MC03g_new0186 (gene) Bitter gourd (Dali-11) v1

Overview
NameMC03g_new0186
Typegene
OrganismMomordica charantia cv. Dali-11 (Bitter gourd (Dali-11) v1)
DescriptionUnknown protein
LocationMC03: 8483142 .. 8484843 (-)
RNA-Seq ExpressionMC03g_new0186
SyntenyMC03g_new0186
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGAACGAAACTCATATGATTGCTTGTAAACAGGCTTGGGTGTACGAGGTCGTACCAGCTCTTCGCAGACATGGCATTGATGAACTGAATGATACAGCAGTGCCTTGCATATTTCGTTACTTGTGTCTCAAAATCGTCACCAAAGTTGCTCTCAAACGCGGGGTGTTCGATTCATCTGAGGTTGGGAAATTATTCCAACCCTATAGTTTTCTCTCTCTCAGGTCAAGTATAACCATGTGCGAAATAATTAATCTTTACTAATCATGCACTTATATTTTGTCGACACGTGCAGTTGGTTGTTATCCAGCCTCTAGTAGAGTCTGATGCAGAGAGGCTGTATCGAGAGTCGACCTTCCCAGCTAGGGCTGATAGCTATCGCGCTGCCGCAGCTGCGACCGCATCAACTTGCACTGATGGAGTTGGAACTACTGAGCTACACAACTGTTCAGAGTTTGTTGATGATGCCGAGTTCGTCGAGTTACTGCGGCCGTACACTCAAATGACTCACATACCTGAAGGGACAGTAGACAACGCATCAGACATACCTACTTCAAGGATGGTGGAAGAAGCTGGAATGATGGTTCAGCCTATAGAACCAATGAGAACCCGAGATAGTCCTGCACCGACGTTTATAGGATCTGAATCAATCCCTATGTCGGAAGGACACGGTGGATCATATGAGGACGTATCTGGTGGACTGTCAAATGATCGTATAGAGGCTTTCGAGAAAGGGTTGGACACCCTTCGGTTGGAGATGAAGTCCGAGCTACGTGAGATTAGATCGTACATCAAGGAGATGATGACAATGATGCACAGCCTTTTAAGGGTAATGTATCATTAATGGTATAATGCATAGTCTTATGACCAAATTTAGCTAAGCATTCATCTTATGTTGTAGGGTGCAAGCACGGACACTGGTGCACCTGTTCGTCCTGAACCTGATGCTGAGAGGCCGACCGTGTCTGGTGACATGGATATTGAGAACACTGATGGTGTTCGAGATAATCATAACATGCAAGGCGCTGAAGAGTTTGATAAGGGCGACGACAGACCAGTATGGTTGGTGGATAAAGACAGAGTAGACAACGTACTTCAATGTGATGTGCTGGACGTTGATGTCAGTGGAGTGCCGACAACCGGGGGCACGGACACCGCTCAAACCATTGAGCCCTCAACTACATTAGAAGTTAACCTCTATACCACCGGCACTGTCCCAGCGAGACCCAATGAACAATGTCTTGGCTGTACCGCCGGTACATCTTCGCATGATCAACCATCCCCCACAAATCCCCTCCGTAAAAGTAGTGGCGAACAACAGAGCAACGTAGTTGACGGCCGCTCAACAAATGGGGCTGTTGAGGCGGGACCCGATCAGCCTTGTCACCAATCTACCATTGACACAGCATCCCACGATGAACCGTCCTCCCTTGCCACAGTCGGTCAAACCACAGGTGAGCGAGAGTCCGCCTTAGTAGAGGCCTCATCCAGTACCGTGCCTGACAATGTTACACTCGAACAAGTTTGTCCCTTACCTACCAGTGACTCCACACCGCACAATCAACCGTCCTCCACTACTCCCGACGTTCGAACTATAGATGAGCATCCATCCACCTTAATAGGTAATCCACCCGCGACCACCAACGTTGAACCAAACCTTCATGGAGCAAGCCCTCATTATACCGTCGACACTGGACCTCAATAG

