MC03g_new0012 (gene) Bitter gourd (Dali-11) v1

Overview


Name	MC03g_new0012
Type	gene
Organism	Momordica charantia cv. Dali-11 (Bitter gourd (Dali-11) v1)
Description	Protein DOUBLE-STRAND BREAK FORMATION
Location	MC03: 714952 .. 717560 (-)
RNA-Seq Expression	MC03g_new0012
Synteny	MC03g_new0012

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGAAGTCTTCTAATCAGAAATGGCTTCAAGTTTCACACGTGGAATGGTTAAACTTCGCTGAGCATTCAATGCATTCTGGCTTTATTTCTATTGCCATTAAGGTAAGATAATATCTTCTGTTTATGTGAACTGCTTTAAGATTTTCTTTAGCTCGTTAGTAGAGGTGCCTCGCGTCCAATAGAAGTTCTATAGTATGTGCGTTGTACCAATTTATGTAGCGAGATGTGTGGCTCCATTAAATCCATAATGAGATATGAAGTGAGATTTCTGCTCTTCAATGCTTAGTCAAAATGTATAGGTTTTTTGGGAACTAAGAATTGGGCACTGCAATTTTGACGTTGTCACTTGTCAGTATGGTGGTGCTATGAATGTTAGTTCTCAGAGAAGAGCTCTGAGTAGAGAATTCTTAAATAGGAAAAAATAGCTCAGAATAAATAGTAATATTGAGGCTAAGTTTCAAGAAAGAGAAAGAGAACGTCTTCAAACAAGACCTATGTAAGGGTCTAAAAGGTGGAAGCTATGTTAATAGCACATGATCGAATACAGTAACTGACCTTAGGTGCCTAAATAAACAATATCAGAAGGAAAAATGATTCATGGCAATACAAAAAATCCTATTTCTTAACATTCCCCTGGAATGAGCTTGGTTTGTAAGTTGAGAAAAAGATGGGTAGAGAGAATCTCCGTCAGAATGTTAGTAAGTTGGTCTTCGAAAGGTTTGAATTGAAGAACAAGCTGCTTACTAATAACATGCTCATGAACAAAATGATAGTGGATCTTAATATGTTGGCAATAAGCACTAAAGTTATACAAAGTAAGATCGATGGTGAAAAGGAGAAAAACCTAACTCACGTTGCACGTCTTCTACTTCTACCTATTAGTGTAACAACATTGGTAAGTCTATGGTACTCCCTTAGACTCAACACACGAATGTGATAATATTTCTGTTTGGAGGAGCACTGGCTAGGGGATAATTTTAGGACAAGAAAAGTGCAATAGCTGCTGTAATCTTTCAACCATGTGAATAGCATGTGGTCCAAGTAAGCTACCTCAGGCTCCTCAAAATAAAACATTAGGTGTGCAGAAGGAGAAAATGATGCACTTAATATTACAACAAAATCCAATTTCTTAAAAATAAACTACCAGAACTTTTCTTGTCCGTAAATGTTGTGTGTTACTGAAATTACATGTTTTTCACTTCAGCTTGGATTATTTTCTTGAATAAATTTCTTTGCATACACGTCAATGGATCATGCAATGCTTCAAAATGCTAGGTTTTTTGTTGTTTCACAGATTGGGCATTTTCATAGGATGGCAATCTTGGTTACCTTCTGCAAGTTTAGGAGTACATAGGATCAATTTGTTGAAACTCTCGCTTGCTTATTGTTTTCTGGTTTCTGCAAGTTCAATTTTGAATTATGATTGAGGCTTTTCCTCACATCGATTCTTGTGGATAGCATAGCAACACTATCTCTTACTGTTACCACAACTCTTTAAGTCATTTAGACGATAGAACATGGAAATGGCTATTCAAAGCCGCACTTCTACCCTTCTATCAGGTCAAGTTGGATTTGATCAAATTCCATCTAGATGCGTGACTCTGTTTTTCACAATAAAATACGAGTCCAAAGGCAGGGTAAGAAAGGGTTTAGCTAACGAATGTATACCTTTCAATTTTAATTTTTCACATAATTTTTCCATCTCGTATATTCTATTTCAGTTCTGAATTCTGCAGTATTTAGTTAGTTTTCTCCTTCAATACAGTGAACTCATGAAGATTCATTTAGAGTCTCCTCCGATATGGTGAACTTACGTGCAGTTTTCTTTACTAGGCATATGAGCTTGCGCTGTCACGCCTTCAGCAGAGTGATACTGAAAACTGCACATCACACAGTTTGTCTAAATGCGTGGAAGTTATCGAAAAGATAAATAGACTCAAAGATCATGCTCTGAAATCAGCTGCTTCCCATTCTGGTACCGACCTTTAGTTGAGTTAAAAGATTTAAAGATCAAACCAGTCACTAAAATTGACTGCATACTAGATGCGCCTAACTTGAATATAAACAAGACAAATCTTTTAAGTGTTCCCGTTTATTGGCTAAAGGCCCTATTTTGGTTAACAAATTCACTGTCATGAAAGCGGTTTCCCTTTTACTTACTTTCTAACCCCCTTTGTTGTATCTTAACCTAACATCCAACTCATTAATCAGAATACTAACCTCAAAAATCTTATTATGCAGCAGGAAAGGAAAGAAAACGAAATGAAACTATTATGCCTTTTGGTTCTAATGCATGGTTTTAGTAACTCAGTCTGACATTAATAATAATTTTTCAAAAAACAAAACCAGGGCTCCTTGCAACTGTCTGACCCATTGCAAATTTTTATCTGATTAAATCAGTTCAGGCTCTCACATCTGAGTATTTGAAAAAGAAAGTAACTGAGAGGAACAGAAAGGATTCTTCATTCTGCACAAGAACTCCGTTTACAGCAAGCACTCTATTCAGAAGTGGCATCAGAAACCATAATGCAAGAAAGCTGCAAGAATATCAGGGTTTGCCGGAGTTTCCTAGTGAATCGTACAATCTCCAGTTTGGTGACCGATCCTAA

mRNA sequence

ATGAAGTCTTCTAATCAGAAATGGCTTCAAGTTTCACACGTGGAATGGTTAAACTTCGCTGAGCATTCAATGCATTCTGGCTTTATTTCTATTGCCATTAAGGCATATGAGCTTGCGCTGTCACGCCTTCAGCAGAGTGATACTGAAAACTGCACATCACACAGTTTGTCTAAATGCGTGGAAGTTATCGAAAAGATAAATAGACTCAAAGATCATGCTCTGAAATCAGCTGCTTCCCATTCTGTTCAGGCTCTCACATCTGAGTATTTGAAAAAGAAAGTAACTGAGAGGAACAGAAAGGATTCTTCATTCTGCACAAGAACTCCGTTTACAGCAAGCACTCTATTCAGAAGTGGCATCAGAAACCATAATGCAAGAAAGCTGCAAGAATATCAGGGTTTGCCGGAGTTTCCTAGTGAATCGTACAATCTCCAGTTTGGTGACCGATCCTAA

Coding sequence (CDS)

ATGAAGTCTTCTAATCAGAAATGGCTTCAAGTTTCACACGTGGAATGGTTAAACTTCGCTGAGCATTCAATGCATTCTGGCTTTATTTCTATTGCCATTAAGGCATATGAGCTTGCGCTGTCACGCCTTCAGCAGAGTGATACTGAAAACTGCACATCACACAGTTTGTCTAAATGCGTGGAAGTTATCGAAAAGATAAATAGACTCAAAGATCATGCTCTGAAATCAGCTGCTTCCCATTCTGTTCAGGCTCTCACATCTGAGTATTTGAAAAAGAAAGTAACTGAGAGGAACAGAAAGGATTCTTCATTCTGCACAAGAACTCCGTTTACAGCAAGCACTCTATTCAGAAGTGGCATCAGAAACCATAATGCAAGAAAGCTGCAAGAATATCAGGGTTTGCCGGAGTTTCCTAGTGAATCGTACAATCTCCAGTTTGGTGACCGATCCTAA

Protein sequence

MKSSNQKWLQVSHVEWLNFAEHSMHSGFISIAIKAYELALSRLQQSDTENCTSHSLSKCVEVIEKINRLKDHALKSAASHSVQALTSEYLKKKVTERNRKDSSFCTRTPFTASTLFRSGIRNHNARKLQEYQGLPEFPSESYNLQFGDRS

Homology

[Close]

BLAST of MC03g_new0012 vs. ExPASy Swiss-Prot
Match: Q8RX33 (Protein DOUBLE-STRAND BREAK FORMATION OS=Arabidopsis thaliana OX=3702 GN=DFO PE=1 SV=1)

HSP 1 Score: 58.9 bits (141), Expect = 5.6e-08
Identity = 35/81 (43.21%), Postives = 45/81 (55.56%), Query Frame = 0


Query: 1   MKSSNQKWLQVSHVEWLNFAEHSMHSGFISIAIKAYELALSRLQQSDTENCTSHSLSKCV 60
           +KS +  WL VSH EW  FA  SM +GF SIA KA E AL  L++       S   S  +
Sbjct: 131 LKSPSCLWLGVSHSEWTKFAVQSMENGFPSIAGKASENALLSLKKDSLIEPKSEDNSDIL 190

Query: 61  EVIEKINRLKDHALKSAASHS 82
           +  EK+ RL+D A    +SHS
Sbjct: 191 DAAEKVRRLRDSAASLTSSHS 211

[Close]

BLAST of MC03g_new0012 vs. NCBI nr
Match: XP_022154860.1 (uncharacterized protein LOC111022017 isoform X1 [Momordica charantia])

HSP 1 Score: 300 bits (769), Expect = 5.41e-101
Identity = 150/150 (100.00%), Postives = 150/150 (100.00%), Query Frame = 0


Query: 1   MKSSNQKWLQVSHVEWLNFAEHSMHSGFISIAIKAYELALSRLQQSDTENCTSHSLSKCV 60
           MKSSNQKWLQVSHVEWLNFAEHSMHSGFISIAIKAYELALSRLQQSDTENCTSHSLSKCV
Sbjct: 120 MKSSNQKWLQVSHVEWLNFAEHSMHSGFISIAIKAYELALSRLQQSDTENCTSHSLSKCV 179

Query: 61  EVIEKINRLKDHALKSAASHSVQALTSEYLKKKVTERNRKDSSFCTRTPFTASTLFRSGI 120
           EVIEKINRLKDHALKSAASHSVQALTSEYLKKKVTERNRKDSSFCTRTPFTASTLFRSGI
Sbjct: 180 EVIEKINRLKDHALKSAASHSVQALTSEYLKKKVTERNRKDSSFCTRTPFTASTLFRSGI 239

Query: 121 RNHNARKLQEYQGLPEFPSESYNLQFGDRS 150
           RNHNARKLQEYQGLPEFPSESYNLQFGDRS
Sbjct: 240 RNHNARKLQEYQGLPEFPSESYNLQFGDRS 269

[Close]

BLAST of MC03g_new0012 vs. NCBI nr
Match: KAG6583341.1 (Protein DOUBLE-STRAND BREAK FORMATION, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 216 bits (549), Expect = 1.62e-67
Identity = 114/150 (76.00%), Postives = 123/150 (82.00%), Query Frame = 0


Query: 1   MKSSNQKWLQVSHVEWLNFAEHSMHSGFISIAIKAYELALSRLQQSDTENCTSHSLSKCV 60
           +KS NQ  LQVSH EWLNFAEHS+++GF SIAIKAYE ALS LQQSDT N TSH  SKC 
Sbjct: 123 LKSFNQPRLQVSHAEWLNFAEHSLNTGFFSIAIKAYEQALSSLQQSDTANYTSHDSSKCA 182

Query: 61  EVIEKINRLKDHALKSAASHSVQALTSEYLKKKVTERNRKDSSFCTRTPFTASTLFRSGI 120
           EVIEKI RLKDHALKSA SHSVQALTSEYLKKKVTERNRK SS CTR  FTASTLFR+GI
Sbjct: 183 EVIEKIKRLKDHALKSAGSHSVQALTSEYLKKKVTERNRKISSSCTRK-FTASTLFRNGI 242

