MC03g1250 (gene) Bitter gourd (Dali-11) v1

Overview


Name	MC03g1250
Type	gene
Organism	Momordica charantia cv. Dali-11 (Bitter gourd (Dali-11) v1)
Description	Cleavage stimulation factor 50 kDa subunit
Location	MC03: 18443883 .. 18452277 (+)
RNA-Seq Expression	MC03g1250
Synteny	MC03g1250

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSpolypeptideutr3

Hold the cursor over a type above to highlight its positions in the sequence below.

CTGATCTTTTTCTTTGTTTTTCTAGTGGCTTACGACTCGCTGGACCCGAATGGAAACATTGAAATCAAATGGGATGTCATGTATTGGACTGCAGATGGTTACGGGGTAAGTCTCTTCTTTAATAGGCAGCTGCAACTATATTCTACTATAGCAGCTATCTCCAACTTAATCGAATCGGGATTGGAACATGTTCTTCTGTTAGGTACCCGAATACAAGAACCTAACAAGAACACTATAATGCAATACCAAAGAATAATTACATGTACCGATAGCCTTTCGAGAGGGCTATCTCTCTCCCAAAGAACTCTCCCAAGTTCCTTACCAAAATACAATTCTCCAAGATATCCTTCTCCTCTCCCTCCTACTCCTATTCATAACAAACTCACCCTAATCTAATTACCATAATACCCCTTCACTAACAACTAATAATATTCTCCTATACCCCTAATAGGACTCTCACATCTTCATCTTGAATCGTAACAATACTAAACTTGGAATAAAAATTATAAAATACAGATTCAAACAAGAGCTCAAAGTGAACACAATTCTTTTTTTTTTTTTTTTTTAATGAAATATGGTTGGGTTGATGAGTAATGTGCTACAACAAATAACATCATACTTCCAGGCAACGGTGACGATAACCAACTATCAGATGTATCGACATATCATGAGCCCAGGATGGACTTTGGGATGGGTATGGGCAAAGAAAGAGGTCATCTGGTCCATACAAGGAGCTGAAGCTACTGATCAAGGAGATTGTTCCACATTTGGAGAAACTATACCACACAGTTGCAAAAGAGATCCAACAGTAGTTGACTTGCTTCCAGGTGTTCCTTACAACAAACAGGTCGCTATGTGCTGCAAAGGTGGTGTTTTGGCATCTTGGGGACAAGATCCTTCATCTGCTGTGTCTTCCTTTCAGTTGACTGTTGGTCACTCTGGTAGTTCAAATACAACAGTGAAACTTCCCAAGAATTTCACCCTGTATGGTCCAGGGCTAGGTTACACATGTGGCCAGGCAAAGATTGCTCCGAAGTCAGCTTTCTACTCATCTGATGGTCGTCGAAAAACTTATGCATTGAGTAAATATCATAACTGCACCAAACTATAAAAAAAATATCCATGTTTTATGTGCACTTACTGCTAGTGAACTCCAAAGGTAGGGAGAATTCATGAGAATTTTGAAAGGGATGAGAGATCTACCACAAGTTATTTTTCCACATTATCACATTTCAATAGCCTCCCATCATACAACTCCCTTTTGTTTCTTTTTTTTTTTTTTTTTGCAGTGACTTGGAATGTGATATGCACTTACTCGCAGTTCCTTGCTTCTGAAACGCCAACCTGCTGTGTCTCCATGTCATCCTTCTATAACTCCAAAATCACTCCTTGTAAAGCATGTGCTTGTGGCTGCCAACGCAAGATGGAATGTATCTTGTAAGAATGCACACCTTTTTAATCCCTCTTCAAATTGTCCGTTAATAGCTATTCAGCAATCATTTGGAGTGGAGCCTGATGCAGGGGCGAATCAGATCTTCAAAGCGTTACGGGATCGAATGCACCTACAAATGATACTACTCCATTGCTGCAGTGCACGGGACATAACTGTCCGACTCAAGTTCACTGGCATGTTAAGGAGAATTACAAGGGATATTGGCGGGTGAAGATAACTATCAGCAATCTCAACTATGGACTTAACTATTCACAATGGACTCTTGTCGTCCAGCACCCCAATTTCAACAACACAATGGAGGTTTATAGCTTTGTCTACAAGCCACTCACCCCCTTCATCTCTGAGAGTATGTATCTTAACTCTATACAATTAGCTCATACTTGGCTACAAAATTAACCTCATTGGATAGATATTTTCTTGGTCATTCACTTGGATTTTCTTTCTTTTTTACGTGCAGATGACACAGCTCTGTTCTACGGCTTCAAATATGTCAATGATGTGCTGCTACAAGCAGGGCCAAATGGAAACGTTCACTCAGAGATGATTCTTCAGAAGGATTCAACATTTACATTTGAACAGGGTTGGGCTTTCCCTCGAAAAGTTTACTTTGATGGTGATGAATGTGTGATGCCCTTTCCTGATTCTTACCCCTTCCTGCCCAATTCAGCCAATGCAAATCCAATTCTATTGTCAACACTAGCTTGCATTTTGCTTCCTATATTCCTTATAGTATTATCTTAGAACTGAAGTTCCGCAGGAAGGATAGAAGATCAGTTCCATTTCCCAGGAAAGTATAATCCGGTCCAATAGAACTTGGATCCAATTTTTAGTACAATGTGTGGAGGAGAGGTTTCGAAGTCACAACTTCTCAGTTCGAGTTAGGTGCCAATTATCGCTGAGTATGACAAAACTTTGATCCAATTATATTTTCAATAGTAGGAAATCAGAATTATGTACTTCTTGAAATTTCATTGTATGTGAAAATCGATTGATTTCATTACTTCAAGCCACTCTCAAGTTACTAGCAAACAATCACATCGCAAAAAATTGAAGTCGAAAACTCAAATTCATGATTCAAACTAGCAAACAATGAGTTGTTTAATAGCAGTAAGTTAAACCAGTTTTACGTTTAACTAGAGTTCAGATTTTAGAAGCGTAACAATAATCCTAACAAACTACAAACCAGACGCAGAATGGAGAATCAGAAACTCGCAAATGCCAAAATGAAGCAGAGAAAATTTCCCAGAAAATCGAGAGAGCAAAGTAGCATGAGCTTCCGAAGCATAAATCTTACCTCATCAAATCTAAGGGAAAAACAATTAATGGGTAGCCCTCGTTTTTGCCATCGCAGAAGTCACATTTTTCTCCGTTGAATGAAGCAGCAGAGGCACCGAAGCAGAAAAAATCGTAGCTTGGCAATGGTAGAGCGAGAGTTGAAAGTAAATAACGAGAATGCCACTGCTTGTGCTTGGTCTCGGTTCATCCAACACTGGATTGAACCGAGATGCACTGATTCAATTGAACCGACAGATCCTCCACTCCAAACCTAAATTTCAATTCTAAACAATCTCCAGAATATAGGGTCTTCGTGGACCGGGTTATTTTTTAGACCCAATTCAATTTATTGGGTTGTAAATTTATACAACTAAAATAATCTTTTATTAAATCGTAAATTCAACCACATCATAAATATTTTGAGTTGGATTTCTTCGAGTTATTCAAGTCACTCATTTAAAGTATTGTATAAGAAAAAATACTAATACCTTAAAATTTTATTTACACGTTATATAATATTGAGTAAAATCCTTTTGTCGATGTTTAAATATGTGGCGATAAAATTTATTTCAAAAACTTTAAATTTTGTTTTTTTTTAATAAAAACATTTACTCATACAAAAAAGACAAACATTTAAAATTTTGTTTCAAAAGTCGTCCTAAAGTAATATCTAAATATTTTAAGTGAACTTTGAACAAACTCATTTTACAAAATTTTTATTTATTTAATTTCAGACCCAATCAAAACAAGTTTATAATTCAACCCAAACCAATATGAATTATGTTGGATTCATCGAATTTTTTTTGGGGTGATCGAATATTTTCCGAACATCCCTACCATCGTAATTGTAAATTTACGATGAAAATCCCATAGTCCCGAATTTACAATTTCTCTAATAAGACGTTTTTCTATTTCGTATTCATCTTCAATTTTCTAAAACCACAACATGCCTCTGTGCCTATGACTATAAGAAAACAAAACATATATTTCTTCTGATGGGGCTCTGAACAGTGGAATTTGCCAAAGTACAGTGGAACAGGGAGTTATAATAGAGGGTGCTGAACTGAAGAGCGGTGGTGACGCTGCTTCATAGGAGATGGAAGGCAGCTTCGAACAGACCCTACAAGATGGGAAGCTTTATAGGCAACTCAATTCTCTCATCGTTGCTCATCTTCGCGACCACAACCTCACCCAGGCAAGCTTTTCCTCTTCTGGGTCAACTCATTTTAGGTTTTGTTTCTTGATTTTGGTCTCTGTTTCCATTTGCTGAGAAAAATATTATTGAAGCTATCAAAAGGAAGTAATTTTGTGTTGGTACTTGAGGGAACAGTATTATATAAGTTATAAAACTATGGTATTTTACTTAGGCTGCAAGTGCTGCTGCTTCTGCGACAATGACGCCTCTGAATGTTGATGTCCCGCGTAATAAACTTATGGAGCTTGTTGCAAAGGTCTGAATTTGCTTCCTAGAATCTCTCTCTCTGCCCCCTTTCAGCCCTTTTGAGTTTGGGGTTGCTTACTGGGCGTTTCTGTATTAAGGTGATACCAGGGTCTTGCGGTGGAGAAAGATGAGACGTTAAGGGGGAATTCTGCTTCTGCATTGTACGAATTTGGTTCATCGGTGCCCACTTCATATGGGTCTGCACTGGCCTCTCGTACTTCTGCCATCGACTTCAGGTTGTAAAGCTTTTACAAATGAGCTATAAGTCTTGATTATCTAGGGGCTTAAATGTGTCCTTCATTCGAGTTTCATGTATAGGACTTATGAATTGAAAAGCAGAGGAACTTCAATAACCTTCTCTTTCTTCTTCTTTTTGGTTCCTCCATACAGCGCTGTGCAGGATACAAAAGGGTCATCGAAGAATTTTCCAAAGCATGAGACTCGACATCTTTCGGAACATAAGGTGATTAATCTAAAAGTAACACTTTCTTTATATTGTTAGACGCTCGTTGAAAATTTGGTAAACTCTTGTTAAAGTTTGGCATTGGTAAGGCTTAGATTTTGAGAGAAAGATGACCCTCTTGAAAGGATATCATACTTGTACTTGGTATTATACTTGTTTTCAATAGCATGATCTCGTTTTGCTGGACAGAATCTATCGATTATGGTATGCCGTATGCATATTAGATATATATTAGACTGGAGGAATAGATTTATAATATTGTCATATTTACTGCATCTGTTTATGTACGGTTGGGTCTGATTGTTGTATCTTCTTGCTGGGCTTATGGCTTAAACTTGTCTAGAATGTTGCCAGATGTGCAAGGTTCAGTCCTGATGGGAGATTTGTTGCCACTGGAAGTGCGGATATGTCAATAAAGCTGTTTGAGGTATTGATGCTTTACCTTAAAGTTACTCGATGGGATACTTCAATCAATATGGAATCTGACTAACAAGCCATTTTTCCTCATAAGGTGGCAAAGATCAAGCAAATGATGCTGCCAGATGCAAAAGATGGTCCTGTCCGACCTGTTATAAGGACGTTTTATGATCACATTCAAGTTAGTCCATCACATTCATAAAATCAATACACTATGCTGATAGTTTTTTCCTTCCGGAGATTTTTCTTCATCTTAAAGTTTTCACCCTCAAGTTGGTCATTATCACCATGGATAGTTTATCTTGTATCAGTAATAGGGTTTTAGTTCTTTACACTGTTCTTTTCTTCATCATTATTCTAACTTCACGTATGTTGCCGTATTATCAATAAGATTTTTCTTCTCCATCATTGTAGTGGCGAGAGATTTCTCCCCTTTCTACTCCACTGATAAGTGATATCTGATACTTTCTCCTAATTATTTGCAGCCAATAAATGATTTGGATTTTCATCCTCAGAATACTGTTCTTATATCTGGTGCAAAAGATCACACAATAAAGTATGGTTCTTTCTTGATCCTGTTGTGTCTGAGGTCATATGCACGAGCATATAGCTCCGTACCTTATTATTGTCATTAGTATTATTTCATTTGCGATTACCAAATTTCTAAATGTGATCAAGAATTTCTAAATGTGATCAAGAAGTCATGTCTGTCTTCTGCCATCTGTAAGCTTATAGTTCTATTTCTGAAGATACCTACTCTATTGGTAAATAAAGTACAGCTAATCTTGCAATTTCGTACAATGCGTTTGCTTTTCTAGATTCTTTGACTTCTCCAAATTGACTGCAAAGAAAGCATTCAGAGTTATCCAGGTTTTGCTTGTATCTTAATTTTTATTTTTGTCTGCAGCTTTCAAATCCTGCAGCAGATTTTACTTCTTTTTATTCAGAAGGCATTCTCTTACATTTTTCCTTTTTCCTCTGTTTGTCATTAAGGATACCCATAACGTGCGTTCTATATCTCTTCATCCCTCAGGAGATTATCTTTTAGCAGGTATCGTCTTCTTCCTCTACATTAAGTGATATATTAACTGTTTTAAGCATTCTAATATTTGAAAGCATGCAAGTACTTATTGTTTGTTGTTAAAAATTAATTAAATTGCATTGTAACTTAAACTTGAGTTCTATTGGAAAGCTTTAGCTTTCCCTCCCGTTTCACTGACTTTTATTTTGATGAAAAGACTTCCATTAAAAAGGAACGAAACATTGCAATAGAGGGCTGGATGAGCAAGCTATCCACCCACCAAAACCAACAACTCGGTTTTGGCTTTGCTTTTGGTCCTACTCATACAGCCATACTGGCTCTGTCCGAGTTTCACCACAACTATCTATAGTCTCTAGACCTAAATTTAATGAAACCAAATAAGGGGCCTCATTTTACCTCAAGGGGCTAGTCACTGACATGGGCAAAAACTCCAGGAACGGATCATCCCATTGCCCACCTATATGATGTCAATACTTTTCAGTGCTTTCTATCTGCAAATGTTCCGGAAATAGGAAGTAATGGAGCCATAAATCAGGTGCTATGAACTTGACTTTTCAAATTATCTGCAATACAAATCCTATTAGATGGAACTCTCACAGTTCAAGCTTTCCAATGATCATCATACAGGTCAGGTATTCAGCAACAGGTAGTATGTATGTCACTGCTTCAAAGGATGGTGCGGTTCGTTTATGGGATGGAGTTAGTGCTAAATGTATCCGCCTAATCGCCAGTGCACATGCCGCAGCTGAGGCAACCAGTGCAAAATTTACAAAAGATGAAAGGTAAGCTTGCAATAGTGGCTGTAAACTCTTAACAATTTTATCAGTGTAGCCGCAATCATAATGGTTTGTCAAGTATATAGAAGTTTCTGTTGAAATGGTGCAACAATCTTTCACTTAATTGATTTACTTTCAGACAATCAGTGACTTGAAAAGTATACTAAGAGAGAACATATTGAATCTTTTTATTGGTTTCTGGAGTTCTTCTCAGTGACTTGATCATCGATACCTCAGGTTCGTTCTTTCTTGTGGGAAGGACTCCACTGTAAAGCTTTGGGATGTGGGGACGGGGAGACTGGTCAAACAATATGTTGGAGCTACCCATATGCAATTGAGATGTCAGGTCAGTTGAGGGTTTCATTTCAAATGGCTTTTTTTTGCTTTATGTCATCTGTCAATTAACTTGCATCTTTATGACATTTTCATGGTTCTAGTTATGGTTGAAAACCGTAAATGTTGCCTCATGCTTCAGTTCGACGAAAAGCCTTTATATTGGTTCTTATAAAGTTCACCAGCTCCTGAGATTTACCAAAACTGGGACTACAATCTGCATGTATATTTGAAAATCTTTTAGCCCCTTGATATTGAAACTATGGTACACAAACCCAATCCCAAACCCAAAACCCAAGTTTCTATGATCTATTCTTTAAAGAAAATACTCAATATTGTAATAGCAAGATTCTGATGAACAACCGTTCTCATTTCCATCTGAAAGTTTCAATCTTTTTCTTATTAGGCTGTCTTCAATGATACTGAGGAATTTGTGCTATCGATAGACGAGCCGAGCAATGAGGTAGATCCTGCTTCTGTTTTCACTCCTCAAAACTGTGACATTGATGTTCTTTGCTAGCCTATGTTTTGGATCTGAATTGATAAGATTTGAATGTTTGTAGATCGTTATTTGGGATGCTCTGACAGCAGAGAGAGTAGCAAGGTGGCCCTCGAACCACGTTGGCGTGCCCCGGTGGCTCGAGCACTCACCAACAGAGTCGGCCTTCATTTCCTGCGGGACCGATAAATCGATACGCTTTTGGAAGGAATCCCTCTAGTCTCCAGTCTCCAGTCTCCAGTCTCCAGTACAGAGAAAAGAATGAGGATTGTTCCATCATCCAATCCAAGATGGACTGAATAATGCGTGAAATAGGCAAAGATTAAATCTTGATCACTACTCTATTTCATGAATTCTTGAAAAGAGATGGAAAAGCCTCCTTGCTGTGATGGGCCCTCACTCTCTATTTAATCAATGGGCCAAAGCCCAGTAAGTCAGGGCTATGTGGGCTTTGACAGTATAAATGGCCAAGGCCCAATAATTATTTTGATTTGCACATTCAACTCATGAAGGTCAAGGACCTCTTAGTAATCTGAATTAAATTTAGAAACTACTTTTTTTTTCCTTAAACTATGTATACTGTTTAACTATTAAAGCAAGTTACAGGGGGCCCATCACACTAAAACATGTTCATCTTATTGTCATTTTCAATAGCAAAAAATTAAGTACATGTCTTGTCTGCATTGAATAATCTAC

