MC03g_new0035 (gene) Bitter gourd (Dali-11) v1

Overview


Name	MC03g_new0035
Type	gene
Organism	Momordica charantia cv. Dali-11 (Bitter gourd (Dali-11) v1)
Description	Plus3 domain-containing protein
Location	MC03: 1905965 .. 1907090 (-)
RNA-Seq Expression	MC03g_new0035
Synteny	MC03g_new0035

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

CATGGCACCCTTGTCGCAGTGAGTGATCTTATCTTCACGGGACACGAGAAAGTGAAAGTGTATGTCAATTTTCCTTTTCCTTGCAAGACCCGATGCAGCCTGTCATGCAACTGTCACATCTACAGTAGACCCATGCTTTGAAATCTCGAGGTGTTGGGCGCCGAGCCGAGATGTCACAAGTGTGTTGGGTACCGTGCCAAGTAGTCACAAGGGTGTTGGGTACCGAGCCGAGTAGTCACAAGAGTGTTGGGCCTTGTGCCGAGCACCCTTTGGCCCGCTGGGTAAAGACCTCTGGACCGAGAACTGTGCTATGAGTTGAGGGCTATTTAAACCCCTCCATCCTCATCAATTCTTGCCAACCTCCCAACAAGGTATTCATTTCTCTGCCCTGTTCTTTGTCGTATTTTCTTTTTATATGGCCGGCCTTGATTTCGAGTGGACTTCCTCGGATGATGGGTCATCATCGCATCCTTCGTCAGAGTCTCAGTCTTATCGTCCATTTTGGATGGATAACTCCAGTCTTACGGCGAAGGACCTGCGCCGCTTGCGTTCGAAATACCGTATCCCGGATTCGGTTAGCCTTCGTCTTCCGAACCCGGGAGAGAGTATTGACGGTTCTTATCCCGGTGAAGTAGTATTTTATGCTGCGATGTTCCAATTTGGAGTTCGCCTACCATTGCCTCTTTTCCTTCAAAACTTTTTAGCTTTTAATCAAATAGCTCCTTCCCAAATCGTCCCGAACGGGTGGTCTACTTTGATTAGCTGCTTTATTTTGTGGTCACACCTCGGGGGCGAGCAGCCTCTAACCGCCGCGGATTTTATGTCGCTTTATTATCTCAAACACAGCCCCGAGGATAACTTTCATTTTTATGTTAGTTCCCGGAACCAAATTCTGGTTATGGGTCCCTCCTCAGTGAAGCATTGGAAAAATGAATGGTTCTTTGTTGGCGGTGACTGGCTGGCCCATGATGAGAGAGGGTTGTATTTTCCTGTCCCGACCGAGTGTAGGGAGTTGGGTAAGTAGCTTCCGAACTCCGCCGGGACTTTCGCAAACGTCAATTCTGATATTCCTTTTTGTTGGCAGTTTCCCGCAACTGTGAGCTCACCGCCGAGACAACCACTTTCT

mRNA sequence

ATGGCCGGCCTTGATTTCGAGTGGACTTCCTCGGATGATGGGTCATCATCGCATCCTTCGTCAGAGTCTCAGTCTTATCGTCCATTTTGGATGGATAACTCCAGTCTTACGGCGAAGGACCTGCGCCGCTTGCGTTCGAAATACCGTATCCCGGATTCGGTTAGCCTTCGTCTTCCGAACCCGGGAGAGAGTATTGACGGTTCTTATCCCGGTGAAGTAGTATTTTATGCTGCGATGTTCCAATTTGGAGTTCGCCTACCATTGCCTCTTTTCCTTCAAAACTTTTTAGCTTTTAATCAAATAGCTCCTTCCCAAATCGTCCCGAACGGGTGGTCTACTTTGATTAGCTGCTTTATTTTGTGGTCACACCTCGGGGGCGAGCAGCCTCTAACCGCCGCGGATTTTATGTCGCTTTATTATCTCAAACACAGCCCCGAGGATAACTTTCATTTTTATGTTAGTTCCCGGAACCAAATTCTGGTTATGGGTCCCTCCTCAGTGAAGCATTGGAAAAATGAATGGTTCTTTGTTGGCGGTGACTGGCTGGCCCATGATGAGAGAGGGTTGTATTTTCCTGTCCCGACCGAGTGTAGGGAGTTGGGTAAGTAG

