MC03g1342 (gene) Bitter gourd (Dali-11) v1

Overview


Name	MC03g1342
Type	gene
Organism	Momordica charantia cv. Dali-11 (Bitter gourd (Dali-11) v1)
Description	16.9 kDa class I heat shock protein 3
Location	MC03: 19040873 .. 19042446 (-)
RNA-Seq Expression	MC03g1342
Synteny	MC03g1342

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: utr5polypeptideCDSutr3

Hold the cursor over a type above to highlight its positions in the sequence below.

GCTGTTAAAAAAAAAAACGAAATAATAGTAACATTGTTTAGTACGATAACAGTAGATTTGAACCTCGTGGAGTAAAACGCCTGATGTCGTGAGAATAGAAAGAAATCGCATGTCAAAGATATGATTTACATAAATGGTGTTTGGATATTGCAATTTAATCGTAAATCGCCGTAAAGGCAGATTAGGATTTAGTTCCCCGATTTCAGCGTAATCGCGTTTTCGAGAATGCCTCTTCGTCTTCGATTTTGGTGTTCCTCACATCTGCTCTTTCTCTGTGGGCTTTGACGACAGATCAAGATTAGTTACTTCACACCAATACTGGAAGTCGACTTTCCGTAGGGTTTGCGGGATCAAAGGTTAAGGAATCAATGTAAGTAAGAATATTTGTAATTCTAAAGCGAAAGGCATTGAATTAGCGCAGTCACATCCCCTCCAAGGCAGGATTATCGTCATAGAGAGCAAGGAACAGAGCATGGCGAGGATTGCCCTAACCCTGAAGAAACCACAAAGCCTCTTATCAGTTGCAAACGAATCTTTCTTCTCTGCAAGAAAGCCTAAAGAAATCTCCGATCTCGTCTCTCAAATTGCCTCTATATAAAAAAGAAAAAAACGAAGAGAGGCTTACAAAATTATCTGCATTCAATTGGATTGCCGCACGACAACAAACCATACCAATTACCAACAATGGCAAAAGATGGAGTGACGTACGAGGACTTCGAACCTTTCTGCCAATGGAAAAGACTCGATGACTCTGACGTTCTTGAGGTTCATCTCCCAGGTTTGTGCTTATAATTCCTCTGCATTCTCATAGTATTCATAGTGATTTGAAATTTATTTTTCTTGAACAATACGTTTAAAATTGTGCTGTATTGTGTACTGTCCTTACAAACAGAATTCAAGAAGGAAGAATTGAGGGTTCGGATCAGTAACAACGCTCTCCTTACAGTTTCCGGCGAGCGCCTAAAAGCCAATGATCCGAAGAAGATCAAATTCAACAGAGAATTCAAACTATCAAAGGATATATACCCAGACCAAATCCGTGCCAAATTCGGTAGCAGTGTTCTTTCGATCACGATGCCTAAGAAAGCATCAGCGGGTGTCGGCAAACCAGAAGCGGGCGTATCCAACTCCGAGGGTAAACGAACAGCAGACAGTGATAATGATAAGCCAAAGAACTTCATATCAAGTCGATTCTCGAGGTTGAAATTGAGCAAGCAGACGGCCGCGGCCATGGCGGTTGCAGCGGTGATTCTGGCATTGGGAGCTTACTATTTAACAAAAAACTAGGGATGATCTTGCAACGCTGCAAACGTTTGTTTATTTGTGGGAAACTACATAATACAGAATATATCAAATGTGTACACTTTTTAATTTAGATTCATGAATAAGTATTCATTTGCTATGAGCCCTGATCCCGATTGATGACGATCCACTTTGATTTGATTTGATTTCTGCAATTTCTTTGAACCTTCGAATATCCCCATAGCTGAGAAGCTGACAATTCAATGGGTGGGGGCTTCCCAGATAATCAAATCCCCTTTGATTTTTGAATGCACAGGATGAGGAGAAAGGAG

