MC03g0935 (gene) Bitter gourd (Dali-11) v1

Overview


Name	MC03g0935
Type	gene
Organism	Momordica charantia cv. Dali-11 (Bitter gourd (Dali-11) v1)
Description	protein TAPETUM DETERMINANT 1-like
Location	MC03: 16038066 .. 16039853 (-)
RNA-Seq Expression	MC03g0935
Synteny	MC03g0935

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGATGAAAGACGATCTATCTACTACTACTACTGCTACTCGGCGAGTCTCGGTGATTTTCGCCTCAGTTTTCTTCATCTTCTTTTCGCTGTCTGCGCTCCTTACAGGTCTGAATCATCTCTGGCACTTTATTCTCTGTCGTCCACTGTTTTCTATTTGTTTTTGCTAGGTTTTGATTTGTTGATGCTTATACATCGTCTCTCTGCGGACCTTTCATTTGTCTTCTTCTAGTTTTGTATATTTTATTTGTTTTTCTATCCTTTTCCTCCTTGTTCTCCATCTTCTTTGTCTTCTTATGCTGCATATAGAAACAAAAATGTTTTTCTTATTCTTCTACTTTTTCCATCATCCCTTTCCTCTCATGATTGCAGATCTGGATATTATTGGTTCCTTTATGAACTCCAGTCCCCCGAGTTATCTTCCGCTGGGACTTAACACCACAATAGTTGCTCCTCATCGCAAGCTTCTCCTGACTAGTAAGTTTTTGAAATTTTATTTAATCGAAATTCACTTTTCGAAGAACATTAATGTCAGTAAAAAAATCGCATCGGAGGACTCGAGTTCTGTGTTTGCTGTGTAGATTATTTTGATTTTATTTCGAAGTTATGATCTCGGGGTTGGGGGAAGGGAGAGATTGGATACTCAATTGCCATACATGTTGATTTGGTGTCAGAAGTGCACGCCCGTCCATTCTTAGTAATGGAGCTAAGGCTCAACTTTTGCTAGGTAGCTTTCCAGCCCCCTTCCTAGGCTTTTTAACCTACATGGCCTTTCTGTAGCTGTTTTTGGAGAAATCGTCTTTAATAGATCCCATATGCCCACCGGGTTTTCTTCCTTTTCTGTCCACGATTCATTGATTACATAAAAGCAACCTTTGGCCCGAAAGCCCGGAGCATTATTATGCCTTTCTGAGTATTAGCTTTGTAGCTTCTAATTGATTATATTCATCACCTTTGACGAAGAAGCTCCACCGCTGAGTGTGTATATAAAATTATAATTAAAAGATTACCTGATATGCGTGAACTTCTCTTTAGTGGAATGGCTGAGGAATCATGACACAGCGTTATAAGTTCTATTTTCTAAATTTCGTATGTATACTCTAGATTTTCAATTTTAAAAGTTGTCTTATGTTTAACAAAGTTATTGAAACATTAGAAATGCTCCCGCCGATTTATCTTTTTCAGGGTTTCCCTTTAGCTCCCTCCAGTGCCTTTGAATTTGCTTTATCTTTTAAAATTGATTATTAATTGTGCTTTCTCAACACATCTTTATGACCTCTGAAAGTGTATATTGTGTCTCGGGAGACTTTTTCCCAATTAGTGGGGTTGATATTTATTTGGTGAGAGTAATGTTTGCACGTGGTGATGCCTTGAACAATGCCCAATACACGATTACTAACGGATGACGTCGACCCACCCCCTTTGTTTGTTTGTTTGATTGCGCTTTAGAAGAAGCAACAATTGAGGAACCAACCAGAATTTGGGGTGAAAAGTGTACAAAATCAGACATTGTGATTAACCAAGGCCCCACTGCTCCACTTCCCACTGGAATTCCCACCTACACTGTGGAGGTGGTGAACGCTTGCGTTACTGGGTGTGACATCTATGGCATTCACTTCAAATGCGGCTGGTTCAGCTCAGCCCACCTCATAAACCCCAGAGTTTTCAAGCGCCTTCGCTACGACGACTGCCTGGTGAACGACGGCAAGCCTCTGGTCTACGGAGGCACGCTCTCTTTCCAGTATGCCAACACTTTTCCTTACCCGCTTTCAGTCTCCTCAGTTGTCTGC

