MC03g1189 (gene) Bitter gourd (Dali-11) v1

Overview


Name	MC03g1189
Type	gene
Organism	Momordica charantia cv. Dali-11 (Bitter gourd (Dali-11) v1)
Description	Unknown protein
Location	MC03: 17973292 .. 17973603 (-)
RNA-Seq Expression	MC03g1189
Synteny	MC03g1189

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATTGAGAATGAAAACTTCCCCACAACAGCAAAAAACTCAACTGGGTCTTCTCTCTCTCTCAAAACCCATCTCAGAAATAGAAGAGAGATTGCAAAAATGGCGAGATTGATGAGAGAGATGGGCGGTGGTAATGGAAGTTTTGGTGTCGCCGGTGACATTTATTTGCTGTTTTGGGCGGCTCTGTTTACACTCTGCATAATCTCCACCATAATTTTCTCTTGCTCCGACGGCATGTCCAAGGAGAGGACTAATTCCACGGCGGACGTCGAGCTTTACGGCTGCGCCGCCGGGTGTGGCGCTGGATGTGGTGCA

mRNA sequence

ATTGAGAATGAAAACTTCCCCACAACAGCAAAAAACTCAACTGGGTCTTCTCTCTCTCTCAAAACCCATCTCAGAAATAGAAGAGAGATTGCAAAAATGGCGAGATTGATGAGAGAGATGGGCGGTGGTAATGGAAGTTTTGGTGTCGCCGGTGACATTTATTTGCTGTTTTGGGCGGCTCTGTTTACACTCTGCATAATCTCCACCATAATTTTCTCTTGCTCCGACGGCATGTCCAAGGAGAGGACTAATTCCACGGCGGACGTCGAGCTTTACGGCTGCGCCGCCGGGTGTGGCGCTGGATGTGGTGCA

Coding sequence (CDS)

ATTGAGAATGAAAACTTCCCCACAACAGCAAAAAACTCAACTGGGTCTTCTCTCTCTCTCAAAACCCATCTCAGAAATAGAAGAGAGATTGCAAAAATGGCGAGATTGATGAGAGAGATGGGCGGTGGTAATGGAAGTTTTGGTGTCGCCGGTGACATTTATTTGCTGTTTTGGGCGGCTCTGTTTACACTCTGCATAATCTCCACCATAATTTTCTCTTGCTCCGACGGCATGTCCAAGGAGAGGACTAATTCCACGGCGGACGTCGAGCTTTACGGCTGCGCCGCCGGGTGTGGCGCTGGATGTGGTGCA

Protein sequence

IENENFPTTAKNSTGSSLSLKTHLRNRREIAKMARLMREMGGGNGSFGVAGDIYLLFWAALFTLCIISTIIFSCSDGMSKERTNSTADVELYGCAAGCGAGCGA

Homology

[Close]

BLAST of MC03g1189 vs. NCBI nr
Match: KAG6584341.1 (hypothetical protein SDJN03_20273, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 125 bits (315), Expect = 2.12e-35
Identity = 64/74 (86.49%), Postives = 66/74 (89.19%), Query Frame = 0


Query: 33  MARLMREMGGGNGSFGVAGDIYLLFWAALFTLCIISTIIFSCSDGMSKERTNSTADVELY 92
           MARLMRE G  NGSFG+AGDIYLLFWAALFTLCIISTIIFSCSDGMS +  NSTADVELY
Sbjct: 1   MARLMREFGSQNGSFGLAGDIYLLFWAALFTLCIISTIIFSCSDGMSTKDRNSTADVELY 60

Query: 93  G--CAAGCGAGCGA 104
           G  CAAGCGAGCGA
Sbjct: 61  GAGCAAGCGAGCGA 74

[Close]

BLAST of MC03g1189 vs. NCBI nr
Match: KAE8652552.1 (hypothetical protein Csa_013579 [Cucumis sativus])

HSP 1 Score: 120 bits (301), Expect = 6.50e-33
Identity = 72/108 (66.67%), Postives = 81/108 (75.00%), Query Frame = 0