mRNA sequence

GCTGTTAAAAAAAAAAACGAAATAATAGTAACATTGTTTAGTACGATAACAGTAGATTTGAACCTCGTGGAGTAAAACGCCTGATGTCGTGAGAATAGAAAGAAATCGCATGTCAAAGATATGATTTACATAAATGGTGTTTGGATATTGCAATTTAATCGTAAATCGCCGTAAAGGCAGATTAGGATTTAGTTCCCCGATTTCAGCGTAATCGCGTTTTCGAGAATGCCTCTTCGTCTTCGATTTTGGTGTTCCTCACATCTGCTCTTTCTCTGTGGGCTTTGACGACAGATCAAGATTAGTTACTTCACACCAATACTGGAAGTCGACTTTCCGTAGGGTTTGCGGGATCAAAGGTTAAGGAATCAATGTAAGTAAGAATATTTGTAATTCTAAAGCGAAAGGCATTGAATTAGCGCAGTCACATCCCCTCCAAGGCAGGATTATCGTCATAGAGAGCAAGGAACAGAGCATGGCGAGGATTGCCCTAACCCTGAAGAAACCACAAAGCCTCTTATCAGTTGCAAACGAATCTTTCTTCTCTGCAAGAAAGCCTAAAGAAATCTCCGATCTCGTCTCTCAAATTGCCTCTATATAAAAAAGAAAAAAACGAAGAGAGGCTTACAAAATTATCTGCATTCAATTGGATTGCCGCACGACAACAAACCATACCAATTACCAACAATGGCAAAAGATGGAGTGACGTACGAGGACTTCGAACCTTTCTGCCAATGGAAAAGACTCGATGACTCTGACGTTCTTGAGGTTCATCTCCCAGAATTCAAGAAGGAAGAATTGAGGGTTCGGATCAGTAACAACGCTCTCCTTACAGTTTCCGGCGAGCGCCTAAAAGCCAATGATCCGAAGAAGATCAAATTCAACAGAGAATTCAAACTATCAAAGGATATATACCCAGACCAAATCCGTGCCAAATTCGGTAGCAGTGTTCTTTCGATCACGATGCCTAAGAAAGCATCAGCGGGTGTCGGCAAACCAGAAGCGGGCGTATCCAACTCCGAGGGTAAACGAACAGCAGACAGTGATAATGATAAGCCAAAGAACTTCATATCAAGTCGATTCTCGAGGTTGAAATTGAGCAAGCAGACGGCCGCGGCCATGGCGGTTGCAGCGGTGATTCTGGCATTGGGAGCTTACTATTTAACAAAAAACTAGGGATGATCTTGCAACGCTGCAAACGTTTGTTTATTTGTGGGAAACTACATAATACAGAATATATCAAATGTGTACACTTTTTAATTTAGATTCATGAATAAGTATTCATTTGCTATGAGCCCTGATCCCGATTGATGACGATCCACTTTGATTTGATTTGATTTCTGCAATTTCTTTGAACCTTCGAATATCCCCATAGCTGAGAAGCTGACAATTCAATGGGTGGGGGCTTCCCAGATAATCAAATCCCCTTTGATTTTTGAATGCACAGGATGAGGAGAAAGGAG

Coding sequence (CDS)

ATGGCAAAAGATGGAGTGACGTACGAGGACTTCGAACCTTTCTGCCAATGGAAAAGACTCGATGACTCTGACGTTCTTGAGGTTCATCTCCCAGAATTCAAGAAGGAAGAATTGAGGGTTCGGATCAGTAACAACGCTCTCCTTACAGTTTCCGGCGAGCGCCTAAAAGCCAATGATCCGAAGAAGATCAAATTCAACAGAGAATTCAAACTATCAAAGGATATATACCCAGACCAAATCCGTGCCAAATTCGGTAGCAGTGTTCTTTCGATCACGATGCCTAAGAAAGCATCAGCGGGTGTCGGCAAACCAGAAGCGGGCGTATCCAACTCCGAGGGTAAACGAACAGCAGACAGTGATAATGATAAGCCAAAGAACTTCATATCAAGTCGATTCTCGAGGTTGAAATTGAGCAAGCAGACGGCCGCGGCCATGGCGGTTGCAGCGGTGATTCTGGCATTGGGAGCTTACTATTTAACAAAAAACTAG

Protein sequence

MAKDGVTYEDFEPFCQWKRLDDSDVLEVHLPEFKKEELRVRISNNALLTVSGERLKANDPKKIKFNREFKLSKDIYPDQIRAKFGSSVLSITMPKKASAGVGKPEAGVSNSEGKRTADSDNDKPKNFISSRFSRLKLSKQTAAAMAVAAVILALGAYYLTKN

Homology

[Close]

BLAST of MC03g1342 vs. ExPASy Swiss-Prot
Match: D9UBX6 (Inactive protein RESTRICTED TEV MOVEMENT 2 OS=Arabidopsis thaliana OX=3702 GN=RTM2 PE=3 SV=1)

HSP 1 Score: 65.1 bits (157), Expect = 8.4e-10
Identity = 35/93 (37.63%), Postives = 58/93 (62.37%), Query Frame = 0


Query: 5   GVTYEDFEPFCQWKRLDDSDVLEVHLPEFKKEELRVR-ISNNALLTVSGERLKANDPKKI 64
           GV YEDF P  +WK   ++ +L + L  F KE+++V  + ++ ++ V+GER  AN  K  
Sbjct: 13  GVQYEDFVPKSEWKDQPEATILNIDLTGFAKEQMKVTYVHSSKMIRVTGERPLAN-RKWS 72

Query: 65  KFNREFKLSKDIYPDQIRAKFGSSVLSITMPKK 97
           +FN  F + ++   D+I   F ++VL+ITMPK+
Sbjct: 73  RFNEVFTVPQNCLVDKIHGSFKNNVLTITMPKE 104

[Close]

BLAST of MC03g1342 vs. ExPASy Swiss-Prot
Match: D9UBX4 (Inactive protein RESTRICTED TEV MOVEMENT 2 OS=Arabidopsis thaliana OX=3702 GN=RTM2 PE=3 SV=1)

HSP 1 Score: 65.1 bits (157), Expect = 8.4e-10
Identity = 35/93 (37.63%), Postives = 58/93 (62.37%), Query Frame = 0