mRNA sequence

ATGATGAAAGACGATCTATCTACTACTACTACTGCTACTCGGCGAGTCTCGGTGATTTTCGCCTCAGTTTTCTTCATCTTCTTTTCGCTGTCTGCGCTCCTTACAGATCTGGATATTATTGGTTCCTTTATGAACTCCAGTCCCCCGAGTTATCTTCCGCTGGGACTTAACACCACAATAGTTGCTCCTCATCGCAAGCTTCTCCTGACTAAAGAAGCAACAATTGAGGAACCAACCAGAATTTGGGGTGAAAAGTGTACAAAATCAGACATTGTGATTAACCAAGGCCCCACTGCTCCACTTCCCACTGGAATTCCCACCTACACTGTGGAGGTGGTGAACGCTTGCGTTACTGGGTGTGACATCTATGGCATTCACTTCAAATGCGGCTGGTTCAGCTCAGCCCACCTCATAAACCCCAGAGTTTTCAAGCGCCTTCGCTACGACGACTGCCTGGTGAACGACGGCAAGCCTCTGGTCTACGGAGGCACGCTCTCTTTCCAGTATGCCAACACTTTTCCTTACCCGCTTTCAGTCTCCTCAGTTGTCTGC

Coding sequence (CDS)

ATGATGAAAGACGATCTATCTACTACTACTACTGCTACTCGGCGAGTCTCGGTGATTTTCGCCTCAGTTTTCTTCATCTTCTTTTCGCTGTCTGCGCTCCTTACAGATCTGGATATTATTGGTTCCTTTATGAACTCCAGTCCCCCGAGTTATCTTCCGCTGGGACTTAACACCACAATAGTTGCTCCTCATCGCAAGCTTCTCCTGACTAAAGAAGCAACAATTGAGGAACCAACCAGAATTTGGGGTGAAAAGTGTACAAAATCAGACATTGTGATTAACCAAGGCCCCACTGCTCCACTTCCCACTGGAATTCCCACCTACACTGTGGAGGTGGTGAACGCTTGCGTTACTGGGTGTGACATCTATGGCATTCACTTCAAATGCGGCTGGTTCAGCTCAGCCCACCTCATAAACCCCAGAGTTTTCAAGCGCCTTCGCTACGACGACTGCCTGGTGAACGACGGCAAGCCTCTGGTCTACGGAGGCACGCTCTCTTTCCAGTATGCCAACACTTTTCCTTACCCGCTTTCAGTCTCCTCAGTTGTCTGC

Protein sequence

MMKDDLSTTTTATRRVSVIFASVFFIFFSLSALLTDLDIIGSFMNSSPPSYLPLGLNTTIVAPHRKLLLTKEATIEEPTRIWGEKCTKSDIVINQGPTAPLPTGIPTYTVEVVNACVTGCDIYGIHFKCGWFSSAHLINPRVFKRLRYDDCLVNDGKPLVYGGTLSFQYANTFPYPLSVSSVVC

Homology

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BLAST of MC03g0935 vs. ExPASy Swiss-Prot
Match: Q6TLJ2 (Protein TAPETUM DETERMINANT 1 OS=Arabidopsis thaliana OX=3702 GN=TPD1 PE=1 SV=1)

HSP 1 Score: 165.2 bits (417), Expect = 6.8e-40
Identity = 82/135 (60.74%), Postives = 95/135 (70.37%), Query Frame = 0


