MC03g1148 (gene) Bitter gourd (Dali-11) v1

Overview


Name	MC03g1148
Type	gene
Organism	Momordica charantia cv. Dali-11 (Bitter gourd (Dali-11) v1)
Description	zinc-finger homeodomain protein 10-like
Location	MC03: 17648051 .. 17648524 (-)
RNA-Seq Expression	MC03g1148
Synteny	MC03g1148

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

AACTCGAACTACCATTACAGAGAATGCCTTCGAAACCATGCAGCCAGTCTCGGCAGTTACGCCACCGACGGCTGCGGCGAATTCACCCTCGACGACGCCTCCTCTCCGCCCAACCACCTCCACTGCGCCGCCTGCGGCTGCCACCGCAACTTCCACCGCAAACTCACCTACATCGTCGCCCCACGCGCCTCCGCCTCCGACGACGCCCTCAACATCGACTACGACCGCCACGCCGTCGTCGAGTACTCCCCCGCCGCCGACACCGGAAAGAAGCGCTTCCGCACAAAGTTCACGCCCGATCAGAAGGACAAGATGCTCGCATTTGCCGAGAAATTGGGCTGGAAGCTGCAGAGGAAAGATCTCGACGACGAGATCGAGAGGTTCTGCCGGAGCGTGGGCGTCACTCGCCAAGTTTTCAAGGTTTGGATGCACAATCACAAAAATGCCTTCTCTTCTACTTCTGCAGCTTCCACT

mRNA sequence

AACTCGAACTACCATTACAGAGAATGCCTTCGAAACCATGCAGCCAGTCTCGGCAGTTACGCCACCGACGGCTGCGGCGAATTCACCCTCGACGACGCCTCCTCTCCGCCCAACCACCTCCACTGCGCCGCCTGCGGCTGCCACCGCAACTTCCACCGCAAACTCACCTCGTCGCCCCACGCGCCTCCGCCTCCGACGACGCCCTCAACATCGACTACGACCGCCACGCCGTCGTCGAGTACTCCCCCGCCGCCGGGAAAGAAGCGCTTCCGCACAAAGTTCACGCCCGATCAGAAGGACAAGATGCTCGCATTTGCCGAGAAATTGGGCTGGAAGCTGCAGAGGAAAGATCTCGACGACGAGATCGAGAGGTTCTGCCGGAGCGTGGGCGTCACTCGCCAAGTTTTCAAGGTTTGGATGCACAATCACAAAAATGCCTTCTCTTCTACTTCTGCAGCTTCCACT

Coding sequence (CDS)

AACTCGAACTACCATTACAGAGAATGCCTTCGAAACCATGCAGCCAGTCTCGGCAGTTACGCCACCGACGGCTGCGGCGAATTCACCCTCGACGACGCCTCCTCTCCGCCCAACCACCTCCACTGCGCCGCCTGCGGCTGCCACCGCAACTTCCACCGCAAACTCACCTCGTCGCCCCACGCGCCTCCGCCTCCGACGACGCCCTCAACATCGACTACGACCGCCACGCCGTCGTCGAGTACTCCCCCGCCGCCGGGAAAGAAGCGCTTCCGCACAAAGTTCACGCCCGATCAGAAGGACAAGATGCTCGCATTTGCCGAGAAATTGGGCTGGAAGCTGCAGAGGAAAGATCTCGACGACGAGATCGAGAGGTTCTGCCGGAGCGTGGGCGTCACTCGCCAAGTTTTCAAGGTTTGGATGCACAATCACAAAAATGCCTTCTCTTCTACTTCTGCAGCTTCCACT

Protein sequence

NSNYHYRECLRNHAASLGSYATDGCGEFTLDDASSPPNHLHCAACGCHRNFHRKLTSSPHAPPPPTTPSTSTTTATPSSSTPPPPGKKRFRTKFTPDQKDKMLAFAEKLGWKLQRKDLDDEIERFCRSVGVTRQVFKVWMHNHKNAFSSTSAAST

Homology

[Close]

BLAST of MC03g1148 vs. ExPASy Swiss-Prot
Match: Q9LHF0 (Zinc-finger homeodomain protein 9 OS=Arabidopsis thaliana OX=3702 GN=ZHD9 PE=1 SV=1)

HSP 1 Score: 147.5 bits (371), Expect = 1.2e-34
Identity = 87/214 (40.65%), Postives = 119/214 (55.61%), Query Frame = 0


Query: 1   NSNYHYRECLRNHAASLGSYATDGCGEFTLDDASSP--PNHLHCAACGCHRNFHRKLTSS 60
           N+   Y+ECL+NHAA++G +A DGCGEF    +S+P  P  L CAACGCHRNFHR+ T  
Sbjct: 47  NNKVTYKECLKNHAAAIGGHALDGCGEFMPSPSSTPSDPTSLKCAACGCHRNFHRRETDD 106

Query: 61  PHAPPPPTTPSTSTTTA----------------------TPSSSTPPP------------ 120
             A PPP+   +STTTA                      +P+SS+PPP            
Sbjct: 107 SSAVPPPSLLPSSTTTAAIEYQPHHRHHPPPPLAPPLPRSPNSSSPPPISSSYMLLALSG 166