mRNA sequence

ATGAACGAAACTCATATGATTGCTTGTAAACAGGCTTGGGTGTACGAGGTCGTACCAGCTCTTCGCAGACATGGCATTGATGAACTGAATGATACAGCAGTGCCTTGCATATTTCGTTACTTGTGTCTCAAAATCGTCACCAAAGTTGCTCTCAAACGCGGGGTGTTCGATTCATCTGAGTTGGTTGTTATCCAGCCTCTAGTAGAGTCTGATGCAGAGAGGCTGTATCGAGAGTCGACCTTCCCAGCTAGGGCTGATAGCTATCGCGCTGCCGCAGCTGCGACCGCATCAACTTGCACTGATGGAGTTGGAACTACTGAGCTACACAACTGTTCAGAGTTTGTTGATGATGCCGAGTTCGTCGAGTTACTGCGGCCGTACACTCAAATGACTCACATACCTGAAGGGACAGTAGACAACGCATCAGACATACCTACTTCAAGGATGGTGGAAGAAGCTGGAATGATGGTTCAGCCTATAGAACCAATGAGAACCCGAGATAGTCCTGCACCGACGTTTATAGGATCTGAATCAATCCCTATGTCGGAAGGACACGGTGGATCATATGAGGACGTATCTGGTGGACTGTCAAATGATCGTATAGAGGCTTTCGAGAAAGGGTTGGACACCCTTCGGTTGGAGATGAAGTCCGAGCTACGTGAGATTAGATCGTACATCAAGGAGATGATGACAATGATGCACAGCCTTTTAAGGGGTGCAAGCACGGACACTGGTGCACCTGTTCGTCCTGAACCTGATGCTGAGAGGCCGACCGTGTCTGGTGACATGGATATTGAGAACACTGATGGTGTTCGAGATAATCATAACATGCAAGGCGCTGAAGAGTTTGATAAGGGCGACGACAGACCAGTATGGTTGGTGGATAAAGACAGAGTAGACAACGTACTTCAATGTGATGTGCTGGACGTTGATGTCAGTGGAGTGCCGACAACCGGGGGCACGGACACCGCTCAAACCATTGAGCCCTCAACTACATTAGAAGTTAACCTCTATACCACCGGCACTGTCCCAGCGAGACCCAATGAACAATGTCTTGGCTGTACCGCCGGTACATCTTCGCATGATCAACCATCCCCCACAAATCCCCTCCGTAAAAGTAGTGGCGAACAACAGAGCAACGTAGTTGACGGCCGCTCAACAAATGGGGCTGTTGAGGCGGGACCCGATCAGCCTTGTCACCAATCTACCATTGACACAGCATCCCACGATGAACCGTCCTCCCTTGCCACAGTCGGTCAAACCACAGGTGAGCGAGAGTCCGCCTTAGTAGAGGCCTCATCCAGTACCGTGCCTGACAATGTTACACTCGAACAAGTTTGTCCCTTACCTACCAGTGACTCCACACCGCACAATCAACCGTCCTCCACTACTCCCGACGTTCGAACTATAGATGAGCATCCATCCACCTTAATAGGTAATCCACCCGCGACCACCAACGTTGAACCAAACCTTCATGGAGCAAGCCCTCATTATACCGTCGACACTGGACCTCAATAG

Coding sequence (CDS)