Query: 5   GVTYEDFEPFCQWKRLDDSDVLEVHLPEFKKEELRVR-ISNNALLTVSGERLKANDPKKI 64
           GV YEDF P  +WK   ++ +L + L  F KE+++V  + ++ ++ V+GER  AN  K  
Sbjct: 13  GVQYEDFVPKSEWKDQPEATILNIDLTGFAKEQMKVTYVHSSKMIRVTGERPLAN-RKWS 72

Query: 65  KFNREFKLSKDIYPDQIRAKFGSSVLSITMPKK 97
           +FN  F + ++   D+I   F ++VL+ITMPK+
Sbjct: 73  RFNEVFTVPQNCLVDKIHGSFKNNVLTITMPKE 104

[Close]

BLAST of MC03g1342 vs. ExPASy Swiss-Prot
Match: Q9M670 (Protein RESTRICTED TEV MOVEMENT 2 OS=Arabidopsis thaliana OX=3702 GN=RTM2 PE=1 SV=1)

HSP 1 Score: 65.1 bits (157), Expect = 8.4e-10
Identity = 35/93 (37.63%), Postives = 58/93 (62.37%), Query Frame = 0


Query: 5   GVTYEDFEPFCQWKRLDDSDVLEVHLPEFKKEELRVR-ISNNALLTVSGERLKANDPKKI 64
           GV YEDF P  +WK   ++ +L + L  F KE+++V  + ++ ++ V+GER  AN  K  
Sbjct: 13  GVQYEDFVPKSEWKDQPEATILNIDLTGFAKEQMKVTYVHSSKMIRVTGERPLAN-RKWS 72

Query: 65  KFNREFKLSKDIYPDQIRAKFGSSVLSITMPKK 97
           +FN  F + ++   D+I   F ++VL+ITMPK+
Sbjct: 73  RFNEVFTVPQNCLVDKIHGSFKNNVLTITMPKE 104

[Close]

BLAST of MC03g1342 vs. ExPASy Swiss-Prot
Match: D5K211 (Inactive protein RESTRICTED TEV MOVEMENT 2 OS=Arabidopsis thaliana OX=3702 GN=RTM2 PE=3 SV=1)

HSP 1 Score: 64.7 bits (156), Expect = 1.1e-09
Identity = 35/93 (37.63%), Postives = 58/93 (62.37%), Query Frame = 0


Query: 5   GVTYEDFEPFCQWKRLDDSDVLEVHLPEFKKEELRVR-ISNNALLTVSGERLKANDPKKI 64
           GV YEDF P  +WK   ++ +L + L  F KE+++V  + ++ ++ V+GER  AN  K  
Sbjct: 13  GVQYEDFVPKSEWKDQPEATILNIDLTGFAKEQMKVTYVHSSKMIRVTGERPLAN-RKWN 72

Query: 65  KFNREFKLSKDIYPDQIRAKFGSSVLSITMPKK 97
           +FN  F + ++   D+I   F ++VL+ITMPK+
Sbjct: 73  RFNEVFTVPQNCLVDKIHGSFKNNVLTITMPKE 104

[Close]

BLAST of MC03g1342 vs. ExPASy Swiss-Prot
Match: D9UC01 (Inactive protein RESTRICTED TEV MOVEMENT 2 OS=Arabidopsis thaliana OX=3702 GN=RTM2 PE=3 SV=1)

HSP 1 Score: 64.3 bits (155), Expect = 1.4e-09
Identity = 35/93 (37.63%), Postives = 57/93 (61.29%), Query Frame = 0


Query: 5   GVTYEDFEPFCQWKRLDDSDVLEVHLPEFKKEELRVR-ISNNALLTVSGERLKANDPKKI 64
           GV YEDF P  +WK   ++ +L + L  F KE+++V  + ++ ++ V+GER  AN  K  
Sbjct: 13  GVQYEDFVPKSEWKDQPEATILNIDLTGFAKEQMKVTYVHSSKMIRVTGERPLAN-RKWN 72

Query: 65  KFNREFKLSKDIYPDQIRAKFGSSVLSITMPKK 97
           +FN  F + ++   D+I   F  +VL+ITMPK+
Sbjct: 73  RFNEVFTVPQNCLVDKIHGSFKKNVLTITMPKE 104

[Close]

BLAST of MC03g1342 vs. NCBI nr
Match: XP_022137119.1 (16.9 kDa class I heat shock protein 3 [Momordica charantia])

HSP 1 Score: 309 bits (792), Expect = 6.98e-106
Identity = 162/162 (100.00%), Postives = 162/162 (100.00%), Query Frame = 0


Query: 1   MAKDGVTYEDFEPFCQWKRLDDSDVLEVHLPEFKKEELRVRISNNALLTVSGERLKANDP 60
           MAKDGVTYEDFEPFCQWKRLDDSDVLEVHLPEFKKEELRVRISNNALLTVSGERLKANDP
Sbjct: 1   MAKDGVTYEDFEPFCQWKRLDDSDVLEVHLPEFKKEELRVRISNNALLTVSGERLKANDP 60