Coding sequence (CDS)

ATGGCCGGCCTTGATTTCGAGTGGACTTCCTCGGATGATGGGTCATCATCGCATCCTTCGTCAGAGTCTCAGTCTTATCGTCCATTTTGGATGGATAACTCCAGTCTTACGGCGAAGGACCTGCGCCGCTTGCGTTCGAAATACCGTATCCCGGATTCGGTTAGCCTTCGTCTTCCGAACCCGGGAGAGAGTATTGACGGTTCTTATCCCGGTGAAGTAGTATTTTATGCTGCGATGTTCCAATTTGGAGTTCGCCTACCATTGCCTCTTTTCCTTCAAAACTTTTTAGCTTTTAATCAAATAGCTCCTTCCCAAATCGTCCCGAACGGGTGGTCTACTTTGATTAGCTGCTTTATTTTGTGGTCACACCTCGGGGGCGAGCAGCCTCTAACCGCCGCGGATTTTATGTCGCTTTATTATCTCAAACACAGCCCCGAGGATAACTTTCATTTTTATGTTAGTTCCCGGAACCAAATTCTGGTTATGGGTCCCTCCTCAGTGAAGCATTGGAAAAATGAATGGTTCTTTGTTGGCGGTGACTGGCTGGCCCATGATGAGAGAGGGTTGTATTTTCCTGTCCCGACCGAGTGTAGGGAGTTGGGTAAGTAG

Protein sequence

MAGLDFEWTSSDDGSSSHPSSESQSYRPFWMDNSSLTAKDLRRLRSKYRIPDSVSLRLPNPGESIDGSYPGEVVFYAAMFQFGVRLPLPLFLQNFLAFNQIAPSQIVPNGWSTLISCFILWSHLGGEQPLTAADFMSLYYLKHSPEDNFHFYVSSRNQILVMGPSSVKHWKNEWFFVGGDWLAHDERGLYFPVPTECRELGK

Homology

[Close]

BLAST of MC03g_new0035 vs. NCBI nr
Match: XP_022159063.1 (uncharacterized protein LOC111025502, partial [Momordica charantia])

HSP 1 Score: 112 bits (280), Expect = 1.11e-25
Identity = 61/167 (36.53%), Postives = 88/167 (52.69%), Query Frame = 0


Query: 41  LRRLRSKYRIPDSVSLRLPNPGESIDGSYPGEVVFYAAMFQFGVRLPLPLFLQNFLAFNQ 100
           L  LR  + IP+++ LRLP  GE  D    G V  Y  MF++G+RLPL  F+Q FL    
Sbjct: 56  LGSLRRGFAIPENILLRLPEEGERADNPPEGWVTLYFKMFEYGLRLPLHPFVQEFLFRTG 115

Query: 101 IAPSQIVPNGWSTLISCFIL-WSHLGGEQPLTAAD---FMSLYYLKHSPEDNFHFYVSSR 160
           +AP+Q+ PNGW  + +  IL W      +     D    ++ +  K   +    FY+ +R
Sbjct: 116 LAPAQVAPNGWGVIFALAILFWLRARDSEEAELXDVDQLLACFEAKRIAKKPGRFYMCAR 175

Query: 161 NQI--LVMGPSSVKHWKNEWFFVGGDWLAHDERGL-YFPVPTECREL 200
                +V GP+S+K W  +WF+  G+WLA DE G  +F VPT    L
Sbjct: 176 KGAGGIVKGPTSIKGWVRKWFYASGEWLAKDESGRSFFDVPTRFGNL 222

[Close]

BLAST of MC03g_new0035 vs. NCBI nr
Match: XP_024042842.1 (uncharacterized protein LOC112099649 [Citrus clementina])