ATGAACGAAACTCATATGATTGCTTGTAAACAGGCTTGGGTGTACGAGGTCGTACCAGCTCTTCGCAGACATGGCATTGATGAACTGAATGATACAGCAGTGCCTTGCATATTTCGTTACTTGTGTCTCAAAATCGTCACCAAAGTTGCTCTCAAACGCGGGGTGTTCGATTCATCTGAGTTGGTTGTTATCCAGCCTCTAGTAGAGTCTGATGCAGAGAGGCTGTATCGAGAGTCGACCTTCCCAGCTAGGGCTGATAGCTATCGCGCTGCCGCAGCTGCGACCGCATCAACTTGCACTGATGGAGTTGGAACTACTGAGCTACACAACTGTTCAGAGTTTGTTGATGATGCCGAGTTCGTCGAGTTACTGCGGCCGTACACTCAAATGACTCACATACCTGAAGGGACAGTAGACAACGCATCAGACATACCTACTTCAAGGATGGTGGAAGAAGCTGGAATGATGGTTCAGCCTATAGAACCAATGAGAACCCGAGATAGTCCTGCACCGACGTTTATAGGATCTGAATCAATCCCTATGTCGGAAGGACACGGTGGATCATATGAGGACGTATCTGGTGGACTGTCAAATGATCGTATAGAGGCTTTCGAGAAAGGGTTGGACACCCTTCGGTTGGAGATGAAGTCCGAGCTACGTGAGATTAGATCGTACATCAAGGAGATGATGACAATGATGCACAGCCTTTTAAGGGGTGCAAGCACGGACACTGGTGCACCTGTTCGTCCTGAACCTGATGCTGAGAGGCCGACCGTGTCTGGTGACATGGATATTGAGAACACTGATGGTGTTCGAGATAATCATAACATGCAAGGCGCTGAAGAGTTTGATAAGGGCGACGACAGACCAGTATGGTTGGTGGATAAAGACAGAGTAGACAACGTACTTCAATGTGATGTGCTGGACGTTGATGTCAGTGGAGTGCCGACAACCGGGGGCACGGACACCGCTCAAACCATTGAGCCCTCAACTACATTAGAAGTTAACCTCTATACCACCGGCACTGTCCCAGCGAGACCCAATGAACAATGTCTTGGCTGTACCGCCGGTACATCTTCGCATGATCAACCATCCCCCACAAATCCCCTCCGTAAAAGTAGTGGCGAACAACAGAGCAACGTAGTTGACGGCCGCTCAACAAATGGGGCTGTTGAGGCGGGACCCGATCAGCCTTGTCACCAATCTACCATTGACACAGCATCCCACGATGAACCGTCCTCCCTTGCCACAGTCGGTCAAACCACAGGTGAGCGAGAGTCCGCCTTAGTAGAGGCCTCATCCAGTACCGTGCCTGACAATGTTACACTCGAACAAGTTTGTCCCTTACCTACCAGTGACTCCACACCGCACAATCAACCGTCCTCCACTACTCCCGACGTTCGAACTATAGATGAGCATCCATCCACCTTAATAGGTAATCCACCCGCGACCACCAACGTTGAACCAAACCTTCATGGAGCAAGCCCTCATTATACCGTCGACACTGGACCTCAATAG

Protein sequence

MNETHMIACKQAWVYEVVPALRRHGIDELNDTAVPCIFRYLCLKIVTKVALKRGVFDSSELVVIQPLVESDAERLYRESTFPARADSYRAAAAATASTCTDGVGTTELHNCSEFVDDAEFVELLRPYTQMTHIPEGTVDNASDIPTSRMVEEAGMMVQPIEPMRTRDSPAPTFIGSESIPMSEGHGGSYEDVSGGLSNDRIEAFEKGLDTLRLEMKSELREIRSYIKEMMTMMHSLLRGASTDTGAPVRPEPDAERPTVSGDMDIENTDGVRDNHNMQGAEEFDKGDDRPVWLVDKDRVDNVLQCDVLDVDVSGVPTTGGTDTAQTIEPSTTLEVNLYTTGTVPARPNEQCLGCTAGTSSHDQPSPTNPLRKSSGEQQSNVVDGRSTNGAVEAGPDQPCHQSTIDTASHDEPSSLATVGQTTGERESALVEASSSTVPDNVTLEQVCPLPTSDSTPHNQPSSTTPDVRTIDEHPSTLIGNPPATTNVEPNLHGASPHYTVDTGPQ
Homology
[Close]
BLAST of MC03g_new0186 vs. NCBI nr
Match: XP_022157199.1 (uncharacterized protein LOC111023969 [Momordica charantia] >XP_022157208.1 uncharacterized protein LOC111023969 [Momordica charantia] >XP_022157213.1 uncharacterized protein LOC111023969 [Momordica charantia])

HSP 1 Score: 94.0 bits (232), Expect = 1.06e-16
Identity = 49/110 (44.55%), Postives = 68/110 (61.82%), Query Frame = 0 

Query: 11  QAWVYEVVPALRRHGIDELNDTAVPCIFRYLCLKIVTKVALKRGVFDSSELVVIQPLVES 70
           Q W YE++P+L R+G++ L+DTA+P IFRY C + +T   L+R VF+SSEL +  PLVES
Sbjct: 238 QVWAYEIIPSLMRNGVNRLSDTAMPRIFRYSCSQSITSKVLERDVFNSSELTITHPLVES 297

Query: 71  DAERLYRESTFPARADSYRAAAAATASTCTDGVGTTELHNCSEFVDDAEF 120
           +AERLYRE+ F  RA           S   D   + E  +   F +DA+F
Sbjct: 298 EAERLYREAPFDGRAAMEENTTGGRISDHDDRQASPERLDHDGFDEDAKF 347

