MC03g0948 (gene) Bitter gourd (Dali-11) v1

Overview


Name	MC03g0948
Type	gene
Organism	Momordica charantia cv. Dali-11 (Bitter gourd (Dali-11) v1)
Description	Protein transport protein Sec61 subunit gamma
Location	MC03: 16115361 .. 16117580 (+)
RNA-Seq Expression	MC03g0948
Synteny	MC03g0948

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSpolypeptideutr3

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGATGCCGTAGATTCAGTGGTCGATCCCCTCAGAGAATTCGCCAAGGACAGCGTTCGTCTCGTTAAGAGGTGTCACAAGCCTGATCGCAAGGGTATTTTTCTTTCTATTGTCAATGTGTTGCGTGGATCTGATTCAATCGAGATCATAGATTTTGTTTTCCTTTTCGGTTTGACTTATACTATATTCTGGTGGTGCAGAATTCACCAAGGTTGCCGTTCGTACCGCTATCGGTTTCGTTGTAATGGGATTTGTAGGGTTCTTTGTCAAGCTAATCTTCATTCCGATCAACAACATCATCGTTGGATCTGGTTAGGTTAGGTATGAATCCAATCCAATAGATCTTCTTTAAGGACGATCTAGTTCCTTTTGGATCTGGCTTGCATTTGTTCTGCATCATGCTCATATTATTGAAGATTTTTGCAATTATGGAACGGATCGGTTACAGAAGTTTGCTTAGTGAAACTTTTGGTGGATGAGCGAGTGCTACCTTACGATGGGATATTAATTTTAAAATTTGCGTTCGATCCACACGCATGCAATATTTATCGACTTTTATGACATTGTGCTACCTCCTCGCTGTGGATTTTCTTCATCTTCCTTTCAAGTTGACTTTGGTTGCCATGGAATGCTCAATTGAAATTAAGAATCGATAGGAAACATTATAGAAGCAGTAGACTCTGTTATATTTTCAGTTAATGTGGTTTTGATATTAAGTCCTGATTTTGTATTTGACCTTAATAATTCTCTTGAGAAATTTTCCAGATCACCGGAACTATTTCCACCCTCTCTTCTCTGTATACTAAACTATAGATTTTGTATTTTTCTAAACGCACTTGGTAGTTTGCTTCTTCCCTTCATCTTCTTTAAATCTTAATGAATGTCTTAAATAGTGTATCATTTGGCGTGCCCCTATCAGAAACTTCGAAGATGAATTATTACTGCACAGCAATGACATGCATATTACGAGCGGGTTGTAGATTGTTACCATTTCTTGTACTCGCCCCTCACAATGTGCATGCAAATGCACTCTTACTCACCTGAAAAACACTCGTTGATTAGAGGGGATAGGTATACCATTTTTCCACCTTCAATTTCTCACTCATTTATCCCTTTATCTTTTTCTTTTCCCCCCATGTTTTACTCCTTTTTTCCCCCTTCAACTGAACTTGAATTCAAGGGAAGGAGGGGCATGTTAAATAGTTATCATATGTCGGTTGACAGAATAATCAAGATTCCGACTGTTTCTGGCCACCTTTGTAGCAACACTGCCCGATCATAGCTGTATCTGGCCACCATTTGGGGTAATATATCACCAGAATCCAGCTATTATATTGGTGTAGGTAGTTCTTTAATGCATGAGGTATGGTGGATTAAATTGGCGTGGAGATGGAAAGTGATGGAGGAGTGATGGAGGCTCTAAGTGTAAAGATTAGAGTAGAGGAGTATCACTTAAGGAGCGTTTAGTTTGCCAACAGCAAAACGAAAAGCTTGGAAATGAGAAACTTGAGAAGTAGATTGTGGGAATAGGATGCTTGTGTTTGGAATGTACAAGGAACGAAGGATGTTGTGGTTAAATATTTTAGTGTAGTATGCATTAGAATGAGAAAACTGAGAATAAACAATTAGGATTGGGATTCCTCTTAATTGTTTCAAGTTGTGATTGCTGATTGATATTCCTCAAGTTAGATCTGCTTATTTTTCCTCTTTTCAATCATCCAAATTGAAAAATTTTCTTTCAAAGGGGTGCATGCATTTCAACGAAAAGTGGTTCCTGGTTTTCTTGTAAAAAAATGTACATTCAGTTCGGTGACTAGATCTCGATATGCTATAATATTCTGAAGATGGTGTCTGTCTTTTAGTTGATTATGGAGTTTGGAAATTTGTTATGGTGTTCTTATTGATGCTTGCAAGGATAGAAATGTGTACCCTTTGTTTAATACTTCAACCCCTCCATTTATTCTCCCCTAATCTTGTTTAAATTTCAGGTCTTGATGAAGTACGTAGGTGATGGCGGCCGCAACCTGTGTTCACTGAGGAATACCTAGCATTTAGCTCTCCTTTAGAACTTCTTTTTAATCCCCGTGCGTAAATTGAGAAACCCCAGGATATGTGGAAAATTTTCTTGTCACATTGAAGAACTCACTTTTTTATTTTTATTTAAATGTTCTAACATGTTCTTTTGGTCTAATATTCGTCTGGAAATTTGTTATTCATAAA