mRNA sequence

CTGATCTTTTTCTTTGTTTTTCTAGTGGCTTACGACTCGCTGGACCCGAATGGAAACATTGAAATCAAATGGGATGTCATGTATTGGACTGCAGATGGTTACGGGGCAACGGTGACGATAACCAACTATCAGATGTATCGACATATCATGAGCCCAGGATGGACTTTGGGATGGGTATGGGCAAAGAAAGAGGTCATCTGGTCCATACAAGGAGCTGAAGCTACTGATCAAGGAGATTGTTCCACATTTGGAGAAACTATACCACACAGTTGCAAAAGAGATCCAACAGTAGTTGACTTGCTTCCAGGTGTTCCTTACAACAAACAGGTCGCTATGTGCTGCAAAGGTGGTGTTTTGGCATCTTGGGGACAAGATCCTTCATCTGCTGTGTCTTCCTTTCAGTTGACTGTTGGTCACTCTGGTAGTTCAAATACAACAGTGAAACTTCCCAAGAATTTCACCCTGTATGGTCCAGGGCTAGGTTACACATGTGGCCAGGCAAAGATTGCTCCGAAGTCAGCTTTCTACTCATCTGATGGTCGTCGAAAAACTTATGCATTGATGACTTGGAATGTGATATGCACTTACTCGCAGTTCCTTGCTTCTGAAACGCCAACCTGCTGTGTCTCCATGTCATCCTTCTATAACTCCAAAATCACTCCTTGTAAAGCATGTGCTTGTGGCTGCCAACGCAAGATGGAATGTATCTTCTATCAAAAGGAAGTAATTTTGTGTTGGTACTTGAGGGAACAGTATTATATAAGTTATAAAACTATGGTATTTTACTTAGCAAGTGCTGCTGCTTCTGCGACAATGACGCCTCTGAATGTTGATGTCCCGCGTAATAAACTTATGGAGCTTGTTGCAAAGGGTCTTGCGGTGGAGAAAGATGAGACGTTAAGGGGGAATTCTGCTTCTGCATTGTACGAATTTGGTTCATCGGTGCCCACTTCATATGGGTCTGCACTGGCCTCTCGTACTTCTGCCATCGACTTCAGCGCTGTGCAGGATACAAAAGGGTCATCGAAGAATTTTCCAAAGCATGAGACTCGACATCTTTCGGAACATAAGAATGTTGCCAGATGTGCAAGGTTCAGTCCTGATGGGAGATTTGTTGCCACTGGAAGTGCGGATATGTCAATAAAGCTGTTTGAGGTGGCAAAGATCAAGCAAATGATGCTGCCAGATGCAAAAGATGGTCCTGTCCGACCTGTTATAAGGACGTTTTATGATCACATTCAACCAATAAATGATTTGGATTTTCATCCTCAGAATACTGTTCTTATATCTGGTGCAAAAGATCACACAATAAAATTCTTTGACTTCTCCAAATTGACTGCAAAGAAAGCATTCAGAGTTATCCAGGATACCCATAACGTGCGTTCTATATCTCTTCATCCCTCAGGAGATTATCTTTTAGCAGGAACGGATCATCCCATTGCCCACCTATATGATGTCAATACTTTTCAGTGCTTTCTATCTGCAAATGTTCCGGAAATAGGAAGTAATGGAGCCATAAATCAGGTCAGGTATTCAGCAACAGGTAGTATGTATGTCACTGCTTCAAAGGATGGTGCGGTTCGTTTATGGGATGGAGTTAGTGCTAAATGTATCCGCCTAATCGCCAGTGCACATGCCGCAGCTGAGGCAACCAGTGCAAAATTTACAAAAGATGAAAGGTTCGTTCTTTCTTGTGGGAAGGACTCCACTGTAAAGCTTTGGGATGTGGGGACGGGGAGACTGGTCAAACAATATGTTGGAGCTACCCATATGCAATTGAGATGTCAGGCTGTCTTCAATGATACTGAGGAATTTGTGCTATCGATAGACGAGCCGAGCAATGAGATCGTTATTTGGGATGCTCTGACAGCAGAGAGAGTAGCAAGGTGGCCCTCGAACCACGTTGGCGTGCCCCGGTGGCTCGAGCACTCACCAACAGAGTCGGCCTTCATTTCCTGCGGGACCGATAAATCGATACGCTTTTGGAAGGAATCCCTCTAGTCTCCAGTCTCCAGTCTCCAGTCTCCAGTACAGAGAAAAGAATGAGGATTGTTCCATCATCCAATCCAAGATGGACTGAATAATGCGTGAAATAGGCAAAGATTAAATCTTGATCACTACTCTATTTCATGAATTCTTGAAAAGAGATGGAAAAGCCTCCTTGCTGTGATGGGCCCTCACTCTCTATTTAATCAATGGGCCAAAGCCCAGTAAGTCAGGGCTATGTGGGCTTTGACAGTATAAATGGCCAAGGCCCAATAATTATTTTGATTTGCACATTCAACTCATGAAGGTCAAGGACCTCTTAGTAATCTGAATTAAATTTAGAAACTACTTTTTTTTTCCTTAAACTATGTATACTGTTTAACTATTAAAGCAAGTTACAGGGGGCCCATCACACTAAAACATGTTCATCTTATTGTCATTTTCAATAGCAAAAAATTAAGTACATGTCTTGTCTGCATTGAATAATCTAC

Coding sequence (CDS)