[Close]
BLAST of MC03g_new0186 vs. NCBI nr
Match: KGN49944.1 (hypothetical protein Csa_000148 [Cucumis sativus])

HSP 1 Score: 55.5 bits (132), Expect = 5.38e-04
Identity = 25/69 (36.23%), Postives = 41/69 (59.42%), Query Frame = 0 

Query: 11  QAWVYEVVPALRRHGIDELNDTAVPCIFRYLCLKIVTKVALKRGVFDSSELVVIQPLVES 70
           Q W YE++ ++    +  LN+ AVP I R+ C   +    L+R VF+S  +V+   L+ S
Sbjct: 240 QVWAYEIISSIAGKAVTRLNNEAVPRILRWSCSYSLPSKLLQRDVFNSMRIVISPTLIMS 299

Query: 71  DAERLYRES 79
           DAE+ +R+S
Sbjct: 300 DAEKQFRDS 308

[Close]
BLAST of MC03g_new0186 vs. NCBI nr
Match: XP_031741885.1 (uncharacterized protein LOC105435430 isoform X2 [Cucumis sativus])

HSP 1 Score: 55.5 bits (132), Expect = 5.48e-04
Identity = 25/69 (36.23%), Postives = 41/69 (59.42%), Query Frame = 0 

Query: 11  QAWVYEVVPALRRHGIDELNDTAVPCIFRYLCLKIVTKVALKRGVFDSSELVVIQPLVES 70
           Q W YE++ ++    +  LN+ AVP I R+ C   +    L+R VF+S  +V+   L+ S
Sbjct: 323 QVWAYEIISSIAGKAVTRLNNEAVPRILRWSCSYSLPSKLLQRDVFNSMRIVISPTLIMS 382

Query: 71  DAERLYRES 79
           DAE+ +R+S
Sbjct: 383 DAEKQFRDS 391

[Close]
BLAST of MC03g_new0186 vs. NCBI nr
Match: XP_011654656.1 (uncharacterized protein LOC105435430 isoform X1 [Cucumis sativus])

HSP 1 Score: 55.5 bits (132), Expect = 5.85e-04
Identity = 25/69 (36.23%), Postives = 41/69 (59.42%), Query Frame = 0 

Query: 11  QAWVYEVVPALRRHGIDELNDTAVPCIFRYLCLKIVTKVALKRGVFDSSELVVIQPLVES 70
           Q W YE++ ++    +  LN+ AVP I R+ C   +    L+R VF+S  +V+   L+ S
Sbjct: 323 QVWAYEIISSIAGKAVTRLNNEAVPRILRWSCSYSLPSKLLQRDVFNSMRIVISPTLIMS 382

Query: 71  DAERLYRES 79
           DAE+ +R+S
Sbjct: 383 DAEKQFRDS 391

[Close]
BLAST of MC03g_new0186 vs. NCBI nr
Match: XP_022158064.1 (uncharacterized protein LOC111024638 [Momordica charantia])

HSP 1 Score: 54.7 bits (130), Expect = 7.34e-04
Identity = 28/72 (38.89%), Postives = 44/72 (61.11%), Query Frame = 0 

Query: 14  VYEVVPALRRHGIDELNDTAVPCIFRYLCLKIVTKVALKRGVFDSSELVVIQPLVESDAE 73
           +YE+VP+L   G++ L++TA+P I  Y C ++V    L+  V  S+ LV+  P VE++ E
Sbjct: 109 IYEIVPSLITPGVNRLSETAIPQIIWYSCSRVVGTKDLREEVHSSAVLVISYPFVETELE 168

Query: 74  RLYR---ESTFP 82
           R Y+   E  FP
Sbjct: 169 RDYQRGFEDLFP 180

[Close]
BLAST of MC03g_new0186 vs. ExPASy TrEMBL
Match: A0A6J1DSS5 (uncharacterized protein LOC111023969 OS=Momordica charantia OX=3673 GN=LOC111023969 PE=4 SV=1)

HSP 1 Score: 94.0 bits (232), Expect = 5.13e-17
Identity = 49/110 (44.55%), Postives = 68/110 (61.82%), Query Frame = 0 

