MC03g_new0069 (gene) Bitter gourd (Dali-11) v1

Overview
NameMC03g_new0069
Typegene
OrganismMomordica charantia cv. Dali-11 (Bitter gourd (Dali-11) v1)
DescriptionUnknown protein
LocationMC03: 3573389 .. 3573625 (-)
RNA-Seq ExpressionMC03g_new0069
SyntenyMC03g_new0069
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGCCCAACTTTCCAACTCCAAATTCCTGGCTGAGGAGTTTAAGAAGATCCAGGACTATGTCGATCTGCAGAATGCTGCCATGGAATGTGGCGGCTCTTGGTCTCTCCGTTAGGTCTCTAATGAACACCCTGACATCGATTACTCCTTCCTCCAGGAACGTTTTAGGGCTGAATGTGACGCCCCTGATGATATGGATGACGACGAGTAGGGACGATGTGGGTCAAGTTGTCTGTTGA

mRNA sequence

ATGCCCAACTTTCCAACTCCAAATTCCTGGCTGAGGAGTTTAAGAAGATCCAGGACTATGTCGATCTGCAGAATGCTGCCATGGAATGTGGCGGCTCTTGGTCTCTCCGTTAGGTCTCTAATGAACACCCTGACATCGATTACTCCTTCCTCCAGGAACGTTTTAGGGCTGAATGTGACGCCCCTGATGATATGGATGACGACGAGTAGGGACGATGTGGGTCAAGTTGTCTGTTGA

Coding sequence (CDS)

ATGCCCAACTTTCCAACTCCAAATTCCTGGCTGAGGAGTTTAAGAAGATCCAGGACTATGTCGATCTGCAGAATGCTGCCATGGAATGTGGCGGCTCTTGGTCTCTCCGTTAGGTCTCTAATGAACACCCTGACATCGATTACTCCTTCCTCCAGGAACGTTTTAGGGCTGAATGTGACGCCCCTGATGATATGGATGACGACGAGTAGGGACGATGTGGGTCAAGTTGTCTGTTGA

Protein sequence

MPNFPTPNSWLRSLRRSRTMSICRMLPWNVAALGLSVRSLMNTLTSITPSSRNVLGLNVTPLMIWMTTSRDDVGQVVC
Homology
[Close]
BLAST of MC03g_new0069 vs. NCBI nr
Match: XP_022150031.1 (uncharacterized protein LOC111018304 [Momordica charantia])

HSP 1 Score: 76.3 bits (186), Expect = 1.53e-14
Identity = 42/65 (64.62%), Postives = 50/65 (76.92%), Query Frame = 0 

Query: 15  RRSRTMSICRMLPWNVAALGLSVRSLMNTLTSITPSSRNVLGLNVTPLMIWMT--TSRDD 74
           ++++TMSICRM PWNVA+ GLS +S   T TSIT  SR+VLGLNVTP M W T  TSRD+
Sbjct: 174 KKTQTMSICRMPPWNVASHGLSAKSPTITPTSITRFSRSVLGLNVTPPMTWTTRTTSRDN 233

Query: 75  VGQVV 77
           VG VV
Sbjct: 234 VGLVV 238

[Close]
BLAST of MC03g_new0069 vs. ExPASy TrEMBL
Match: A0A6J1DA80 (uncharacterized protein LOC111018304 OS=Momordica charantia OX=3673 GN=LOC111018304 PE=4 SV=1)

HSP 1 Score: 76.3 bits (186), Expect = 7.41e-15
Identity = 42/65 (64.62%), Postives = 50/65 (76.92%), Query Frame = 0 

Query: 15  RRSRTMSICRMLPWNVAALGLSVRSLMNTLTSITPSSRNVLGLNVTPLMIWMT--TSRDD 74
           ++++TMSICRM PWNVA+ GLS +S   T TSIT  SR+VLGLNVTP M W T  TSRD+
Sbjct: 174 KKTQTMSICRMPPWNVASHGLSAKSPTITPTSITRFSRSVLGLNVTPPMTWTTRTTSRDN 233

Query: 75  VGQVV 77
           VG VV
Sbjct: 234 VGLVV 238

The following BLAST results are available for this feature:
BLAST of MC03g_new0069 vs.
Match NameE-valueIdentityDescription
BLAST of MC03g_new0069 vs. NCBI nr
Match NameE-valueIdentityDescription
XP_022150031.11.53e-1464.62uncharacterized protein LOC111018304 [Momordica charantia][more]
BLAST of MC03g_new0069 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
A0A6J1DA807.41e-1564.62uncharacterized protein LOC111018304 OS=Momordica charantia OX=3673 GN=LOC111018... [more]
BLAST of MC03g_new0069 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
MC03g_new0069.1MC03g_new0069.1mRNA