mRNA sequence

ATGGATGCCGTAGATTCAGTGGTCGATCCCCTCAGAGAATTCGCCAAGGACAGCGTTCGTCTCGTTAAGAGGTGTCACAAGCCTGATCGCAAGGGTATTTTTCTTTCTATTGTCAATGTGTTGCAATTCACCAAGGTTGCCGTTCGTACCGCTATCGGTTTCGTTGTAATGGGATTTGTAGGGTTCTTTGTCAAGCTAATCTTCATTCCGATCAACAACATCATCGTTGGATCTGGTTAGGTTAGGTCTTGATGAAGTACGTAGGTGATGGCGGCCGCAACCTGTGTTCACTGAGGAATACCTAGCATTTAGCTCTCCTTTAGAACTTCTTTTTAATCCCCGTGCGTAAATTGAGAAACCCCAGGATATGTGGAAAATTTTCTTGTCACATTGAAGAACTCACTTTTTTATTTTTATTTAAATGTTCTAACATGTTCTTTTGGTCTAATATTCGTCTGGAAATTTGTTATTCATAAA

Coding sequence (CDS)

ATGGATGCCGTAGATTCAGTGGTCGATCCCCTCAGAGAATTCGCCAAGGACAGCGTTCGTCTCGTTAAGAGGTGTCACAAGCCTGATCGCAAGGGTATTTTTCTTTCTATTGTCAATGTGTTGCAATTCACCAAGGTTGCCGTTCGTACCGCTATCGGTTTCGTTGTAATGGGATTTGTAGGGTTCTTTGTCAAGCTAATCTTCATTCCGATCAACAACATCATCGTTGGATCTGGTTAG

Protein sequence

MDAVDSVVDPLREFAKDSVRLVKRCHKPDRKGIFLSIVNVLQFTKVAVRTAIGFVVMGFVGFFVKLIFIPINNIIVGSG

Homology

[Close]

BLAST of MC03g0948 vs. ExPASy Swiss-Prot
Match: P38385 (Protein transport protein Sec61 subunit gamma OS=Oryza sativa subsp. japonica OX=39947 GN=Os02g0178400 PE=3 SV=1)

HSP 1 Score: 124.4 bits (311), Expect = 5.7e-28
Identity = 67/79 (84.81%), Postives = 68/79 (86.08%), Query Frame = 0


Query: 1  MDAVDSVVDPLREFAKDSVRLVKRCHKPDRKGIFLSIVNVLQFTKVAVRTAIGFVVMGFV 60
          MDAVDSVVDPLREFAKDSVRLVKRCHKPDRK          +FTKVA RTAIGFVVMGFV
Sbjct: 1  MDAVDSVVDPLREFAKDSVRLVKRCHKPDRK----------EFTKVAARTAIGFVVMGFV 60

Query: 61 GFFVKLIFIPINNIIVGSG 80
          GFFVKLIFIPINNIIVGSG
Sbjct: 61 GFFVKLIFIPINNIIVGSG 69

[Close]

BLAST of MC03g0948 vs. ExPASy Swiss-Prot
Match: P0DI74 (Protein transport protein Sec61 subunit gamma-1 OS=Arabidopsis thaliana OX=3702 GN=SEC61G1 PE=1 SV=1)

HSP 1 Score: 120.2 bits (300), Expect = 1.1e-26
Identity = 63/78 (80.77%), Postives = 68/78 (87.18%), Query Frame = 0