CTGATCTTTTTCTTTGTTTTTCTAGTGGCTTACGACTCGCTGGACCCGAATGGAAACATTGAAATCAAATGGGATGTCATGTATTGGACTGCAGATGGTTACGGGGCAACGGTGACGATAACCAACTATCAGATGTATCGACATATCATGAGCCCAGGATGGACTTTGGGATGGGTATGGGCAAAGAAAGAGGTCATCTGGTCCATACAAGGAGCTGAAGCTACTGATCAAGGAGATTGTTCCACATTTGGAGAAACTATACCACACAGTTGCAAAAGAGATCCAACAGTAGTTGACTTGCTTCCAGGTGTTCCTTACAACAAACAGGTCGCTATGTGCTGCAAAGGTGGTGTTTTGGCATCTTGGGGACAAGATCCTTCATCTGCTGTGTCTTCCTTTCAGTTGACTGTTGGTCACTCTGGTAGTTCAAATACAACAGTGAAACTTCCCAAGAATTTCACCCTGTATGGTCCAGGGCTAGGTTACACATGTGGCCAGGCAAAGATTGCTCCGAAGTCAGCTTTCTACTCATCTGATGGTCGTCGAAAAACTTATGCATTGATGACTTGGAATGTGATATGCACTTACTCGCAGTTCCTTGCTTCTGAAACGCCAACCTGCTGTGTCTCCATGTCATCCTTCTATAACTCCAAAATCACTCCTTGTAAAGCATGTGCTTGTGGCTGCCAACGCAAGATGGAATGTATCTTCTATCAAAAGGAAGTAATTTTGTGTTGGTACTTGAGGGAACAGTATTATATAAGTTATAAAACTATGGTATTTTACTTAGCAAGTGCTGCTGCTTCTGCGACAATGACGCCTCTGAATGTTGATGTCCCGCGTAATAAACTTATGGAGCTTGTTGCAAAGGGTCTTGCGGTGGAGAAAGATGAGACGTTAAGGGGGAATTCTGCTTCTGCATTGTACGAATTTGGTTCATCGGTGCCCACTTCATATGGGTCTGCACTGGCCTCTCGTACTTCTGCCATCGACTTCAGCGCTGTGCAGGATACAAAAGGGTCATCGAAGAATTTTCCAAAGCATGAGACTCGACATCTTTCGGAACATAAGAATGTTGCCAGATGTGCAAGGTTCAGTCCTGATGGGAGATTTGTTGCCACTGGAAGTGCGGATATGTCAATAAAGCTGTTTGAGGTGGCAAAGATCAAGCAAATGATGCTGCCAGATGCAAAAGATGGTCCTGTCCGACCTGTTATAAGGACGTTTTATGATCACATTCAACCAATAAATGATTTGGATTTTCATCCTCAGAATACTGTTCTTATATCTGGTGCAAAAGATCACACAATAAAATTCTTTGACTTCTCCAAATTGACTGCAAAGAAAGCATTCAGAGTTATCCAGGATACCCATAACGTGCGTTCTATATCTCTTCATCCCTCAGGAGATTATCTTTTAGCAGGAACGGATCATCCCATTGCCCACCTATATGATGTCAATACTTTTCAGTGCTTTCTATCTGCAAATGTTCCGGAAATAGGAAGTAATGGAGCCATAAATCAGGTCAGGTATTCAGCAACAGGTAGTATGTATGTCACTGCTTCAAAGGATGGTGCGGTTCGTTTATGGGATGGAGTTAGTGCTAAATGTATCCGCCTAATCGCCAGTGCACATGCCGCAGCTGAGGCAACCAGTGCAAAATTTACAAAAGATGAAAGGTTCGTTCTTTCTTGTGGGAAGGACTCCACTGTAAAGCTTTGGGATGTGGGGACGGGGAGACTGGTCAAACAATATGTTGGAGCTACCCATATGCAATTGAGATGTCAGGCTGTCTTCAATGATACTGAGGAATTTGTGCTATCGATAGACGAGCCGAGCAATGAGATCGTTATTTGGGATGCTCTGACAGCAGAGAGAGTAGCAAGGTGGCCCTCGAACCACGTTGGCGTGCCCCGGTGGCTCGAGCACTCACCAACAGAGTCGGCCTTCATTTCCTGCGGGACCGATAAATCGATACGCTTTTGGAAGGAATCCCTCTAG

Protein sequence

LIFFFVFLVAYDSLDPNGNIEIKWDVMYWTADGYGATVTITNYQMYRHIMSPGWTLGWVWAKKEVIWSIQGAEATDQGDCSTFGETIPHSCKRDPTVVDLLPGVPYNKQVAMCCKGGVLASWGQDPSSAVSSFQLTVGHSGSSNTTVKLPKNFTLYGPGLGYTCGQAKIAPKSAFYSSDGRRKTYALMTWNVICTYSQFLASETPTCCVSMSSFYNSKITPCKACACGCQRKMECIFYQKEVILCWYLREQYYISYKTMVFYLASAAASATMTPLNVDVPRNKLMELVAKGLAVEKDETLRGNSASALYEFGSSVPTSYGSALASRTSAIDFSAVQDTKGSSKNFPKHETRHLSEHKNVARCARFSPDGRFVATGSADMSIKLFEVAKIKQMMLPDAKDGPVRPVIRTFYDHIQPINDLDFHPQNTVLISGAKDHTIKFFDFSKLTAKKAFRVIQDTHNVRSISLHPSGDYLLAGTDHPIAHLYDVNTFQCFLSANVPEIGSNGAINQVRYSATGSMYVTASKDGAVRLWDGVSAKCIRLIASAHAAAEATSAKFTKDERFVLSCGKDSTVKLWDVGTGRLVKQYVGATHMQLRCQAVFNDTEEFVLSIDEPSNEIVIWDALTAERVARWPSNHVGVPRWLEHSPTESAFISCGTDKSIRFWKESL

Homology

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BLAST of MC03g1250 vs. ExPASy Swiss-Prot
Match: Q8L4J2 (Cleavage stimulation factor subunit 50 OS=Arabidopsis thaliana OX=3702 GN=CSTF50 PE=1 SV=1)

HSP 1 Score: 580.1 bits (1494), Expect = 3.2e-164
Identity = 279/404 (69.06%), Postives = 338/404 (83.66%), Query Frame = 0


Query: 263 LASAAASATMTPLNVDVPRNKLMELVAKGLAVEKDETLRGNSASALYEFGSSVPTSYGSA 322
           +ASA ASATMTPLN++VP N+L+ELVAKGLA E + TLRG S+S L      +P+SYGS 
Sbjct: 36  VASAVASATMTPLNIEVPPNRLLELVAKGLAAENNGTLRGVSSSVL------LPSSYGSI 95

Query: 323 LASRTSAIDFSAVQDTKGSSKNFPKHETRHLSEHKNVARCARFSPDGRFVATGSADMSIK 382
              RT++IDFS V   KGSSK  PKHE++ LSEHK+V RCARFSPDG F ATG AD SIK
Sbjct: 96  TTPRTASIDFS-VNHAKGSSKTIPKHESKTLSEHKSVVRCARFSPDGMFFATGGADTSIK 155

Query: 383 LFEVAKIKQMMLPDAKDGPVRPVIRTFYDHIQPINDLDFHPQNTVLISGAKDHTIKFFDF 442
           LFEV K+KQM+  D +    RP+IRTFYDH +PINDLDFHP++T+LIS AKD+ IKFFDF
Sbjct: 156 LFEVPKVKQMISGDTQ---ARPLIRTFYDHAEPINDLDFHPRSTILISSAKDNCIKFFDF 215

Query: 443 SKLTAKKAFRVIQDTHNVRSISLHPSGDYLLAGTDHPIAHLYDVNTFQCFLSANVPEIGS 502
           SK TAK+AF+V QDTHNVRSIS HPSG++LLAGTDHPI HLYDVNT+QCFL +N P+ G 
Sbjct: 216 SKTTAKRAFKVFQDTHNVRSISFHPSGEFLLAGTDHPIPHLYDVNTYQCFLPSNFPDSGV 275

Query: 503 NGAINQVRYSATGSMYVTASKDGAVRLWDGVSAKCIRLIASAHAAAEATSAKFTKDERFV 562
           +GAINQVRYS+TGS+Y+TASKDGA+RL+DGVSAKC+R I +AH  +E TSA FTKD+RFV
Sbjct: 276 SGAINQVRYSSTGSIYITASKDGAIRLFDGVSAKCVRSIGNAHGKSEVTSAVFTKDQRFV 335

Query: 563 LSCGKDSTVKLWDVGTGRLVKQYVGATHMQLRCQAVFNDTEEFVLSIDEPSNEIVIWDAL 622
           LS GKDSTVKLW++G+GR+VK+Y+GA  ++LR QA+FNDTEEFV+SIDE SNE+V WDA 
Sbjct: 336 LSSGKDSTVKLWEIGSGRMVKEYLGAKRVKLRSQAIFNDTEEFVISIDEASNEVVTWDAR 395

Query: 623 TAERVARWPSNHVGVPRWLEHSPTESAFISCGTDKSIRFWKESL 667
           TA++VA+WPSNH G PRW+EHSP ES F++CG D+SIRFWKES+
Sbjct: 396 TADKVAKWPSNHNGAPRWIEHSPVESVFVTCGIDRSIRFWKESV 429

[Close]

BLAST of MC03g1250 vs. ExPASy Swiss-Prot
Match: Q9LFW3 (COBRA-like protein 4 OS=Arabidopsis thaliana OX=3702 GN=COBL4 PE=2 SV=2)

HSP 1 Score: 362.1 bits (928), Expect = 1.4e-98
Identity = 160/244 (65.57%), Postives = 194/244 (79.51%), Query Frame = 0


Query: 3   FFFVFL---VAYDSLDPNGNIEIKWDVMYWTADGYGATVTITNYQMYRHIMSPGWTLGWV 62
           FFF+ +    AYD LDP+GNI IKWD+M WTADGY ATVT+ N+Q+YRHI +PGWTLGW 
Sbjct: 10  FFFMIIFTATAYDPLDPSGNITIKWDIMSWTADGYVATVTMNNFQIYRHIQNPGWTLGWT 69

Query: 63  WAKKEVIWSIQGAEATDQGDCSTFGETIPHSCKRDPTVVDLLPGVPYNKQVAMCCKGGVL 122
           WAKKEVIWS+ GA+ T+QGDCS F   +PH CK+ PTVVDLLPGVPYN+Q + CCKGGV+
Sbjct: 70  WAKKEVIWSMVGAQTTEQGDCSKFKGNVPHCCKKTPTVVDLLPGVPYNQQFSNCCKGGVI 129

Query: 123 ASWGQDPSSAVSSFQLTVGHSGSSNTTVKLPKNFTLYGPGLGYTCGQAKIAPKSAFYSSD 182
            +WGQDPS+AVS FQ++ G +G++N TVKLPKNFTL GPG GYTCG AKI P + F ++D
Sbjct: 130 GAWGQDPSAAVSQFQVSAGLAGTTNKTVKLPKNFTLLGPGPGYTCGPAKIVPSTVFLTTD 189

Query: 183 GRRKTYALMTWNVICTYSQFLASETPTCCVSMSSFYNSKITPCKACACGCQRKMECIFYQ 242
            RRKT ALMTWNV CTYSQFLA + P+CCVS SSFYN  ITPC +CACGC+ K  C+   
Sbjct: 190 KRRKTQALMTWNVTCTYSQFLARKHPSCCVSFSSFYNDTITPCPSCACGCENKKSCVKAD 249

Query: 243 KEVI 244
            +++
Sbjct: 250 SKIL 253

[Close]

BLAST of MC03g1250 vs. ExPASy Swiss-Prot
Match: Q6Z4G7 (COBRA-like protein 6 OS=Oryza sativa subsp. japonica OX=39947 GN=BC1L7 PE=3 SV=1)

HSP 1 Score: 344.7 bits (883), Expect = 2.3e-93
Identity = 150/233 (64.38%), Postives = 185/233 (79.40%), Query Frame = 0


Query: 9   VAYDSLDPNGNIEIKWDVMYWTADGYGATVTITNYQMYRHIMSPGWTLGWVWAKKEVIWS 68
           VAYD LDPNGNI IKWDVM WT DGY A VTI NYQ YR IM+PGWT+GW WA++EVIWS
Sbjct: 20  VAYDPLDPNGNITIKWDVMSWTPDGYVAMVTINNYQTYRQIMAPGWTVGWTWARQEVIWS 79

