MC03g_new0237 (gene) Bitter gourd (Dali-11) v1

Overview


Name	MC03g_new0237
Type	gene
Organism	Momordica charantia cv. Dali-11 (Bitter gourd (Dali-11) v1)
Description	Unknown protein
Location	MC03: 10761375 .. 10769131 (+)
RNA-Seq Expression	MC03g_new0237
Synteny	MC03g_new0237

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGCCGCCGTGCCATTCGCCGTCGCCACTGCTCGCCAACCTTAACCCTAGCCACCACTCTATCCCTAACCCTAGCCCTTGTCGTCGACCTAACCGTTCTTCCAATCGCCGCCGCCCCTCTAATCCTAACCCTAACACTAACCCCCTCTCTAATCCTAACCCTAATCCTAGCCGCCGCCCCCTACTTTGTCGTCCTTCGTCGTCACTACCCGCCCTCACCTTTGCCATCGCCGTTGTTCCTATTAACACCGTTGCCACATCCGCGCCGCTAGGGTTTCTCTTTGTGGCCGTTTTCTCATCCAATCTCCTCCGTCCGTTTTTCTCCGACGTAGTCGCCGAATTCTGGGTCTTCCTCCGACGCAGTCGCACCTTTCGTCTTCCTCAGACGCCCCCAACCCGTTTTCCGACGTCTCTGAAACCACCAAATTGCCCGTTTTCCGACGTCTCTGTAACCACCAGATTACTTTCAGGTGTGGGTCATTGAGAAGTTGCAGCATTGAAAACAACTATTATTGGATTCAGTAGTGGGTCATGGATTTGAGAAGTTGTAGCATTGAAAACAACTATTATTGGATTCGTGTGACTGTAAAAAACTTTAGGGAGAATGTTCAGATTTCTCTTCAAATTTCCCAACTTCAGTGGTTAGAAAAGACTTTGGTGGAACTACTACATTTTCCATTGCATTCGAGATTTCTTATGCTAAGTTAGGGATGGGAATGGAACTTGTCGACTCCAAAGAAAGAGATTCTTGCACGGCTGGTTTTTGGAATGCATTGTTTGGCCCGCATCGGGTGGAAGAAAATTCATAACTGTACCTGCAGGGTCTAGAAAGAACGGCTGGGTAACCTTTTGGGACATGATAAAAAACTCCTTGGTGAACTCCAATAGAAAGCTTTTGAAGGGGGCCTCCAGCTCTTCATTTGCAGAGAGGTTAAGAAAATAGATAGCATGATGGCATCCCCTATCGTGGAGGACGAGGTTTTTGAGAGAAGAAAAGGAAGCAACTCATATTGGGTTCAAAAGGAATCCGAAGTTCTGGAAACAGATTGGGATAGCGTCATGGTTATTTCAAGGTTTAGTGTTCAAGATAGTTGGAAGGCAGTTGTTGTCTCCCTCAAAATTGCCAAGTCAACCCCTTCTTGACAGATGAGACTTTATTTAGATTCAAAAGTGGAAGTCCTTTAAACTATGATTGGCTCAATGGCAAATGGCGCAAGTTAGATGGATTTCACGTGAAAATGGAGAAGTGGGATCTTGAAAAACATGGCAGGAACGAAATGACGGTGTGTTTTGGTGGCTGGGTGAAAATTTACAACTTACCTTTAGAGCTTTGGAACACAAATTGCTTCAAGGCCATTGGAACCCATCTCGGAGGTTTGAAGAAAATCTCTTCAACAACACAACCTAGTAGACTATTCAGCAGCCTTCATTCAAATAGAGAAGAATGTTTGCGACTTTATTCCAGCTTCTATTGAGATAACTACAAAATATGGAGTGTTTGTGGTAAAAGTGGCTGCCATAAAGGAAGCTACCAAGTCACCATTTCCATCCGTTCAGCTTTCAAAGACTTCGTCTATTGCTGATTGATAACTCTCCAAAAGAGAGTTATTCTGGTGATTATTTGGGTGAAAATGTACATTAAAATGTCAAACTGTGTCGGTTTTAGGTCATAACTAGCATGAATAGTGTTTAATTGCAAATTCTTAGCTAAATGTCCTTAGTCTTGAGAACTTTAGCCAAAAACAGCATAAACTCTCGTATTTGTGATTCATTTGCACAGGTTTTTAAAGAAGAGCTAAGAAGAGAAGGAAGTGTTGAACCAGAGAAGAAAAGTCAAAGCATTTTCAAGTCAGAGCATATAAAAGCTGGAGCATAGCGATGCCAGAGCATGAGTGTCCGTACAGTTAATTCAAAAATACGGGATTTACATATGTCTGTACAATCCCCAGTCGGGTGCCCTAAAAACGGGACCCGATATTTAAAGGGAATGTTGCCCTAGCCGACAGACACGCAGATCCCAAGGAAGACAAAAATTGAGAGTTGAAAAGACCAAGGAACGGAATATACCCATTTTTGGGAGGAGAGCTGAAGCCAAAGAGGGGAAGTTCGCCATTTAGCCATTGTTCTGCTATGGGTTGTATTTCTTCTTCTTCCATTTTGTTTTCTTCACCCATTAGGAGCTAAACCCTATTTTGGGGGAGGTTTACATGTTGTAACTGACTTGCGACCGAACCTCTAGCTGCTATATTTATTTTTAAGCAAATCTGAATTCATTTCTTCAATCTTTGCATTACTGTTGGTCGTTGTTTCGTGTATGCTAGCTTCAATATTGATCCAATAGGGCTTGTAGGTGCTGATTTGTTTTGCTTGTGGTTAGCACTTTTCTATGGCTACAGGGATACTCAGGAATGGGGTCCCCTAATCATGCCAATAGTTTGAGTTTATTGCTTGGGTAACTAGCAACGGGAGTTGTATTCACTCATGTTTGGGGTATCTCGGGAGGGAACCGAGTCGAACTGGGCACTAGTAAATGTTAGATACGCTAGAGGGTAGGTTGATAACTTGTGAAAGCATGCTAAATCTCCCCCACTTTTTCCATATATGTTAATCCTCCGTTATCGCTTTCTGTGCTGCTACTTTCTTGTGTTGATAGCTTCGAAACTTTTGTCTTTTGCAAAGTTCTATCGTCCTATTATTACTTTATTTTAATTCTCCTAGATAAAATACATACCCAAACTCTGCACATATTTTATTTGTTGGTATCTGCTTGTATCGTTAAAATATCAACCAAAAATCCTTGTGGATACGACCTTGTTACGTACTACCACTGACGAATCGTGTATACTTGCACGTGCTGTCGACACAGTTGTGTGGACGCAACATTGATTCTTCAAATCCATTGGATCTGAGATACATTCCTTGGGTTTTATACTAAATATGGCATATCGATGGATCCTTCTAAAATAGCTGCCATCCAACAATGTCCTACACCTACCTCAATTAGGGATATCCAACGCTTTCTAGGATGAGCCTCTTTTTATAGAAAATTCATCCGTCGTTTTAGTACTATAGCAGCACCTTTAACCGAGACTTTAAAAAGGGCAAGTTCTCTTGGGGTACCAAGCAAACAAGTAGCTTCCACACTCTCAAAGACCGGTTAAGTTCTACACCTGTTCTGGCTTACCAGATTTCTCCCTACCCTTTGAAGTGGCTGTAGACACCTCTCACATAGGTATAGGTGCAATTTTATCACAAAAGGGTCACCCTATCAAATATTTTAGGTGAGTAAAAAACTTACACCACTGAGACAAAAATGGTGCACATATGAACAAAAGTTGTATGCATTGATTAGGGCACTTAAACAATGAGAACATTATCTTTGCAAGGAATTTATCCTTTTTATGGATCATTTATCTCTTAAGTATATACAAACATATAAAACTATCAATAGGATGCATGCCCGTTGGATCTCATTCATATAGAAATTTGATTTGTTATTAAGCATGAAGCTGGAATTACTAATAAGGTGGCTGATGCGTTAAGCAGAAAAACTAGTCTTTTAACTCTTCTTTCAAGTCAAGTCATTGCTTTTGACCATCTACCTACTTCCTACGAGAATGACAGTGACTTTCACAGCAACTGGGTTCAACGCAACCAACATGTCAATAGTCAAGATTCCATATTCTGATGGATATCTTTTTAAAGGAGACCGTTTATGCATTCCACATACTTCCCTTCGTGAAACCTTAATCCAAGATATGCATAGTGGTGGTTTGGCTGACCACCTACGTCGTGATAAGACTTTGGATCTAGTGGCAGCACGTTTTTTTTTTTGGCCACAATTACGAAAAGATGTCAATAACTTTTTTAATCAATGTCTTACTTGACAAACGGCCAAAGGACAATCTCATAATACCGGACTATACTCCCCCTTCTTTTTTTTGAAAAGAAACAAAGCATGTATTAATCACAAAAAAGGAGAACAGCCTAGAGGCGAGGGCCAAGGAGGCCCCCCCCACCAGCTATACTCCTCCTTCCAATTCCTAAATCAATTTGGGAAGATTTATCCATGGACTTTGTTCTTGGTCTTCCCAAAACTCAGTAGGGTTATGACTCGATTTTGGTTGTCGTTGACCGATTTAGCAAGATGACACACTTTCTTCCATGTAAAAAGACATCATATGCAATTTATGTGGCAAACCTTTTTTTCCGTGAGATTGTCCGCTTACATGGCATTCCGAAAACCATAGTCTCTGATCGGGACGTCAAATTCTTGAGTCACTTCTGGAAAACATTGTGGAAGAAATTTGATAAAGAATTAAAATTCAACACAACCAGCCATCCTCAAACGGACGGCCAGACGGAGGTCTAACAGAACCTTATGAAACCTCATAAGGTGCTTGGGGACCAATAAACTGAAGCAGTGGGACCTTACACTTGCCCAGGCTGAATTTGCCTACAATCATATGAAGAACAGATCTATAGGGAAGTCCCCCTCCAAGATTGTATATACTGAACTTCCTAGACTAACCGTGGACCTTGCTAATATTCCTTCCGCTTTGATTTTAATCAAGAAGCAGAACACATGGCTAAGCGGAATGTGGAGTTGCACAAAGAAGTAACAGACAACCTTATGCAAGCCACAGCAACCTATAAGGCTAGTGCAGACAGCCATTGCCGAGCAAAGTCTTTTTCTGAAGGAGATCTAGTAATGGTCTATGTAAAGAAGTCCCAAAAGGCACATATAACAAGCTGCAGAACAAGAAAATTGGACTGTTTGAGATCCTAAAGAAGTACGGAAACAATGCATTTCGAGTCAACTTACCGGCAGATCTTAAAATACACCCAGTATTCAATATTGAGGATATATATGAGTACCAAGCAGAGGATGCTTTTACACTAGCAGCTTAAACTCGAGGACGAATTTTTCCTGGACAAGAGGTAATTTGATGTAAATTAGTTACCGTCTGTTTTGTTTTAGTAGCTGTTAGTTCAGTTTATAGCAATAATTAGCCGTTAGTTTGTTAATATCTTCTGTTGAAGGTTCAATTGACTGCCTATAAAATGCCAACCTTCTCCTATTGTAAAGTCAGAAGCTAATCAATAATATTTTCTCAATTGGTTTACACCAACCACCTAATTGATACACTAAAAACATAAAATTTTGCAGCAAAAATTGAGATCCACTACATATAGAGACTCCTAAACCAAAGATTGATGAGAGAGCAGCAACCTAAATATCACCAAAGAGAAACATCAACTCTCCAATCAAGCCAAACACAAGAATAAAACCAAAACTACACCCCTAGAGGACAAGAAAGGGGTAGGGGAGTAGGGAGTAGAAAGAGAGAGACAGCCATACCCATCACTTCATGATGCTCCATTACATGGCGAGATAAACGCTCAGCCACTTTATCAAGTTGAGCTAATCTCTTGGTAGCCTTAAAATAAAGTTTTTCAAGAATTACTCAATGGGAAGAGAGATGAAAGTCAAATTTGAATAATAAAATCGGATGAAAAAAAACCAAACTATCTCAGATTATTGGATATGAATAAATGACTATAATAACTGTATAAGCATTAAAGTAGTAGATGACTGGTATTCCCATATAGTGCACTTAAATTGGGGACATGGATAAGGACAATTTACAGAATAGTTTAGATAGAAATTAGGAAAGAGAAACGAAAAAGGACAGAAACTCAACACAGACGGTAAATAATAAAAAGGATGCAGAAGAAAAGAATGTGAGATCATTAACCAAAAATTCCTAATCAATACAATATACAGTTCGTTTTTCCCATATGTCTTGTATATGTATCTACCCTGATGCTCCAAATTAACAGAGGGACGCAGGAAGAAGACTAGTTTCCCATATGATATACAATATACATCAAACAAAAAAATCATTCAGCCATGAACTTCAACTTCAGATACCAATGGAAAGCCAATGCCTAGGAAACTGAAGAAAAGAAAGAGTAAAGGATCTACAGATCCATAAAAATCCCAAGTAGCAACTTTAACATTTTGTTTATAGGGAGAAGGGTCTTTAGCATTTAAAGAGGGCATCTCGAAATTACGCAGCATGGGTCTCATGAGAACAACTACTTTACGAATCTCTATCATTTAGGAAATCAACTAGGTTTCATGATTAGATCGCTTCAACCAGAGTGTGAATTATATATCTTATTAGATCTTTTTCTAATGTATTTTCCTATAATAGAGCTTTCAGTTGTCCATTTTATTAAAGTTCTATTTGGCAGTGAATTTATTATTATGGATTGAACCGCATCCCAACAAGTGGTTTGAGATTATGATATTTGTTCTTCAATTATAAGGCCTACCTATAAGTCCAAAAAAAACTATAACCCAGAGAACTTAAGAATAACTCGTTTGGTTGTCCTGGATAGGTTGATCACCTCTTGAACTGCCTATGTCCTTCCTGTTTATCCTTCCCCATAACCACAAATAACTTTGAGCTTCTGGTAAAAGTTACTTTCCCATAACTACTCCTTCTAACTCTTGTTGTTCTCCCCTTATAATTTTAGGTAGCCATCATACTACTAAAACCCTTTACTTTCCTCTGTGGAAGCTCAAAATTTGTATGAAGGTCAAATTTTTTGCTTAGCAAGTCTTATATGGGAAATTCAACACTAAAGATCATATTTAGAGGCATTCTTCCTTCTTATTGGTCTTGGAATTTAAGGGTACTCCGTTCAAGCCTCAAAGACATAAGGTTTTTCTTATGCAGCATAGGCATAAGCCTTGAGGCACCTCACAACCATCTCAAACAATTTAAGAGCGTGGAGAGTAATTAGCGGTTATTTTGTAATTTTGTTTGAAATTGCTAATTGTGCCAGTTAGTATAGTTGGATTAGTAGACTTTAATCTTATATAAATAGTGGGTTAATCGTTTTTATTATTAATAAACTCTAGTTGGAGTTCTTTCAAGATTCCTTTCATGTTTAACAGTAAAATCCCCCCAGGGTTAGAGGACCGAAGAGCCTTAGAGCTTAAGAAGAATTGGTTTTTCACTATAGCATCAAATTGCTTTTTTCCTCCCTCATAGAAGGAATGCCAGCTGTCCCTCCTAAATTTTGTAAGACCCTTTGGAAGCTAGATCTATCCAAAAAGTGTAAGGTTTTTATGTGGTCTTACACCCTCATAGAGCTCTTTATTTTATTTTATTTTTTTATAAATAACTTGAGAGTGGAGTTAATTACAAAAATAATGAGCGAATGGAATTAATCACAAGAACTAATCACAAAAAAGGAGCAAATAACCTAAGCGCAAGGGAAGAGACATCCCCCTCCTTATAAATCTAATGATACAGAAGTTTTCATATCATGTAGGACAAAGGAGAAATCCCTTAGTGGGCTCAAAAAATATGGATGGTAAGATAGAAAGAACTCCCTCTATAGTCATCAATCTAAATTGGAGCTCCTTGTGCAGAAGAGCCTAGAAGGATAATCATCTCTCTTATTTTTGTCGGAAGTGAAATTAGTTTGGTCGATGGCTTCCATTGTTTTCAGGCAAAGGTGGTTTCCTTTGAAGATAGCAAGTGGCTAGCCGAAACACATGTAGCGGTTCATGGAGGTTTCTCACGGGAGGCGGCGAAATTCTTTTACCAGGAGAGAGAAGGAAACGATTTCAGCTCTGTTGACCGATGGAGGATAGAAGATGGGTGCAATTACCCGATGGTCAACACTAGGTACTCCCCTCACCCCTTCGAGACGGCTGGAAATGGGGACTCTGAGTAG