Query: 58  TTIVAP---HRKLLLTKEATIE-----EPTRIWGEKCTKSDIVINQGPTAPLPTGIPTYT 117
           TT  +P   HRK+LL    T +     EP RI GEKC  +DIV+NQ  T P+P GIP Y 
Sbjct: 42  TTTSSPSISHRKMLLLSPGTGKTERSVEPERI-GEKCKSTDIVVNQAVTEPMPNGIPGYM 101

Query: 118 VEVVNACVTGCDIYGIHFKCGWFSSAHLINPRVFKRLRYDDCLVNDGKPLVYGGTLSFQY 177
           VE+ N C++GC I  IH  CGWFSSA LINPRVFKR+ YDDCLVN+GKPL +G TLSF Y
Sbjct: 102 VEITNQCMSGCIISRIHINCGWFSSAKLINPRVFKRIHYDDCLVNNGKPLPFGSTLSFHY 161

Query: 178 ANTFPYPLSVSSVVC 185
           ANTFPY LSV+ V C
Sbjct: 162 ANTFPYHLSVAFVTC 175

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BLAST of MC03g0935 vs. ExPASy Swiss-Prot
Match: Q1G3T1 (TPD1 protein homolog 1 OS=Arabidopsis thaliana OX=3702 GN=TDL1 PE=2 SV=1)

HSP 1 Score: 160.6 bits (405), Expect = 1.7e-38
Identity = 76/131 (58.02%), Postives = 97/131 (74.05%), Query Frame = 0


Query: 54  LGLNTTIVAPHRKLLLTKEATIEEPTRIWGEKCTKSDIVINQGPTAPLPTGIPTYTVEVV 113
           + +N    A  RKLLL+ +  I + T   G+ C+K DIV+ QG T PLP+G+P+YTVE+ 
Sbjct: 50  VSINENRTALSRKLLLSPD--IGDGTNRIGQDCSKDDIVLFQGSTNPLPSGVPSYTVEIF 109

Query: 114 NACVTGCDIYGIHFKCGWFSSAHLINPRVFKRLRYDDCLVNDGKPLVYGGTLSFQYANTF 173
           N+CV+ C+I  IH  CGWFSS  L+NPRVF+RL YDDCLVNDG+PL  G +LSFQYAN+F
Sbjct: 110 NSCVSDCNIAEIHVSCGWFSSVRLVNPRVFRRLDYDDCLVNDGQPLGPGQSLSFQYANSF 169

Query: 174 PYPLSVSSVVC 185
            YPLSV+SV C
Sbjct: 170 SYPLSVASVSC 178

[Close]

BLAST of MC03g0935 vs. ExPASy Swiss-Prot
Match: Q2QR54 (TPD1 protein homolog 1A OS=Oryza sativa subsp. japonica OX=39947 GN=TDL1A PE=1 SV=1)

HSP 1 Score: 131.3 bits (329), Expect = 1.1e-29
Identity = 58/101 (57.43%), Postives = 73/101 (72.28%), Query Frame = 0


Query: 90  DIVINQGPTAPLPTGIPTYTVEVVNACVTG------CDIYGIHFKCGWFSSAHLINPRVF 149
           DI I QG   PLP+G+P YTV+V+N C  G      C I GIH +CGWFSS  L++PRVF
Sbjct: 119 DIAIYQGRATPLPSGVPAYTVDVMNRCAGGGGGDEECAIAGIHVRCGWFSSVSLVDPRVF 178

Query: 150 KRLRYDDCLVNDGKPLVYGGTLSFQYANTFPYPLSVSSVVC 185
           +RL +DDCL+NDG+PL+ G T+SF+Y N+FPY LSVS   C
Sbjct: 179 RRLGHDDCLLNDGRPLLAGETVSFEYTNSFPYKLSVSVATC 219

[Close]

BLAST of MC03g0935 vs. ExPASy Swiss-Prot
Match: Q8S6P9 (TPD1 protein homolog 1B OS=Oryza sativa subsp. japonica OX=39947 GN=TDL1B PE=2 SV=1)