Query: 121 ----------------------PG-KKRFRTKFTPDQKDKMLAFAEKLGWKLQRKDLDDE 156
                                 PG +KRFRTKF+ +QK+KM  FA+++GWK+Q++D +DE
Sbjct: 167 NNKTAPFSDLNFAAAANHLSATPGSRKRFRTKFSSNQKEKMHEFADRIGWKIQKRD-EDE 226

[Close]

BLAST of MC03g1148 vs. ExPASy Swiss-Prot
Match: Q9SB61 (Zinc-finger homeodomain protein 2 OS=Arabidopsis thaliana OX=3702 GN=ZHD1 PE=1 SV=1)

HSP 1 Score: 139.0 bits (349), Expect = 4.4e-32
Identity = 80/171 (46.78%), Postives = 97/171 (56.73%), Query Frame = 0


Query: 6   YRECLRNHAASLGSYATDGCGEFTLDDASSPPNHLHCAACGCHRNFHRKLTSS------- 65
           YRECL+NHA ++G +A DGC EF         + L CAACGCHRNFHRK T S       
Sbjct: 49  YRECLKNHAVNIGGHAVDGCCEFMPSGEDGTLDALKCAACGCHRNFHRKETESIGGRAHR 108

Query: 66  ----------PHAPP-------------PPTTPSTSTTTATPSSSTPPPPGKKRFRTKFT 125
                     PH PP             PP        T+ PSSS       KRFRTKFT
Sbjct: 109 VPTYYNRPPQPHQPPGYLHLTSPAAPYRPPAASGDEEDTSNPSSSGGT---TKRFRTKFT 168

Query: 126 PDQKDKMLAFAEKLGWKLQRKDLDDEIERFCRSVGVTRQVFKVWMHNHKNA 147
            +QK+KMLAFAE+LGW++Q+ D D  +E+FC   GV RQV K+WMHN+KN+
Sbjct: 169 AEQKEKMLAFAERLGWRIQKHD-DVAVEQFCAETGVRRQVLKIWMHNNKNS 215

[Close]

BLAST of MC03g1148 vs. ExPASy Swiss-Prot
Match: B8AX53 (Zinc-finger homeodomain protein 6 OS=Oryza sativa subsp. indica OX=39946 GN=ZHD6 PE=3 SV=1)

HSP 1 Score: 134.8 bits (338), Expect = 8.3e-31
Identity = 85/199 (42.71%), Postives = 110/199 (55.28%), Query Frame = 0


Query: 6   YRECLRNHAASLGSYATDGCGEFTLDDASSPPNHLHCAACGCHRNFHRK----------- 65
           Y ECLRNHAA++G +  DGCGEF +       + L CAACGCHR+FHRK           
Sbjct: 45  YHECLRNHAAAMGGHVVDGCGEF-MPMPGDAADALKCAACGCHRSFHRKDDGQQQQQLRL 104

Query: 66  LTSSPHAP------PPP-------------------------------TTPSTSTTTATP 125
           L  SP  P      PPP                               TT S+S     P
Sbjct: 105 LIPSPPTPRVPLLMPPPQPQPHPHPHPQHPYLHPPFPYHHTPSGSGGTTTESSSEERGPP 164

Query: 126 SSSTPPPPG-KKRFRTKFTPDQKDKMLAFAEKLGWKLQRKDLDDEIERFCRSVGVTRQVF 156
           SSS     G +KRFRTKFTP+QK++MLAFAE++GW++Q++D +  +E+FC  VGV RQVF
Sbjct: 165 SSSAAAAQGRRKRFRTKFTPEQKEQMLAFAERVGWRMQKQD-EALVEQFCAQVGVRRQVF 224

[Close]

BLAST of MC03g1148 vs. ExPASy Swiss-Prot
Match: Q688U3 (Zinc-finger homeodomain protein 6 OS=Oryza sativa subsp. japonica OX=39947 GN=ZHD6 PE=2 SV=1)

HSP 1 Score: 132.5 bits (332), Expect = 4.1e-30
Identity = 84/197 (42.64%), Postives = 109/197 (55.33%), Query Frame = 0


Query: 6   YRECLRNHAASLGSYATDGCGEFTLDDASSPPNHLHCAACGCHRNFHRK----------- 65
           Y ECLRNHAA++G +  DGC EF +       + L CAACGCHR+FHRK           
Sbjct: 45  YHECLRNHAAAMGGHVVDGCREF-MPMPGDAADALKCAACGCHRSFHRKDDGQQQQQLRL 104

Query: 66  LTSSPHAP------PPP-----------------------------TTPSTSTTTATPSS 125
           L  SP  P      PPP                             TT S+S     PSS
Sbjct: 105 LIPSPPTPRVPLLMPPPQPQPHPHPQHPYLHPPFPYHHTPSGSGGTTTESSSEERGPPSS 164

Query: 126 STPPPPG-KKRFRTKFTPDQKDKMLAFAEKLGWKLQRKDLDDEIERFCRSVGVTRQVFKV 156
           S     G +KRFRTKFTP+QK++MLAFAE++GW++Q++D +  +E+FC  VGV RQVFKV
Sbjct: 165 SAAAAQGRRKRFRTKFTPEQKEQMLAFAERVGWRMQKQD-EALVEQFCAQVGVRRQVFKV 224