Query: 1   IENENFPTTAKNSTGSSL-SLKTHLRNRREIAKMARLMREMGGGNGSFGVAG-DIYLLFW 60
           ++NENFP   + +  SSL SLK        I KMARLMRE+   NGSFG+AG + Y LFW
Sbjct: 1   MDNENFPKKQQLNWVSSLYSLKPI-----SIVKMARLMREISSQNGSFGLAGGETYWLFW 60

Query: 61  AALFTLCIISTIIFSCSDGMSKERTNSTADVELYG--CAAGCGAGCGA 104
            ALFTLCIIST+IFSCSDGMSK+R NST DVELYG  CAAGCGAGCGA
Sbjct: 61  VALFTLCIISTLIFSCSDGMSKDR-NSTVDVELYGGGCAAGCGAGCGA 102

[Close]

BLAST of MC03g1189 vs. NCBI nr
Match: KAG6572949.1 (hypothetical protein SDJN03_26836, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 96.7 bits (239), Expect = 6.98e-24
Identity = 53/72 (73.61%), Postives = 59/72 (81.94%), Query Frame = 0


Query: 33  MARLMREMGGGNGSFGVAGDIYLLFWAALFTLCIISTIIFSCSDGMSKERTNSTADVELY 92
           MARL+ E+G  +GSFG++GDI  LF AALFTLCIIS I FSCSDG+SKER NSTADVELY
Sbjct: 1   MARLIGEIGSVDGSFGLSGDISCLFLAALFTLCIISLITFSCSDGISKER-NSTADVELY 60

Query: 93  GCAAGCGAGCGA 104
           G   GC AGCGA
Sbjct: 61  G--GGCAAGCGA 69

[Close]

BLAST of MC03g1189 vs. NCBI nr
Match: XP_015882794.1 (uncharacterized protein LOC107418606 [Ziziphus jujuba])

HSP 1 Score: 80.5 bits (197), Expect = 1.75e-17
Identity = 46/74 (62.16%), Postives = 56/74 (75.68%), Query Frame = 0


Query: 33  MARLMREMGGGNGSFGVAGDIYLLFWAALFTLCIISTIIFSCSDGMSKERTNSTADVELY 92
           M RL R++   +GS G AG  +++ W AL  +CIIS IIFSC+DG+SKE+T STAD ELY
Sbjct: 1   MVRLWRDLASVHGS-GSAG--FVVLWLALLGVCIISAIIFSCADGVSKEKT-STADTELY 60

Query: 93  G--CAAGCGAGCGA 104
           G  CAAGCGAGCGA
Sbjct: 61  GGGCAAGCGAGCGA 70

[Close]

BLAST of MC03g1189 vs. NCBI nr
Match: PON38946.1 (hypothetical protein PanWU01x14_308610 [Parasponia andersonii])

HSP 1 Score: 79.0 bits (193), Expect = 8.08e-17
Identity = 45/75 (60.00%), Postives = 52/75 (69.33%), Query Frame = 0


Query: 33  MARLMREMGGGNGSFGVA--GDIYLLFWAALFTLCIISTIIFSCSDGMSKERTNSTADVE 92
           M RL RE  G +G  G +  G   + F   L TLCI+STIIFSC+DG+SKE+T S AD E
Sbjct: 1   MVRLWREAAGVDGGVGSSHSGTFLVFFLGLLVTLCILSTIIFSCTDGVSKEKT-SQADTE 60

Query: 93  LYG--CAAGCGAGCG 103
           LYG  CAAGCGAGCG
Sbjct: 61  LYGGGCAAGCGAGCG 74

[Close]

BLAST of MC03g1189 vs. ExPASy TrEMBL
Match: A0A0A0LQU7 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G042580 PE=4 SV=1)

HSP 1 Score: 110 bits (276), Expect = 9.00e-30
Identity = 59/75 (78.67%), Postives = 64/75 (85.33%), Query Frame = 0


