAAGAAGAAAAGAAGGAAGAAGCAGCGGAAGCTGAATCAGTGGACAAAGAAGCCGTGCCTGCAGCAGAAGAGCCAAAGGCCGAGGAGTCTCAAACCGCCGAGCCCGCTGCCGAACCGGCCGCAGCCGCAGTGGAGGATGAGAAACCAGTTGAAAAAGAGAAAGCAGCTGAGGTAGCAGAAGAGAAGAGCCAAGAATAG

Coding sequence (CDS)

ATGGCCAGTGTTGAGGTTGAATCATCGGTTGCGAACTTGCCGGAGAACGTGGAGGCGCCGGAGGCGAAGGTCGAAGAAAAATCTCCCGAAGTCCAGCCAGCGAGCGAAGAATCTCCGGTGGCTGAGCCAGCTGACGTAGAAGAACCAAAGCCTGAAGCCACGGAGGCAGATCAGGCCGTACAATCGGCTAAAGCTCCGGAGGAGGCCGTGGAAGCGGCAGAGGAGCCGAGAGTTGAGGAAGAAGAAAAGAAGGAAGAAGCAGCGGAAGCTGAATCAGTGGACAAAGAAGCCGTGCCTGCAGCAGAAGAGCCAAAGGCCGAGGAGTCTCAAACCGCCGAGCCCGCTGCCGAACCGGCCGCAGCCGCAGTGGAGGATGAGAAACCAGTTGAAAAAGAGAAAGCAGCTGAGGTAGCAGAAGAGAAGAGCCAAGAATAG

Protein sequence

MASVEVESSVANLPENVEAPEAKVEEKSPEVQPASEESPVAEPADVEEPKPEATEADQAVQSAKAPEEAVEAAEEPRVEEEEKKEEAAEAESVDKEAVPAAEEPKAEESQTAEPAAEPAAAAVEDEKPVEKEKAAEVAEEKSQE

Homology

[Close]

BLAST of MC03g_new0268 vs. NCBI nr
Match: XP_022142401.1 (uncharacterized protein LOC111012542 [Momordica charantia])

HSP 1 Score: 222 bits (566), Expect = 5.18e-72
Identity = 144/144 (100.00%), Postives = 144/144 (100.00%), Query Frame = 0


Query: 1   MASVEVESSVANLPENVEAPEAKVEEKSPEVQPASEESPVAEPADVEEPKPEATEADQAV 60
           MASVEVESSVANLPENVEAPEAKVEEKSPEVQPASEESPVAEPADVEEPKPEATEADQAV
Sbjct: 1   MASVEVESSVANLPENVEAPEAKVEEKSPEVQPASEESPVAEPADVEEPKPEATEADQAV 60

Query: 61  QSAKAPEEAVEAAEEPRVEEEEKKEEAAEAESVDKEAVPAAEEPKAEESQTAEPAAEPAA 120
           QSAKAPEEAVEAAEEPRVEEEEKKEEAAEAESVDKEAVPAAEEPKAEESQTAEPAAEPAA
Sbjct: 61  QSAKAPEEAVEAAEEPRVEEEEKKEEAAEAESVDKEAVPAAEEPKAEESQTAEPAAEPAA 120

Query: 121 AAVEDEKPVEKEKAAEVAEEKSQE 144
           AAVEDEKPVEKEKAAEVAEEKSQE
Sbjct: 121 AAVEDEKPVEKEKAAEVAEEKSQE 144

[Close]

BLAST of MC03g_new0268 vs. NCBI nr
Match: XP_038895685.1 (cytochrome c1-like [Benincasa hispida])

HSP 1 Score: 100 bits (250), Expect = 5.11e-24
Identity = 91/145 (62.76%), Postives = 104/145 (71.72%), Query Frame = 0


Query: 3   SVEVESSVANLPENVEAPEA-KVEEKSPEVQPASEESPVAEPADVEEPKPEATEADQAVQ 62
           + EVES+ A LPE VE+PE  K EEK+PE QPA+E  P AE A+VE+PKPE  E+DQA Q
Sbjct: 2   ATEVESA-ATLPETVESPEVVKAEEKTPEEQPATEAKPEAESANVEKPKPEVQESDQAEQ 61