Query: 1  MDAVDSVVDPLREFAKDSVRLVKRCHKPDRKGIFLSIVNVLQFTKVAVRTAIGFVVMGFV 60
          MDA+DSVVDPLR+FAKDS+RLVKRCHKPDRK          +FTKVAVRTAIGFVVMGFV
Sbjct: 1  MDAIDSVVDPLRDFAKDSIRLVKRCHKPDRK----------EFTKVAVRTAIGFVVMGFV 60

Query: 61 GFFVKLIFIPINNIIVGS 79
          GFFVKLIFIPINNIIVG+
Sbjct: 61 GFFVKLIFIPINNIIVGA 68

[Close]

BLAST of MC03g0948 vs. ExPASy Swiss-Prot
Match: P0DI75 (Protein transport protein Sec61 subunit gamma-2 OS=Arabidopsis thaliana OX=3702 GN=SEC61G2 PE=1 SV=1)

HSP 1 Score: 120.2 bits (300), Expect = 1.1e-26
Identity = 63/78 (80.77%), Postives = 68/78 (87.18%), Query Frame = 0


Query: 1  MDAVDSVVDPLREFAKDSVRLVKRCHKPDRKGIFLSIVNVLQFTKVAVRTAIGFVVMGFV 60
          MDA+DSVVDPLR+FAKDS+RLVKRCHKPDRK          +FTKVAVRTAIGFVVMGFV
Sbjct: 1  MDAIDSVVDPLRDFAKDSIRLVKRCHKPDRK----------EFTKVAVRTAIGFVVMGFV 60

Query: 61 GFFVKLIFIPINNIIVGS 79
          GFFVKLIFIPINNIIVG+
Sbjct: 61 GFFVKLIFIPINNIIVGA 68

[Close]

BLAST of MC03g0948 vs. ExPASy Swiss-Prot
Match: Q9SMP2 (Protein transport protein Sec61 subunit gamma-3 OS=Arabidopsis thaliana OX=3702 GN=SEC61G3 PE=1 SV=1)

HSP 1 Score: 114.0 bits (284), Expect = 7.7e-25
Identity = 59/78 (75.64%), Postives = 66/78 (84.62%), Query Frame = 0


Query: 1  MDAVDSVVDPLREFAKDSVRLVKRCHKPDRKGIFLSIVNVLQFTKVAVRTAIGFVVMGFV 60
          M+A+DS +DPLR+FAK SVRLV+RCHKPDRK          +FTKVAVRTAIGFVVMGFV
Sbjct: 1  MEAIDSAIDPLRDFAKSSVRLVQRCHKPDRK----------EFTKVAVRTAIGFVVMGFV 60

Query: 61 GFFVKLIFIPINNIIVGS 79
          GFFVKL+FIPINNIIVGS
Sbjct: 61 GFFVKLVFIPINNIIVGS 68

[Close]

BLAST of MC03g0948 vs. ExPASy Swiss-Prot
Match: Q7Z1B8 (Protein transport protein Sec61 subunit gamma OS=Gryllotalpa orientalis OX=213494 GN=SEC61G PE=3 SV=1)

HSP 1 Score: 94.4 bits (233), Expect = 6.3e-19
Identity = 50/78 (64.10%), Postives = 58/78 (74.36%), Query Frame = 0


Query: 1  MDAVDSVVDPLREFAKDSVRLVKRCHKPDRKGIFLSIVNVLQFTKVAVRTAIGFVVMGFV 60
          MD V   ++P R+FAKDS+RLVKRC KPDRK          +F K+AV TAIGF +MGF+
Sbjct: 1  MDQVTKFIEPGRQFAKDSIRLVKRCTKPDRK----------EFQKIAVATAIGFCIMGFI 60

Query: 61 GFFVKLIFIPINNIIVGS 79
          GFFVKLI IPINNIIVGS
Sbjct: 61 GFFVKLIHIPINNIIVGS 68

[Close]

BLAST of MC03g0948 vs. NCBI nr
Match: VAI92799.1 (unnamed protein product [Triticum turgidum subsp. durum])

HSP 1 Score: 128 bits (321), Expect = 1.02e-36
Identity = 69/79 (87.34%), Postives = 70/79 (88.61%), Query Frame = 0