HSP 1 Score: 110.2 bits (274), Expect = 2.6e-23
Identity = 46/105 (43.81%), Postives = 72/105 (68.57%), Query Frame = 0


Query: 80  RIWGEKCTKSDIVINQGPTAPLPTGIPTYTVEVVNACVTGCDIYGIHFKCGWFSSAHLIN 139
           R+  + C++ ++V+ Q     LP+GIPTY+VE++N C T C +Y +H  CG F+SA L++
Sbjct: 65  RMQPDSCSEQNVVVYQNNAEHLPSGIPTYSVEIINVC-TACTVYDVHISCGEFASAELVD 124

Query: 140 PRVFKRLRYDDCLVNDGKPLVYGGTLSFQYANTFPYPLSVSSVVC 185
           P  F+R+ ++DCLV  G  L     +SFQY+N+F YPL+V++V C
Sbjct: 125 PSQFQRIGFNDCLVKGGGRLGPSEAVSFQYSNSFAYPLAVANVAC 168

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BLAST of MC03g0935 vs. ExPASy Swiss-Prot
Match: A8MS78 (Uncharacterized protein At1g05835 OS=Arabidopsis thaliana OX=3702 GN=At1g05835 PE=2 SV=1)

HSP 1 Score: 48.5 bits (114), Expect = 9.3e-05
Identity = 28/72 (38.89%), Postives = 39/72 (54.17%), Query Frame = 0


Query: 108 YTVEVVNACVTGCDIYGIHFKCGWFSSAHLINPRVFKRLRYD--DCLVNDGKPLVYGGTL 167
           + VEV+N C   C I  +  KC  F  + L++P   + L     +C+VNDG PL    TL
Sbjct: 48  FRVEVMNKCPM-CPIINLRLKCQGFPQS-LVDPTFLRVLSSSAGNCVVNDGLPLSPMQTL 107

Query: 168 SFQYANTFPYPL 178
           SF Y+NT  + L
Sbjct: 108 SFNYSNTHQFAL 117

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BLAST of MC03g0935 vs. NCBI nr
Match: XP_022137731.1 (protein TAPETUM DETERMINANT 1-like isoform X1 [Momordica charantia] >XP_022137732.1 protein TAPETUM DETERMINANT 1-like isoform X1 [Momordica charantia] >XP_022137733.1 protein TAPETUM DETERMINANT 1-like isoform X1 [Momordica charantia] >XP_022137734.1 protein TAPETUM DETERMINANT 1-like isoform X1 [Momordica charantia] >XP_022137735.1 protein TAPETUM DETERMINANT 1-like isoform X1 [Momordica charantia])

HSP 1 Score: 375 bits (963), Expect = 3.22e-131
Identity = 184/184 (100.00%), Postives = 184/184 (100.00%), Query Frame = 0


Query: 1   MMKDDLSTTTTATRRVSVIFASVFFIFFSLSALLTDLDIIGSFMNSSPPSYLPLGLNTTI 60
           MMKDDLSTTTTATRRVSVIFASVFFIFFSLSALLTDLDIIGSFMNSSPPSYLPLGLNTTI
Sbjct: 1   MMKDDLSTTTTATRRVSVIFASVFFIFFSLSALLTDLDIIGSFMNSSPPSYLPLGLNTTI 60

Query: 61  VAPHRKLLLTKEATIEEPTRIWGEKCTKSDIVINQGPTAPLPTGIPTYTVEVVNACVTGC 120
           VAPHRKLLLTKEATIEEPTRIWGEKCTKSDIVINQGPTAPLPTGIPTYTVEVVNACVTGC
Sbjct: 61  VAPHRKLLLTKEATIEEPTRIWGEKCTKSDIVINQGPTAPLPTGIPTYTVEVVNACVTGC 120