mRNA sequence

ATGCCGCCGTGCCATTCGCCGTCGCCACTGCTCGCCAACCTTAACCCTAGCCACCACTCTATCCCTAACCCTAGCCCTTGTCGTCGACCTAACCGTTCTTCCAATCGCCGCCGCCCCTCTAATCCTAACCCTAACACTAACCCCCTCTCTAATCCTAACCCTAATCCTAGCCGCCGCCCCCTACTTTGTCGTCCTTCGTCGTCACTACCCGCCCTCACCTTTGCCATCGCCGTTGTTCCTATTAACACCGTTGCCACATCCGCGCCGCTAGGGTTTCTCTTTGTGGCCGTTTTCTCATCCAATCTCCTCCGTCCGTTTTTCTCCGACGTAGTCGCCGAATTCTGGGTCTTCCTCCGACGCAGTCGCACCTTTCGTCTTCCTCAGACGCCCCCAACCCGTTTTCCGACGTCTCTGAAACCACCAAATTGCCCGTTTTCCGACGTCTCTGTAACCACCAGATTACTTTCAGGTGCAAAGGTGGTTTCCTTTGAAGATAGCAAGTGGCTAGCCGAAACACATGTAGCGGTTCATGGAGGTTTCTCACGGGAGGCGGCGAAATTCTTTTACCAGGAGAGAGAAGGAAACGATTTCAGCTCTGTTGACCGATGGAGGATAGAAGATGGGTGCAATTACCCGATGGTCAACACTAGGTACTCCCCTCACCCCTTCGAGACGGCTGGAAATGGGGACTCTGAGTAG

Coding sequence (CDS)

ATGCCGCCGTGCCATTCGCCGTCGCCACTGCTCGCCAACCTTAACCCTAGCCACCACTCTATCCCTAACCCTAGCCCTTGTCGTCGACCTAACCGTTCTTCCAATCGCCGCCGCCCCTCTAATCCTAACCCTAACACTAACCCCCTCTCTAATCCTAACCCTAATCCTAGCCGCCGCCCCCTACTTTGTCGTCCTTCGTCGTCACTACCCGCCCTCACCTTTGCCATCGCCGTTGTTCCTATTAACACCGTTGCCACATCCGCGCCGCTAGGGTTTCTCTTTGTGGCCGTTTTCTCATCCAATCTCCTCCGTCCGTTTTTCTCCGACGTAGTCGCCGAATTCTGGGTCTTCCTCCGACGCAGTCGCACCTTTCGTCTTCCTCAGACGCCCCCAACCCGTTTTCCGACGTCTCTGAAACCACCAAATTGCCCGTTTTCCGACGTCTCTGTAACCACCAGATTACTTTCAGGTGCAAAGGTGGTTTCCTTTGAAGATAGCAAGTGGCTAGCCGAAACACATGTAGCGGTTCATGGAGGTTTCTCACGGGAGGCGGCGAAATTCTTTTACCAGGAGAGAGAAGGAAACGATTTCAGCTCTGTTGACCGATGGAGGATAGAAGATGGGTGCAATTACCCGATGGTCAACACTAGGTACTCCCCTCACCCCTTCGAGACGGCTGGAAATGGGGACTCTGAGTAG