Query: 1  MDAVDSVVDPLREFAKDSVRLVKRCHKPDRKGIFLSIVNVLQFTKVAVRTAIGFVVMGFV 60
          MDAVDSVVDPLREFAKDSVRLVKRCHKPDRKG  L      +FTKVA RTAIGFVVMGFV
Sbjct: 1  MDAVDSVVDPLREFAKDSVRLVKRCHKPDRKGFSLR--ACAEFTKVAARTAIGFVVMGFV 60

Query: 61 GFFVKLIFIPINNIIVGSG 79
          GFFVKLIFIPINNIIVGSG
Sbjct: 61 GFFVKLIFIPINNIIVGSG 77

[Close]

BLAST of MC03g0948 vs. NCBI nr
Match: KAF7078485.1 (hypothetical protein CFC21_082911 [Triticum aestivum] >VAI44559.1 unnamed protein product [Triticum turgidum subsp. durum])

HSP 1 Score: 127 bits (318), Expect = 3.20e-36
Identity = 70/83 (84.34%), Postives = 74/83 (89.16%), Query Frame = 0


Query: 1  MDAVDSVVDPLREFAKDSVRLVKRCHKPDRKGI----FLSIVNVLQFTKVAVRTAIGFVV 60
          MDAVDSVVDPLREFAKDSVRLVKRCHKPDRK +    FL+ V   +FTKVA+RTAIGFVV
Sbjct: 1  MDAVDSVVDPLREFAKDSVRLVKRCHKPDRKDLTPYGFLACV---EFTKVAIRTAIGFVV 60

Query: 61 MGFVGFFVKLIFIPINNIIVGSG 79
          MGFVGFFVKLIFIPINNIIVGSG
Sbjct: 61 MGFVGFFVKLIFIPINNIIVGSG 80

[Close]

BLAST of MC03g0948 vs. NCBI nr
Match: VAI56164.1 (unnamed protein product [Triticum turgidum subsp. durum])

HSP 1 Score: 126 bits (317), Expect = 4.17e-36
Identity = 67/79 (84.81%), Postives = 71/79 (89.87%), Query Frame = 0


Query: 1  MDAVDSVVDPLREFAKDSVRLVKRCHKPDRKGIFLSIVNVLQFTKVAVRTAIGFVVMGFV 60
          MDAVDSVVDPLREFAKDSVRLVKRCHKPDRK     ++   +FTKVA+RTAIGFVVMGFV
Sbjct: 1  MDAVDSVVDPLREFAKDSVRLVKRCHKPDRKAY--GLLACAEFTKVAIRTAIGFVVMGFV 60

Query: 61 GFFVKLIFIPINNIIVGSG 79
          GFFVKLIFIPINNIIVGSG
Sbjct: 61 GFFVKLIFIPINNIIVGSG 77

[Close]

BLAST of MC03g0948 vs. NCBI nr
Match: RRT56062.1 (hypothetical protein B296_00047405 [Ensete ventricosum])

HSP 1 Score: 126 bits (317), Expect = 5.57e-36
Identity = 72/87 (82.76%), Postives = 74/87 (85.06%), Query Frame = 0


Query: 1  MDAVDSVVDPLREFAKDSVRLVKRCHKPDRKGIF----LSIVNVLQ----FTKVAVRTAI 60
          MDA+DSVVDPLREFAKDSVRLVKRCHKPDRKG F    L +V  L     FTKVAVRTAI
Sbjct: 1  MDALDSVVDPLREFAKDSVRLVKRCHKPDRKGEFSFSHLDLVPPLDPPDPFTKVAVRTAI 60

Query: 61 GFVVMGFVGFFVKLIFIPINNIIVGSG 79
          GFVVMGFVGFFVKLIFIPINNIIVGSG
Sbjct: 61 GFVVMGFVGFFVKLIFIPINNIIVGSG 87

[Close]

BLAST of MC03g0948 vs. NCBI nr
Match: VAI92800.1 (unnamed protein product [Triticum turgidum subsp. durum])

HSP 1 Score: 126 bits (316), Expect = 5.93e-36
Identity = 69/79 (87.34%), Postives = 70/79 (88.61%), Query Frame = 0


Query: 1  MDAVDSVVDPLREFAKDSVRLVKRCHKPDRKGIFLSIVNVLQFTKVAVRTAIGFVVMGFV 60
          MDAVDSVVDPLREFAKDSVRLVKRCHKPDRKG   S     +FTKVA RTAIGFVVMGFV
Sbjct: 1  MDAVDSVVDPLREFAKDSVRLVKRCHKPDRKG--KSSTADAEFTKVAARTAIGFVVMGFV 60