Query: 63  SAKAPEEAVEAAEEPRVEEEEKKEEAA-EAESVDKEA-VPAAEEPKAEESQTAEPAAEPA 122
           +A+AP E     EEP+VEEEEKKEEA    ESV KE  VP AEEPKAEE   AE  AE A
Sbjct: 62  TAEAPAEPENPTEEPKVEEEEKKEEAVVPTESVAKEEEVPEAEEPKAEEPPAAEAEAE-A 121

Query: 123 AAAVEDEKPVEKEKAAEVAEEKSQE 144
             A E+EK VE+EK AEVAEEK QE
Sbjct: 122 EPAAEEEKQVEEEKPAEVAEEKGQE 144

[Close]

BLAST of MC03g_new0268 vs. NCBI nr
Match: KAA0054325.1 (putative serine/threonine-protein kinase kinX [Cucumis melo var. makuwa] >TYK12361.1 putative serine/threonine-protein kinase kinX [Cucumis melo var. makuwa])

HSP 1 Score: 76.6 bits (187), Expect = 2.01e-14
Identity = 83/146 (56.85%), Postives = 96/146 (65.75%), Query Frame = 0


Query: 3   SVEVESSVANLPENVEAPEAKVEEKSPEVQPASEESPVAEPADVEEPKPEATEADQAVQS 62
           S+EVE + A LPE VE    KVEEKSPE QP  E  P  EP ++EEPKPEA E DQ  +S
Sbjct: 19  SLEVEPA-APLPETVEV--VKVEEKSPEEQPVIEADPEVEPTNLEEPKPEAPEPDQTDES 78

Query: 63  AKAPEEAVEAAEEPRVEEE-EKKEEAA-EAESVDKE-AVPAAEEP-KAEESQTAEPAAEP 122
            +AP E+    EE +VEE+ EKKEE     E+V+KE AV   EEP KAEE   AE  AEP
Sbjct: 79  TEAPVESANPVEESKVEEDQEKKEETVVTTETVEKEEAVAEDEEPAKAEERPAAEVEAEP 138

Query: 123 AAAAVEDEKPVEKEKAAEVAEEKSQE 144
               VE+EK VE+EK  EVAEEKSQE
Sbjct: 139 P---VEEEKVVEEEKPVEVAEEKSQE 158

[Close]

BLAST of MC03g_new0268 vs. NCBI nr
Match: XP_008458953.1 (PREDICTED: probable serine/threonine-protein kinase kinX [Cucumis melo])

HSP 1 Score: 75.1 bits (183), Expect = 5.35e-14
Identity = 82/146 (56.16%), Postives = 95/146 (65.07%), Query Frame = 0


Query: 3   SVEVESSVANLPENVEAPEAKVEEKSPEVQPASEESPVAEPADVEEPKPEATEADQAVQS 62
           + EVE + A LPE VE    KVEEKSPE QP  E  P  EP ++EEPKPEA E DQ  +S
Sbjct: 2   ATEVEPA-APLPETVEV--VKVEEKSPEEQPVIEADPEVEPTNLEEPKPEAPEPDQTDES 61

Query: 63  AKAPEEAVEAAEEPRVEEE-EKKEEAA-EAESVDKE-AVPAAEEP-KAEESQTAEPAAEP 122
            +AP E+    EE +VEE+ EKKEE     E+V+KE AV   EEP KAEE   AE  AEP
Sbjct: 62  TEAPVESANPVEESKVEEDQEKKEETVVTTETVEKEEAVAEDEEPAKAEERPAAEVEAEP 121

Query: 123 AAAAVEDEKPVEKEKAAEVAEEKSQE 144
               VE+EK VE+EK  EVAEEKSQE
Sbjct: 122 P---VEEEKVVEEEKPVEVAEEKSQE 141

[Close]

BLAST of MC03g_new0268 vs. NCBI nr
Match: XP_004139547.1 (uncharacterized protein LOC101220582 [Cucumis sativus] >KGN65063.1 hypothetical protein Csa_013003 [Cucumis sativus])

HSP 1 Score: 71.6 bits (174), Expect = 1.07e-12
Identity = 82/146 (56.16%), Postives = 96/146 (65.75%), Query Frame = 0


Query: 3   SVEVESSVANLPENVEAPEAKVEEKSPEVQPASEESPVAEPADVEEPKPEATEADQAVQS 62
           + EVES+ A+LPE VE    KVE+KS E QP  E  P  EPA++EEPKPEA E DQ  +S
Sbjct: 2   ATEVESA-ASLPETVEV--VKVEKKSSEEQPVIEADPEVEPANLEEPKPEALEPDQVEES 61