Protein sequence

MPPCHSPSPLLANLNPSHHSIPNPSPCRRPNRSSNRRRPSNPNPNTNPLSNPNPNPSRRPLLCRPSSSLPALTFAIAVVPINTVATSAPLGFLFVAVFSSNLLRPFFSDVVAEFWVFLRRSRTFRLPQTPPTRFPTSLKPPNCPFSDVSVTTRLLSGAKVVSFEDSKWLAETHVAVHGGFSREAAKFFYQEREGNDFSSVDRWRIEDGCNYPMVNTRYSPHPFETAGNGDSE

Homology

[Close]

BLAST of MC03g_new0237 vs. NCBI nr
Match: XP_022149859.1 (uncharacterized protein LOC111018186 [Momordica charantia] >XP_022149860.1 uncharacterized protein LOC111018186 [Momordica charantia])

HSP 1 Score: 92.8 bits (229), Expect = 4.10e-18
Identity = 44/76 (57.89%), Postives = 55/76 (72.37%), Query Frame = 0


Query: 158 AKVVSFEDSKWLAETHVAVHGGFSREAAKFFYQEREGNDFSSVDRWRIEDGCNYPMVNTR 217
           AKVVSFEDSKWLA   V +HGGFS EAA+ F+Q       +S+DRWR+E+GCNYP VN +
Sbjct: 204 AKVVSFEDSKWLARKDVGIHGGFSSEAARSFHQGSAEQSANSIDRWRLENGCNYPGVNIQ 263

Query: 218 YSPH-PFETAGNGDSE 232
           Y    PF++A NG S+
Sbjct: 264 YPNFIPFKSARNGGSK 279

[Close]

BLAST of MC03g_new0237 vs. ExPASy TrEMBL
Match: A0A6J1D6X4 (uncharacterized protein LOC111018186 OS=Momordica charantia OX=3673 GN=LOC111018186 PE=4 SV=1)

HSP 1 Score: 92.8 bits (229), Expect = 1.99e-18
Identity = 44/76 (57.89%), Postives = 55/76 (72.37%), Query Frame = 0


Query: 158 AKVVSFEDSKWLAETHVAVHGGFSREAAKFFYQEREGNDFSSVDRWRIEDGCNYPMVNTR 217
           AKVVSFEDSKWLA   V +HGGFS EAA+ F+Q       +S+DRWR+E+GCNYP VN +
Sbjct: 204 AKVVSFEDSKWLARKDVGIHGGFSSEAARSFHQGSAEQSANSIDRWRLENGCNYPGVNIQ 263

Query: 218 YSPH-PFETAGNGDSE 232
           Y    PF++A NG S+
Sbjct: 264 YPNFIPFKSARNGGSK 279

The following BLAST results are available for this feature:

BLAST of MC03g_new0237 vs.


Match Name	E-value	Identity	Description

BLAST of MC03g_new0237 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022149859.1	4.10e-18	57.89	uncharacterized protein LOC111018186 [Momordica charantia] >XP_022149860.1 uncha...	[more]

BLAST of MC03g_new0237 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1D6X4	1.99e-18	57.89	uncharacterized protein LOC111018186 OS=Momordica charantia OX=3673 GN=LOC111018...	[more]

BLAST of MC03g_new0237 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description

InterPro

Analysis Name: InterPro Annotations of Bitter gourd (Dali-11) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 10..44
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 45..59
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..62

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
MC03g_new0237.1	MC03g_new0237.1	mRNA