Query: 61 GFFVKLIFIPINNIIVGSG 79
          GFFVKLIFIPINNIIVGSG
Sbjct: 61 GFFVKLIFIPINNIIVGSG 77

[Close]

BLAST of MC03g0948 vs. ExPASy TrEMBL
Match: A0A446YWH6 (Uncharacterized protein OS=Triticum turgidum subsp. durum OX=4567 GN=TRITD_7Bv1G210650 PE=3 SV=1)

HSP 1 Score: 128 bits (321), Expect = 4.95e-37
Identity = 69/79 (87.34%), Postives = 70/79 (88.61%), Query Frame = 0


Query: 1  MDAVDSVVDPLREFAKDSVRLVKRCHKPDRKGIFLSIVNVLQFTKVAVRTAIGFVVMGFV 60
          MDAVDSVVDPLREFAKDSVRLVKRCHKPDRKG  L      +FTKVA RTAIGFVVMGFV
Sbjct: 1  MDAVDSVVDPLREFAKDSVRLVKRCHKPDRKGFSLR--ACAEFTKVAARTAIGFVVMGFV 60

Query: 61 GFFVKLIFIPINNIIVGSG 79
          GFFVKLIFIPINNIIVGSG
Sbjct: 61 GFFVKLIFIPINNIIVGSG 77

[Close]

BLAST of MC03g0948 vs. ExPASy TrEMBL
Match: A0A446V9P9 (Uncharacterized protein OS=Triticum turgidum subsp. durum OX=4567 GN=TRITD_6Av1G055560 PE=3 SV=1)

HSP 1 Score: 127 bits (318), Expect = 1.55e-36
Identity = 70/83 (84.34%), Postives = 74/83 (89.16%), Query Frame = 0


Query: 1  MDAVDSVVDPLREFAKDSVRLVKRCHKPDRKGI----FLSIVNVLQFTKVAVRTAIGFVV 60
          MDAVDSVVDPLREFAKDSVRLVKRCHKPDRK +    FL+ V   +FTKVA+RTAIGFVV
Sbjct: 1  MDAVDSVVDPLREFAKDSVRLVKRCHKPDRKDLTPYGFLACV---EFTKVAIRTAIGFVV 60

Query: 61 MGFVGFFVKLIFIPINNIIVGSG 79
          MGFVGFFVKLIFIPINNIIVGSG
Sbjct: 61 MGFVGFFVKLIFIPINNIIVGSG 80

[Close]

BLAST of MC03g0948 vs. ExPASy TrEMBL
Match: A0A3B6NN41 (Uncharacterized protein OS=Triticum aestivum OX=4565 PE=3 SV=1)

HSP 1 Score: 127 bits (318), Expect = 1.55e-36
Identity = 70/83 (84.34%), Postives = 74/83 (89.16%), Query Frame = 0


Query: 1  MDAVDSVVDPLREFAKDSVRLVKRCHKPDRKGI----FLSIVNVLQFTKVAVRTAIGFVV 60
          MDAVDSVVDPLREFAKDSVRLVKRCHKPDRK +    FL+ V   +FTKVA+RTAIGFVV
Sbjct: 1  MDAVDSVVDPLREFAKDSVRLVKRCHKPDRKDLTPYGFLACV---EFTKVAIRTAIGFVV 60

Query: 61 MGFVGFFVKLIFIPINNIIVGSG 79
          MGFVGFFVKLIFIPINNIIVGSG
Sbjct: 61 MGFVGFFVKLIFIPINNIIVGSG 80

[Close]

BLAST of MC03g0948 vs. ExPASy TrEMBL
Match: A0A446W7V8 (Uncharacterized protein OS=Triticum turgidum subsp. durum OX=4567 GN=TRITD_6Bv1G066660 PE=3 SV=1)

HSP 1 Score: 126 bits (317), Expect = 2.02e-36
Identity = 67/79 (84.81%), Postives = 71/79 (89.87%), Query Frame = 0


Query: 1  MDAVDSVVDPLREFAKDSVRLVKRCHKPDRKGIFLSIVNVLQFTKVAVRTAIGFVVMGFV 60
          MDAVDSVVDPLREFAKDSVRLVKRCHKPDRK     ++   +FTKVA+RTAIGFVVMGFV
Sbjct: 1  MDAVDSVVDPLREFAKDSVRLVKRCHKPDRKAY--GLLACAEFTKVAIRTAIGFVVMGFV 60

