MC03g_new0090 (gene) Bitter gourd (Dali-11) v1

Overview
NameMC03g_new0090
Typegene
OrganismMomordica charantia cv. Dali-11 (Bitter gourd (Dali-11) v1)
DescriptionUnknown protein
LocationMC03: 4235039 .. 4238260 (+)
RNA-Seq ExpressionMC03g_new0090
SyntenyMC03g_new0090
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGACAAAACGCTCGCGCTTCCCTTTCAGGACAGTGCCGCGGCACTGCCTTCTCGGCCCTTCTGGCTTGCCGGGCCCCACTTCACCTGTTTTCCATTCCTTATTCGTCCGAACTCATCCCTACAAAGACTTAGTTCTAACTGCCGGGTCAACAAACTGATCTACACTGCTCGGCCTCCCCAAGCTCTATCTGATTCTGCTCCGAGACTGGACAAGTTTACATGGTCTTGTCCCAATACTTAGAGACATAGCCACGTACTACCACTTGATCTAAGTGGTTCCCGCTGCTTCTTTCTTCAATCGAACCCACTAACCTCTGAAAGAAGATTTCCTCTCTACATTAGGCTGGGTACTCCCACCCAAGTATGTCGCCACACTAGAAATAGAGCTCTTACCCTTTAATGCACTAATTCGCTTATGCAACTTCACCAACTCGCCTGAAGACAGCTGAGGTATGAACTCGATGGGCTATGAAATTCTCATTTCCCTTTTCTGTACTTTCCAGTTGTTTAACTTGAGCTAATGACAGATTGTTTAGATCTTTTTCGGCCATCAATGTTATTAATCGTCTAAGGTCTCGCCCTGAACCATCTGTAGCTATTTTGTGCATTCTTTGTCTTAGTGAACCCTTGGCAACCCCAAACTCTGACACATAAATAGAAGATCTCTTGTGGTCTGTCGCCACTATCTTGGATTCCCTCTTGAGCTTCCAGCAACCCTCAACAAACTCACTGTTGTAGCGATCATCGTCTAGCTTCCTTGCAAATAATAAATTCAATATGAATCTAGGAATATACCTGACATCTCGCAACACCAACTCGGCCCCTTCAATTGTCTTCAAACAAACATCTTCAATTCCTTTCACCTTGGAGACACTCACATTCCACATTCTTACTAAGCCATAATCATCTACAGCAAAAGATGAGAACCAACATCTGTCTAAAGTAACATGTGCTGATGTTGTAGTGTCCACTACCCACTTTAATGAATGTTCTACATAAGTGTTCCTCTAAACGCAAGCTAGAAACTCTTCAATTCGTTCTTCTTCTGTTAAATCATTTATGGTGTTGTTCCCCTTCTCAAACTATTCTTTGAACTTCCTGCAAAAATGTTTAATGTGTCCCTTGTTGTGGTAGAATAACATTCAACTTCCCTGCTGGAACTCCCACTAGCCGTATTATTTCTCTACTGCTGCTTCTCTGTGTAATTCATGTTGGCCTTCCCCTTGTTCTGAACTACCATAGTTGATTAAATTCCATTTTCTTCCCCTGAAGTAGATGCAGACGTTTTTGCCAATTTTCGTTAGGTTTCCTCGGATAATGCAGCATTACAAATAGTTGCAAATTTCATACTACTATCCCTCAACGAATTCGACACCGCGGTTTTCATCGTCTCCCAAATGTCAGGCAAAGATGTCAGCAGCCTCATAGCCATCACTTCCTCATCGATCTTGATACTCATCCCTTCCAGTTTGTTCAACATGTCAGTGAGCCCATTAATGTGGGAATTCACCGAGGTTTCCTCCTCCATGTGGATATTGAAATACTTCGTCCAGAGAAGTATTTTGGTGTTGGCAGAAGGTTTCTCATACCTGTCTTGCAAGATCTTCATCAGTTCTTTCGTTGTTGTCTCTTTCGCCACGATGCTAGATACACCCATAGATAAGGAAAATTGACTCAAATTACCTAAAAAGTTCACTTTGCTCAAATGACCTCAATTATAAAACTTGACTCAAATGGCCCAATTTTAACTTTTCTGACTTTCAGAGAGGATGTAATGACAAATATAGCCTTGAATTAATTAAACAACAACGAATCTTGCACGGATCACGCATGTTGGTGTCATTAAAACCCCGGGAGAGGTCGATTTGATTTACAGCCGTGAATTAATTACAGTATCACCAACTTATTAATTCCCCACCAAATTTTTGTACTATTATTACCCACACATTCGCACTAATTGCAGAGAATAAAAGTTTGTTTCAGTCTTTATTGTCCTCGTGCACATCTTTCACGTTTTTGTCAAGAACTTCCACACTTTTTCCAATATTTTTCACATCTTGAACACCTTAAAGGAAGCCATTTGATCATCTATGAAATCTTGAACGAGGTTAGTTTTTGATTTGTTAATAATATTGTTTTCGATTCGTTCATAACATGATGTATATAGTTGGAGTCCAAAGTGAATGTGATGTCTGAACTTTTATGAGTATTTTTTATGGTCAATAGTTCCCTAAGTCCATGACACTCGGTCGTGTTTCTTCGTCTCACGGTCGTGGTTCGTGTTTGTTTGATTCTTGGTCGTGGTTGTAGGTTCCCACGGCCGTGGTCAGTTGTTGTTTAATTCTCGATCGTGGTTGTGGGTTCCTATGGCCGTGGTTGTATACCTATATATTTTCAGGCGTGTCTTAACTATCACGGTCATGGTGTGCAACATTGATTACTAATTACTTGTTTGTTGTTATTATTATCCATGCAGAATGCATTGACTATTTGTGATCTATGGTGGCAAGTGGAACGAGGCTAGTATGGTTTACGAAGGTGTGGTTATTGGTGGGCTAGATGTCAATTAAACGATAATATATGTTAACCTAGTAAGTGCTTTACACATGCTTACTAGAATTGATGCTGACCAATTTGATCTTATTATACACTGTGTATATAGATTTGATTTTTAGTACGAAGTCCCGAACTATCTGATATTTGATGATACCAGTTTGAGATTCTATTTGAATGGTCCTCCCGCTCCATCACAAGTACCATTGTACATAACCGTTCTACCTAAAACATCATATGGTAGTGGGAGCAATAGAGGAAATATTTTTTTAGAAACCCATACATATCTTCATTCCTATACTACCCAGGATAGAATTATCCATGTTTCGACCCTTCTATTTCTATTCACTCTCCTTTAGAGGATGTCTGTCCCCCCTCGTTTGTCCCACAGTTTACACCATTGACCGACAATGTTATCCCATGTAACCTAGGCGACGACAAATCTTCATTTTATGGTCAATTGTATGAGAATAAGGTTGAGTACGAGCTTCAGAGCGATGATGATTATGATTATGATGAATATCATACTGAGGACGGGGTTGAGGATGAGGATAATGAAGCAGAATTAAGAAAGATGGTGGGAATGGGTATGACAATGGGTACGAGGATGTCCTTGAAGACCATTATGAGAATGAAGGTCAACCTGTTCATGAGTCGCATACAATGA