Query: 61  KKIKFNREFKLSKDIYPDQIRAKFGSSVLSITMPKKASAGVGKPEAGVSNSEGKRTADSD 120
           KKIKFNREFKLSKDIYPDQIRAKFGSSVLSITMPKKASAGVGKPEAGVSNSEGKRTADSD
Sbjct: 61  KKIKFNREFKLSKDIYPDQIRAKFGSSVLSITMPKKASAGVGKPEAGVSNSEGKRTADSD 120

Query: 121 NDKPKNFISSRFSRLKLSKQTAAAMAVAAVILALGAYYLTKN 162
           NDKPKNFISSRFSRLKLSKQTAAAMAVAAVILALGAYYLTKN
Sbjct: 121 NDKPKNFISSRFSRLKLSKQTAAAMAVAAVILALGAYYLTKN 162

[Close]

BLAST of MC03g1342 vs. NCBI nr
Match: XP_008465577.1 (PREDICTED: 16.9 kDa class I heat shock protein 1 [Cucumis melo] >KAA0036046.1 16.9 kDa class I heat shock protein 1 [Cucumis melo var. makuwa] >TYJ98853.1 16.9 kDa class I heat shock protein 1 [Cucumis melo var. makuwa])

HSP 1 Score: 201 bits (511), Expect = 5.47e-63
Identity = 113/165 (68.48%), Postives = 126/165 (76.36%), Query Frame = 0


Query: 5   GVTYEDFEPFCQWKRLDDSDVLEVHLPEFKKEELRVRISNNALLTVSGERLKANDPKKIK 64
           GV YE+FEPFC+WK+L+DSDVLEVHLPEFKKEELRVRI NN++LT+SGE L A D KK+ 
Sbjct: 8   GVLYEEFEPFCKWKKLEDSDVLEVHLPEFKKEELRVRIKNNSILTLSGEHLTAKDGKKMH 67

Query: 65  FNREFKLSKDIYPDQIRAKFGSSVLSITMPKKASAGVGKPEAGVSN----SEGKRTADSD 124
           FNRE KL KDIYPD+IRAKFG +VLSITMPKKAS     PE    N    SE K T  + 
Sbjct: 68  FNREIKLPKDIYPDEIRAKFGGNVLSITMPKKASP----PEISKPNPDNASEDKLTQSNG 127

Query: 125 NDKPKNFIS---SRFSRLKLSKQTAAAMAVAAVILALGAYYLTKN 162
           N KPKNFIS   S  SRLK SK+TA AMAVA VILA+G YYL KN
Sbjct: 128 NGKPKNFISRLKSPLSRLKFSKETATAMAVAVVILAVGVYYLIKN 168

[Close]

BLAST of MC03g1342 vs. NCBI nr
Match: XP_023001660.1 (17.8 kDa class I heat shock protein-like [Cucurbita maxima])

HSP 1 Score: 201 bits (510), Expect = 8.84e-63
Identity = 112/164 (68.29%), Postives = 131/164 (79.88%), Query Frame = 0


Query: 5   GVTYEDFEPFCQWKRLDDSDV--LEVHLPEFKKEELRVRISNNALLTVSGERLKANDPKK 64
            V+YE+FEPFC+WK+LDDSDV  LEVHLPEFKKEELRVRI NN++L +SGE L AND KK
Sbjct: 8   NVSYEEFEPFCKWKKLDDSDVHVLEVHLPEFKKEELRVRIKNNSILAISGEHLTANDGKK 67

Query: 65  IKFNREFKLSKDIYPDQIRAKFGSSVLSITMPKK-ASAGVGKPEAGVSNSEGKRTADSDN 124
           ++FNRE KL KDIYPDQIRAKFG SVLSITMPKK +SA +GKP+A  + SEG  TA +D+
Sbjct: 68  MQFNREIKLPKDIYPDQIRAKFGGSVLSITMPKKPSSAEIGKPKADAA-SEGNDTAPNDD 127

Query: 125 DKPKNFIS---SRFSRLKLSKQTAAAMAVAAVILALGAYYLTKN 162
            +PKN IS   S  SRLK SK+ A A+A A +ILA GAYYL KN
Sbjct: 128 GEPKNLISRLTSPLSRLKFSKKKATALAAAVLILAFGAYYLVKN 170

[Close]

BLAST of MC03g1342 vs. NCBI nr
Match: XP_023520341.1 (17.8 kDa class I heat shock protein-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 199 bits (506), Expect = 3.47e-62
Identity = 114/164 (69.51%), Postives = 131/164 (79.88%), Query Frame = 0


Query: 5   GVTYEDFEPFCQWKRLDDSDV--LEVHLPEFKKEELRVRISNNALLTVSGERLKANDPKK 64
            V+YE+FEPFC+WK+LDDSDV  LEVHLPEFKKEELRVRI NN++L +SGE L AND KK
Sbjct: 8   NVSYEEFEPFCKWKKLDDSDVHVLEVHLPEFKKEELRVRIKNNSILAISGEHL-ANDGKK 67

Query: 65  IKFNREFKLSKDIYPDQIRAKFGSSVLSITMPKK-ASAGVGKPEAGVSNSEGKRTADSDN 124
           ++FNRE KL KDIYPDQIRAKFG SVLSITMPKK +SA +GKP+A  + SEG  TA +D+
Sbjct: 68  MQFNREIKLPKDIYPDQIRAKFGGSVLSITMPKKPSSAEIGKPKADAA-SEGNDTAPNDD 127