Query: 121 RNHNARKLQEYQGLPEFPSESYNLQFGDRS 150
           RNHNA++L EYQ L    SESY +Q  D+S
Sbjct: 243 RNHNAKRLHEYQALEGLTSESYKIQIHDQS 271

[Close]

BLAST of MC03g_new0012 vs. NCBI nr
Match: XP_022964954.1 (uncharacterized protein LOC111464906 isoform X1 [Cucurbita moschata])

HSP 1 Score: 214 bits (546), Expect = 2.57e-67
Identity = 113/150 (75.33%), Postives = 123/150 (82.00%), Query Frame = 0


Query: 1   MKSSNQKWLQVSHVEWLNFAEHSMHSGFISIAIKAYELALSRLQQSDTENCTSHSLSKCV 60
           +KS NQ  LQVSH EWLNFAEHS+++GF SIAIKAYE ALS LQQSDT N TSH  SKC 
Sbjct: 104 LKSFNQPRLQVSHAEWLNFAEHSLNAGFFSIAIKAYEQALSSLQQSDTANYTSHGSSKCA 163

Query: 61  EVIEKINRLKDHALKSAASHSVQALTSEYLKKKVTERNRKDSSFCTRTPFTASTLFRSGI 120
           EVIEKI RLKDHALKSA SHSVQALTSEYLKK+VTERNRK SS CTR  FTASTLFR+GI
Sbjct: 164 EVIEKIKRLKDHALKSAGSHSVQALTSEYLKKRVTERNRKISSSCTRK-FTASTLFRNGI 223

Query: 121 RNHNARKLQEYQGLPEFPSESYNLQFGDRS 150
           RNHNA++L EYQ L    SESY +Q  D+S
Sbjct: 224 RNHNAKRLHEYQALEGLTSESYKIQIHDQS 252

[Close]

BLAST of MC03g_new0012 vs. NCBI nr
Match: XP_023520165.1 (uncharacterized protein LOC111783465 isoform X2 [Cucurbita pepo subsp. pepo] >XP_023520166.1 uncharacterized protein LOC111783467 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 214 bits (546), Expect = 2.57e-67
Identity = 113/150 (75.33%), Postives = 123/150 (82.00%), Query Frame = 0


Query: 1   MKSSNQKWLQVSHVEWLNFAEHSMHSGFISIAIKAYELALSRLQQSDTENCTSHSLSKCV 60
           +KS NQ  LQVSH EWLNFAEHS+++GF SIA+KAYE ALS LQQSDT N TSH  SKC 
Sbjct: 104 LKSFNQPRLQVSHAEWLNFAEHSLNAGFFSIAMKAYEQALSSLQQSDTANYTSHGSSKCA 163

Query: 61  EVIEKINRLKDHALKSAASHSVQALTSEYLKKKVTERNRKDSSFCTRTPFTASTLFRSGI 120
           EVIEKI RLKDH+LKSA SHSVQALTSEYLKKKVTERNRK SS CTR  FTASTLFR+GI
Sbjct: 164 EVIEKIKRLKDHSLKSAGSHSVQALTSEYLKKKVTERNRKISSSCTRK-FTASTLFRNGI 223

Query: 121 RNHNARKLQEYQGLPEFPSESYNLQFGDRS 150
           RNHNA+KL EYQ L    SESY +Q  D+S
Sbjct: 224 RNHNAKKLHEYQALEGLTSESYKIQIHDQS 252

[Close]

BLAST of MC03g_new0012 vs. NCBI nr
Match: XP_022970619.1 (uncharacterized protein LOC111469552 isoform X1 [Cucurbita maxima])

HSP 1 Score: 212 bits (540), Expect = 2.09e-66
Identity = 114/150 (76.00%), Postives = 122/150 (81.33%), Query Frame = 0


Query: 1   MKSSNQKWLQVSHVEWLNFAEHSMHSGFISIAIKAYELALSRLQQSDTENCTSHSLSKCV 60
           +KS NQ  LQVSH EWLNFAEHS+++GF SIAIKAYE ALS LQQSDT N TSH  SK  
Sbjct: 104 LKSFNQPRLQVSHAEWLNFAEHSLNAGFFSIAIKAYEQALSSLQQSDTANYTSHGSSKRA 163