[Close]

BLAST of MC03g1148 vs. ExPASy Swiss-Prot
Match: Q9FIW9 (Zinc-finger homeodomain protein 10 OS=Arabidopsis thaliana OX=3702 GN=ZHD10 PE=1 SV=1)

HSP 1 Score: 131.3 bits (329), Expect = 9.2e-30
Identity = 81/213 (38.03%), Postives = 108/213 (50.70%), Query Frame = 0


Query: 4   YHYRECLRNHAASLGSYATDGCGEF--TLDDASSPPNHLHCAACGCHRNFHRK----LTS 63
           + Y+ECL+NHAA+LG +A DGCGEF  +    SS P  L CAACGCHRNFHR+       
Sbjct: 54  FTYKECLKNHAAALGGHALDGCGEFMPSPSSISSDPTSLKCAACGCHRNFHRRDPDNNND 113

Query: 64  SPHAPPPPTT--------------PSTSTTTATPSSSTPPP------------------- 123
           S   PPPP+T              P       +P+S++PPP                   
Sbjct: 114 SSQIPPPPSTAVEYQPHHRHHPPPPPPPPPPRSPNSASPPPISSSYMLLSLSGTNNNNNN 173

Query: 124 ------------------------PGKKRFRTKFTPDQKDKMLAFAEKLGWKLQRKDLDD 154
                                     +KRFRTKF+  QK+KM  FAE++GWK+Q++D +D
Sbjct: 174 LASFSDLNFSAGNNHHHHHQHTLHGSRKRFRTKFSQFQKEKMHEFAERVGWKMQKRD-ED 233

[Close]

BLAST of MC03g1148 vs. NCBI nr
Match: XP_022137470.1 (zinc-finger homeodomain protein 10-like [Momordica charantia])

HSP 1 Score: 249 bits (637), Expect = 2.92e-82
Identity = 132/169 (78.11%), Postives = 136/169 (80.47%), Query Frame = 0


Query: 1   NSNYHYRECLRNHAASLGSYATDGCGEFTLDDASSPPNHLHCAACGCHRNFHRKLTS--S 60
           NSNYHYRECLRNHAASLGSYATDGCGEFTLDDASSPPNHLHCAACGCHRNFHRKLT   +
Sbjct: 5   NSNYHYRECLRNHAASLGSYATDGCGEFTLDDASSPPNHLHCAACGCHRNFHRKLTYIVA 64

Query: 61  PHAPPPPTTPSTSTTTA------------TPSSSTPPPPGKKRFRTKFTPDQKDKMLAFA 120
           P A       S S                +P++ T    GKKRFRTKFTPDQKDKMLAFA
Sbjct: 65  PRA-------SASDDALNIDYDRHAVVEYSPAADT----GKKRFRTKFTPDQKDKMLAFA 124

Query: 121 EKLGWKLQRKDLDDEIERFCRSVGVTRQVFKVWMHNHKNAFSSTSAAST 155
           EKLGWKLQRKDLDDEIERFCRSVGVTRQVFKVWMHNHKNAFSSTSAAST
Sbjct: 125 EKLGWKLQRKDLDDEIERFCRSVGVTRQVFKVWMHNHKNAFSSTSAAST 162

[Close]

BLAST of MC03g1148 vs. NCBI nr
Match: XP_022924045.1 (zinc-finger homeodomain protein 8-like [Cucurbita moschata] >XP_023001812.1 zinc-finger homeodomain protein 8-like [Cucurbita maxima] >XP_023519958.1 zinc-finger homeodomain protein 8-like [Cucurbita pepo subsp. pepo] >KAG6584298.1 Zinc-finger homeodomain protein 2, partial [Cucurbita argyrosperma subsp. sororia] >KAG7019891.1 Zinc-finger homeodomain protein 2, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 224 bits (571), Expect = 3.18e-72
Identity = 116/161 (72.05%), Postives = 125/161 (77.64%), Query Frame = 0


Query: 1   NSNYHYRECLRNHAASLGSYATDGCGEFTLDDASSPPNHLHCAACGCHRNFHRKLT---- 60
           NSNYHYRECLRNHAASLGSYATDGCGEFTLDD SSP N+LHC ACGCHRNFHRK+T    
Sbjct: 5   NSNYHYRECLRNHAASLGSYATDGCGEFTLDDTSSPTNNLHCVACGCHRNFHRKITYIAG 64

Query: 61  ----SSPHAPPPPTTPSTSTTTATPSSSTPPPPGKKRFRTKFTPDQKDKMLAFAEKLGWK 120
               S+  A         +T T           GKKRFRTKFT DQ++KMLAFAEKLGWK
Sbjct: 65  GGRSSAATADDLMDYDQAATDTERSGGG-----GKKRFRTKFTADQREKMLAFAEKLGWK 124