mRNA sequence

ATGGACAAAACGCTCGCGCTTCCCTTTCAGGACAGTGCCGCGGCACTGCCTTCTCGGCCCTTCTGGCTTGCCGGGCCCCACTTCACCTGCGACGACAAATCTTCATTTTATGGTCAATTGTATGAGAATAAGGTTGAGTACGAGCTTCAGAGCGATGATGATTATGATTATGATGAATATCATACTGAGGACGGGGTTGAGGATGAGGATAATGAAGCAGAATTAAGAAAGATGGTGGGAATGGGTATGACAATGGGTACGAGGATGTCCTTGAAGACCATTATGAGAATGAAGGTCAACCTGTTCATGAGTCGCATACAATGA

Coding sequence (CDS)

ATGGACAAAACGCTCGCGCTTCCCTTTCAGGACAGTGCCGCGGCACTGCCTTCTCGGCCCTTCTGGCTTGCCGGGCCCCACTTCACCTGCGACGACAAATCTTCATTTTATGGTCAATTGTATGAGAATAAGGTTGAGTACGAGCTTCAGAGCGATGATGATTATGATTATGATGAATATCATACTGAGGACGGGGTTGAGGATGAGGATAATGAAGCAGAATTAAGAAAGATGGTGGGAATGGGTATGACAATGGGTACGAGGATGTCCTTGAAGACCATTATGAGAATGAAGGTCAACCTGTTCATGAGTCGCATACAATGA