HSP 1 Score: 107 bits (267), Expect = 1.88e-23
Identity = 56/145 (38.62%), Postives = 84/145 (57.93%), Query Frame = 0


Query: 40  DLRRLRSKYRIPDSVSLRLPNPGESIDGSYPGEVVFYAAMFQFGVRLPLPLFLQNFLAFN 99
           DL +LR+ Y IP+ V L +P  G+ +     G V+ +   F+ G RLPL  +    L   
Sbjct: 129 DLFKLRNLYNIPNDVLLVVPGKGDVLTRPPKGYVMMHLKSFKLGARLPLQSYFVRILGCM 188

Query: 100 QIAPSQIVPNGWSTLISCFILWSHLGGEQPLTAADFMSLYYLKHSPEDN--FHFYVSSRN 159
            +AP Q+ PNGW  L + F+LW   G E+P +  +   LY L+ SP++   ++F  SS  
Sbjct: 189 HLAPGQLHPNGWRVLSAMFVLWERCGSEEP-SLVEVKHLYQLRSSPKEAGWYYFMSSSAK 248

Query: 160 QILVMG-PSSVKHWKNEWFFVGGDW 181
           +  + G PSS K+WKN++FFVGG+W
Sbjct: 249 RKPITGFPSSCKNWKNKFFFVGGNW 272

[Close]

BLAST of MC03g_new0035 vs. NCBI nr
Match: GFZ17187.1 (hypothetical protein Acr_26g0004570 [Actinidia rufa])

HSP 1 Score: 108 bits (269), Expect = 2.03e-23
Identity = 57/156 (36.54%), Postives = 91/156 (58.33%), Query Frame = 0


Query: 36  LTAKDLRRLRSKYRIPDSVSLRLPNPGESIDGSYPGEVVFYAAMFQFGVRLPLPLFLQNF 95
           +T ++L  LR  Y  P  V +RLP+ GE+I  + PGEV FY A F  G+R P+   ++  
Sbjct: 1   MTLEELNALRDTYSFPSGVQIRLPDEGETITSTRPGEVAFYEAAFPAGLRFPVHNTIRLI 60

Query: 96  LAFNQIAPSQIVPNGWSTLISCFILWSHLGGEQPLTAADFMSLYYLKHSPE-DNFHFYVS 155
           L F  I P+Q+VPN W ++     LW        ++ ++F +L+ L  +P+ D    Y  
Sbjct: 61  LQFYNICPAQLVPNAWRSIACSMALWRVY--RYSISLSEFRNLFSLNSNPKPDQGWLYFK 120

Query: 156 SRNQILVMG--PSSVKHWKNEWFFVGGD-WLAHDER 187
           +RN+ +++G  PS+VK WK+++FFV GD W   +E+
Sbjct: 121 ARNKKVLLGGYPSNVKGWKSKFFFVSGDEWEIPEEK 154

[Close]

BLAST of MC03g_new0035 vs. NCBI nr
Match: GFS44259.1 (hypothetical protein Acr_00g0089410 [Actinidia rufa])

HSP 1 Score: 108 bits (270), Expect = 2.20e-23
Identity = 57/156 (36.54%), Postives = 91/156 (58.33%), Query Frame = 0


Query: 36  LTAKDLRRLRSKYRIPDSVSLRLPNPGESIDGSYPGEVVFYAAMFQFGVRLPLPLFLQNF 95
           +T ++L  LR  Y  P  V +RLP+ GE+I  + PGEV FY A F  G+R P+   ++  
Sbjct: 65  MTLEELNALRDTYSFPSGVQIRLPDEGETITSTRPGEVAFYEAAFPAGLRFPIHNTIRLI 124

Query: 96  LAFNQIAPSQIVPNGWSTLISCFILWSHLGGEQPLTAADFMSLYYLKHSPE-DNFHFYVS 155
           L F  I P+Q+VPN W ++     LW        ++ ++F +L+ L  +P+ D    Y  
Sbjct: 125 LQFYNICPAQLVPNAWRSIACSMALWRVY--RYSISLSEFRNLFSLNSNPKPDQGWLYFK 184