Query: 121 LQRKDLDDEIERFCRSVGVTRQVFKVWMHNHKNAFSSTSAA 153
           LQR+DLDDEIERFCRSVGVTRQVFKVWMHNHKN+FSS SA+
Sbjct: 125 LQRRDLDDEIERFCRSVGVTRQVFKVWMHNHKNSFSSNSAS 160

[Close]

BLAST of MC03g1148 vs. NCBI nr
Match: XP_038895089.1 (zinc-finger homeodomain protein 9-like [Benincasa hispida])

HSP 1 Score: 222 bits (566), Expect = 2.56e-71
Identity = 121/172 (70.35%), Postives = 128/172 (74.42%), Query Frame = 0


Query: 1   NSNYHYRECLRNHAASLGSYATDGCGEFTLDDASSPPNHLHCAACGCHRNFHRKLTSSPH 60
           NSNYHYRECLRNHAASLGSYATDGCGEFTLDDASSP N LHCAACGCHRNFHRK+T    
Sbjct: 5   NSNYHYRECLRNHAASLGSYATDGCGEFTLDDASSPANLLHCAACGCHRNFHRKVTYIAG 64

Query: 61  APPPPTTPSTSTTTATP---------------SSSTPPPPG----KKRFRTKFTPDQKDK 120
                    +S  TAT                ++ T    G    KKRFRTKFT DQK+K
Sbjct: 65  GG------RSSAATATDDDLMDYDRHAVVEYAAADTERSGGGGGSKKRFRTKFTADQKEK 124

Query: 121 MLAFAEKLGWKLQRKDLDDEIERFCRSVGVTRQVFKVWMHNHKNAFSSTSAA 153
           MLAFAEKLGWKLQRKDLDDEIERFCRSVGVTRQVFKVWMHNHKN+FSS SA+
Sbjct: 125 MLAFAEKLGWKLQRKDLDDEIERFCRSVGVTRQVFKVWMHNHKNSFSSNSAS 170

[Close]

BLAST of MC03g1148 vs. NCBI nr
Match: XP_004137520.1 (zinc-finger homeodomain protein 9 [Cucumis sativus] >KGN64200.1 hypothetical protein Csa_014376 [Cucumis sativus])

HSP 1 Score: 222 bits (565), Expect = 3.40e-71
Identity = 120/170 (70.59%), Postives = 128/170 (75.29%), Query Frame = 0


Query: 1   NSNYHYRECLRNHAASLGSYATDGCGEFTLDDASSPPNHLHCAACGCHRNFHRKLTSSPH 60
           NSNYHYRECLRNHAASLGSYATDGCGEFTLDD+SSP N LHCAACGCHRNFHRK+T    
Sbjct: 5   NSNYHYRECLRNHAASLGSYATDGCGEFTLDDSSSPANLLHCAACGCHRNFHRKVTYIAG 64

Query: 61  APPPPTTPSTSTTTATP---------------SSSTPPPPG--KKRFRTKFTPDQKDKML 120
                    +S  TAT                ++ T    G  KKRFRTKFT DQK+KML
Sbjct: 65  GG------RSSAATATDDDLMDYDRHAVVEYAAADTERSGGGSKKRFRTKFTADQKEKML 124

Query: 121 AFAEKLGWKLQRKDLDDEIERFCRSVGVTRQVFKVWMHNHKNAFSSTSAA 153
           AFAEKLGWKLQRKDLDDEIERFCRSVGVTRQVFKVWMHNHKN+FSS SA+
Sbjct: 125 AFAEKLGWKLQRKDLDDEIERFCRSVGVTRQVFKVWMHNHKNSFSSNSAS 168

[Close]

BLAST of MC03g1148 vs. NCBI nr
Match: XP_008467173.1 (PREDICTED: zinc-finger homeodomain protein 9-like [Cucumis melo])

HSP 1 Score: 220 bits (560), Expect = 2.09e-70
Identity = 120/171 (70.18%), Postives = 128/171 (74.85%), Query Frame = 0


Query: 1   NSNYHYRECLRNHAASLGSYATDGCGEFTLDDASSPPNHLHCAACGCHRNFHRKLTSSPH 60
           NSNYHYRECLRNHAASLGSYATDGCGEFTLDD+SSP N LHCAACGCHRNFHRK+T    
Sbjct: 5   NSNYHYRECLRNHAASLGSYATDGCGEFTLDDSSSPANLLHCAACGCHRNFHRKVTYIAG 64

Query: 61  APPPPTTPSTSTTTATP---------------SSSTPPPPG---KKRFRTKFTPDQKDKM 120
                    +S  TAT                ++ T    G   KKRFRTKFT DQK+KM
Sbjct: 65  GGG-----RSSAATATDDDLMDYDRHAVVEYAAADTERSGGGGSKKRFRTKFTVDQKEKM 124

Query: 121 LAFAEKLGWKLQRKDLDDEIERFCRSVGVTRQVFKVWMHNHKNAFSSTSAA 153
           LAFAEKLGWKLQRKDLDDEIERFCRSVGVTRQVFKVWMHNHKN+FSS SA+
Sbjct: 125 LAFAEKLGWKLQRKDLDDEIERFCRSVGVTRQVFKVWMHNHKNSFSSNSAS 170

[Close]