Query: 125 DKPKNFIS---SRFSRLKLSKQTAAAMAVAAVILALGAYYLTKN 162
            KPKN IS   S  SRLK SK+ A A+A A VILA GAYYL KN
Sbjct: 128 GKPKNLISRLTSPLSRLKFSKKKATALAAAVVILAFGAYYLIKN 169

[Close]

BLAST of MC03g1342 vs. NCBI nr
Match: XP_022923784.1 (17.8 kDa class I heat shock protein-like [Cucurbita moschata] >KAG6584432.1 17.8 kDa class I heat shock protein, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 195 bits (495), Expect = 1.63e-60
Identity = 113/164 (68.90%), Postives = 129/164 (78.66%), Query Frame = 0


Query: 5   GVTYEDFEPFCQWKRLDDSDV--LEVHLPEFKKEELRVRISNNALLTVSGERLKANDPKK 64
            V+YE+FEPFC+WK+LDDSDV  LEVHLPEFKKEELRVRI NN++L +SGE L AND KK
Sbjct: 8   NVSYEEFEPFCKWKKLDDSDVHVLEVHLPEFKKEELRVRIKNNSILAISGEHL-ANDGKK 67

Query: 65  IKFNREFKLSKDIYPDQIRAKFGSSVLSITMPKK-ASAGVGKPEAGVSNSEGKRTADSDN 124
           ++FNRE KL KDIYPDQIRAKFG SVLSITMPKK +SA   KP+A  + SEG  TA +D+
Sbjct: 68  MQFNREIKLPKDIYPDQIRAKFGGSVLSITMPKKPSSAESSKPKADAA-SEGNDTAPNDD 127

Query: 125 DKPKNFIS---SRFSRLKLSKQTAAAMAVAAVILALGAYYLTKN 162
            KPKN IS   S  SRLK SK+ A A+A A VILA GAYYL KN
Sbjct: 128 GKPKNLISRLTSPLSRLKFSKKKATALAAAVVILAFGAYYLIKN 169

[Close]

BLAST of MC03g1342 vs. ExPASy TrEMBL
Match: A0A6J1C6B8 (16.9 kDa class I heat shock protein 3 OS=Momordica charantia OX=3673 GN=LOC111008672 PE=3 SV=1)

HSP 1 Score: 309 bits (792), Expect = 3.38e-106
Identity = 162/162 (100.00%), Postives = 162/162 (100.00%), Query Frame = 0


Query: 1   MAKDGVTYEDFEPFCQWKRLDDSDVLEVHLPEFKKEELRVRISNNALLTVSGERLKANDP 60
           MAKDGVTYEDFEPFCQWKRLDDSDVLEVHLPEFKKEELRVRISNNALLTVSGERLKANDP
Sbjct: 1   MAKDGVTYEDFEPFCQWKRLDDSDVLEVHLPEFKKEELRVRISNNALLTVSGERLKANDP 60

Query: 61  KKIKFNREFKLSKDIYPDQIRAKFGSSVLSITMPKKASAGVGKPEAGVSNSEGKRTADSD 120
           KKIKFNREFKLSKDIYPDQIRAKFGSSVLSITMPKKASAGVGKPEAGVSNSEGKRTADSD
Sbjct: 61  KKIKFNREFKLSKDIYPDQIRAKFGSSVLSITMPKKASAGVGKPEAGVSNSEGKRTADSD 120

Query: 121 NDKPKNFISSRFSRLKLSKQTAAAMAVAAVILALGAYYLTKN 162
           NDKPKNFISSRFSRLKLSKQTAAAMAVAAVILALGAYYLTKN
Sbjct: 121 NDKPKNFISSRFSRLKLSKQTAAAMAVAAVILALGAYYLTKN 162

[Close]

BLAST of MC03g1342 vs. ExPASy TrEMBL
Match: A0A5D3BHU7 (16.9 kDa class I heat shock protein 1 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold248G00480 PE=3 SV=1)

HSP 1 Score: 201 bits (511), Expect = 2.65e-63
Identity = 113/165 (68.48%), Postives = 126/165 (76.36%), Query Frame = 0


Query: 5   GVTYEDFEPFCQWKRLDDSDVLEVHLPEFKKEELRVRISNNALLTVSGERLKANDPKKIK 64
           GV YE+FEPFC+WK+L+DSDVLEVHLPEFKKEELRVRI NN++LT+SGE L A D KK+ 
Sbjct: 8   GVLYEEFEPFCKWKKLEDSDVLEVHLPEFKKEELRVRIKNNSILTLSGEHLTAKDGKKMH 67

Query: 65  FNREFKLSKDIYPDQIRAKFGSSVLSITMPKKASAGVGKPEAGVSN----SEGKRTADSD 124
           FNRE KL KDIYPD+IRAKFG +VLSITMPKKAS     PE    N    SE K T  + 
Sbjct: 68  FNREIKLPKDIYPDEIRAKFGGNVLSITMPKKASP----PEISKPNPDNASEDKLTQSNG 127