Protein sequence

MDKTLALPFQDSAAALPSRPFWLAGPHFTCDDKSSFYGQLYENKVEYELQSDDDYDYDEYHTEDGVEDEDNEAELRKMVGMGMTMGTRMSLKTIMRMKVNLFMSRIQ
Homology
[Close]
BLAST of MC03g_new0090 vs. NCBI nr
Match: XP_022156834.1 (uncharacterized protein LOC111023667 [Momordica charantia])

HSP 1 Score: 63.9 bits (154), Expect = 3.78e-09
Identity = 29/37 (78.38%), Postives = 34/37 (91.89%), Query Frame = 0 

Query: 31  DDKSSFYGQLYENKVEYELQSDDDYDYDEYHTEDGVE 67
           DD+S +YGQLYEN+VEY+ QSDD+YDYDEY TEDGVE
Sbjct: 191 DDESPYYGQLYENEVEYKFQSDDEYDYDEYRTEDGVE 227

[Close]
BLAST of MC03g_new0090 vs. NCBI nr
Match: XP_022156802.1 (uncharacterized protein LOC111023635 [Momordica charantia])

HSP 1 Score: 58.9 bits (141), Expect = 2.14e-07
Identity = 28/39 (71.79%), Postives = 32/39 (82.05%), Query Frame = 0 

Query: 31  DDKSSFYGQLYENKVEYELQSDDDYDYDEYHTEDGVEDE 69
           D+     GQLYEN+VEYE QSDD+YDYDEY TEDGVED+
Sbjct: 82  DENDDGNGQLYENEVEYEFQSDDEYDYDEYRTEDGVEDD 120

[Close]
BLAST of MC03g_new0090 vs. ExPASy TrEMBL
Match: A0A6J1DUS4 (uncharacterized protein LOC111023667 OS=Momordica charantia OX=3673 GN=LOC111023667 PE=4 SV=1)

HSP 1 Score: 63.9 bits (154), Expect = 1.83e-09
Identity = 29/37 (78.38%), Postives = 34/37 (91.89%), Query Frame = 0 

Query: 31  DDKSSFYGQLYENKVEYELQSDDDYDYDEYHTEDGVE 67
           DD+S +YGQLYEN+VEY+ QSDD+YDYDEY TEDGVE
Sbjct: 191 DDESPYYGQLYENEVEYKFQSDDEYDYDEYRTEDGVE 227

[Close]
BLAST of MC03g_new0090 vs. ExPASy TrEMBL
Match: A0A6J1DSY0 (uncharacterized protein LOC111023635 OS=Momordica charantia OX=3673 GN=LOC111023635 PE=4 SV=1)

HSP 1 Score: 58.9 bits (141), Expect = 1.04e-07
Identity = 28/39 (71.79%), Postives = 32/39 (82.05%), Query Frame = 0 

Query: 31  DDKSSFYGQLYENKVEYELQSDDDYDYDEYHTEDGVEDE 69
           D+     GQLYEN+VEYE QSDD+YDYDEY TEDGVED+
Sbjct: 82  DENDDGNGQLYENEVEYEFQSDDEYDYDEYRTEDGVEDD 120

The following BLAST results are available for this feature:
BLAST of MC03g_new0090 vs.
Match NameE-valueIdentityDescription
BLAST of MC03g_new0090 vs. NCBI nr
Match NameE-valueIdentityDescription
XP_022156834.13.78e-0978.38uncharacterized protein LOC111023667 [Momordica charantia][more]
XP_022156802.12.14e-0771.79uncharacterized protein LOC111023635 [Momordica charantia][more]
BLAST of MC03g_new0090 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
A0A6J1DUS41.83e-0978.38uncharacterized protein LOC111023667 OS=Momordica charantia OX=3673 GN=LOC111023... [more]
A0A6J1DSY01.04e-0771.79uncharacterized protein LOC111023635 OS=Momordica charantia OX=3673 GN=LOC111023... [more]
BLAST of MC03g_new0090 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
MC03g_new0090.1MC03g_new0090.1mRNA