Query: 69  IQGAEATDQGDCSTFGETIPHSCKRDPTVVDLLPGVPYNKQVAMCCKGGVLASWGQDPSS 128
           + GA+ATDQGDCS F   +PH C+R P VVDLLPGVPYN+Q+A CC+GGVL ++GQ PS+
Sbjct: 80  MVGAQATDQGDCSRFKANLPHCCRRTPAVVDLLPGVPYNQQIANCCRGGVLPAYGQAPSA 139

Query: 129 AVSSFQLTVGHSGSSNTTVKLPKNFTLYGPGLGYTCGQAKIAPKSAFYSSDGRRKTYALM 188
           A ++FQ++VG +G++N TV+LP+NFTL GPG GYTCG+A++ P + F ++D RRKT ALM
Sbjct: 140 AAAAFQVSVGQAGTTNRTVRLPRNFTLLGPGPGYTCGRARVVPSTVFLTADRRRKTQALM 199

Query: 189 TWNVICTYSQFLASETPTCCVSMSSFYNSKITPCKACACGCQRKMECIFYQKE 242
           TWNV CTYSQ LAS+ P+CCVS SSFYN  I PC  CACGC     C+  +++
Sbjct: 200 TWNVTCTYSQHLASKYPSCCVSFSSFYNDTIVPCAKCACGCDAHKPCVRSERD 252

[Close]

BLAST of MC03g1250 vs. ExPASy Swiss-Prot
Match: Q94KT8 (Protein COBRA OS=Arabidopsis thaliana OX=3702 GN=COB PE=2 SV=1)

HSP 1 Score: 339.3 bits (869), Expect = 9.5e-92
Identity = 150/226 (66.37%), Postives = 178/226 (78.76%), Query Frame = 0


Query: 5   FVFLVAYDSLDPNGNIEIKWDVMYWTADGYGATVTITNYQMYRHIMSPGWTLGWVWAKKE 64
           F    AYD+LDP GNI +KWDVM WT DGY A VT+ N+Q YRHI SPGWTLGW WAKKE
Sbjct: 31  FTSTEAYDALDPEGNITMKWDVMSWTPDGYVAVVTMFNFQKYRHIQSPGWTLGWKWAKKE 90

Query: 65  VIWSIQGAEATDQGDCSTFGETIPHSCKRDPTVVDLLPGVPYNKQVAMCCKGGVLASWGQ 124
           VIWS+ GA+ T+QGDCS +   IPH CK+DPTVVDLLPG PYN+Q+A CCKGGV+ SW Q
Sbjct: 91  VIWSMVGAQTTEQGDCSKYKGNIPHCCKKDPTVVDLLPGTPYNQQIANCCKGGVMNSWVQ 150

Query: 125 DPSSAVSSFQLTVGHSGSSNTTVKLPKNFTLYGPGLGYTCGQAKIAPKSAFYSSDGRRKT 184
           DP++A SSFQ++VG +G++N TV++P+NFTL GPG GYTCG AKI   + F ++D RR T
Sbjct: 151 DPATAASSFQISVGAAGTTNKTVRVPRNFTLMGPGPGYTCGPAKIVRPTKFVTTDTRRTT 210

Query: 185 YALMTWNVICTYSQFLASETPTCCVSMSSFYNSKITPCKACACGCQ 231
            A+MTWN+ CTYSQFLA  TPTCCVS+SSFYN  I  C  CACGCQ
Sbjct: 211 QAMMTWNITCTYSQFLAQRTPTCCVSLSSFYNETIVGCPTCACGCQ 256

[Close]

BLAST of MC03g1250 vs. ExPASy Swiss-Prot
Match: Q6Z4G8 (COBRA-like protein 1 OS=Oryza sativa subsp. japonica OX=39947 GN=BC1L6 PE=2 SV=1)

HSP 1 Score: 337.0 bits (863), Expect = 4.7e-91
Identity = 148/234 (63.25%), Postives = 180/234 (76.92%), Query Frame = 0


Query: 1   LIFFFVFLV----AYDSLDPNGNIEIKWDVMYWTADGYGATVTITNYQMYRHIMSPGWTL 60
           L+ FF  L+    AYD LDPNGNI IKWDV+ WT DGY A V++ NYQ YRHI SPGW L
Sbjct: 15  LVAFFSSLIPSSEAYDPLDPNGNITIKWDVLQWTPDGYVAVVSLYNYQQYRHIQSPGWKL 74

Query: 61  GWVWAKKEVIWSIQGAEATDQGDCSTFGETIPHSCKRDPTVVDLLPGVPYNKQVAMCCKG 120
           GWVWAKKE+IW++ G +AT+QGDCS F   IPH CK+DP +VDLLPG PYN Q+A CCKG
Sbjct: 75  GWVWAKKEIIWAMNGGQATEQGDCSKFKSNIPHCCKKDPEIVDLLPGTPYNMQIANCCKG 134

Query: 121 GVLASWGQDPSSAVSSFQLTVGHSGSSNTTVKLPKNFTLYGPGLGYTCGQAKIAPKSAFY 180
           GVL SW QDP++A++SFQ++VG +G++N TV++P+NFTL  PG GYTCG AK+   + F+
Sbjct: 135 GVLNSWAQDPANAIASFQVSVGQAGTTNKTVRVPRNFTLKSPGPGYTCGSAKVVRPTKFF 194

Query: 181 SSDGRRKTYALMTWNVICTYSQFLASETPTCCVSMSSFYNSKITPCKACACGCQ 231
           S DGRR T A MTWNV CTYSQ +A  +PTCCVS+SSFYN  I  C  C+CGCQ
Sbjct: 195 SQDGRRTTQAHMTWNVTCTYSQIVAQRSPTCCVSLSSFYNDTIVNCPTCSCGCQ 248

[Close]

BLAST of MC03g1250 vs. NCBI nr
Match: XP_022137259.1 (cleavage stimulation factor subunit 50 [Momordica charantia])

HSP 1 Score: 803 bits (2075), Expect = 2.22e-288
Identity = 403/403 (100.00%), Postives = 403/403 (100.00%), Query Frame = 0


Query: 264 ASAAASATMTPLNVDVPRNKLMELVAKGLAVEKDETLRGNSASALYEFGSSVPTSYGSAL 323
           ASAAASATMTPLNVDVPRNKLMELVAKGLAVEKDETLRGNSASALYEFGSSVPTSYGSAL
Sbjct: 35  ASAAASATMTPLNVDVPRNKLMELVAKGLAVEKDETLRGNSASALYEFGSSVPTSYGSAL 94

Query: 324 ASRTSAIDFSAVQDTKGSSKNFPKHETRHLSEHKNVARCARFSPDGRFVATGSADMSIKL 383
           ASRTSAIDFSAVQDTKGSSKNFPKHETRHLSEHKNVARCARFSPDGRFVATGSADMSIKL
Sbjct: 95  ASRTSAIDFSAVQDTKGSSKNFPKHETRHLSEHKNVARCARFSPDGRFVATGSADMSIKL 154

Query: 384 FEVAKIKQMMLPDAKDGPVRPVIRTFYDHIQPINDLDFHPQNTVLISGAKDHTIKFFDFS 443
           FEVAKIKQMMLPDAKDGPVRPVIRTFYDHIQPINDLDFHPQNTVLISGAKDHTIKFFDFS
Sbjct: 155 FEVAKIKQMMLPDAKDGPVRPVIRTFYDHIQPINDLDFHPQNTVLISGAKDHTIKFFDFS 214

Query: 444 KLTAKKAFRVIQDTHNVRSISLHPSGDYLLAGTDHPIAHLYDVNTFQCFLSANVPEIGSN 503
           KLTAKKAFRVIQDTHNVRSISLHPSGDYLLAGTDHPIAHLYDVNTFQCFLSANVPEIGSN
Sbjct: 215 KLTAKKAFRVIQDTHNVRSISLHPSGDYLLAGTDHPIAHLYDVNTFQCFLSANVPEIGSN 274

Query: 504 GAINQVRYSATGSMYVTASKDGAVRLWDGVSAKCIRLIASAHAAAEATSAKFTKDERFVL 563
           GAINQVRYSATGSMYVTASKDGAVRLWDGVSAKCIRLIASAHAAAEATSAKFTKDERFVL
Sbjct: 275 GAINQVRYSATGSMYVTASKDGAVRLWDGVSAKCIRLIASAHAAAEATSAKFTKDERFVL 334

Query: 564 SCGKDSTVKLWDVGTGRLVKQYVGATHMQLRCQAVFNDTEEFVLSIDEPSNEIVIWDALT 623
           SCGKDSTVKLWDVGTGRLVKQYVGATHMQLRCQAVFNDTEEFVLSIDEPSNEIVIWDALT
Sbjct: 335 SCGKDSTVKLWDVGTGRLVKQYVGATHMQLRCQAVFNDTEEFVLSIDEPSNEIVIWDALT 394

Query: 624 AERVARWPSNHVGVPRWLEHSPTESAFISCGTDKSIRFWKESL 666
           AERVARWPSNHVGVPRWLEHSPTESAFISCGTDKSIRFWKESL
Sbjct: 395 AERVARWPSNHVGVPRWLEHSPTESAFISCGTDKSIRFWKESL 437

[Close]

BLAST of MC03g1250 vs. NCBI nr
Match: XP_011650275.1 (cleavage stimulation factor subunit 50 isoform X1 [Cucumis sativus] >KGN64071.1 hypothetical protein Csa_013657 [Cucumis sativus])

HSP 1 Score: 756 bits (1953), Expect = 7.86e-270
Identity = 375/403 (93.05%), Postives = 386/403 (95.78%), Query Frame = 0


Query: 264 ASAAASATMTPLNVDVPRNKLMELVAKGLAVEKDETLRGNSASALYEFGSSVPTSYGSAL 323
           ASAAASATMTPLNVDVP  KLMELVAKGLAVEKDETLRG+ ASALYEFGSS+PT++GSA 
Sbjct: 35  ASAAASATMTPLNVDVPPKKLMELVAKGLAVEKDETLRGSPASALYEFGSSMPTTFGSAQ 94

Query: 324 ASRTSAIDFSAVQDTKGSSKNFPKHETRHLSEHKNVARCARFSPDGRFVATGSADMSIKL 383
            SR SAIDFS  QDTKGSSKNFPKHETRHLSEHKNVARCARFS DGRFVATGSADMSIKL
Sbjct: 95  PSRPSAIDFSTTQDTKGSSKNFPKHETRHLSEHKNVARCARFSADGRFVATGSADMSIKL 154

Query: 384 FEVAKIKQMMLPDAKDGPVRPVIRTFYDHIQPINDLDFHPQNTVLISGAKDHTIKFFDFS 443
           FEVAKIKQMMLPDAKDGPVRPVIRTFYDHIQPINDLDFHPQNTVL+SGAKDHTIKFFDFS
Sbjct: 155 FEVAKIKQMMLPDAKDGPVRPVIRTFYDHIQPINDLDFHPQNTVLVSGAKDHTIKFFDFS 214

Query: 444 KLTAKKAFRVIQDTHNVRSISLHPSGDYLLAGTDHPIAHLYDVNTFQCFLSANVPEIGSN 503
           KLTAKKAFRVIQDTHNVRSISLHPSGDYLLAGTDH I HLYDVNTFQCFLSANVPEIG+N
Sbjct: 215 KLTAKKAFRVIQDTHNVRSISLHPSGDYLLAGTDHQIPHLYDVNTFQCFLSANVPEIGNN 274

Query: 504 GAINQVRYSATGSMYVTASKDGAVRLWDGVSAKCIRLIASAHAAAEATSAKFTKDERFVL 563
           GAINQ+RYSATGSMYVTASKDGAVRLWDG+ AKCIR I SAH  AEATSAKFTKDER+VL
Sbjct: 275 GAINQIRYSATGSMYVTASKDGAVRLWDGIGAKCIRSIVSAHGTAEATSAKFTKDERYVL 334