Query: 121 DIYGIHFKCGWFSSAHLINPRVFKRLRYDDCLVNDGKPLVYGGTLSFQYANTFPYPLSVS 180
           DIYGIHFKCGWFSSAHLINPRVFKRLRYDDCLVNDGKPLVYGGTLSFQYANTFPYPLSVS
Sbjct: 121 DIYGIHFKCGWFSSAHLINPRVFKRLRYDDCLVNDGKPLVYGGTLSFQYANTFPYPLSVS 180

Query: 181 SVVC 184
           SVVC
Sbjct: 181 SVVC 184

[Close]

BLAST of MC03g0935 vs. NCBI nr
Match: XP_022137736.1 (protein TAPETUM DETERMINANT 1-like isoform X2 [Momordica charantia])

HSP 1 Score: 369 bits (946), Expect = 1.22e-128
Identity = 183/184 (99.46%), Postives = 183/184 (99.46%), Query Frame = 0


Query: 1   MMKDDLSTTTTATRRVSVIFASVFFIFFSLSALLTDLDIIGSFMNSSPPSYLPLGLNTTI 60
           MMKDDLSTTTTATRRVSVIFASVFFIFFSLSALLTDLDIIGSFMNSSPPSYLPLGLNTTI
Sbjct: 1   MMKDDLSTTTTATRRVSVIFASVFFIFFSLSALLTDLDIIGSFMNSSPPSYLPLGLNTTI 60

Query: 61  VAPHRKLLLTKEATIEEPTRIWGEKCTKSDIVINQGPTAPLPTGIPTYTVEVVNACVTGC 120
           VAPHRKLLLTK ATIEEPTRIWGEKCTKSDIVINQGPTAPLPTGIPTYTVEVVNACVTGC
Sbjct: 61  VAPHRKLLLTK-ATIEEPTRIWGEKCTKSDIVINQGPTAPLPTGIPTYTVEVVNACVTGC 120

Query: 121 DIYGIHFKCGWFSSAHLINPRVFKRLRYDDCLVNDGKPLVYGGTLSFQYANTFPYPLSVS 180
           DIYGIHFKCGWFSSAHLINPRVFKRLRYDDCLVNDGKPLVYGGTLSFQYANTFPYPLSVS
Sbjct: 121 DIYGIHFKCGWFSSAHLINPRVFKRLRYDDCLVNDGKPLVYGGTLSFQYANTFPYPLSVS 180

Query: 181 SVVC 184
           SVVC
Sbjct: 181 SVVC 183

[Close]

BLAST of MC03g0935 vs. NCBI nr
Match: XP_022923940.1 (protein TAPETUM DETERMINANT 1-like [Cucurbita moschata] >XP_022923941.1 protein TAPETUM DETERMINANT 1-like [Cucurbita moschata] >XP_022923942.1 protein TAPETUM DETERMINANT 1-like [Cucurbita moschata] >XP_022923943.1 protein TAPETUM DETERMINANT 1-like [Cucurbita moschata] >KAG6584166.1 Protein TAPETUM DETERMINANT 1, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 332 bits (851), Expect = 3.46e-114
Identity = 166/184 (90.22%), Postives = 173/184 (94.02%), Query Frame = 0


Query: 1   MMKDDLSTTTTATRRVSVIFASVFFIFFSLSALLTDLDIIGSFMNSSPPSYLPLGLNTTI 60
           MMKD LSTT    RRVSVIFASVFFIFF +SA+LTDLDI  SFM+SSPPS+L LGLN+TI
Sbjct: 1   MMKD-LSTT----RRVSVIFASVFFIFFLVSAILTDLDIFHSFMDSSPPSFLRLGLNSTI 60

Query: 61  VAPHRKLLLTKEATIEEPTRIWGEKCTKSDIVINQGPTAPLPTGIPTYTVEVVNACVTGC 120
            APHRKLLLT+EATIEEPTRIWGEKCTKSDIVINQGPTAPLPTGIPTYTVEVVNACVTGC
Sbjct: 61  GAPHRKLLLTREATIEEPTRIWGEKCTKSDIVINQGPTAPLPTGIPTYTVEVVNACVTGC 120