Query: 156 SRNQILVMG--PSSVKHWKNEWFFVGGD-WLAHDER 187
           +RN+ +++G  PS+VK WK+++FFV GD W   +E+
Sbjct: 185 ARNKKVLLGGYPSNVKGWKSKFFFVSGDEWEIPEEK 218

[Close]

BLAST of MC03g_new0035 vs. NCBI nr
Match: GFS37317.1 (hypothetical protein Acr_00g0051360 [Actinidia rufa])

HSP 1 Score: 107 bits (268), Expect = 3.69e-23
Identity = 55/145 (37.93%), Postives = 87/145 (60.00%), Query Frame = 0


Query: 39  KDLRRLRSKYRIPDSVSLRLPNPGESIDGSYPGEVVFYAAMFQFGVRLPLPLFLQNFLAF 98
           ++L  LR  Y  P  V +RLP+ GE+I  + PGEV FY A F  G+R PL   ++  L F
Sbjct: 39  EELNALRDTYSFPSRVQIRLPDEGETITSTRPGEVAFYEAAFPVGLRFPLHPTIRLILQF 98

Query: 99  NQIAPSQIVPNGWSTLISCFILWSHLGGEQPLTAADFMSLYYLKHSPE-DNFHFYVSSRN 158
             I P+Q+VPN W +++    LW     +  ++ ++F +L+ L  +P+ D    Y  +RN
Sbjct: 99  YNICPAQLVPNAWRSIVCSMALWRVY--KYSISLSEFRNLFSLNSNPKLDQGWLYFKARN 158

Query: 159 QILVMG--PSSVKHWKNEWFFVGGD 180
           + +++G  PS+VK WK+++FFV GD
Sbjct: 159 KKVLLGGYPSNVKGWKSKFFFVSGD 181

[Close]

BLAST of MC03g_new0035 vs. ExPASy TrEMBL
Match: A0A6J1DXS5 (uncharacterized protein LOC111025502 OS=Momordica charantia OX=3673 GN=LOC111025502 PE=4 SV=1)

HSP 1 Score: 112 bits (280), Expect = 5.36e-26
Identity = 61/167 (36.53%), Postives = 88/167 (52.69%), Query Frame = 0


Query: 41  LRRLRSKYRIPDSVSLRLPNPGESIDGSYPGEVVFYAAMFQFGVRLPLPLFLQNFLAFNQ 100
           L  LR  + IP+++ LRLP  GE  D    G V  Y  MF++G+RLPL  F+Q FL    
Sbjct: 56  LGSLRRGFAIPENILLRLPEEGERADNPPEGWVTLYFKMFEYGLRLPLHPFVQEFLFRTG 115

Query: 101 IAPSQIVPNGWSTLISCFIL-WSHLGGEQPLTAAD---FMSLYYLKHSPEDNFHFYVSSR 160
           +AP+Q+ PNGW  + +  IL W      +     D    ++ +  K   +    FY+ +R
Sbjct: 116 LAPAQVAPNGWGVIFALAILFWLRARDSEEAELXDVDQLLACFEAKRIAKKPGRFYMCAR 175

Query: 161 NQI--LVMGPSSVKHWKNEWFFVGGDWLAHDERGL-YFPVPTECREL 200
                +V GP+S+K W  +WF+  G+WLA DE G  +F VPT    L
Sbjct: 176 KGAGGIVKGPTSIKGWVRKWFYASGEWLAKDESGRSFFDVPTRFGNL 222

[Close]

BLAST of MC03g_new0035 vs. ExPASy TrEMBL
Match: A0A7J0H272 (Uncharacterized protein OS=Actinidia rufa OX=165716 GN=Acr_26g0004570 PE=4 SV=1)

HSP 1 Score: 108 bits (269), Expect = 9.82e-24
Identity = 57/156 (36.54%), Postives = 91/156 (58.33%), Query Frame = 0