BLAST of MC03g1148 vs. ExPASy TrEMBL
Match: A0A6J1C6R0 (zinc-finger homeodomain protein 10-like OS=Momordica charantia OX=3673 GN=LOC111008907 PE=4 SV=1)

HSP 1 Score: 249 bits (637), Expect = 1.42e-82
Identity = 132/169 (78.11%), Postives = 136/169 (80.47%), Query Frame = 0


Query: 1   NSNYHYRECLRNHAASLGSYATDGCGEFTLDDASSPPNHLHCAACGCHRNFHRKLTS--S 60
           NSNYHYRECLRNHAASLGSYATDGCGEFTLDDASSPPNHLHCAACGCHRNFHRKLT   +
Sbjct: 5   NSNYHYRECLRNHAASLGSYATDGCGEFTLDDASSPPNHLHCAACGCHRNFHRKLTYIVA 64

Query: 61  PHAPPPPTTPSTSTTTA------------TPSSSTPPPPGKKRFRTKFTPDQKDKMLAFA 120
           P A       S S                +P++ T    GKKRFRTKFTPDQKDKMLAFA
Sbjct: 65  PRA-------SASDDALNIDYDRHAVVEYSPAADT----GKKRFRTKFTPDQKDKMLAFA 124

Query: 121 EKLGWKLQRKDLDDEIERFCRSVGVTRQVFKVWMHNHKNAFSSTSAAST 155
           EKLGWKLQRKDLDDEIERFCRSVGVTRQVFKVWMHNHKNAFSSTSAAST
Sbjct: 125 EKLGWKLQRKDLDDEIERFCRSVGVTRQVFKVWMHNHKNAFSSTSAAST 162

[Close]

BLAST of MC03g1148 vs. ExPASy TrEMBL
Match: A0A6J1KHP1 (zinc-finger homeodomain protein 8-like OS=Cucurbita maxima OX=3661 GN=LOC111495841 PE=4 SV=1)

HSP 1 Score: 224 bits (571), Expect = 1.54e-72
Identity = 116/161 (72.05%), Postives = 125/161 (77.64%), Query Frame = 0


Query: 1   NSNYHYRECLRNHAASLGSYATDGCGEFTLDDASSPPNHLHCAACGCHRNFHRKLT---- 60
           NSNYHYRECLRNHAASLGSYATDGCGEFTLDD SSP N+LHC ACGCHRNFHRK+T    
Sbjct: 5   NSNYHYRECLRNHAASLGSYATDGCGEFTLDDTSSPTNNLHCVACGCHRNFHRKITYIAG 64

Query: 61  ----SSPHAPPPPTTPSTSTTTATPSSSTPPPPGKKRFRTKFTPDQKDKMLAFAEKLGWK 120
               S+  A         +T T           GKKRFRTKFT DQ++KMLAFAEKLGWK
Sbjct: 65  GGRSSAATADDLMDYDQAATDTERSGGG-----GKKRFRTKFTADQREKMLAFAEKLGWK 124

Query: 121 LQRKDLDDEIERFCRSVGVTRQVFKVWMHNHKNAFSSTSAA 153
           LQR+DLDDEIERFCRSVGVTRQVFKVWMHNHKN+FSS SA+
Sbjct: 125 LQRRDLDDEIERFCRSVGVTRQVFKVWMHNHKNSFSSNSAS 160

[Close]

BLAST of MC03g1148 vs. ExPASy TrEMBL
Match: A0A6J1EDP1 (zinc-finger homeodomain protein 8-like OS=Cucurbita moschata OX=3662 GN=LOC111431593 PE=4 SV=1)

HSP 1 Score: 224 bits (571), Expect = 1.54e-72
Identity = 116/161 (72.05%), Postives = 125/161 (77.64%), Query Frame = 0


Query: 1   NSNYHYRECLRNHAASLGSYATDGCGEFTLDDASSPPNHLHCAACGCHRNFHRKLT---- 60
           NSNYHYRECLRNHAASLGSYATDGCGEFTLDD SSP N+LHC ACGCHRNFHRK+T    
Sbjct: 5   NSNYHYRECLRNHAASLGSYATDGCGEFTLDDTSSPTNNLHCVACGCHRNFHRKITYIAG 64

Query: 61  ----SSPHAPPPPTTPSTSTTTATPSSSTPPPPGKKRFRTKFTPDQKDKMLAFAEKLGWK 120
               S+  A         +T T           GKKRFRTKFT DQ++KMLAFAEKLGWK
Sbjct: 65  GGRSSAATADDLMDYDQAATDTERSGGG-----GKKRFRTKFTADQREKMLAFAEKLGWK 124

Query: 121 LQRKDLDDEIERFCRSVGVTRQVFKVWMHNHKNAFSSTSAA 153
           LQR+DLDDEIERFCRSVGVTRQVFKVWMHNHKN+FSS SA+
Sbjct: 125 LQRRDLDDEIERFCRSVGVTRQVFKVWMHNHKNSFSSNSAS 160

[Close]

BLAST of MC03g1148 vs. ExPASy TrEMBL
Match: A0A0A0LQK4 (Zinc finger homeodomain protein SZF-HD1 OS=Cucumis sativus OX=3659 GN=Csa_1G043040 PE=4 SV=1)