Query: 564 SCGKDSTVKLWDVGTGRLVKQYVGATHMQLRCQAVFNDTEEFVLSIDEPSNEIVIWDALT 623
           SCGKDS+VKLWDVGTGRLVKQYVGATH+QLRCQAVFNDTEEFVLSIDEPSNEIVIWDALT
Sbjct: 335 SCGKDSSVKLWDVGTGRLVKQYVGATHIQLRCQAVFNDTEEFVLSIDEPSNEIVIWDALT 394

Query: 624 AERVARWPSNHVGVPRWLEHSPTESAFISCGTDKSIRFWKESL 666
           AERVARWPSNHVG PRWLEHSPTESAFISCGTDKSIRFWKESL
Sbjct: 395 AERVARWPSNHVGAPRWLEHSPTESAFISCGTDKSIRFWKESL 437

[Close]

BLAST of MC03g1250 vs. NCBI nr
Match: XP_008452744.1 (PREDICTED: cleavage stimulation factor subunit 50 isoform X1 [Cucumis melo])

HSP 1 Score: 754 bits (1947), Expect = 6.42e-269
Identity = 374/403 (92.80%), Postives = 387/403 (96.03%), Query Frame = 0


Query: 264 ASAAASATMTPLNVDVPRNKLMELVAKGLAVEKDETLRGNSASALYEFGSSVPTSYGSAL 323
           ASAAASATMTPLNVD+P  KLMELVAKGLAVEKDETLRG+ ASALYEFGSSVPT++GSA 
Sbjct: 35  ASAAASATMTPLNVDIPPKKLMELVAKGLAVEKDETLRGSPASALYEFGSSVPTTFGSAQ 94

Query: 324 ASRTSAIDFSAVQDTKGSSKNFPKHETRHLSEHKNVARCARFSPDGRFVATGSADMSIKL 383
            SR SAI+FS  QDTK SSKNFPKHETRHLSEHKNVARCARFS DGRFVATGSADMSIKL
Sbjct: 95  PSRASAINFSTTQDTKVSSKNFPKHETRHLSEHKNVARCARFSADGRFVATGSADMSIKL 154

Query: 384 FEVAKIKQMMLPDAKDGPVRPVIRTFYDHIQPINDLDFHPQNTVLISGAKDHTIKFFDFS 443
           FEVAKIKQMMLPDAKDGPVRPVIRTFYDHIQPINDLDFHPQNTVL+SGAKDHTIKFFDFS
Sbjct: 155 FEVAKIKQMMLPDAKDGPVRPVIRTFYDHIQPINDLDFHPQNTVLVSGAKDHTIKFFDFS 214

Query: 444 KLTAKKAFRVIQDTHNVRSISLHPSGDYLLAGTDHPIAHLYDVNTFQCFLSANVPEIGSN 503
           KLTAKKAFRVIQDTHNVRSISLHPSGD+LLAGTDH IAHLYDVNTFQCFLSANVPEIG+N
Sbjct: 215 KLTAKKAFRVIQDTHNVRSISLHPSGDHLLAGTDHQIAHLYDVNTFQCFLSANVPEIGNN 274

Query: 504 GAINQVRYSATGSMYVTASKDGAVRLWDGVSAKCIRLIASAHAAAEATSAKFTKDERFVL 563
           GAINQ+RYSATGSMYVTASKDGAVRLWDG+SAKCIR I SAH  AEATSAKFTKDER+VL
Sbjct: 275 GAINQIRYSATGSMYVTASKDGAVRLWDGISAKCIRSIVSAHGTAEATSAKFTKDERYVL 334

Query: 564 SCGKDSTVKLWDVGTGRLVKQYVGATHMQLRCQAVFNDTEEFVLSIDEPSNEIVIWDALT 623
           SCGKDS+VKLWDVGTGRLVKQYVGATHMQLRCQAVFNDTEEFVLSIDEPSNEIVIWDALT
Sbjct: 335 SCGKDSSVKLWDVGTGRLVKQYVGATHMQLRCQAVFNDTEEFVLSIDEPSNEIVIWDALT 394

Query: 624 AERVARWPSNHVGVPRWLEHSPTESAFISCGTDKSIRFWKESL 666
           AERVARWPSNHVG PRWLEHSPTESAFISCGTDKSIRFWKE+L
Sbjct: 395 AERVARWPSNHVGAPRWLEHSPTESAFISCGTDKSIRFWKETL 437

[Close]

BLAST of MC03g1250 vs. NCBI nr
Match: TYJ98952.1 (cleavage stimulation factor subunit 50 isoform X1 [Cucumis melo var. makuwa])

HSP 1 Score: 754 bits (1947), Expect = 8.04e-269
Identity = 374/403 (92.80%), Postives = 387/403 (96.03%), Query Frame = 0


Query: 264 ASAAASATMTPLNVDVPRNKLMELVAKGLAVEKDETLRGNSASALYEFGSSVPTSYGSAL 323
           ASAAASATMTPLNVD+P  KLMELVAKGLAVEKDETLRG+ ASALYEFGSSVPT++GSA 
Sbjct: 41  ASAAASATMTPLNVDIPPKKLMELVAKGLAVEKDETLRGSPASALYEFGSSVPTTFGSAQ 100

Query: 324 ASRTSAIDFSAVQDTKGSSKNFPKHETRHLSEHKNVARCARFSPDGRFVATGSADMSIKL 383
            SR SAI+FS  QDTK SSKNFPKHETRHLSEHKNVARCARFS DGRFVATGSADMSIKL
Sbjct: 101 PSRASAINFSTTQDTKVSSKNFPKHETRHLSEHKNVARCARFSADGRFVATGSADMSIKL 160

Query: 384 FEVAKIKQMMLPDAKDGPVRPVIRTFYDHIQPINDLDFHPQNTVLISGAKDHTIKFFDFS 443
           FEVAKIKQMMLPDAKDGPVRPVIRTFYDHIQPINDLDFHPQNTVL+SGAKDHTIKFFDFS
Sbjct: 161 FEVAKIKQMMLPDAKDGPVRPVIRTFYDHIQPINDLDFHPQNTVLVSGAKDHTIKFFDFS 220

Query: 444 KLTAKKAFRVIQDTHNVRSISLHPSGDYLLAGTDHPIAHLYDVNTFQCFLSANVPEIGSN 503
           KLTAKKAFRVIQDTHNVRSISLHPSGD+LLAGTDH IAHLYDVNTFQCFLSANVPEIG+N
Sbjct: 221 KLTAKKAFRVIQDTHNVRSISLHPSGDHLLAGTDHQIAHLYDVNTFQCFLSANVPEIGNN 280

Query: 504 GAINQVRYSATGSMYVTASKDGAVRLWDGVSAKCIRLIASAHAAAEATSAKFTKDERFVL 563
           GAINQ+RYSATGSMYVTASKDGAVRLWDG+SAKCIR I SAH  AEATSAKFTKDER+VL
Sbjct: 281 GAINQIRYSATGSMYVTASKDGAVRLWDGISAKCIRSIVSAHGTAEATSAKFTKDERYVL 340

Query: 564 SCGKDSTVKLWDVGTGRLVKQYVGATHMQLRCQAVFNDTEEFVLSIDEPSNEIVIWDALT 623
           SCGKDS+VKLWDVGTGRLVKQYVGATHMQLRCQAVFNDTEEFVLSIDEPSNEIVIWDALT
Sbjct: 341 SCGKDSSVKLWDVGTGRLVKQYVGATHMQLRCQAVFNDTEEFVLSIDEPSNEIVIWDALT 400

Query: 624 AERVARWPSNHVGVPRWLEHSPTESAFISCGTDKSIRFWKESL 666
           AERVARWPSNHVG PRWLEHSPTESAFISCGTDKSIRFWKE+L
Sbjct: 401 AERVARWPSNHVGAPRWLEHSPTESAFISCGTDKSIRFWKETL 443

[Close]

BLAST of MC03g1250 vs. NCBI nr
Match: XP_022923614.1 (cleavage stimulation factor subunit 50 isoform X1 [Cucurbita moschata])

HSP 1 Score: 749 bits (1935), Expect = 4.28e-267
Identity = 372/403 (92.31%), Postives = 386/403 (95.78%), Query Frame = 0


Query: 264 ASAAASATMTPLNVDVPRNKLMELVAKGLAVEKDETLRGNSASALYEFGSSVPTSYGSAL 323
           ASAAASA+ TPLNVDVP NKLMELVAKGLAVEK+E LRG+ ASALYEFGSSVP+++GS  
Sbjct: 35  ASAAASASRTPLNVDVPPNKLMELVAKGLAVEKEEMLRGSPASALYEFGSSVPSTFGSTQ 94

Query: 324 ASRTSAIDFSAVQDTKGSSKNFPKHETRHLSEHKNVARCARFSPDGRFVATGSADMSIKL 383
            SR SAIDFS VQDTKGSSKNFPKHETRHLSEHKNVARCARFS DGRFVATGSADMSIKL
Sbjct: 95  PSRASAIDFSTVQDTKGSSKNFPKHETRHLSEHKNVARCARFSADGRFVATGSADMSIKL 154

Query: 384 FEVAKIKQMMLPDAKDGPVRPVIRTFYDHIQPINDLDFHPQNTVLISGAKDHTIKFFDFS 443
           FEVAKIKQMMLPD+KDGPVRPVIRTFYDHIQPINDLDFHPQNTVLISGAKD TIKFFDFS
Sbjct: 155 FEVAKIKQMMLPDSKDGPVRPVIRTFYDHIQPINDLDFHPQNTVLISGAKDQTIKFFDFS 214

Query: 444 KLTAKKAFRVIQDTHNVRSISLHPSGDYLLAGTDHPIAHLYDVNTFQCFLSANVPEIGSN 503
           KLTAKKAFRVIQDTHNVRSISLHPSGDYLLAGTDHPIAHLYDVNTFQCFLSANVPEIG++
Sbjct: 215 KLTAKKAFRVIQDTHNVRSISLHPSGDYLLAGTDHPIAHLYDVNTFQCFLSANVPEIGNS 274

Query: 504 GAINQVRYSATGSMYVTASKDGAVRLWDGVSAKCIRLIASAHAAAEATSAKFTKDERFVL 563
           GAINQVRYSATGSMYVTASKDGAVRLWDGVSAKC+R I SAH  AEATSAKFTKDER+VL
Sbjct: 275 GAINQVRYSATGSMYVTASKDGAVRLWDGVSAKCLRSIVSAHGTAEATSAKFTKDERYVL 334

Query: 564 SCGKDSTVKLWDVGTGRLVKQYVGATHMQLRCQAVFNDTEEFVLSIDEPSNEIVIWDALT 623
           SCGKDSTVKLWDVGTG+LVKQYVGATHMQLRCQAVFND EEFVLSIDEPSNEIVIWDALT
Sbjct: 335 SCGKDSTVKLWDVGTGKLVKQYVGATHMQLRCQAVFNDNEEFVLSIDEPSNEIVIWDALT 394

Query: 624 AERVARWPSNHVGVPRWLEHSPTESAFISCGTDKSIRFWKESL 666
           AERVARWPSNH+G PRWLEHSPTESAFISCGTDKSIRFWKE+L
Sbjct: 395 AERVARWPSNHIGPPRWLEHSPTESAFISCGTDKSIRFWKETL 437

[Close]

BLAST of MC03g1250 vs. ExPASy TrEMBL
Match: A0A6J1C6R2 (Cleavage stimulation factor 50 kDa subunit OS=Momordica charantia OX=3673 GN=LOC111008763 PE=4 SV=1)

HSP 1 Score: 803 bits (2075), Expect = 1.07e-288
Identity = 403/403 (100.00%), Postives = 403/403 (100.00%), Query Frame = 0


Query: 264 ASAAASATMTPLNVDVPRNKLMELVAKGLAVEKDETLRGNSASALYEFGSSVPTSYGSAL 323
           ASAAASATMTPLNVDVPRNKLMELVAKGLAVEKDETLRGNSASALYEFGSSVPTSYGSAL
Sbjct: 35  ASAAASATMTPLNVDVPRNKLMELVAKGLAVEKDETLRGNSASALYEFGSSVPTSYGSAL 94