Query: 61  EVIEKINRLKDHALKSAASHSVQALTSEYLKKKVTERNRKDSSFCTRTPFTASTLFRSGI 120
           EVIEKI RLKDHALKSA SHSVQALTSEYLKKKVTERNRK SS CTR  FTASTLFR+GI
Sbjct: 164 EVIEKIKRLKDHALKSAGSHSVQALTSEYLKKKVTERNRKISSSCTRK-FTASTLFRNGI 223

Query: 121 RNHNARKLQEYQGLPEFPSESYNLQFGDRS 150
           RNHNA+KL EYQ L    SESY +Q  D+S
Sbjct: 224 RNHNAKKLHEYQALEGLTSESYKIQIHDQS 252

[Close]

BLAST of MC03g_new0012 vs. ExPASy TrEMBL
Match: A0A6J1DKU7 (uncharacterized protein LOC111022017 isoform X1 OS=Momordica charantia OX=3673 GN=LOC111022017 PE=4 SV=1)

HSP 1 Score: 300 bits (769), Expect = 2.62e-101
Identity = 150/150 (100.00%), Postives = 150/150 (100.00%), Query Frame = 0


Query: 1   MKSSNQKWLQVSHVEWLNFAEHSMHSGFISIAIKAYELALSRLQQSDTENCTSHSLSKCV 60
           MKSSNQKWLQVSHVEWLNFAEHSMHSGFISIAIKAYELALSRLQQSDTENCTSHSLSKCV
Sbjct: 120 MKSSNQKWLQVSHVEWLNFAEHSMHSGFISIAIKAYELALSRLQQSDTENCTSHSLSKCV 179

Query: 61  EVIEKINRLKDHALKSAASHSVQALTSEYLKKKVTERNRKDSSFCTRTPFTASTLFRSGI 120
           EVIEKINRLKDHALKSAASHSVQALTSEYLKKKVTERNRKDSSFCTRTPFTASTLFRSGI
Sbjct: 180 EVIEKINRLKDHALKSAASHSVQALTSEYLKKKVTERNRKDSSFCTRTPFTASTLFRSGI 239

Query: 121 RNHNARKLQEYQGLPEFPSESYNLQFGDRS 150
           RNHNARKLQEYQGLPEFPSESYNLQFGDRS
Sbjct: 240 RNHNARKLQEYQGLPEFPSESYNLQFGDRS 269

[Close]

BLAST of MC03g_new0012 vs. ExPASy TrEMBL
Match: A0A6J1HPP0 (uncharacterized protein LOC111464906 isoform X1 OS=Cucurbita moschata OX=3662 GN=LOC111464906 PE=4 SV=1)

HSP 1 Score: 214 bits (546), Expect = 1.24e-67
Identity = 113/150 (75.33%), Postives = 123/150 (82.00%), Query Frame = 0


Query: 1   MKSSNQKWLQVSHVEWLNFAEHSMHSGFISIAIKAYELALSRLQQSDTENCTSHSLSKCV 60
           +KS NQ  LQVSH EWLNFAEHS+++GF SIAIKAYE ALS LQQSDT N TSH  SKC 
Sbjct: 104 LKSFNQPRLQVSHAEWLNFAEHSLNAGFFSIAIKAYEQALSSLQQSDTANYTSHGSSKCA 163

Query: 61  EVIEKINRLKDHALKSAASHSVQALTSEYLKKKVTERNRKDSSFCTRTPFTASTLFRSGI 120
           EVIEKI RLKDHALKSA SHSVQALTSEYLKK+VTERNRK SS CTR  FTASTLFR+GI
Sbjct: 164 EVIEKIKRLKDHALKSAGSHSVQALTSEYLKKRVTERNRKISSSCTRK-FTASTLFRNGI 223

Query: 121 RNHNARKLQEYQGLPEFPSESYNLQFGDRS 150
           RNHNA++L EYQ L    SESY +Q  D+S
Sbjct: 224 RNHNAKRLHEYQALEGLTSESYKIQIHDQS 252