Query: 121 DIYGIHFKCGWFSSAHLINPRVFKRLRYDDCLVNDGKPLVYGGTLSFQYANTFPYPLSVS 180
           DIYGIHFKCGWFSSAHLINPRVFKRL YDDCLVNDGKPLVYGGTLSFQYANT+PYPLSVS
Sbjct: 121 DIYGIHFKCGWFSSAHLINPRVFKRLHYDDCLVNDGKPLVYGGTLSFQYANTYPYPLSVS 179

Query: 181 SVVC 184
           SVVC
Sbjct: 181 SVVC 179

[Close]

BLAST of MC03g0935 vs. NCBI nr
Match: KAG7019756.1 (Protein TAPETUM DETERMINANT 1 [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 328 bits (841), Expect = 4.37e-112
Identity = 158/171 (92.40%), Postives = 165/171 (96.49%), Query Frame = 0


Query: 14  RRVSVIFASVFFIFFSLSALLTDLDIIGSFMNSSPPSYLPLGLNTTIVAPHRKLLLTKEA 73
           RRVSVIFASVFFIFF +SA+LTDLDI  SFM+SSPPS+L LGLN+TI APHRKLLLT+EA
Sbjct: 47  RRVSVIFASVFFIFFLVSAILTDLDIFHSFMDSSPPSFLRLGLNSTIGAPHRKLLLTREA 106

Query: 74  TIEEPTRIWGEKCTKSDIVINQGPTAPLPTGIPTYTVEVVNACVTGCDIYGIHFKCGWFS 133
           TIEEPTRIWGEKCTKSDIVINQGPTAPLPTGIPTYTVEVVNACVTGCDIYGIHFKCGWFS
Sbjct: 107 TIEEPTRIWGEKCTKSDIVINQGPTAPLPTGIPTYTVEVVNACVTGCDIYGIHFKCGWFS 166

Query: 134 SAHLINPRVFKRLRYDDCLVNDGKPLVYGGTLSFQYANTFPYPLSVSSVVC 184
           SAHLINPRVFKRL YDDCLVNDGKPLVYGGTLSFQYANT+PYPLSVSSVVC
Sbjct: 167 SAHLINPRVFKRLHYDDCLVNDGKPLVYGGTLSFQYANTYPYPLSVSSVVC 217

[Close]

BLAST of MC03g0935 vs. NCBI nr
Match: XP_008439976.1 (PREDICTED: protein TAPETUM DETERMINANT 1 [Cucumis melo] >XP_008439984.1 PREDICTED: protein TAPETUM DETERMINANT 1 [Cucumis melo] >XP_008439993.1 PREDICTED: protein TAPETUM DETERMINANT 1 [Cucumis melo] >XP_008440012.1 PREDICTED: protein TAPETUM DETERMINANT 1 [Cucumis melo] >KAA0055349.1 protein TAPETUM DETERMINANT 1 [Cucumis melo var. makuwa])

HSP 1 Score: 323 bits (829), Expect = 7.82e-111
Identity = 160/185 (86.49%), Postives = 171/185 (92.43%), Query Frame = 0


Query: 1   MMKD-DLSTTTTATRRVSVIFASVFFIFFSLSALLTDLDIIGSFMNSSPPSYLPLGLNTT 60
           MMK+   +TTTT TRRVSVIFA V F+FF LSA+LTD +I    M+SSPPS+LPL LNTT
Sbjct: 1   MMKELSTTTTTTTTRRVSVIFALVIFVFFFLSAVLTDSNI----MDSSPPSFLPLNLNTT 60

Query: 61  IVAPHRKLLLTKEATIEEPTRIWGEKCTKSDIVINQGPTAPLPTGIPTYTVEVVNACVTG 120
            VAPHRKLLLT+EATIEEPTRIWGEKCTKSDIVINQGPTAPLPTGIPTYTVEVVNACVTG
Sbjct: 61  TVAPHRKLLLTREATIEEPTRIWGEKCTKSDIVINQGPTAPLPTGIPTYTVEVVNACVTG 120

