MC03g_new0131 (gene) Bitter gourd (Dali-11) v1

Overview


Name	MC03g_new0131
Type	gene
Organism	Momordica charantia cv. Dali-11 (Bitter gourd (Dali-11) v1)
Description	Unknown protein
Location	MC03: 6109784 .. 6110265 (+)
RNA-Seq Expression	MC03g_new0131
Synteny	MC03g_new0131

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGACTCTGGAGAAAAGTCCACAACGCTCTGATGACGATTGCCATCCGAGGAGGAGGCTAAACATGGATGACCCTCAATTGGGAGGAGTTGGAGACGAAACGAACCAACTAGGAGTCATAGAAATGCTCGAGATCCCCTCTACTACTGTTCCAGAGCAACTCAAGAATAAGTTTGCAGCCTTGGAAGAAAAGGTGGAAGGCATGTTTCAACGCATGACCCAACTACTCAAACGGTTAGAACAACAGGAGACAGATAAATCACCTCTACTCAGAGATCCCCGAAAAGGGAAAGAGTCCTGTACCAAGCGAGGTTGAAGAATCGACAAACAACTTGTAGGGCAGATGGATGCTGGGAGGAAATGACAGGAGGCGCACCCGAATTCTCGACTGTAGAAGTCCATAGAAGGACAAAAGATAAGCAAAGTCCCCGATACAGAATGAAGGCAAAGGCGACCAGAATAGCTGAGATCTCGAGTCATTAG

mRNA sequence

ATGACTCTGGAGAAAAGTCCACAACGCTCTGATGACGATTGCCATCCGAGGAGGAGGCTAAACATGGATGACCCTCAATTGGGAGGAGTTGGAGACGAAACGAACCAACTAGGAGTCATAGAAATGCTCGAGATCCCCTCTACTACTGTTCCAGAGCAACTCAAGAATAAGTTTGCAGCCTTGGAAGAAAAGGTGGAAGGCATGGCAGATGGATGCTGGGAGGAAATGACAGGAGGCGCACCCGAATTCTCGACTGTAGAAGTCCATAGAAGGACAAAAGATAAGCAAAGTCCCCGATACAGAATGAAGGCAAAGGCGACCAGAATAGCTGAGATCTCGAGTCATTAG

Coding sequence (CDS)

ATGACTCTGGAGAAAAGTCCACAACGCTCTGATGACGATTGCCATCCGAGGAGGAGGCTAAACATGGATGACCCTCAATTGGGAGGAGTTGGAGACGAAACGAACCAACTAGGAGTCATAGAAATGCTCGAGATCCCCTCTACTACTGTTCCAGAGCAACTCAAGAATAAGTTTGCAGCCTTGGAAGAAAAGGTGGAAGGCATGGCAGATGGATGCTGGGAGGAAATGACAGGAGGCGCACCCGAATTCTCGACTGTAGAAGTCCATAGAAGGACAAAAGATAAGCAAAGTCCCCGATACAGAATGAAGGCAAAGGCGACCAGAATAGCTGAGATCTCGAGTCATTAG

Protein sequence

MTLEKSPQRSDDDCHPRRRLNMDDPQLGGVGDETNQLGVIEMLEIPSTTVPEQLKNKFAALEEKVEGMADGCWEEMTGGAPEFSTVEVHRRTKDKQSPRYRMKAKATRIAEISSH

Homology

[Close]

BLAST of MC03g_new0131 vs. NCBI nr
Match: XP_022145129.1 (uncharacterized protein LOC111014646 [Momordica charantia])

HSP 1 Score: 73.6 bits (179), Expect = 4.19e-13
Identity = 37/71 (52.11%), Postives = 49/71 (69.01%), Query Frame = 0


Query: 1  MTLEKSPQRSDDDCHPRRRLNMDDPQLGGVGDETNQLGVIEMLEIPST---TVPEQLKNK 60
          MT E+SP+RSDD+C  +RRLN+DDPQ+GG  D T+Q  +     +P     T PE L+ +
Sbjct: 1  MTPERSPRRSDDNCSAKRRLNLDDPQVGGPEDGTSQPNLERQEGLPEAHALTTPEPLQKQ 60