HSP 1 Score: 222 bits (565), Expect = 1.65e-71
Identity = 120/170 (70.59%), Postives = 128/170 (75.29%), Query Frame = 0


Query: 1   NSNYHYRECLRNHAASLGSYATDGCGEFTLDDASSPPNHLHCAACGCHRNFHRKLTSSPH 60
           NSNYHYRECLRNHAASLGSYATDGCGEFTLDD+SSP N LHCAACGCHRNFHRK+T    
Sbjct: 5   NSNYHYRECLRNHAASLGSYATDGCGEFTLDDSSSPANLLHCAACGCHRNFHRKVTYIAG 64

Query: 61  APPPPTTPSTSTTTATP---------------SSSTPPPPG--KKRFRTKFTPDQKDKML 120
                    +S  TAT                ++ T    G  KKRFRTKFT DQK+KML
Sbjct: 65  GG------RSSAATATDDDLMDYDRHAVVEYAAADTERSGGGSKKRFRTKFTADQKEKML 124

Query: 121 AFAEKLGWKLQRKDLDDEIERFCRSVGVTRQVFKVWMHNHKNAFSSTSAA 153
           AFAEKLGWKLQRKDLDDEIERFCRSVGVTRQVFKVWMHNHKN+FSS SA+
Sbjct: 125 AFAEKLGWKLQRKDLDDEIERFCRSVGVTRQVFKVWMHNHKNSFSSNSAS 168

[Close]

BLAST of MC03g1148 vs. ExPASy TrEMBL
Match: A0A1S3CU70 (zinc-finger homeodomain protein 9-like OS=Cucumis melo OX=3656 GN=LOC103504587 PE=4 SV=1)

HSP 1 Score: 220 bits (560), Expect = 1.01e-70
Identity = 120/171 (70.18%), Postives = 128/171 (74.85%), Query Frame = 0


Query: 1   NSNYHYRECLRNHAASLGSYATDGCGEFTLDDASSPPNHLHCAACGCHRNFHRKLTSSPH 60
           NSNYHYRECLRNHAASLGSYATDGCGEFTLDD+SSP N LHCAACGCHRNFHRK+T    
Sbjct: 5   NSNYHYRECLRNHAASLGSYATDGCGEFTLDDSSSPANLLHCAACGCHRNFHRKVTYIAG 64

Query: 61  APPPPTTPSTSTTTATP---------------SSSTPPPPG---KKRFRTKFTPDQKDKM 120
                    +S  TAT                ++ T    G   KKRFRTKFT DQK+KM
Sbjct: 65  GGG-----RSSAATATDDDLMDYDRHAVVEYAAADTERSGGGGSKKRFRTKFTVDQKEKM 124

Query: 121 LAFAEKLGWKLQRKDLDDEIERFCRSVGVTRQVFKVWMHNHKNAFSSTSAA 153
           LAFAEKLGWKLQRKDLDDEIERFCRSVGVTRQVFKVWMHNHKN+FSS SA+
Sbjct: 125 LAFAEKLGWKLQRKDLDDEIERFCRSVGVTRQVFKVWMHNHKNSFSSNSAS 170

[Close]

BLAST of MC03g1148 vs. TAIR 10
Match: AT3G28920.1 (homeobox protein 34 )

HSP 1 Score: 147.5 bits (371), Expect = 8.8e-36
Identity = 87/214 (40.65%), Postives = 119/214 (55.61%), Query Frame = 0


Query: 1   NSNYHYRECLRNHAASLGSYATDGCGEFTLDDASSP--PNHLHCAACGCHRNFHRKLTSS 60
           N+   Y+ECL+NHAA++G +A DGCGEF    +S+P  P  L CAACGCHRNFHR+ T  
Sbjct: 47  NNKVTYKECLKNHAAAIGGHALDGCGEFMPSPSSTPSDPTSLKCAACGCHRNFHRRETDD 106

Query: 61  PHAPPPPTTPSTSTTTA----------------------TPSSSTPPP------------ 120
             A PPP+   +STTTA                      +P+SS+PPP            
Sbjct: 107 SSAVPPPSLLPSSTTTAAIEYQPHHRHHPPPPLAPPLPRSPNSSSPPPISSSYMLLALSG 166

Query: 121 ----------------------PG-KKRFRTKFTPDQKDKMLAFAEKLGWKLQRKDLDDE 156
                                 PG +KRFRTKF+ +QK+KM  FA+++GWK+Q++D +DE
Sbjct: 167 NNKTAPFSDLNFAAAANHLSATPGSRKRFRTKFSSNQKEKMHEFADRIGWKIQKRD-EDE 226

[Close]

BLAST of MC03g1148 vs. TAIR 10
Match: AT4G24660.1 (homeobox protein 22 )

HSP 1 Score: 139.0 bits (349), Expect = 3.1e-33
Identity = 80/171 (46.78%), Postives = 97/171 (56.73%), Query Frame = 0


Query: 6   YRECLRNHAASLGSYATDGCGEFTLDDASSPPNHLHCAACGCHRNFHRKLTSS------- 65
           YRECL+NHA ++G +A DGC EF         + L CAACGCHRNFHRK T S       
Sbjct: 49  YRECLKNHAVNIGGHAVDGCCEFMPSGEDGTLDALKCAACGCHRNFHRKETESIGGRAHR 108