Query: 63  AKAPEEAVEAAEEPRVEE-EEKKEEAAEA-ESVDKE-AVPAAEEP-KAEESQTAEPAAEP 122
            +AP       EE +VEE +EKKEE   A ES +KE AVP AEE  K EES  AE  AE 
Sbjct: 62  TEAP------VEESKVEEGQEKKEETVVATESEEKEEAVPEAEESAKVEESPAAEVEAE- 121

Query: 123 AAAAVEDEKPVEKEKAAEVAEEKSQE 144
           A   VE+EK +E+EK  EVAEEKSQE
Sbjct: 122 AKPQVEEEKAIEEEKPTEVAEEKSQE 137

[Close]

BLAST of MC03g_new0268 vs. ExPASy TrEMBL
Match: A0A6J1CM25 (uncharacterized protein LOC111012542 OS=Momordica charantia OX=3673 GN=LOC111012542 PE=4 SV=1)

HSP 1 Score: 222 bits (566), Expect = 2.51e-72
Identity = 144/144 (100.00%), Postives = 144/144 (100.00%), Query Frame = 0


Query: 1   MASVEVESSVANLPENVEAPEAKVEEKSPEVQPASEESPVAEPADVEEPKPEATEADQAV 60
           MASVEVESSVANLPENVEAPEAKVEEKSPEVQPASEESPVAEPADVEEPKPEATEADQAV
Sbjct: 1   MASVEVESSVANLPENVEAPEAKVEEKSPEVQPASEESPVAEPADVEEPKPEATEADQAV 60

Query: 61  QSAKAPEEAVEAAEEPRVEEEEKKEEAAEAESVDKEAVPAAEEPKAEESQTAEPAAEPAA 120
           QSAKAPEEAVEAAEEPRVEEEEKKEEAAEAESVDKEAVPAAEEPKAEESQTAEPAAEPAA
Sbjct: 61  QSAKAPEEAVEAAEEPRVEEEEKKEEAAEAESVDKEAVPAAEEPKAEESQTAEPAAEPAA 120

Query: 121 AAVEDEKPVEKEKAAEVAEEKSQE 144
           AAVEDEKPVEKEKAAEVAEEKSQE
Sbjct: 121 AAVEDEKPVEKEKAAEVAEEKSQE 144

[Close]

BLAST of MC03g_new0268 vs. ExPASy TrEMBL
Match: A0A5D3CKL4 (Putative serine/threonine-protein kinase kinX OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold302G001390 PE=4 SV=1)

HSP 1 Score: 76.6 bits (187), Expect = 9.74e-15
Identity = 83/146 (56.85%), Postives = 96/146 (65.75%), Query Frame = 0


Query: 3   SVEVESSVANLPENVEAPEAKVEEKSPEVQPASEESPVAEPADVEEPKPEATEADQAVQS 62
           S+EVE + A LPE VE    KVEEKSPE QP  E  P  EP ++EEPKPEA E DQ  +S
Sbjct: 19  SLEVEPA-APLPETVEV--VKVEEKSPEEQPVIEADPEVEPTNLEEPKPEAPEPDQTDES 78

Query: 63  AKAPEEAVEAAEEPRVEEE-EKKEEAA-EAESVDKE-AVPAAEEP-KAEESQTAEPAAEP 122
            +AP E+    EE +VEE+ EKKEE     E+V+KE AV   EEP KAEE   AE  AEP
Sbjct: 79  TEAPVESANPVEESKVEEDQEKKEETVVTTETVEKEEAVAEDEEPAKAEERPAAEVEAEP 138

Query: 123 AAAAVEDEKPVEKEKAAEVAEEKSQE 144
               VE+EK VE+EK  EVAEEKSQE
Sbjct: 139 P---VEEEKVVEEEKPVEVAEEKSQE 158

[Close]

BLAST of MC03g_new0268 vs. ExPASy TrEMBL
Match: A0A1S3C9M0 (probable serine/threonine-protein kinase kinX OS=Cucumis melo OX=3656 GN=LOC103498212 PE=4 SV=1)

HSP 1 Score: 75.1 bits (183), Expect = 2.59e-14
Identity = 82/146 (56.16%), Postives = 95/146 (65.07%), Query Frame = 0