[Close]

BLAST of MC03g_new0012 vs. ExPASy TrEMBL
Match: A0A6J1I645 (uncharacterized protein LOC111469552 isoform X1 OS=Cucurbita maxima OX=3661 GN=LOC111469552 PE=4 SV=1)

HSP 1 Score: 212 bits (540), Expect = 1.01e-66
Identity = 114/150 (76.00%), Postives = 122/150 (81.33%), Query Frame = 0


Query: 1   MKSSNQKWLQVSHVEWLNFAEHSMHSGFISIAIKAYELALSRLQQSDTENCTSHSLSKCV 60
           +KS NQ  LQVSH EWLNFAEHS+++GF SIAIKAYE ALS LQQSDT N TSH  SK  
Sbjct: 104 LKSFNQPRLQVSHAEWLNFAEHSLNAGFFSIAIKAYEQALSSLQQSDTANYTSHGSSKRA 163

Query: 61  EVIEKINRLKDHALKSAASHSVQALTSEYLKKKVTERNRKDSSFCTRTPFTASTLFRSGI 120
           EVIEKI RLKDHALKSA SHSVQALTSEYLKKKVTERNRK SS CTR  FTASTLFR+GI
Sbjct: 164 EVIEKIKRLKDHALKSAGSHSVQALTSEYLKKKVTERNRKISSSCTRK-FTASTLFRNGI 223

Query: 121 RNHNARKLQEYQGLPEFPSESYNLQFGDRS 150
           RNHNA+KL EYQ L    SESY +Q  D+S
Sbjct: 224 RNHNAKKLHEYQALEGLTSESYKIQIHDQS 252

[Close]

BLAST of MC03g_new0012 vs. ExPASy TrEMBL
Match: A0A6J1HMC3 (uncharacterized protein LOC111464906 isoform X2 OS=Cucurbita moschata OX=3662 GN=LOC111464906 PE=4 SV=1)

HSP 1 Score: 202 bits (514), Expect = 8.59e-63
Identity = 106/134 (79.10%), Postives = 114/134 (85.07%), Query Frame = 0


Query: 1   MKSSNQKWLQVSHVEWLNFAEHSMHSGFISIAIKAYELALSRLQQSDTENCTSHSLSKCV 60
           +KS NQ  LQVSH EWLNFAEHS+++GF SIAIKAYE ALS LQQSDT N TSH  SKC 
Sbjct: 104 LKSFNQPRLQVSHAEWLNFAEHSLNAGFFSIAIKAYEQALSSLQQSDTANYTSHGSSKCA 163

Query: 61  EVIEKINRLKDHALKSAASHSVQALTSEYLKKKVTERNRKDSSFCTRTPFTASTLFRSGI 120
           EVIEKI RLKDHALKSA SHSVQALTSEYLKK+VTERNRK SS CTR  FTASTLFR+GI
Sbjct: 164 EVIEKIKRLKDHALKSAGSHSVQALTSEYLKKRVTERNRKISSSCTRK-FTASTLFRNGI 223

Query: 121 RNHNARKLQEYQGL 134
           RNHNA++L EYQ L
Sbjct: 224 RNHNAKRLHEYQAL 236

[Close]

BLAST of MC03g_new0012 vs. ExPASy TrEMBL
Match: A0A6J1I136 (uncharacterized protein LOC111469552 isoform X2 OS=Cucurbita maxima OX=3661 GN=LOC111469552 PE=4 SV=1)

HSP 1 Score: 200 bits (508), Expect = 6.56e-62
Identity = 107/134 (79.85%), Postives = 113/134 (84.33%), Query Frame = 0


Query: 1   MKSSNQKWLQVSHVEWLNFAEHSMHSGFISIAIKAYELALSRLQQSDTENCTSHSLSKCV 60
           +KS NQ  LQVSH EWLNFAEHS+++GF SIAIKAYE ALS LQQSDT N TSH  SK  
Sbjct: 104 LKSFNQPRLQVSHAEWLNFAEHSLNAGFFSIAIKAYEQALSSLQQSDTANYTSHGSSKRA 163