Query: 66  ----------PHAPP-------------PPTTPSTSTTTATPSSSTPPPPGKKRFRTKFT 125
                     PH PP             PP        T+ PSSS       KRFRTKFT
Sbjct: 109 VPTYYNRPPQPHQPPGYLHLTSPAAPYRPPAASGDEEDTSNPSSSGGT---TKRFRTKFT 168

Query: 126 PDQKDKMLAFAEKLGWKLQRKDLDDEIERFCRSVGVTRQVFKVWMHNHKNA 147
            +QK+KMLAFAE+LGW++Q+ D D  +E+FC   GV RQV K+WMHN+KN+
Sbjct: 169 AEQKEKMLAFAERLGWRIQKHD-DVAVEQFCAETGVRRQVLKIWMHNNKNS 215

[Close]

BLAST of MC03g1148 vs. TAIR 10
Match: AT5G39760.1 (homeobox protein 23 )

HSP 1 Score: 131.3 bits (329), Expect = 6.5e-31
Identity = 81/213 (38.03%), Postives = 108/213 (50.70%), Query Frame = 0


Query: 4   YHYRECLRNHAASLGSYATDGCGEF--TLDDASSPPNHLHCAACGCHRNFHRK----LTS 63
           + Y+ECL+NHAA+LG +A DGCGEF  +    SS P  L CAACGCHRNFHR+       
Sbjct: 54  FTYKECLKNHAAALGGHALDGCGEFMPSPSSISSDPTSLKCAACGCHRNFHRRDPDNNND 113

Query: 64  SPHAPPPPTT--------------PSTSTTTATPSSSTPPP------------------- 123
           S   PPPP+T              P       +P+S++PPP                   
Sbjct: 114 SSQIPPPPSTAVEYQPHHRHHPPPPPPPPPPRSPNSASPPPISSSYMLLSLSGTNNNNNN 173

Query: 124 ------------------------PGKKRFRTKFTPDQKDKMLAFAEKLGWKLQRKDLDD 154
                                     +KRFRTKF+  QK+KM  FAE++GWK+Q++D +D
Sbjct: 174 LASFSDLNFSAGNNHHHHHQHTLHGSRKRFRTKFSQFQKEKMHEFAERVGWKMQKRD-ED 233

[Close]

BLAST of MC03g1148 vs. TAIR 10
Match: AT5G65410.1 (homeobox protein 25 )

HSP 1 Score: 130.2 bits (326), Expect = 1.5e-30
Identity = 77/184 (41.85%), Postives = 100/184 (54.35%), Query Frame = 0


Query: 2   SNYHYRECLRNHAASLGSYATDGCGEFTLDDASSPPNHLHCAACGCHRNFHRK-LTSSPH 61
           S + +RECL+N A ++G +A DGCGEF         + L CAACGCHRNFHRK L    H
Sbjct: 71  SRFRFRECLKNQAVNIGGHAVDGCGEFMPAGIEGTIDALKCAACGCHRNFHRKELPYFHH 130

Query: 62  APP---PPTTPSTSTTTATPSSSTPPPPG------------------------------- 121
           APP   PP  P        P S  PPP                                 
Sbjct: 131 APPQHQPPPPPPGFYRLPAPVSYRPPPSQAPPLQLALPPPQRERSEDPMETSSAEAGGGI 190

Query: 122 KKRFRTKFTPDQKDKMLAFAEKLGWKLQRKDLDDEIERFCRSVGVTRQVFKVWMHNHKNA 151
           +KR RTKFT +QK++MLA AE++GW++QR+D D+ I+RFC+  GV RQV KVW+HN+K+ 
Sbjct: 191 RKRHRTKFTAEQKERMLALAERIGWRIQRQD-DEVIQRFCQETGVPRQVLKVWLHNNKHT 250

[Close]

BLAST of MC03g1148 vs. TAIR 10
Match: AT1G14440.1 (homeobox protein 31 )

HSP 1 Score: 127.5 bits (319), Expect = 9.4e-30
Identity = 79/190 (41.58%), Postives = 98/190 (51.58%), Query Frame = 0


Query: 6   YRECLRNHAASLGSYATDGCGEFTLDDASSPPNHLHCAACGCHRNFHRK--------LTS 65
           Y+ECL+NHAA++G  ATDGCGEF           L C+AC CHRNFHRK           
Sbjct: 90  YKECLKNHAAAMGGNATDGCGEFMPSGEDGSIEALTCSACNCHRNFHRKEVEGELAATAM 149

Query: 66  SPHAPPPP---------------------------------------TTPSTSTTTATPS 125
           SP+   PP                                              TTA+ S
Sbjct: 150 SPYHQHPPHRKLMLNHQKIRSAMPHQMIMPIGVSNYRYMHNNSESEDFMEEDGVTTASRS 209