Query: 125 NDKPKNFIS---SRFSRLKLSKQTAAAMAVAAVILALGAYYLTKN 162
           N KPKNFIS   S  SRLK SK+TA AMAVA VILA+G YYL KN
Sbjct: 128 NGKPKNFISRLKSPLSRLKFSKETATAMAVAVVILAVGVYYLIKN 168

[Close]

BLAST of MC03g1342 vs. ExPASy TrEMBL
Match: A0A1S3CP71 (16.9 kDa class I heat shock protein 1 OS=Cucumis melo OX=3656 GN=LOC103502934 PE=3 SV=1)

HSP 1 Score: 201 bits (511), Expect = 2.65e-63
Identity = 113/165 (68.48%), Postives = 126/165 (76.36%), Query Frame = 0


Query: 5   GVTYEDFEPFCQWKRLDDSDVLEVHLPEFKKEELRVRISNNALLTVSGERLKANDPKKIK 64
           GV YE+FEPFC+WK+L+DSDVLEVHLPEFKKEELRVRI NN++LT+SGE L A D KK+ 
Sbjct: 8   GVLYEEFEPFCKWKKLEDSDVLEVHLPEFKKEELRVRIKNNSILTLSGEHLTAKDGKKMH 67

Query: 65  FNREFKLSKDIYPDQIRAKFGSSVLSITMPKKASAGVGKPEAGVSN----SEGKRTADSD 124
           FNRE KL KDIYPD+IRAKFG +VLSITMPKKAS     PE    N    SE K T  + 
Sbjct: 68  FNREIKLPKDIYPDEIRAKFGGNVLSITMPKKASP----PEISKPNPDNASEDKLTQSNG 127

Query: 125 NDKPKNFIS---SRFSRLKLSKQTAAAMAVAAVILALGAYYLTKN 162
           N KPKNFIS   S  SRLK SK+TA AMAVA VILA+G YYL KN
Sbjct: 128 NGKPKNFISRLKSPLSRLKFSKETATAMAVAVVILAVGVYYLIKN 168

[Close]

BLAST of MC03g1342 vs. ExPASy TrEMBL
Match: A0A6J1KLT1 (17.8 kDa class I heat shock protein-like OS=Cucurbita maxima OX=3661 GN=LOC111495735 PE=3 SV=1)

HSP 1 Score: 201 bits (510), Expect = 4.28e-63
Identity = 112/164 (68.29%), Postives = 131/164 (79.88%), Query Frame = 0


Query: 5   GVTYEDFEPFCQWKRLDDSDV--LEVHLPEFKKEELRVRISNNALLTVSGERLKANDPKK 64
            V+YE+FEPFC+WK+LDDSDV  LEVHLPEFKKEELRVRI NN++L +SGE L AND KK
Sbjct: 8   NVSYEEFEPFCKWKKLDDSDVHVLEVHLPEFKKEELRVRIKNNSILAISGEHLTANDGKK 67

Query: 65  IKFNREFKLSKDIYPDQIRAKFGSSVLSITMPKK-ASAGVGKPEAGVSNSEGKRTADSDN 124
           ++FNRE KL KDIYPDQIRAKFG SVLSITMPKK +SA +GKP+A  + SEG  TA +D+
Sbjct: 68  MQFNREIKLPKDIYPDQIRAKFGGSVLSITMPKKPSSAEIGKPKADAA-SEGNDTAPNDD 127

Query: 125 DKPKNFIS---SRFSRLKLSKQTAAAMAVAAVILALGAYYLTKN 162
            +PKN IS   S  SRLK SK+ A A+A A +ILA GAYYL KN
Sbjct: 128 GEPKNLISRLTSPLSRLKFSKKKATALAAAVLILAFGAYYLVKN 170

[Close]

BLAST of MC03g1342 vs. ExPASy TrEMBL
Match: A0A6J1E7D1 (17.8 kDa class I heat shock protein-like OS=Cucurbita moschata OX=3662 GN=LOC111431393 PE=3 SV=1)

HSP 1 Score: 195 bits (495), Expect = 7.91e-61
Identity = 113/164 (68.90%), Postives = 129/164 (78.66%), Query Frame = 0


Query: 5   GVTYEDFEPFCQWKRLDDSDV--LEVHLPEFKKEELRVRISNNALLTVSGERLKANDPKK 64
            V+YE+FEPFC+WK+LDDSDV  LEVHLPEFKKEELRVRI NN++L +SGE L AND KK
Sbjct: 8   NVSYEEFEPFCKWKKLDDSDVHVLEVHLPEFKKEELRVRIKNNSILAISGEHL-ANDGKK 67

Query: 65  IKFNREFKLSKDIYPDQIRAKFGSSVLSITMPKK-ASAGVGKPEAGVSNSEGKRTADSDN 124
           ++FNRE KL KDIYPDQIRAKFG SVLSITMPKK +SA   KP+A  + SEG  TA +D+
Sbjct: 68  MQFNREIKLPKDIYPDQIRAKFGGSVLSITMPKKPSSAESSKPKADAA-SEGNDTAPNDD 127