Query: 61  EVIEKINRLKDHALKSAASHSVQALTSEYLKKKVTERNRKDSSFCTRTPFTASTLFRSGI 120
           EVIEKI RLKDHALKSA SHSVQALTSEYLKKKVTERNRK SS CTR  FTASTLFR+GI
Sbjct: 164 EVIEKIKRLKDHALKSAGSHSVQALTSEYLKKKVTERNRKISSSCTRK-FTASTLFRNGI 223

Query: 121 RNHNARKLQEYQGL 134
           RNHNA+KL EYQ L
Sbjct: 224 RNHNAKKLHEYQAL 236

[Close]

BLAST of MC03g_new0012 vs. TAIR 10
Match: AT1G07060.1 (unknown protein; Has 30 Blast hits to 30 proteins in 10 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 30; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). )

HSP 1 Score: 58.9 bits (141), Expect = 4.0e-09
Identity = 35/81 (43.21%), Postives = 45/81 (55.56%), Query Frame = 0


Query: 1   MKSSNQKWLQVSHVEWLNFAEHSMHSGFISIAIKAYELALSRLQQSDTENCTSHSLSKCV 60
           +KS +  WL VSH EW  FA  SM +GF SIA KA E AL  L++       S   S  +
Sbjct: 131 LKSPSCLWLGVSHSEWTKFAVQSMENGFPSIAGKASENALLSLKKDSLIEPKSEDNSDIL 190

Query: 61  EVIEKINRLKDHALKSAASHS 82
           +  EK+ RL+D A    +SHS
Sbjct: 191 DAAEKVRRLRDSAASLTSSHS 211

The following BLAST results are available for this feature:

BLAST of MC03g_new0012 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q8RX33	5.6e-08	43.21	Protein DOUBLE-STRAND BREAK FORMATION OS=Arabidopsis thaliana OX=3702 GN=DFO PE=...	[more]

BLAST of MC03g_new0012 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022154860.1	5.41e-101	100.00	uncharacterized protein LOC111022017 isoform X1 [Momordica charantia]	[more]
KAG6583341.1	1.62e-67	76.00	Protein DOUBLE-STRAND BREAK FORMATION, partial [Cucurbita argyrosperma subsp. so...	[more]
XP_022964954.1	2.57e-67	75.33	uncharacterized protein LOC111464906 isoform X1 [Cucurbita moschata]	[more]
XP_023520165.1	2.57e-67	75.33	uncharacterized protein LOC111783465 isoform X2 [Cucurbita pepo subsp. pepo] >XP...	[more]
XP_022970619.1	2.09e-66	76.00	uncharacterized protein LOC111469552 isoform X1 [Cucurbita maxima]	[more]

BLAST of MC03g_new0012 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1DKU7	2.62e-101	100.00	uncharacterized protein LOC111022017 isoform X1 OS=Momordica charantia OX=3673 G...	[more]
A0A6J1HPP0	1.24e-67	75.33	uncharacterized protein LOC111464906 isoform X1 OS=Cucurbita moschata OX=3662 GN...	[more]
A0A6J1I645	1.01e-66	76.00	uncharacterized protein LOC111469552 isoform X1 OS=Cucurbita maxima OX=3661 GN=L...	[more]
A0A6J1HMC3	8.59e-63	79.10	uncharacterized protein LOC111464906 isoform X2 OS=Cucurbita moschata OX=3662 GN...	[more]
A0A6J1I136	6.56e-62	79.85	uncharacterized protein LOC111469552 isoform X2 OS=Cucurbita maxima OX=3661 GN=L...	[more]

BLAST of MC03g_new0012 vs. TAIR 10


Match Name	E-value	Identity	Description
AT1G07060.1	4.0e-09	43.21	unknown protein; Has 30 Blast hits to 30 proteins in 10 species: Archae - 0; Bac...	[more]

InterPro

Analysis Name: InterPro Annotations of Bitter gourd (Dali-11) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR044969	Protein DOUBLE-STRAND BREAK FORMATION	PANTHER	PTHR37176	F10K1.23	coord: 2..133

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
MC03g_new0012.1	MC03g_new0012.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0042138	meiotic DNA double-strand break formation