Query: 33  MARLMREMGGGNGSFGVAG-DIYLLFWAALFTLCIISTIIFSCSDGMSKERTNSTADVEL 92
           MARLMRE+   NGSFG+AG + Y LFW ALFTLCIIST+IFSCSDGMSK+R NST DVEL
Sbjct: 1   MARLMREISSQNGSFGLAGGETYWLFWVALFTLCIISTLIFSCSDGMSKDR-NSTVDVEL 60

Query: 93  YG--CAAGCGAGCGA 104
           YG  CAAGCGAGCGA
Sbjct: 61  YGGGCAAGCGAGCGA 74

[Close]

BLAST of MC03g1189 vs. ExPASy TrEMBL
Match: A0A6P3ZT85 (uncharacterized protein LOC107418606 OS=Ziziphus jujuba OX=326968 GN=LOC107418606 PE=4 SV=1)

HSP 1 Score: 80.5 bits (197), Expect = 8.47e-18
Identity = 46/74 (62.16%), Postives = 56/74 (75.68%), Query Frame = 0


Query: 33  MARLMREMGGGNGSFGVAGDIYLLFWAALFTLCIISTIIFSCSDGMSKERTNSTADVELY 92
           M RL R++   +GS G AG  +++ W AL  +CIIS IIFSC+DG+SKE+T STAD ELY
Sbjct: 1   MVRLWRDLASVHGS-GSAG--FVVLWLALLGVCIISAIIFSCADGVSKEKT-STADTELY 60

Query: 93  G--CAAGCGAGCGA 104
           G  CAAGCGAGCGA
Sbjct: 61  GGGCAAGCGAGCGA 70

[Close]

BLAST of MC03g1189 vs. ExPASy TrEMBL
Match: A0A2P5AQX4 (Uncharacterized protein OS=Parasponia andersonii OX=3476 GN=PanWU01x14_308610 PE=4 SV=1)

HSP 1 Score: 79.0 bits (193), Expect = 3.91e-17
Identity = 45/75 (60.00%), Postives = 52/75 (69.33%), Query Frame = 0


Query: 33  MARLMREMGGGNGSFGVA--GDIYLLFWAALFTLCIISTIIFSCSDGMSKERTNSTADVE 92
           M RL RE  G +G  G +  G   + F   L TLCI+STIIFSC+DG+SKE+T S AD E
Sbjct: 1   MVRLWREAAGVDGGVGSSHSGTFLVFFLGLLVTLCILSTIIFSCTDGVSKEKT-SQADTE 60

Query: 93  LYG--CAAGCGAGCG 103
           LYG  CAAGCGAGCG
Sbjct: 61  LYGGGCAAGCGAGCG 74

[Close]

BLAST of MC03g1189 vs. ExPASy TrEMBL
Match: A0A803R005 (Uncharacterized protein OS=Cannabis sativa OX=3483 PE=4 SV=1)

HSP 1 Score: 78.6 bits (192), Expect = 5.40e-17
Identity = 44/75 (58.67%), Postives = 52/75 (69.33%), Query Frame = 0


Query: 33  MARLMREMGGGNGSFGVAGDIYLLFWAA-LFTLCIISTIIFSCSDGMSKERTNSTADVEL 92
           M RL RE+   +G  G     +L+F    L TLCI+STIIFSC+DG+SKE+T S  D EL
Sbjct: 1   MVRLWREVANVDGGVGTGSGAFLIFLLGFLVTLCILSTIIFSCADGVSKEKT-SQGDTEL 60

Query: 93  YG--CAAGCGAGCGA 104
           YG  CAAGCGAGCGA
Sbjct: 61  YGGGCAAGCGAGCGA 74

[Close]

BLAST of MC03g1189 vs. ExPASy TrEMBL
Match: A0A803R004 (Uncharacterized protein OS=Cannabis sativa OX=3483 PE=4 SV=1)

HSP 1 Score: 78.6 bits (192), Expect = 5.40e-17
Identity = 44/75 (58.67%), Postives = 52/75 (69.33%), Query Frame = 0