Query: 36  LTAKDLRRLRSKYRIPDSVSLRLPNPGESIDGSYPGEVVFYAAMFQFGVRLPLPLFLQNF 95
           +T ++L  LR  Y  P  V +RLP+ GE+I  + PGEV FY A F  G+R P+   ++  
Sbjct: 1   MTLEELNALRDTYSFPSGVQIRLPDEGETITSTRPGEVAFYEAAFPAGLRFPVHNTIRLI 60

Query: 96  LAFNQIAPSQIVPNGWSTLISCFILWSHLGGEQPLTAADFMSLYYLKHSPE-DNFHFYVS 155
           L F  I P+Q+VPN W ++     LW        ++ ++F +L+ L  +P+ D    Y  
Sbjct: 61  LQFYNICPAQLVPNAWRSIACSMALWRVY--RYSISLSEFRNLFSLNSNPKPDQGWLYFK 120

Query: 156 SRNQILVMG--PSSVKHWKNEWFFVGGD-WLAHDER 187
           +RN+ +++G  PS+VK WK+++FFV GD W   +E+
Sbjct: 121 ARNKKVLLGGYPSNVKGWKSKFFFVSGDEWEIPEEK 154

[Close]

BLAST of MC03g_new0035 vs. ExPASy TrEMBL
Match: A0A7J0DXU6 (Uncharacterized protein OS=Actinidia rufa OX=165716 GN=Acr_00g0089410 PE=4 SV=1)

HSP 1 Score: 108 bits (270), Expect = 1.07e-23
Identity = 57/156 (36.54%), Postives = 91/156 (58.33%), Query Frame = 0


Query: 36  LTAKDLRRLRSKYRIPDSVSLRLPNPGESIDGSYPGEVVFYAAMFQFGVRLPLPLFLQNF 95
           +T ++L  LR  Y  P  V +RLP+ GE+I  + PGEV FY A F  G+R P+   ++  
Sbjct: 65  MTLEELNALRDTYSFPSGVQIRLPDEGETITSTRPGEVAFYEAAFPAGLRFPIHNTIRLI 124

Query: 96  LAFNQIAPSQIVPNGWSTLISCFILWSHLGGEQPLTAADFMSLYYLKHSPE-DNFHFYVS 155
           L F  I P+Q+VPN W ++     LW        ++ ++F +L+ L  +P+ D    Y  
Sbjct: 125 LQFYNICPAQLVPNAWRSIACSMALWRVY--RYSISLSEFRNLFSLNSNPKPDQGWLYFK 184

Query: 156 SRNQILVMG--PSSVKHWKNEWFFVGGD-WLAHDER 187
           +RN+ +++G  PS+VK WK+++FFV GD W   +E+
Sbjct: 185 ARNKKVLLGGYPSNVKGWKSKFFFVSGDEWEIPEEK 218

[Close]

BLAST of MC03g_new0035 vs. ExPASy TrEMBL
Match: A0A7J0DL20 (Uncharacterized protein OS=Actinidia rufa OX=165716 GN=Acr_00g0051360 PE=4 SV=1)

HSP 1 Score: 107 bits (268), Expect = 1.79e-23
Identity = 55/145 (37.93%), Postives = 87/145 (60.00%), Query Frame = 0


Query: 39  KDLRRLRSKYRIPDSVSLRLPNPGESIDGSYPGEVVFYAAMFQFGVRLPLPLFLQNFLAF 98
           ++L  LR  Y  P  V +RLP+ GE+I  + PGEV FY A F  G+R PL   ++  L F
Sbjct: 39  EELNALRDTYSFPSRVQIRLPDEGETITSTRPGEVAFYEAAFPVGLRFPLHPTIRLILQF 98

Query: 99  NQIAPSQIVPNGWSTLISCFILWSHLGGEQPLTAADFMSLYYLKHSPE-DNFHFYVSSRN 158
             I P+Q+VPN W +++    LW     +  ++ ++F +L+ L  +P+ D    Y  +RN
Sbjct: 99  YNICPAQLVPNAWRSIVCSMALWRVY--KYSISLSEFRNLFSLNSNPKLDQGWLYFKARN 158