Query: 125 DKPKNFIS---SRFSRLKLSKQTAAAMAVAAVILALGAYYLTKN 162
            KPKN IS   S  SRLK SK+ A A+A A VILA GAYYL KN
Sbjct: 128 GKPKNLISRLTSPLSRLKFSKKKATALAAAVVILAFGAYYLIKN 169

[Close]

BLAST of MC03g1342 vs. TAIR 10
Match: AT1G54400.1 (HSP20-like chaperones superfamily protein )

HSP 1 Score: 84.7 bits (208), Expect = 7.3e-17
Identity = 57/164 (34.76%), Postives = 88/164 (53.66%), Query Frame = 0


Query: 8   YEDFEPFCQWKRLDDSDVLEVHLPE-FKKEELRVRISNNALLTVSGERLKANDPKKIKFN 67
           Y++ EPFC+W+R +D D+LE+HLP   KKE L+++I+N+ +LT++G     +  K I+F 
Sbjct: 13  YDEIEPFCRWRRTEDIDILELHLPSGLKKEHLKIQINNSGVLTITG-GCPVDQTKTIRFM 72

Query: 68  REFKLSKDIYPDQIRAKFGSSVLSITMPK--KASAGVGKPEAGVSNSEGKRTADSDNDKP 127
           +E K++KD   ++IRAKF   VL +TMPK    +AG+     G +        D      
Sbjct: 73  KETKVAKDCKRNEIRAKFSKGVLYVTMPKTIPIAAGLSVSLKGATPQHQTPKTDEGMRNV 132

Query: 128 KNFISSRFSRLKLSKQ----------TAAAMAVAAVILALGAYY 159
            N  S  +S+    KQ           AA + VAA +L +   Y
Sbjct: 133 ANCSSEFYSKFGSLKQRLWRKTVVEGVAAVVVVAAAVLGVVKAY 175

[Close]

BLAST of MC03g1342 vs. TAIR 10
Match: AT5G04890.1 (HSP20-like chaperones superfamily protein )

HSP 1 Score: 65.1 bits (157), Expect = 6.0e-11
Identity = 35/93 (37.63%), Postives = 58/93 (62.37%), Query Frame = 0


Query: 5   GVTYEDFEPFCQWKRLDDSDVLEVHLPEFKKEELRVR-ISNNALLTVSGERLKANDPKKI 64
           GV YEDF P  +WK   ++ +L + L  F KE+++V  + ++ ++ V+GER  AN  K  
Sbjct: 13  GVQYEDFVPKSEWKDQPEATILNIDLTGFAKEQMKVTYVHSSKMIRVTGERPLAN-RKWS 72

Query: 65  KFNREFKLSKDIYPDQIRAKFGSSVLSITMPKK 97
           +FN  F + ++   D+I   F ++VL+ITMPK+
Sbjct: 73  RFNEVFTVPQNCLVDKIHGSFKNNVLTITMPKE 104

[Close]

BLAST of MC03g1342 vs. TAIR 10
Match: AT2G27140.1 (HSP20-like chaperones superfamily protein )

HSP 1 Score: 63.2 bits (152), Expect = 2.3e-10
Identity = 32/93 (34.41%), Postives = 53/93 (56.99%), Query Frame = 0


Query: 8   YEDFEPFCQWKRLDDSDVLEVHLPEFKKEELRVRISNNALLTVSGERLKANDPKKIKFNR 67
           Y++FEP   WK     + L ++LP F+KE+L+V+++    L V G+R  A   K I+F +
Sbjct: 14  YDEFEPLSNWKTEQGFEALTIYLPGFRKEQLKVQVTTTRKLRVMGDR-PAGANKWIRFRK 73

Query: 68  EFKLSKDIYPDQIRAKFGSSVLSITMPKKASAG 101
           EF +  +I  D + AKF  + L + +P+    G
Sbjct: 74  EFPIPPNIDVDSVSAKFEGANLVVRLPRTEPMG 105

[Close]

BLAST of MC03g1342 vs. TAIR 10
Match: AT1G07400.1 (HSP20-like chaperones superfamily protein )

HSP 1 Score: 59.3 bits (142), Expect = 3.3e-09
Identity = 31/93 (33.33%), Postives = 55/93 (59.14%), Query Frame = 0


Query: 17  WKRLDDSDVLEVHLPEFKKEELRVRISNNALLTVSGERLKANDPKKI----------KFN 76
           WK   ++ V +  LP  KKEE++V I ++++L +SGER    + K+           +F+
Sbjct: 52  WKETAEAHVFKADLPGMKKEEVKVEIEDDSVLKISGERHVEKEEKQDTWHRVERSSGQFS 111

Query: 77  REFKLSKDIYPDQIRAKFGSSVLSITMPKKASA 100
           R+FKL +++  DQ++A   + VL++T+PK   A
Sbjct: 112 RKFKLPENVKMDQVKASMENGVLTVTVPKVEEA 144

[Close]

BLAST of MC03g1342 vs. TAIR 10
Match: AT1G59860.1 (HSP20-like chaperones superfamily protein )

HSP 1 Score: 57.8 bits (138), Expect = 9.6e-09
Identity = 29/89 (32.58%), Postives = 53/89 (59.55%), Query Frame = 0