Query: 324 ASRTSAIDFSAVQDTKGSSKNFPKHETRHLSEHKNVARCARFSPDGRFVATGSADMSIKL 383
           ASRTSAIDFSAVQDTKGSSKNFPKHETRHLSEHKNVARCARFSPDGRFVATGSADMSIKL
Sbjct: 95  ASRTSAIDFSAVQDTKGSSKNFPKHETRHLSEHKNVARCARFSPDGRFVATGSADMSIKL 154

Query: 384 FEVAKIKQMMLPDAKDGPVRPVIRTFYDHIQPINDLDFHPQNTVLISGAKDHTIKFFDFS 443
           FEVAKIKQMMLPDAKDGPVRPVIRTFYDHIQPINDLDFHPQNTVLISGAKDHTIKFFDFS
Sbjct: 155 FEVAKIKQMMLPDAKDGPVRPVIRTFYDHIQPINDLDFHPQNTVLISGAKDHTIKFFDFS 214

Query: 444 KLTAKKAFRVIQDTHNVRSISLHPSGDYLLAGTDHPIAHLYDVNTFQCFLSANVPEIGSN 503
           KLTAKKAFRVIQDTHNVRSISLHPSGDYLLAGTDHPIAHLYDVNTFQCFLSANVPEIGSN
Sbjct: 215 KLTAKKAFRVIQDTHNVRSISLHPSGDYLLAGTDHPIAHLYDVNTFQCFLSANVPEIGSN 274

Query: 504 GAINQVRYSATGSMYVTASKDGAVRLWDGVSAKCIRLIASAHAAAEATSAKFTKDERFVL 563
           GAINQVRYSATGSMYVTASKDGAVRLWDGVSAKCIRLIASAHAAAEATSAKFTKDERFVL
Sbjct: 275 GAINQVRYSATGSMYVTASKDGAVRLWDGVSAKCIRLIASAHAAAEATSAKFTKDERFVL 334

Query: 564 SCGKDSTVKLWDVGTGRLVKQYVGATHMQLRCQAVFNDTEEFVLSIDEPSNEIVIWDALT 623
           SCGKDSTVKLWDVGTGRLVKQYVGATHMQLRCQAVFNDTEEFVLSIDEPSNEIVIWDALT
Sbjct: 335 SCGKDSTVKLWDVGTGRLVKQYVGATHMQLRCQAVFNDTEEFVLSIDEPSNEIVIWDALT 394

Query: 624 AERVARWPSNHVGVPRWLEHSPTESAFISCGTDKSIRFWKESL 666
           AERVARWPSNHVGVPRWLEHSPTESAFISCGTDKSIRFWKESL
Sbjct: 395 AERVARWPSNHVGVPRWLEHSPTESAFISCGTDKSIRFWKESL 437

[Close]

BLAST of MC03g1250 vs. ExPASy TrEMBL
Match: A0A0A0LVN0 (Cleavage stimulation factor 50 kDa subunit OS=Cucumis sativus OX=3659 GN=Csa_1G039850 PE=4 SV=1)

HSP 1 Score: 756 bits (1953), Expect = 3.81e-270
Identity = 375/403 (93.05%), Postives = 386/403 (95.78%), Query Frame = 0


Query: 264 ASAAASATMTPLNVDVPRNKLMELVAKGLAVEKDETLRGNSASALYEFGSSVPTSYGSAL 323
           ASAAASATMTPLNVDVP  KLMELVAKGLAVEKDETLRG+ ASALYEFGSS+PT++GSA 
Sbjct: 35  ASAAASATMTPLNVDVPPKKLMELVAKGLAVEKDETLRGSPASALYEFGSSMPTTFGSAQ 94

Query: 324 ASRTSAIDFSAVQDTKGSSKNFPKHETRHLSEHKNVARCARFSPDGRFVATGSADMSIKL 383
            SR SAIDFS  QDTKGSSKNFPKHETRHLSEHKNVARCARFS DGRFVATGSADMSIKL
Sbjct: 95  PSRPSAIDFSTTQDTKGSSKNFPKHETRHLSEHKNVARCARFSADGRFVATGSADMSIKL 154

Query: 384 FEVAKIKQMMLPDAKDGPVRPVIRTFYDHIQPINDLDFHPQNTVLISGAKDHTIKFFDFS 443
           FEVAKIKQMMLPDAKDGPVRPVIRTFYDHIQPINDLDFHPQNTVL+SGAKDHTIKFFDFS
Sbjct: 155 FEVAKIKQMMLPDAKDGPVRPVIRTFYDHIQPINDLDFHPQNTVLVSGAKDHTIKFFDFS 214

Query: 444 KLTAKKAFRVIQDTHNVRSISLHPSGDYLLAGTDHPIAHLYDVNTFQCFLSANVPEIGSN 503
           KLTAKKAFRVIQDTHNVRSISLHPSGDYLLAGTDH I HLYDVNTFQCFLSANVPEIG+N
Sbjct: 215 KLTAKKAFRVIQDTHNVRSISLHPSGDYLLAGTDHQIPHLYDVNTFQCFLSANVPEIGNN 274

Query: 504 GAINQVRYSATGSMYVTASKDGAVRLWDGVSAKCIRLIASAHAAAEATSAKFTKDERFVL 563
           GAINQ+RYSATGSMYVTASKDGAVRLWDG+ AKCIR I SAH  AEATSAKFTKDER+VL
Sbjct: 275 GAINQIRYSATGSMYVTASKDGAVRLWDGIGAKCIRSIVSAHGTAEATSAKFTKDERYVL 334

Query: 564 SCGKDSTVKLWDVGTGRLVKQYVGATHMQLRCQAVFNDTEEFVLSIDEPSNEIVIWDALT 623
           SCGKDS+VKLWDVGTGRLVKQYVGATH+QLRCQAVFNDTEEFVLSIDEPSNEIVIWDALT
Sbjct: 335 SCGKDSSVKLWDVGTGRLVKQYVGATHIQLRCQAVFNDTEEFVLSIDEPSNEIVIWDALT 394

Query: 624 AERVARWPSNHVGVPRWLEHSPTESAFISCGTDKSIRFWKESL 666
           AERVARWPSNHVG PRWLEHSPTESAFISCGTDKSIRFWKESL
Sbjct: 395 AERVARWPSNHVGAPRWLEHSPTESAFISCGTDKSIRFWKESL 437

[Close]

BLAST of MC03g1250 vs. ExPASy TrEMBL
Match: A0A1S3BUL1 (Cleavage stimulation factor 50 kDa subunit OS=Cucumis melo OX=3656 GN=LOC103493651 PE=4 SV=1)

HSP 1 Score: 754 bits (1947), Expect = 3.11e-269
Identity = 374/403 (92.80%), Postives = 387/403 (96.03%), Query Frame = 0


Query: 264 ASAAASATMTPLNVDVPRNKLMELVAKGLAVEKDETLRGNSASALYEFGSSVPTSYGSAL 323
           ASAAASATMTPLNVD+P  KLMELVAKGLAVEKDETLRG+ ASALYEFGSSVPT++GSA 
Sbjct: 35  ASAAASATMTPLNVDIPPKKLMELVAKGLAVEKDETLRGSPASALYEFGSSVPTTFGSAQ 94

Query: 324 ASRTSAIDFSAVQDTKGSSKNFPKHETRHLSEHKNVARCARFSPDGRFVATGSADMSIKL 383
            SR SAI+FS  QDTK SSKNFPKHETRHLSEHKNVARCARFS DGRFVATGSADMSIKL
Sbjct: 95  PSRASAINFSTTQDTKVSSKNFPKHETRHLSEHKNVARCARFSADGRFVATGSADMSIKL 154

Query: 384 FEVAKIKQMMLPDAKDGPVRPVIRTFYDHIQPINDLDFHPQNTVLISGAKDHTIKFFDFS 443
           FEVAKIKQMMLPDAKDGPVRPVIRTFYDHIQPINDLDFHPQNTVL+SGAKDHTIKFFDFS
Sbjct: 155 FEVAKIKQMMLPDAKDGPVRPVIRTFYDHIQPINDLDFHPQNTVLVSGAKDHTIKFFDFS 214

Query: 444 KLTAKKAFRVIQDTHNVRSISLHPSGDYLLAGTDHPIAHLYDVNTFQCFLSANVPEIGSN 503
           KLTAKKAFRVIQDTHNVRSISLHPSGD+LLAGTDH IAHLYDVNTFQCFLSANVPEIG+N
Sbjct: 215 KLTAKKAFRVIQDTHNVRSISLHPSGDHLLAGTDHQIAHLYDVNTFQCFLSANVPEIGNN 274

Query: 504 GAINQVRYSATGSMYVTASKDGAVRLWDGVSAKCIRLIASAHAAAEATSAKFTKDERFVL 563
           GAINQ+RYSATGSMYVTASKDGAVRLWDG+SAKCIR I SAH  AEATSAKFTKDER+VL
Sbjct: 275 GAINQIRYSATGSMYVTASKDGAVRLWDGISAKCIRSIVSAHGTAEATSAKFTKDERYVL 334

Query: 564 SCGKDSTVKLWDVGTGRLVKQYVGATHMQLRCQAVFNDTEEFVLSIDEPSNEIVIWDALT 623
           SCGKDS+VKLWDVGTGRLVKQYVGATHMQLRCQAVFNDTEEFVLSIDEPSNEIVIWDALT
Sbjct: 335 SCGKDSSVKLWDVGTGRLVKQYVGATHMQLRCQAVFNDTEEFVLSIDEPSNEIVIWDALT 394

Query: 624 AERVARWPSNHVGVPRWLEHSPTESAFISCGTDKSIRFWKESL 666
           AERVARWPSNHVG PRWLEHSPTESAFISCGTDKSIRFWKE+L
Sbjct: 395 AERVARWPSNHVGAPRWLEHSPTESAFISCGTDKSIRFWKETL 437

[Close]

BLAST of MC03g1250 vs. ExPASy TrEMBL
Match: A0A5D3BGR2 (Cleavage stimulation factor 50 kDa subunit OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold248G001530 PE=4 SV=1)

HSP 1 Score: 754 bits (1947), Expect = 3.89e-269
Identity = 374/403 (92.80%), Postives = 387/403 (96.03%), Query Frame = 0


Query: 264 ASAAASATMTPLNVDVPRNKLMELVAKGLAVEKDETLRGNSASALYEFGSSVPTSYGSAL 323
           ASAAASATMTPLNVD+P  KLMELVAKGLAVEKDETLRG+ ASALYEFGSSVPT++GSA 
Sbjct: 41  ASAAASATMTPLNVDIPPKKLMELVAKGLAVEKDETLRGSPASALYEFGSSVPTTFGSAQ 100

Query: 324 ASRTSAIDFSAVQDTKGSSKNFPKHETRHLSEHKNVARCARFSPDGRFVATGSADMSIKL 383
            SR SAI+FS  QDTK SSKNFPKHETRHLSEHKNVARCARFS DGRFVATGSADMSIKL
Sbjct: 101 PSRASAINFSTTQDTKVSSKNFPKHETRHLSEHKNVARCARFSADGRFVATGSADMSIKL 160

Query: 384 FEVAKIKQMMLPDAKDGPVRPVIRTFYDHIQPINDLDFHPQNTVLISGAKDHTIKFFDFS 443
           FEVAKIKQMMLPDAKDGPVRPVIRTFYDHIQPINDLDFHPQNTVL+SGAKDHTIKFFDFS
Sbjct: 161 FEVAKIKQMMLPDAKDGPVRPVIRTFYDHIQPINDLDFHPQNTVLVSGAKDHTIKFFDFS 220

Query: 444 KLTAKKAFRVIQDTHNVRSISLHPSGDYLLAGTDHPIAHLYDVNTFQCFLSANVPEIGSN 503
           KLTAKKAFRVIQDTHNVRSISLHPSGD+LLAGTDH IAHLYDVNTFQCFLSANVPEIG+N
Sbjct: 221 KLTAKKAFRVIQDTHNVRSISLHPSGDHLLAGTDHQIAHLYDVNTFQCFLSANVPEIGNN 280