Query: 61 GFFVKLIFIPINNIIVGSG 79
          GFFVKLIFIPINNIIVGSG
Sbjct: 61 GFFVKLIFIPINNIIVGSG 77

[Close]

BLAST of MC03g0948 vs. ExPASy TrEMBL
Match: A0A426YWF9 (Uncharacterized protein OS=Ensete ventricosum OX=4639 GN=B296_00047405 PE=4 SV=1)

HSP 1 Score: 126 bits (317), Expect = 2.70e-36
Identity = 72/87 (82.76%), Postives = 74/87 (85.06%), Query Frame = 0


Query: 1  MDAVDSVVDPLREFAKDSVRLVKRCHKPDRKGIF----LSIVNVLQ----FTKVAVRTAI 60
          MDA+DSVVDPLREFAKDSVRLVKRCHKPDRKG F    L +V  L     FTKVAVRTAI
Sbjct: 1  MDALDSVVDPLREFAKDSVRLVKRCHKPDRKGEFSFSHLDLVPPLDPPDPFTKVAVRTAI 60

Query: 61 GFVVMGFVGFFVKLIFIPINNIIVGSG 79
          GFVVMGFVGFFVKLIFIPINNIIVGSG
Sbjct: 61 GFVVMGFVGFFVKLIFIPINNIIVGSG 87

[Close]

BLAST of MC03g0948 vs. TAIR 10
Match: AT4G24920.1 (secE/sec61-gamma protein transport protein )

HSP 1 Score: 120.2 bits (300), Expect = 7.7e-28
Identity = 63/78 (80.77%), Postives = 68/78 (87.18%), Query Frame = 0


Query: 1  MDAVDSVVDPLREFAKDSVRLVKRCHKPDRKGIFLSIVNVLQFTKVAVRTAIGFVVMGFV 60
          MDA+DSVVDPLR+FAKDS+RLVKRCHKPDRK          +FTKVAVRTAIGFVVMGFV
Sbjct: 1  MDAIDSVVDPLRDFAKDSIRLVKRCHKPDRK----------EFTKVAVRTAIGFVVMGFV 60

Query: 61 GFFVKLIFIPINNIIVGS 79
          GFFVKLIFIPINNIIVG+
Sbjct: 61 GFFVKLIFIPINNIIVGA 68

[Close]

BLAST of MC03g0948 vs. TAIR 10
Match: AT5G50460.1 (secE/sec61-gamma protein transport protein )

HSP 1 Score: 120.2 bits (300), Expect = 7.7e-28
Identity = 63/78 (80.77%), Postives = 68/78 (87.18%), Query Frame = 0


Query: 1  MDAVDSVVDPLREFAKDSVRLVKRCHKPDRKGIFLSIVNVLQFTKVAVRTAIGFVVMGFV 60
          MDA+DSVVDPLR+FAKDS+RLVKRCHKPDRK          +FTKVAVRTAIGFVVMGFV
Sbjct: 1  MDAIDSVVDPLRDFAKDSIRLVKRCHKPDRK----------EFTKVAVRTAIGFVVMGFV 60

Query: 61 GFFVKLIFIPINNIIVGS 79
          GFFVKLIFIPINNIIVG+
Sbjct: 61 GFFVKLIFIPINNIIVGA 68

[Close]

BLAST of MC03g0948 vs. TAIR 10
Match: AT3G48570.1 (secE/sec61-gamma protein transport protein )

HSP 1 Score: 114.0 bits (284), Expect = 5.5e-26
Identity = 59/78 (75.64%), Postives = 66/78 (84.62%), Query Frame = 0


Query: 1  MDAVDSVVDPLREFAKDSVRLVKRCHKPDRKGIFLSIVNVLQFTKVAVRTAIGFVVMGFV 60
          M+A+DS +DPLR+FAK SVRLV+RCHKPDRK          +FTKVAVRTAIGFVVMGFV
Sbjct: 1  MEAIDSAIDPLRDFAKSSVRLVQRCHKPDRK----------EFTKVAVRTAIGFVVMGFV 60

Query: 61 GFFVKLIFIPINNIIVGS 79
          GFFVKL+FIPINNIIVGS
Sbjct: 61 GFFVKLVFIPINNIIVGS 68

The following BLAST results are available for this feature:

BLAST of MC03g0948 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
P38385	5.7e-28	84.81	Protein transport protein Sec61 subunit gamma OS=Oryza sativa subsp. japonica OX...	[more]
P0DI74	1.1e-26	80.77	Protein transport protein Sec61 subunit gamma-1 OS=Arabidopsis thaliana OX=3702 ...	[more]
P0DI75	1.1e-26	80.77	Protein transport protein Sec61 subunit gamma-2 OS=Arabidopsis thaliana OX=3702 ...	[more]
Q9SMP2	7.7e-25	75.64	Protein transport protein Sec61 subunit gamma-3 OS=Arabidopsis thaliana OX=3702 ...	[more]
Q7Z1B8	6.3e-19	64.10	Protein transport protein Sec61 subunit gamma OS=Gryllotalpa orientalis OX=21349...	[more]

BLAST of MC03g0948 vs. NCBI nr


Match Name	E-value	Identity	Description
VAI92799.1	1.02e-36	87.34	unnamed protein product [Triticum turgidum subsp. durum]	[more]
KAF7078485.1	3.20e-36	84.34	hypothetical protein CFC21_082911 [Triticum aestivum] >VAI44559.1 unnamed protei...	[more]
VAI56164.1	4.17e-36	84.81	unnamed protein product [Triticum turgidum subsp. durum]	[more]
RRT56062.1	5.57e-36	82.76	hypothetical protein B296_00047405 [Ensete ventricosum]	[more]
VAI92800.1	5.93e-36	87.34	unnamed protein product [Triticum turgidum subsp. durum]	[more]

BLAST of MC03g0948 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A446YWH6	4.95e-37	87.34	Uncharacterized protein OS=Triticum turgidum subsp. durum OX=4567 GN=TRITD_7Bv1G...	[more]
A0A446V9P9	1.55e-36	84.34	Uncharacterized protein OS=Triticum turgidum subsp. durum OX=4567 GN=TRITD_6Av1G...	[more]
A0A3B6NN41	1.55e-36	84.34	Uncharacterized protein OS=Triticum aestivum OX=4565 PE=3 SV=1	[more]
A0A446W7V8	2.02e-36	84.81	Uncharacterized protein OS=Triticum turgidum subsp. durum OX=4567 GN=TRITD_6Bv1G...	[more]
A0A426YWF9	2.70e-36	82.76	Uncharacterized protein OS=Ensete ventricosum OX=4639 GN=B296_00047405 PE=4 SV=1	[more]

BLAST of MC03g0948 vs. TAIR 10


Match Name	E-value	Identity	Description
AT4G24920.1	7.7e-28	80.77	secE/sec61-gamma protein transport protein	[more]
AT5G50460.1	7.7e-28	80.77	secE/sec61-gamma protein transport protein	[more]
AT3G48570.1	5.5e-26	75.64	secE/sec61-gamma protein transport protein	[more]

InterPro

Analysis Name: InterPro Annotations of Bitter gourd (Dali-11) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR001901	Protein translocase complex, SecE/Sec61-gamma subunit	PFAM	PF00584	SecE	coord: 13..75 e-value: 3.4E-6 score: 26.9
IPR001901	Protein translocase complex, SecE/Sec61-gamma subunit	HAMAP	MF_00422	SecE	coord: 9..74 score: 10.802662
IPR023391	Protein translocase SecE domain superfamily	GENE3D	1.20.5.820	Preprotein translocase SecE subunit	coord: 7..78 e-value: 9.4E-23 score: 81.7
IPR023391	Protein translocase SecE domain superfamily	SUPERFAMILY	103456	Preprotein translocase SecE subunit	coord: 5..75
None	No IPR available	PANTHER	PTHR12309:SF24	PROTEIN TRANSPORT PROTEIN SEC61 SUBUNIT GAMMA-3	coord: 1..79
None	No IPR available	PANTHER	PTHR12309	SEC61 GAMMA SUBUNIT	coord: 1..79

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
MC03g0948.1	MC03g0948.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0031204	posttranslational protein targeting to membrane, translocation
biological_process	GO:0006886	intracellular protein transport
biological_process	GO:0006605	protein targeting
cellular_component	GO:0016021	integral component of membrane
cellular_component	GO:0071261	Ssh1 translocon complex
cellular_component	GO:0016020	membrane
molecular_function	GO:0008320	protein transmembrane transporter activity