Query: 3   SVEVESSVANLPENVEAPEAKVEEKSPEVQPASEESPVAEPADVEEPKPEATEADQAVQS 62
           + EVE + A LPE VE    KVEEKSPE QP  E  P  EP ++EEPKPEA E DQ  +S
Sbjct: 2   ATEVEPA-APLPETVEV--VKVEEKSPEEQPVIEADPEVEPTNLEEPKPEAPEPDQTDES 61

Query: 63  AKAPEEAVEAAEEPRVEEE-EKKEEAA-EAESVDKE-AVPAAEEP-KAEESQTAEPAAEP 122
            +AP E+    EE +VEE+ EKKEE     E+V+KE AV   EEP KAEE   AE  AEP
Sbjct: 62  TEAPVESANPVEESKVEEDQEKKEETVVTTETVEKEEAVAEDEEPAKAEERPAAEVEAEP 121

Query: 123 AAAAVEDEKPVEKEKAAEVAEEKSQE 144
               VE+EK VE+EK  EVAEEKSQE
Sbjct: 122 P---VEEEKVVEEEKPVEVAEEKSQE 141

[Close]

BLAST of MC03g_new0268 vs. ExPASy TrEMBL
Match: A0A0A0LTG9 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G187170 PE=4 SV=1)

HSP 1 Score: 71.6 bits (174), Expect = 5.16e-13
Identity = 82/146 (56.16%), Postives = 96/146 (65.75%), Query Frame = 0


Query: 3   SVEVESSVANLPENVEAPEAKVEEKSPEVQPASEESPVAEPADVEEPKPEATEADQAVQS 62
           + EVES+ A+LPE VE    KVE+KS E QP  E  P  EPA++EEPKPEA E DQ  +S
Sbjct: 2   ATEVESA-ASLPETVEV--VKVEKKSSEEQPVIEADPEVEPANLEEPKPEALEPDQVEES 61

Query: 63  AKAPEEAVEAAEEPRVEE-EEKKEEAAEA-ESVDKE-AVPAAEEP-KAEESQTAEPAAEP 122
            +AP       EE +VEE +EKKEE   A ES +KE AVP AEE  K EES  AE  AE 
Sbjct: 62  TEAP------VEESKVEEGQEKKEETVVATESEEKEEAVPEAEESAKVEESPAAEVEAE- 121

Query: 123 AAAAVEDEKPVEKEKAAEVAEEKSQE 144
           A   VE+EK +E+EK  EVAEEKSQE
Sbjct: 122 AKPQVEEEKAIEEEKPTEVAEEKSQE 137

The following BLAST results are available for this feature:

BLAST of MC03g_new0268 vs.


Match Name	E-value	Identity	Description

BLAST of MC03g_new0268 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022142401.1	5.18e-72	100.00	uncharacterized protein LOC111012542 [Momordica charantia]	[more]
XP_038895685.1	5.11e-24	62.76	cytochrome c1-like [Benincasa hispida]	[more]
KAA0054325.1	2.01e-14	56.85	putative serine/threonine-protein kinase kinX [Cucumis melo var. makuwa] >TYK123...	[more]
XP_008458953.1	5.35e-14	56.16	PREDICTED: probable serine/threonine-protein kinase kinX [Cucumis melo]	[more]
XP_004139547.1	1.07e-12	56.16	uncharacterized protein LOC101220582 [Cucumis sativus] >KGN65063.1 hypothetical ...	[more]

BLAST of MC03g_new0268 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1CM25	2.51e-72	100.00	uncharacterized protein LOC111012542 OS=Momordica charantia OX=3673 GN=LOC111012...	[more]
A0A5D3CKL4	9.74e-15	56.85	Putative serine/threonine-protein kinase kinX OS=Cucumis melo var. makuwa OX=119...	[more]
A0A1S3C9M0	2.59e-14	56.16	probable serine/threonine-protein kinase kinX OS=Cucumis melo OX=3656 GN=LOC1034...	[more]
A0A0A0LTG9	5.16e-13	56.16	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G187170 PE=4 SV=1	[more]

BLAST of MC03g_new0268 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description

InterPro

Analysis Name: InterPro Annotations of Bitter gourd (Dali-11) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	COILS	Coil	Coil	coord: 78..98
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 123..144
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 68..110
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..144

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
MC03g_new0268.1	MC03g_new0268.1	mRNA