Query: 61 FAALEEKVEGM 68
          FA LE+KVEGM
Sbjct: 61 FAVLEDKVEGM 71

[Close]

BLAST of MC03g_new0131 vs. NCBI nr
Match: XP_022158830.1 (uncharacterized protein LOC111025293 [Momordica charantia])

HSP 1 Score: 62.8 bits (151), Expect = 1.28e-08
Identity = 33/67 (49.25%), Postives = 43/67 (64.18%), Query Frame = 0


Query: 1  MTLEKSPQRSDDDCHPRRRLNMDDPQLGGVGDET---NQLGVIEMLEIPSTTVPEQLKNK 60
          MT E+SP+RSDDDC  +RRLN+ DPQ+GG  D T   NQ     + E  + T PE  + +
Sbjct: 1  MTPERSPRRSDDDCSAKRRLNLGDPQVGGPEDGTSQPNQERQEGLXEXXALTTPEPFQKQ 60

Query: 61 FAALEEK 64
          FA LE+K
Sbjct: 61 FAVLEDK 67

[Close]

BLAST of MC03g_new0131 vs. ExPASy TrEMBL
Match: A0A6J1CUA7 (uncharacterized protein LOC111014646 OS=Momordica charantia OX=3673 GN=LOC111014646 PE=4 SV=1)

HSP 1 Score: 73.6 bits (179), Expect = 2.03e-13
Identity = 37/71 (52.11%), Postives = 49/71 (69.01%), Query Frame = 0


Query: 1  MTLEKSPQRSDDDCHPRRRLNMDDPQLGGVGDETNQLGVIEMLEIPST---TVPEQLKNK 60
          MT E+SP+RSDD+C  +RRLN+DDPQ+GG  D T+Q  +     +P     T PE L+ +
Sbjct: 1  MTPERSPRRSDDNCSAKRRLNLDDPQVGGPEDGTSQPNLERQEGLPEAHALTTPEPLQKQ 60

Query: 61 FAALEEKVEGM 68
          FA LE+KVEGM
Sbjct: 61 FAVLEDKVEGM 71

[Close]

BLAST of MC03g_new0131 vs. ExPASy TrEMBL
Match: A0A6J1DWY0 (uncharacterized protein LOC111025293 OS=Momordica charantia OX=3673 GN=LOC111025293 PE=4 SV=1)

HSP 1 Score: 62.8 bits (151), Expect = 6.20e-09
Identity = 33/67 (49.25%), Postives = 43/67 (64.18%), Query Frame = 0


Query: 1  MTLEKSPQRSDDDCHPRRRLNMDDPQLGGVGDET---NQLGVIEMLEIPSTTVPEQLKNK 60
          MT E+SP+RSDDDC  +RRLN+ DPQ+GG  D T   NQ     + E  + T PE  + +
Sbjct: 1  MTPERSPRRSDDDCSAKRRLNLGDPQVGGPEDGTSQPNQERQEGLXEXXALTTPEPFQKQ 60

Query: 61 FAALEEK 64
          FA LE+K
Sbjct: 61 FAVLEDK 67

The following BLAST results are available for this feature:

BLAST of MC03g_new0131 vs.


Match Name	E-value	Identity	Description

BLAST of MC03g_new0131 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022145129.1	4.19e-13	52.11	uncharacterized protein LOC111014646 [Momordica charantia]	[more]
XP_022158830.1	1.28e-08	49.25	uncharacterized protein LOC111025293 [Momordica charantia]	[more]

BLAST of MC03g_new0131 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1CUA7	2.03e-13	52.11	uncharacterized protein LOC111014646 OS=Momordica charantia OX=3673 GN=LOC111014...	[more]
A0A6J1DWY0	6.20e-09	49.25	uncharacterized protein LOC111025293 OS=Momordica charantia OX=3673 GN=LOC111025...	[more]

BLAST of MC03g_new0131 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description

InterPro

Analysis Name: InterPro Annotations of Bitter gourd (Dali-11) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 87..115
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 87..108
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..31
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..22

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
MC03g_new0131.1	MC03g_new0131.1	mRNA