Query: 33  MARLMREMGGGNGSFGVAGDIYLLFWAA-LFTLCIISTIIFSCSDGMSKERTNSTADVEL 92
           M RL RE+   +G  G     +L+F    L TLCI+STIIFSC+DG+SKE+T S  D EL
Sbjct: 1   MVRLWREVANVDGGVGTGSGAFLIFLLGFLVTLCILSTIIFSCADGVSKEKT-SQGDTEL 60

Query: 93  YG--CAAGCGAGCGA 104
           YG  CAAGCGAGCGA
Sbjct: 61  YGGGCAAGCGAGCGA 74

[Close]

BLAST of MC03g1189 vs. TAIR 10
Match: AT1G68238.1 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). )

HSP 1 Score: 53.9 bits (128), Expect = 8.9e-08
Identity = 27/53 (50.94%), Postives = 33/53 (62.26%), Query Frame = 0


Query: 51  GDIYLLFWAALFTLCIISTIIFSCSDGMSKERTNSTADVELYGCAAGCGAGCG 104
           G++ L  WAA+    +I+ +IFSCSD  SK  TN   DV    CAAGCG GCG
Sbjct: 14  GEVSLYIWAAVVAFSVIAAVIFSCSDRASKPHTND--DVNGSSCAAGCGGGCG 64

[Close]

BLAST of MC03g1189 vs. TAIR 10
Match: AT3G18250.1 (Putative membrane lipoprotein )

HSP 1 Score: 42.7 bits (99), Expect = 2.0e-04
Identity = 22/55 (40.00%), Postives = 32/55 (58.18%), Query Frame = 0


Query: 50  AGDIYLLFWAALFTLCIISTIIFSCSDGMSKERTNSTADVELYGC-AAGCGAGCG 104
           A  ++ + + A+   CI+S ++FSC+DG+S  R  S       GC  AGCG GCG
Sbjct: 21  ASYLFHVVFLAVIGCCILSALLFSCADGVSDNRATSGTSTGGGGCGGAGCGGGCG 75

The following BLAST results are available for this feature:

BLAST of MC03g1189 vs.


Match Name	E-value	Identity	Description

BLAST of MC03g1189 vs. NCBI nr


Match Name	E-value	Identity	Description
KAG6584341.1	2.12e-35	86.49	hypothetical protein SDJN03_20273, partial [Cucurbita argyrosperma subsp. sorori...	[more]
KAE8652552.1	6.50e-33	66.67	hypothetical protein Csa_013579 [Cucumis sativus]	[more]
KAG6572949.1	6.98e-24	73.61	hypothetical protein SDJN03_26836, partial [Cucurbita argyrosperma subsp. sorori...	[more]
XP_015882794.1	1.75e-17	62.16	uncharacterized protein LOC107418606 [Ziziphus jujuba]	[more]
PON38946.1	8.08e-17	60.00	hypothetical protein PanWU01x14_308610 [Parasponia andersonii]	[more]

BLAST of MC03g1189 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A0A0LQU7	9.00e-30	78.67	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G042580 PE=4 SV=1	[more]
A0A6P3ZT85	8.47e-18	62.16	uncharacterized protein LOC107418606 OS=Ziziphus jujuba OX=326968 GN=LOC10741860...	[more]
A0A2P5AQX4	3.91e-17	60.00	Uncharacterized protein OS=Parasponia andersonii OX=3476 GN=PanWU01x14_308610 PE...	[more]
A0A803R005	5.40e-17	58.67	Uncharacterized protein OS=Cannabis sativa OX=3483 PE=4 SV=1	[more]
A0A803R004	5.40e-17	58.67	Uncharacterized protein OS=Cannabis sativa OX=3483 PE=4 SV=1	[more]

BLAST of MC03g1189 vs. TAIR 10


Match Name	E-value	Identity	Description
AT1G68238.1	8.9e-08	50.94	unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biologic...	[more]
AT3G18250.1	2.0e-04	40.00	Putative membrane lipoprotein	[more]

InterPro

Analysis Name: InterPro Annotations of Bitter gourd (Dali-11) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	PANTHER	PTHR37199	TRANSMEMBRANE PROTEIN	coord: 28..104

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
MC03g1189.1	MC03g1189.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
cellular_component	GO:0016020	membrane