Query: 126 SSTPPPPGKKRFRTKFTPDQKDKMLAFAEKLGWKLQRKDLDDEIERFCRSVGVTRQVFKV 149
               P   KKRFRTKFTP+QK+KML+FAEK+GWK+QR++ D  ++RFC  +GV R+V KV
Sbjct: 210 LPNLPYNQKKRFRTKFTPEQKEKMLSFAEKVGWKIQRQE-DCVVQRFCEEIGVKRRVLKV 269

The following BLAST results are available for this feature:

BLAST of MC03g1148 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9LHF0	1.2e-34	40.65	Zinc-finger homeodomain protein 9 OS=Arabidopsis thaliana OX=3702 GN=ZHD9 PE=1 S...	[more]
Q9SB61	4.4e-32	46.78	Zinc-finger homeodomain protein 2 OS=Arabidopsis thaliana OX=3702 GN=ZHD1 PE=1 S...	[more]
B8AX53	8.3e-31	42.71	Zinc-finger homeodomain protein 6 OS=Oryza sativa subsp. indica OX=39946 GN=ZHD6...	[more]
Q688U3	4.1e-30	42.64	Zinc-finger homeodomain protein 6 OS=Oryza sativa subsp. japonica OX=39947 GN=ZH...	[more]
Q9FIW9	9.2e-30	38.03	Zinc-finger homeodomain protein 10 OS=Arabidopsis thaliana OX=3702 GN=ZHD10 PE=1...	[more]

BLAST of MC03g1148 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022137470.1	2.92e-82	78.11	zinc-finger homeodomain protein 10-like [Momordica charantia]	[more]
XP_022924045.1	3.18e-72	72.05	zinc-finger homeodomain protein 8-like [Cucurbita moschata] >XP_023001812.1 zinc...	[more]
XP_038895089.1	2.56e-71	70.35	zinc-finger homeodomain protein 9-like [Benincasa hispida]	[more]
XP_004137520.1	3.40e-71	70.59	zinc-finger homeodomain protein 9 [Cucumis sativus] >KGN64200.1 hypothetical pro...	[more]
XP_008467173.1	2.09e-70	70.18	PREDICTED: zinc-finger homeodomain protein 9-like [Cucumis melo]	[more]

BLAST of MC03g1148 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1C6R0	1.42e-82	78.11	zinc-finger homeodomain protein 10-like OS=Momordica charantia OX=3673 GN=LOC111...	[more]
A0A6J1KHP1	1.54e-72	72.05	zinc-finger homeodomain protein 8-like OS=Cucurbita maxima OX=3661 GN=LOC1114958...	[more]
A0A6J1EDP1	1.54e-72	72.05	zinc-finger homeodomain protein 8-like OS=Cucurbita moschata OX=3662 GN=LOC11143...	[more]
A0A0A0LQK4	1.65e-71	70.59	Zinc finger homeodomain protein SZF-HD1 OS=Cucumis sativus OX=3659 GN=Csa_1G0430...	[more]
A0A1S3CU70	1.01e-70	70.18	zinc-finger homeodomain protein 9-like OS=Cucumis melo OX=3656 GN=LOC103504587 P...	[more]

BLAST of MC03g1148 vs. TAIR 10


Match Name	E-value	Identity	Description
AT3G28920.1	8.8e-36	40.65	homeobox protein 34	[more]
AT4G24660.1	3.1e-33	46.78	homeobox protein 22	[more]
AT5G39760.1	6.5e-31	38.03	homeobox protein 23	[more]
AT5G65410.1	1.5e-30	41.85	homeobox protein 25	[more]
AT1G14440.1	9.4e-30	41.58	homeobox protein 31	[more]

InterPro

Analysis Name: InterPro Annotations of Bitter gourd (Dali-11) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	GENE3D	1.10.10.60		coord: 71..151 e-value: 2.9E-33 score: 115.5
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 54..96
None	No IPR available	PANTHER	PTHR31948:SF16	ZINC-FINGER HOMEODOMAIN PROTEIN 11	coord: 3..150
None	No IPR available	PANTHER	PTHR31948	ZINC-FINGER HOMEODOMAIN PROTEIN 2	coord: 3..150
IPR006455	Homeodomain, ZF-HD class	TIGRFAM	TIGR01565	TIGR01565	coord: 87..145 e-value: 4.7E-28 score: 94.9
IPR006456	ZF-HD homeobox protein, Cys/His-rich dimerisation domain	PFAM	PF04770	ZF-HD_dimer	coord: 4..55 e-value: 9.4E-25 score: 86.7
IPR006456	ZF-HD homeobox protein, Cys/His-rich dimerisation domain	TIGRFAM	TIGR01566	TIGR01566	coord: 5..54 e-value: 7.8E-23 score: 78.7
IPR006456	ZF-HD homeobox protein, Cys/His-rich dimerisation domain	PROSITE	PS51523	ZF_HD_DIMER	coord: 6..55 score: 23.218397
IPR009057	Homeobox-like domain superfamily	SUPERFAMILY	46689	Homeodomain-like	coord: 76..145

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
MC03g1148.1	MC03g1148.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006355	regulation of transcription, DNA-templated
cellular_component	GO:0005634	nucleus
molecular_function	GO:0003700	DNA-binding transcription factor activity
molecular_function	GO:0000976	transcription cis-regulatory region binding