Query: 504 GAINQVRYSATGSMYVTASKDGAVRLWDGVSAKCIRLIASAHAAAEATSAKFTKDERFVL 563
           GAINQ+RYSATGSMYVTASKDGAVRLWDG+SAKCIR I SAH  AEATSAKFTKDER+VL
Sbjct: 281 GAINQIRYSATGSMYVTASKDGAVRLWDGISAKCIRSIVSAHGTAEATSAKFTKDERYVL 340

Query: 564 SCGKDSTVKLWDVGTGRLVKQYVGATHMQLRCQAVFNDTEEFVLSIDEPSNEIVIWDALT 623
           SCGKDS+VKLWDVGTGRLVKQYVGATHMQLRCQAVFNDTEEFVLSIDEPSNEIVIWDALT
Sbjct: 341 SCGKDSSVKLWDVGTGRLVKQYVGATHMQLRCQAVFNDTEEFVLSIDEPSNEIVIWDALT 400

Query: 624 AERVARWPSNHVGVPRWLEHSPTESAFISCGTDKSIRFWKESL 666
           AERVARWPSNHVG PRWLEHSPTESAFISCGTDKSIRFWKE+L
Sbjct: 401 AERVARWPSNHVGAPRWLEHSPTESAFISCGTDKSIRFWKETL 443

[Close]

BLAST of MC03g1250 vs. ExPASy TrEMBL
Match: A0A6J1E6X2 (Cleavage stimulation factor 50 kDa subunit OS=Cucurbita moschata OX=3662 GN=LOC111431271 PE=4 SV=1)

HSP 1 Score: 749 bits (1935), Expect = 2.07e-267
Identity = 372/403 (92.31%), Postives = 386/403 (95.78%), Query Frame = 0


Query: 264 ASAAASATMTPLNVDVPRNKLMELVAKGLAVEKDETLRGNSASALYEFGSSVPTSYGSAL 323
           ASAAASA+ TPLNVDVP NKLMELVAKGLAVEK+E LRG+ ASALYEFGSSVP+++GS  
Sbjct: 35  ASAAASASRTPLNVDVPPNKLMELVAKGLAVEKEEMLRGSPASALYEFGSSVPSTFGSTQ 94

Query: 324 ASRTSAIDFSAVQDTKGSSKNFPKHETRHLSEHKNVARCARFSPDGRFVATGSADMSIKL 383
            SR SAIDFS VQDTKGSSKNFPKHETRHLSEHKNVARCARFS DGRFVATGSADMSIKL
Sbjct: 95  PSRASAIDFSTVQDTKGSSKNFPKHETRHLSEHKNVARCARFSADGRFVATGSADMSIKL 154

Query: 384 FEVAKIKQMMLPDAKDGPVRPVIRTFYDHIQPINDLDFHPQNTVLISGAKDHTIKFFDFS 443
           FEVAKIKQMMLPD+KDGPVRPVIRTFYDHIQPINDLDFHPQNTVLISGAKD TIKFFDFS
Sbjct: 155 FEVAKIKQMMLPDSKDGPVRPVIRTFYDHIQPINDLDFHPQNTVLISGAKDQTIKFFDFS 214

Query: 444 KLTAKKAFRVIQDTHNVRSISLHPSGDYLLAGTDHPIAHLYDVNTFQCFLSANVPEIGSN 503
           KLTAKKAFRVIQDTHNVRSISLHPSGDYLLAGTDHPIAHLYDVNTFQCFLSANVPEIG++
Sbjct: 215 KLTAKKAFRVIQDTHNVRSISLHPSGDYLLAGTDHPIAHLYDVNTFQCFLSANVPEIGNS 274

Query: 504 GAINQVRYSATGSMYVTASKDGAVRLWDGVSAKCIRLIASAHAAAEATSAKFTKDERFVL 563
           GAINQVRYSATGSMYVTASKDGAVRLWDGVSAKC+R I SAH  AEATSAKFTKDER+VL
Sbjct: 275 GAINQVRYSATGSMYVTASKDGAVRLWDGVSAKCLRSIVSAHGTAEATSAKFTKDERYVL 334

Query: 564 SCGKDSTVKLWDVGTGRLVKQYVGATHMQLRCQAVFNDTEEFVLSIDEPSNEIVIWDALT 623
           SCGKDSTVKLWDVGTG+LVKQYVGATHMQLRCQAVFND EEFVLSIDEPSNEIVIWDALT
Sbjct: 335 SCGKDSTVKLWDVGTGKLVKQYVGATHMQLRCQAVFNDNEEFVLSIDEPSNEIVIWDALT 394

Query: 624 AERVARWPSNHVGVPRWLEHSPTESAFISCGTDKSIRFWKESL 666
           AERVARWPSNH+G PRWLEHSPTESAFISCGTDKSIRFWKE+L
Sbjct: 395 AERVARWPSNHIGPPRWLEHSPTESAFISCGTDKSIRFWKETL 437

[Close]

BLAST of MC03g1250 vs. TAIR 10
Match: AT5G60940.1 (Transducin/WD40 repeat-like superfamily protein )

HSP 1 Score: 580.1 bits (1494), Expect = 2.3e-165
Identity = 279/404 (69.06%), Postives = 338/404 (83.66%), Query Frame = 0


Query: 263 LASAAASATMTPLNVDVPRNKLMELVAKGLAVEKDETLRGNSASALYEFGSSVPTSYGSA 322
           +ASA ASATMTPLN++VP N+L+ELVAKGLA E + TLRG S+S L      +P+SYGS 
Sbjct: 36  VASAVASATMTPLNIEVPPNRLLELVAKGLAAENNGTLRGVSSSVL------LPSSYGSI 95

Query: 323 LASRTSAIDFSAVQDTKGSSKNFPKHETRHLSEHKNVARCARFSPDGRFVATGSADMSIK 382
              RT++IDFS V   KGSSK  PKHE++ LSEHK+V RCARFSPDG F ATG AD SIK
Sbjct: 96  TTPRTASIDFS-VNHAKGSSKTIPKHESKTLSEHKSVVRCARFSPDGMFFATGGADTSIK 155

Query: 383 LFEVAKIKQMMLPDAKDGPVRPVIRTFYDHIQPINDLDFHPQNTVLISGAKDHTIKFFDF 442
           LFEV K+KQM+  D +    RP+IRTFYDH +PINDLDFHP++T+LIS AKD+ IKFFDF
Sbjct: 156 LFEVPKVKQMISGDTQ---ARPLIRTFYDHAEPINDLDFHPRSTILISSAKDNCIKFFDF 215

Query: 443 SKLTAKKAFRVIQDTHNVRSISLHPSGDYLLAGTDHPIAHLYDVNTFQCFLSANVPEIGS 502
           SK TAK+AF+V QDTHNVRSIS HPSG++LLAGTDHPI HLYDVNT+QCFL +N P+ G 
Sbjct: 216 SKTTAKRAFKVFQDTHNVRSISFHPSGEFLLAGTDHPIPHLYDVNTYQCFLPSNFPDSGV 275

Query: 503 NGAINQVRYSATGSMYVTASKDGAVRLWDGVSAKCIRLIASAHAAAEATSAKFTKDERFV 562
           +GAINQVRYS+TGS+Y+TASKDGA+RL+DGVSAKC+R I +AH  +E TSA FTKD+RFV
Sbjct: 276 SGAINQVRYSSTGSIYITASKDGAIRLFDGVSAKCVRSIGNAHGKSEVTSAVFTKDQRFV 335

Query: 563 LSCGKDSTVKLWDVGTGRLVKQYVGATHMQLRCQAVFNDTEEFVLSIDEPSNEIVIWDAL 622
           LS GKDSTVKLW++G+GR+VK+Y+GA  ++LR QA+FNDTEEFV+SIDE SNE+V WDA 
Sbjct: 336 LSSGKDSTVKLWEIGSGRMVKEYLGAKRVKLRSQAIFNDTEEFVISIDEASNEVVTWDAR 395

Query: 623 TAERVARWPSNHVGVPRWLEHSPTESAFISCGTDKSIRFWKESL 667
           TA++VA+WPSNH G PRW+EHSP ES F++CG D+SIRFWKES+
Sbjct: 396 TADKVAKWPSNHNGAPRWIEHSPVESVFVTCGIDRSIRFWKESV 429

[Close]

BLAST of MC03g1250 vs. TAIR 10
Match: AT5G60940.2 (Transducin/WD40 repeat-like superfamily protein )

HSP 1 Score: 511.9 bits (1317), Expect = 7.6e-145
Identity = 236/334 (70.66%), Postives = 286/334 (85.63%), Query Frame = 0


Query: 333 SAVQDTKGSSKNFPKHETRHLSEHKNVARCARFSPDGRFVATGSADMSIKLFEVAKIKQM 392
           ++V   KGSSK  PKHE++ LSEHK+V RCARFSPDG F ATG AD SIKLFEV K+KQM
Sbjct: 7   TSVNHAKGSSKTIPKHESKTLSEHKSVVRCARFSPDGMFFATGGADTSIKLFEVPKVKQM 66

Query: 393 MLPDAKDGPVRPVIRTFYDHIQPINDLDFHPQNTVLISGAKDHTIKFFDFSKLTAKKAFR 452
           +  D +    RP+IRTFYDH +PINDLDFHP++T+LIS AKD+ IKFFDFSK TAK+AF+
Sbjct: 67  ISGDTQ---ARPLIRTFYDHAEPINDLDFHPRSTILISSAKDNCIKFFDFSKTTAKRAFK 126

Query: 453 VIQDTHNVRSISLHPSGDYLLAGTDHPIAHLYDVNTFQCFLSANVPEIGSNGAINQVRYS 512
           V QDTHNVRSIS HPSG++LLAGTDHPI HLYDVNT+QCFL +N P+ G +GAINQVRYS
Sbjct: 127 VFQDTHNVRSISFHPSGEFLLAGTDHPIPHLYDVNTYQCFLPSNFPDSGVSGAINQVRYS 186

Query: 513 ATGSMYVTASKDGAVRLWDGVSAKCIRLIASAHAAAEATSAKFTKDERFVLSCGKDSTVK 572
           +TGS+Y+TASKDGA+RL+DGVSAKC+R I +AH  +E TSA FTKD+RFVLS GKDSTVK
Sbjct: 187 STGSIYITASKDGAIRLFDGVSAKCVRSIGNAHGKSEVTSAVFTKDQRFVLSSGKDSTVK 246

Query: 573 LWDVGTGRLVKQYVGATHMQLRCQAVFNDTEEFVLSIDEPSNEIVIWDALTAERVARWPS 632
           LW++G+GR+VK+Y+GA  ++LR QA+FNDTEEFV+SIDE SNE+V WDA TA++VA+WPS
Sbjct: 247 LWEIGSGRMVKEYLGAKRVKLRSQAIFNDTEEFVISIDEASNEVVTWDARTADKVAKWPS 306

Query: 633 NHVGVPRWLEHSPTESAFISCGTDKSIRFWKESL 667
           NH G PRW+EHSP ES F++CG D+SIRFWKES+
Sbjct: 307 NHNGAPRWIEHSPVESVFVTCGIDRSIRFWKESV 337

[Close]

BLAST of MC03g1250 vs. TAIR 10
Match: AT5G15630.1 (COBRA-like extracellular glycosyl-phosphatidyl inositol-anchored protein family )

HSP 1 Score: 362.1 bits (928), Expect = 9.8e-100
Identity = 160/244 (65.57%), Postives = 194/244 (79.51%), Query Frame = 0


Query: 3   FFFVFL---VAYDSLDPNGNIEIKWDVMYWTADGYGATVTITNYQMYRHIMSPGWTLGWV 62
           FFF+ +    AYD LDP+GNI IKWD+M WTADGY ATVT+ N+Q+YRHI +PGWTLGW 
Sbjct: 10  FFFMIIFTATAYDPLDPSGNITIKWDIMSWTADGYVATVTMNNFQIYRHIQNPGWTLGWT 69