Query: 159 QILVMG--PSSVKHWKNEWFFVGGD 180
           + +++G  PS+VK WK+++FFV GD
Sbjct: 159 KKVLLGGYPSNVKGWKSKFFFVSGD 181

[Close]

BLAST of MC03g_new0035 vs. ExPASy TrEMBL
Match: A0A7J0G0T0 (Uncharacterized protein OS=Actinidia rufa OX=165716 GN=Acr_17g0000260 PE=4 SV=1)

HSP 1 Score: 107 bits (268), Expect = 1.94e-23
Identity = 58/148 (39.19%), Postives = 87/148 (58.78%), Query Frame = 0


Query: 36  LTAKDLRRLRSKYRIPDSVSLRLPNPGESIDGSYPGEVVFYAAMFQFGVRLPLPLFLQNF 95
           +T ++L  LR  Y  P  V  RLP+ GE+I  + PGEV FY A F  G+R PL   ++  
Sbjct: 66  MTIEELNALRETYSFPPEVRARLPDEGETITSTRPGEVAFYEAAFPAGLRFPLHNTIRLI 125

Query: 96  LAFNQIAPSQIVPNGWSTLISCFILWSHLGGEQPLTAADFMSLYYLKHSPE-DNFHFYVS 155
           L F  I P+Q+VPN W ++     LW     +  L+ ++F SL+ L  +P+ D    Y  
Sbjct: 126 LQFYNICPAQLVPNAWRSITCSMALWRVY--KYSLSLSEFRSLFSLSCNPKPDQGWLYFK 185

Query: 156 SRNQILVMG--PSSVKHWKNEWFFVGGD 180
           +RN+ +++G  PS+VK WK+++FFV GD
Sbjct: 186 ARNKKVLLGGYPSNVKGWKSKFFFVSGD 211

The following BLAST results are available for this feature:

BLAST of MC03g_new0035 vs.


Match Name	E-value	Identity	Description

BLAST of MC03g_new0035 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022159063.1	1.11e-25	36.53	uncharacterized protein LOC111025502, partial [Momordica charantia]	[more]
XP_024042842.1	1.88e-23	38.62	uncharacterized protein LOC112099649 [Citrus clementina]	[more]
GFZ17187.1	2.03e-23	36.54	hypothetical protein Acr_26g0004570 [Actinidia rufa]	[more]
GFS44259.1	2.20e-23	36.54	hypothetical protein Acr_00g0089410 [Actinidia rufa]	[more]
GFS37317.1	3.69e-23	37.93	hypothetical protein Acr_00g0051360 [Actinidia rufa]	[more]

BLAST of MC03g_new0035 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1DXS5	5.36e-26	36.53	uncharacterized protein LOC111025502 OS=Momordica charantia OX=3673 GN=LOC111025...	[more]
A0A7J0H272	9.82e-24	36.54	Uncharacterized protein OS=Actinidia rufa OX=165716 GN=Acr_26g0004570 PE=4 SV=1	[more]
A0A7J0DXU6	1.07e-23	36.54	Uncharacterized protein OS=Actinidia rufa OX=165716 GN=Acr_00g0089410 PE=4 SV=1	[more]
A0A7J0DL20	1.79e-23	37.93	Uncharacterized protein OS=Actinidia rufa OX=165716 GN=Acr_00g0051360 PE=4 SV=1	[more]
A0A7J0G0T0	1.94e-23	39.19	Uncharacterized protein OS=Actinidia rufa OX=165716 GN=Acr_17g0000260 PE=4 SV=1	[more]

BLAST of MC03g_new0035 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description

InterPro

Analysis Name: InterPro Annotations of Bitter gourd (Dali-11) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	PFAM	PF04195	Transposase_28	coord: 73..141 e-value: 7.1E-9 score: 35.8
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..25
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 9..25
None	No IPR available	PANTHER	PTHR31099:SF14	OS06G0165300 PROTEIN	coord: 13..177
None	No IPR available	PANTHER	PTHR31099	OS06G0165300 PROTEIN	coord: 13..177

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
MC03g_new0035.1	MC03g_new0035.1	mRNA