Query: 17  WKRLDDSDVLEVHLPEFKKEELRVRISNNALLTVSGERLKANDPKKIK----------FN 76
           WK   ++ V +  LP  KKEE++V I ++++L +SGER    + K+            F+
Sbjct: 50  WKETAEAHVFKADLPGMKKEEVKVEIEDDSVLKISGERHVEKEEKQDTWHRVERSSGGFS 109

Query: 77  REFKLSKDIYPDQIRAKFGSSVLSITMPK 96
           R+F+L +++  DQ++A   + VL++T+PK
Sbjct: 110 RKFRLPENVKMDQVKASMENGVLTVTVPK 138

The following BLAST results are available for this feature:

BLAST of MC03g1342 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
D9UBX6	8.4e-10	37.63	Inactive protein RESTRICTED TEV MOVEMENT 2 OS=Arabidopsis thaliana OX=3702 GN=RT...	[more]
D9UBX4	8.4e-10	37.63	Inactive protein RESTRICTED TEV MOVEMENT 2 OS=Arabidopsis thaliana OX=3702 GN=RT...	[more]
Q9M670	8.4e-10	37.63	Protein RESTRICTED TEV MOVEMENT 2 OS=Arabidopsis thaliana OX=3702 GN=RTM2 PE=1 S...	[more]
D5K211	1.1e-09	37.63	Inactive protein RESTRICTED TEV MOVEMENT 2 OS=Arabidopsis thaliana OX=3702 GN=RT...	[more]
D9UC01	1.4e-09	37.63	Inactive protein RESTRICTED TEV MOVEMENT 2 OS=Arabidopsis thaliana OX=3702 GN=RT...	[more]

BLAST of MC03g1342 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022137119.1	6.98e-106	100.00	16.9 kDa class I heat shock protein 3 [Momordica charantia]	[more]
XP_008465577.1	5.47e-63	68.48	PREDICTED: 16.9 kDa class I heat shock protein 1 [Cucumis melo] >KAA0036046.1 16...	[more]
XP_023001660.1	8.84e-63	68.29	17.8 kDa class I heat shock protein-like [Cucurbita maxima]	[more]
XP_023520341.1	3.47e-62	69.51	17.8 kDa class I heat shock protein-like [Cucurbita pepo subsp. pepo]	[more]
XP_022923784.1	1.63e-60	68.90	17.8 kDa class I heat shock protein-like [Cucurbita moschata] >KAG6584432.1 17.8...	[more]

BLAST of MC03g1342 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1C6B8	3.38e-106	100.00	16.9 kDa class I heat shock protein 3 OS=Momordica charantia OX=3673 GN=LOC11100...	[more]
A0A5D3BHU7	2.65e-63	68.48	16.9 kDa class I heat shock protein 1 OS=Cucumis melo var. makuwa OX=1194695 GN=...	[more]
A0A1S3CP71	2.65e-63	68.48	16.9 kDa class I heat shock protein 1 OS=Cucumis melo OX=3656 GN=LOC103502934 PE...	[more]
A0A6J1KLT1	4.28e-63	68.29	17.8 kDa class I heat shock protein-like OS=Cucurbita maxima OX=3661 GN=LOC11149...	[more]
A0A6J1E7D1	7.91e-61	68.90	17.8 kDa class I heat shock protein-like OS=Cucurbita moschata OX=3662 GN=LOC111...	[more]

BLAST of MC03g1342 vs. TAIR 10


Match Name	E-value	Identity	Description
AT1G54400.1	7.3e-17	34.76	HSP20-like chaperones superfamily protein	[more]
AT5G04890.1	6.0e-11	37.63	HSP20-like chaperones superfamily protein	[more]
AT2G27140.1	2.3e-10	34.41	HSP20-like chaperones superfamily protein	[more]
AT1G07400.1	3.3e-09	33.33	HSP20-like chaperones superfamily protein	[more]
AT1G59860.1	9.6e-09	32.58	HSP20-like chaperones superfamily protein	[more]

InterPro

Analysis Name: InterPro Annotations of Bitter gourd (Dali-11) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR008978	HSP20-like chaperone	GENE3D	2.60.40.790		coord: 2..99 e-value: 6.5E-18 score: 66.6
IPR008978	HSP20-like chaperone	SUPERFAMILY	49764	HSP20-like chaperones	coord: 7..99
IPR002068	Alpha crystallin/Hsp20 domain	PFAM	PF00011	HSP20	coord: 18..99 e-value: 3.7E-10 score: 39.9
IPR002068	Alpha crystallin/Hsp20 domain	PROSITE	PS01031	SHSP	coord: 5..111 score: 17.318604
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 95..125
None	No IPR available	PANTHER	PTHR43670:SF10	HSP20-LIKE CHAPERONES SUPERFAMILY PROTEIN	coord: 6..159
None	No IPR available	CDD	cd06464	ACD_sHsps-like	coord: 21..95 e-value: 2.88487E-17 score: 70.2756
IPR045045	Small heat shock protein RTM2-like	PANTHER	PTHR43670	HEAT SHOCK PROTEIN 26	coord: 6..159

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
MC03g1342.1	MC03g1342.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
cellular_component	GO:0016021	integral component of membrane