Query: 63  WAKKEVIWSIQGAEATDQGDCSTFGETIPHSCKRDPTVVDLLPGVPYNKQVAMCCKGGVL 122
           WAKKEVIWS+ GA+ T+QGDCS F   +PH CK+ PTVVDLLPGVPYN+Q + CCKGGV+
Sbjct: 70  WAKKEVIWSMVGAQTTEQGDCSKFKGNVPHCCKKTPTVVDLLPGVPYNQQFSNCCKGGVI 129

Query: 123 ASWGQDPSSAVSSFQLTVGHSGSSNTTVKLPKNFTLYGPGLGYTCGQAKIAPKSAFYSSD 182
            +WGQDPS+AVS FQ++ G +G++N TVKLPKNFTL GPG GYTCG AKI P + F ++D
Sbjct: 130 GAWGQDPSAAVSQFQVSAGLAGTTNKTVKLPKNFTLLGPGPGYTCGPAKIVPSTVFLTTD 189

Query: 183 GRRKTYALMTWNVICTYSQFLASETPTCCVSMSSFYNSKITPCKACACGCQRKMECIFYQ 242
            RRKT ALMTWNV CTYSQFLA + P+CCVS SSFYN  ITPC +CACGC+ K  C+   
Sbjct: 190 KRRKTQALMTWNVTCTYSQFLARKHPSCCVSFSSFYNDTITPCPSCACGCENKKSCVKAD 249

Query: 243 KEVI 244
            +++
Sbjct: 250 SKIL 253

[Close]

BLAST of MC03g1250 vs. TAIR 10
Match: AT5G60920.1 (COBRA-like extracellular glycosyl-phosphatidyl inositol-anchored protein family )

HSP 1 Score: 339.3 bits (869), Expect = 6.8e-93
Identity = 150/226 (66.37%), Postives = 178/226 (78.76%), Query Frame = 0


Query: 5   FVFLVAYDSLDPNGNIEIKWDVMYWTADGYGATVTITNYQMYRHIMSPGWTLGWVWAKKE 64
           F    AYD+LDP GNI +KWDVM WT DGY A VT+ N+Q YRHI SPGWTLGW WAKKE
Sbjct: 31  FTSTEAYDALDPEGNITMKWDVMSWTPDGYVAVVTMFNFQKYRHIQSPGWTLGWKWAKKE 90

Query: 65  VIWSIQGAEATDQGDCSTFGETIPHSCKRDPTVVDLLPGVPYNKQVAMCCKGGVLASWGQ 124
           VIWS+ GA+ T+QGDCS +   IPH CK+DPTVVDLLPG PYN+Q+A CCKGGV+ SW Q
Sbjct: 91  VIWSMVGAQTTEQGDCSKYKGNIPHCCKKDPTVVDLLPGTPYNQQIANCCKGGVMNSWVQ 150

Query: 125 DPSSAVSSFQLTVGHSGSSNTTVKLPKNFTLYGPGLGYTCGQAKIAPKSAFYSSDGRRKT 184
           DP++A SSFQ++VG +G++N TV++P+NFTL GPG GYTCG AKI   + F ++D RR T
Sbjct: 151 DPATAASSFQISVGAAGTTNKTVRVPRNFTLMGPGPGYTCGPAKIVRPTKFVTTDTRRTT 210

Query: 185 YALMTWNVICTYSQFLASETPTCCVSMSSFYNSKITPCKACACGCQ 231
            A+MTWN+ CTYSQFLA  TPTCCVS+SSFYN  I  C  CACGCQ
Sbjct: 211 QAMMTWNITCTYSQFLAQRTPTCCVSLSSFYNETIVGCPTCACGCQ 256

[Close]

BLAST of MC03g1250 vs. TAIR 10
Match: AT3G29810.1 (COBRA-like protein 2 precursor )

HSP 1 Score: 335.1 bits (858), Expect = 1.3e-91
Identity = 144/232 (62.07%), Postives = 179/232 (77.16%), Query Frame = 0


Query: 3   FFFVFLVAYDSLDPNGNIEIKWDVMYWTADGYGATVTITNYQMYRHIMSPGWTLGWVWAK 62
           F F    AYD+LDP GNI IKWD+M WT DGY A VTI N+Q YRHI +PGW LGW W K
Sbjct: 21  FTFTTTEAYDALDPYGNITIKWDIMSWTGDGYVAVVTIFNFQQYRHIEAPGWQLGWSWMK 80

Query: 63  KEVIWSIQGAEATDQGDCSTFGETIPHSCKRDPTVVDLLPGVPYNKQVAMCCKGGVLASW 122
           KEVIWS+ G +AT+QGDCS F   IPH CK+ P +VDLLPG PYN+Q++ CC+GGV+++W
Sbjct: 81  KEVIWSMVGGQATEQGDCSKFKGNIPHCCKKTPAIVDLLPGTPYNQQISNCCRGGVISAW 140

Query: 123 GQDPSSAVSSFQLTVGHSGSSNTTVKLPKNFTLYGPGLGYTCGQAKIAPKSAFYSSDGRR 182
            QDP++A+SSFQ++VG SG++NTTV+ P+N TL  PG GYTCG AK+   S F S+D RR
Sbjct: 141 AQDPATAISSFQISVGQSGTTNTTVRAPRNITLKAPGPGYTCGPAKLVKPSRFISADKRR 200

Query: 183 KTYALMTWNVICTYSQFLASETPTCCVSMSSFYNSKITPCKACACGCQRKME 235
           KT +L+TWN+ CTYSQFLA +TPTCCVS+S+FYN  I PC  C+CGCQ   +
Sbjct: 201 KTQSLLTWNITCTYSQFLARKTPTCCVSLSAFYNETIVPCPTCSCGCQNSSQ 252

The following BLAST results are available for this feature:

BLAST of MC03g1250 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q8L4J2	3.2e-164	69.06	Cleavage stimulation factor subunit 50 OS=Arabidopsis thaliana OX=3702 GN=CSTF50...	[more]
Q9LFW3	1.4e-98	65.57	COBRA-like protein 4 OS=Arabidopsis thaliana OX=3702 GN=COBL4 PE=2 SV=2	[more]
Q6Z4G7	2.3e-93	64.38	COBRA-like protein 6 OS=Oryza sativa subsp. japonica OX=39947 GN=BC1L7 PE=3 SV=1	[more]
Q94KT8	9.5e-92	66.37	Protein COBRA OS=Arabidopsis thaliana OX=3702 GN=COB PE=2 SV=1	[more]
Q6Z4G8	4.7e-91	63.25	COBRA-like protein 1 OS=Oryza sativa subsp. japonica OX=39947 GN=BC1L6 PE=2 SV=1	[more]

BLAST of MC03g1250 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022137259.1	2.22e-288	100.00	cleavage stimulation factor subunit 50 [Momordica charantia]	[more]
XP_011650275.1	7.86e-270	93.05	cleavage stimulation factor subunit 50 isoform X1 [Cucumis sativus] >KGN64071.1 ...	[more]
XP_008452744.1	6.42e-269	92.80	PREDICTED: cleavage stimulation factor subunit 50 isoform X1 [Cucumis melo]	[more]
TYJ98952.1	8.04e-269	92.80	cleavage stimulation factor subunit 50 isoform X1 [Cucumis melo var. makuwa]	[more]
XP_022923614.1	4.28e-267	92.31	cleavage stimulation factor subunit 50 isoform X1 [Cucurbita moschata]	[more]

BLAST of MC03g1250 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1C6R2	1.07e-288	100.00	Cleavage stimulation factor 50 kDa subunit OS=Momordica charantia OX=3673 GN=LOC...	[more]
A0A0A0LVN0	3.81e-270	93.05	Cleavage stimulation factor 50 kDa subunit OS=Cucumis sativus OX=3659 GN=Csa_1G0...	[more]
A0A1S3BUL1	3.11e-269	92.80	Cleavage stimulation factor 50 kDa subunit OS=Cucumis melo OX=3656 GN=LOC1034936...	[more]
A0A5D3BGR2	3.89e-269	92.80	Cleavage stimulation factor 50 kDa subunit OS=Cucumis melo var. makuwa OX=119469...	[more]
A0A6J1E6X2	2.07e-267	92.31	Cleavage stimulation factor 50 kDa subunit OS=Cucurbita moschata OX=3662 GN=LOC1...	[more]

BLAST of MC03g1250 vs. TAIR 10


Match Name	E-value	Identity	Description
AT5G60940.1	2.3e-165	69.06	Transducin/WD40 repeat-like superfamily protein	[more]
AT5G60940.2	7.6e-145	70.66	Transducin/WD40 repeat-like superfamily protein	[more]
AT5G15630.1	9.8e-100	65.57	COBRA-like extracellular glycosyl-phosphatidyl inositol-anchored protein family	[more]
AT5G60920.1	6.8e-93	66.37	COBRA-like extracellular glycosyl-phosphatidyl inositol-anchored protein family	[more]
AT3G29810.1	1.3e-91	62.07	COBRA-like protein 2 precursor	[more]

InterPro

Analysis Name: InterPro Annotations of Bitter gourd (Dali-11) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR020472	G-protein beta WD-40 repeat	PRINTS	PR00320	GPROTEINBRPT	coord: 562..576 score: 37.63 coord: 650..664 score: 28.91 coord: 518..532 score: 35.72
IPR001680	WD40 repeat	SMART	SM00320	WD40_4	coord: 534..575 e-value: 9.7E-5 score: 31.8 coord: 623..663 e-value: 0.96 score: 17.1 coord: 346..385 e-value: 2.8E-6 score: 36.9 coord: 402..441 e-value: 7.2E-7 score: 38.8 coord: 488..531 e-value: 0.0016 score: 27.7 coord: 447..485 e-value: 5.4 score: 12.4
IPR001680	WD40 repeat	PFAM	PF00400	WD40	coord: 350..384 e-value: 8.6E-6 score: 26.4 coord: 544..575 e-value: 0.0027 score: 18.5 coord: 504..531 e-value: 0.1 score: 13.5 coord: 406..441 e-value: 1.9E-5 score: 25.3
IPR001680	WD40 repeat	PROSITE	PS50082	WD_REPEATS_2	coord: 353..394 score: 11.109979
IPR001680	WD40 repeat	PROSITE	PS50082	WD_REPEATS_2	coord: 409..450 score: 10.809215
IPR001680	WD40 repeat	PROSITE	PS50082	WD_REPEATS_2	coord: 551..584 score: 10.942887
IPR001680	WD40 repeat	PROSITE	PS50082	WD_REPEATS_2	coord: 499..540 score: 11.845179
IPR006918	COBRA, plant	PFAM	PF04833	COBRA	coord: 34..197 e-value: 4.3E-65 score: 218.6
IPR015943	WD40/YVTN repeat-like-containing domain superfamily	GENE3D	2.130.10.10		coord: 334..665 e-value: 3.7E-59 score: 202.0
IPR044633	Cleavage stimulation factor subunit 1-like	PANTHER	PTHR44133	CLEAVAGE STIMULATION FACTOR SUBUNIT 1	coord: 263..665
IPR019775	WD40 repeat, conserved site	PROSITE	PS00678	WD_REPEATS_1	coord: 562..576
None	No IPR available	PROSITE	PS50294	WD_REPEATS_REGION	coord: 409..443 score: 8.940149
None	No IPR available	PROSITE	PS50294	WD_REPEATS_REGION	coord: 499..531 score: 9.862871
None	No IPR available	PROSITE	PS50294	WD_REPEATS_REGION	coord: 353..386 score: 9.124694
None	No IPR available	CDD	cd00200	WD40	coord: 349..663 e-value: 5.55346E-46 score: 162.889
IPR036322	WD40-repeat-containing domain superfamily	SUPERFAMILY	50978	WD40 repeat-like	coord: 345..663

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
MC03g1250.1	MC03g1250.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0010215	cellulose microfibril organization
biological_process	GO:0031124	mRNA 3'-end processing
cellular_component	GO:0031225	anchored component of membrane
cellular_component	GO:0005848	mRNA cleavage stimulating factor complex
molecular_function	GO:0005515	protein binding