Query: 11  QAWVYEVVPALRRHGIDELNDTAVPCIFRYLCLKIVTKVALKRGVFDSSELVVIQPLVES 70
           Q W YE++P+L R+G++ L+DTA+P IFRY C + +T   L+R VF+SSEL +  PLVES
Sbjct: 238 QVWAYEIIPSLMRNGVNRLSDTAMPRIFRYSCSQSITSKVLERDVFNSSELTITHPLVES 297

Query: 71  DAERLYRESTFPARADSYRAAAAATASTCTDGVGTTELHNCSEFVDDAEF 120
           +AERLYRE+ F  RA           S   D   + E  +   F +DA+F
Sbjct: 298 EAERLYREAPFDGRAAMEENTTGGRISDHDDRQASPERLDHDGFDEDAKF 347

[Close]
BLAST of MC03g_new0186 vs. ExPASy TrEMBL
Match: A0A0A0KM59 (DUF1985 domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_5G141180 PE=4 SV=1)

HSP 1 Score: 55.5 bits (132), Expect = 2.60e-04
Identity = 25/69 (36.23%), Postives = 41/69 (59.42%), Query Frame = 0 

Query: 11  QAWVYEVVPALRRHGIDELNDTAVPCIFRYLCLKIVTKVALKRGVFDSSELVVIQPLVES 70
           Q W YE++ ++    +  LN+ AVP I R+ C   +    L+R VF+S  +V+   L+ S
Sbjct: 240 QVWAYEIISSIAGKAVTRLNNEAVPRILRWSCSYSLPSKLLQRDVFNSMRIVISPTLIMS 299

Query: 71  DAERLYRES 79
           DAE+ +R+S
Sbjct: 300 DAEKQFRDS 308

[Close]
BLAST of MC03g_new0186 vs. ExPASy TrEMBL
Match: A0A6J1DYB0 (uncharacterized protein LOC111024638 OS=Momordica charantia OX=3673 GN=LOC111024638 PE=4 SV=1)

HSP 1 Score: 54.7 bits (130), Expect = 3.56e-04
Identity = 28/72 (38.89%), Postives = 44/72 (61.11%), Query Frame = 0 

Query: 14  VYEVVPALRRHGIDELNDTAVPCIFRYLCLKIVTKVALKRGVFDSSELVVIQPLVESDAE 73
           +YE+VP+L   G++ L++TA+P I  Y C ++V    L+  V  S+ LV+  P VE++ E
Sbjct: 109 IYEIVPSLITPGVNRLSETAIPQIIWYSCSRVVGTKDLREEVHSSAVLVISYPFVETELE 168

Query: 74  RLYR---ESTFP 82
           R Y+   E  FP
Sbjct: 169 RDYQRGFEDLFP 180

The following BLAST results are available for this feature:
BLAST of MC03g_new0186 vs.
Match NameE-valueIdentityDescription
BLAST of MC03g_new0186 vs. NCBI nr
Match NameE-valueIdentityDescription
XP_022157199.11.06e-1644.55uncharacterized protein LOC111023969 [Momordica charantia] >XP_022157208.1 uncha... [more]
KGN49944.15.38e-0436.23hypothetical protein Csa_000148 [Cucumis sativus][more]
XP_031741885.15.48e-0436.23uncharacterized protein LOC105435430 isoform X2 [Cucumis sativus][more]
XP_011654656.15.85e-0436.23uncharacterized protein LOC105435430 isoform X1 [Cucumis sativus][more]
XP_022158064.17.34e-0438.89uncharacterized protein LOC111024638 [Momordica charantia][more]
BLAST of MC03g_new0186 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
A0A6J1DSS55.13e-1744.55uncharacterized protein LOC111023969 OS=Momordica charantia OX=3673 GN=LOC111023... [more]
A0A0A0KM592.60e-0436.23DUF1985 domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_5G141180 PE=... [more]
A0A6J1DYB03.56e-0438.89uncharacterized protein LOC111024638 OS=Momordica charantia OX=3673 GN=LOC111024... [more]
BLAST of MC03g_new0186 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
InterPro
Analysis Name: InterPro Annotations of Bitter gourd (Dali-11) v1
Date Performed: 2021-10-25
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 201..228
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 255..284
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 478..492
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 343..505
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 399..470
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 343..386
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 241..284

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
MC03g_new0186.1MC03g_new0186.1mRNA