Query: 121 CDIYGIHFKCGWFSSAHLINPRVFKRLRYDDCLVNDGKPLVYGGTLSFQYANTFPYPLSV 180
           C+IYGIHFKCGWFSSAHLINPRVFKRLRYDDCLVNDGKPLVYGGTLSFQYANT+PYPLSV
Sbjct: 121 CEIYGIHFKCGWFSSAHLINPRVFKRLRYDDCLVNDGKPLVYGGTLSFQYANTYPYPLSV 180

Query: 181 SSVVC 184
           SSV+C
Sbjct: 181 SSVLC 181

[Close]

BLAST of MC03g0935 vs. ExPASy TrEMBL
Match: A0A6J1C840 (protein TAPETUM DETERMINANT 1-like isoform X1 OS=Momordica charantia OX=3673 GN=LOC111009090 PE=4 SV=1)

HSP 1 Score: 375 bits (963), Expect = 1.56e-131
Identity = 184/184 (100.00%), Postives = 184/184 (100.00%), Query Frame = 0


Query: 1   MMKDDLSTTTTATRRVSVIFASVFFIFFSLSALLTDLDIIGSFMNSSPPSYLPLGLNTTI 60
           MMKDDLSTTTTATRRVSVIFASVFFIFFSLSALLTDLDIIGSFMNSSPPSYLPLGLNTTI
Sbjct: 1   MMKDDLSTTTTATRRVSVIFASVFFIFFSLSALLTDLDIIGSFMNSSPPSYLPLGLNTTI 60

Query: 61  VAPHRKLLLTKEATIEEPTRIWGEKCTKSDIVINQGPTAPLPTGIPTYTVEVVNACVTGC 120
           VAPHRKLLLTKEATIEEPTRIWGEKCTKSDIVINQGPTAPLPTGIPTYTVEVVNACVTGC
Sbjct: 61  VAPHRKLLLTKEATIEEPTRIWGEKCTKSDIVINQGPTAPLPTGIPTYTVEVVNACVTGC 120

Query: 121 DIYGIHFKCGWFSSAHLINPRVFKRLRYDDCLVNDGKPLVYGGTLSFQYANTFPYPLSVS 180
           DIYGIHFKCGWFSSAHLINPRVFKRLRYDDCLVNDGKPLVYGGTLSFQYANTFPYPLSVS
Sbjct: 121 DIYGIHFKCGWFSSAHLINPRVFKRLRYDDCLVNDGKPLVYGGTLSFQYANTFPYPLSVS 180

Query: 181 SVVC 184
           SVVC
Sbjct: 181 SVVC 184

[Close]

BLAST of MC03g0935 vs. ExPASy TrEMBL
Match: A0A6J1C7I8 (protein TAPETUM DETERMINANT 1-like isoform X2 OS=Momordica charantia OX=3673 GN=LOC111009090 PE=4 SV=1)

HSP 1 Score: 369 bits (946), Expect = 5.88e-129
Identity = 183/184 (99.46%), Postives = 183/184 (99.46%), Query Frame = 0


Query: 1   MMKDDLSTTTTATRRVSVIFASVFFIFFSLSALLTDLDIIGSFMNSSPPSYLPLGLNTTI 60
           MMKDDLSTTTTATRRVSVIFASVFFIFFSLSALLTDLDIIGSFMNSSPPSYLPLGLNTTI
Sbjct: 1   MMKDDLSTTTTATRRVSVIFASVFFIFFSLSALLTDLDIIGSFMNSSPPSYLPLGLNTTI 60

Query: 61  VAPHRKLLLTKEATIEEPTRIWGEKCTKSDIVINQGPTAPLPTGIPTYTVEVVNACVTGC 120
           VAPHRKLLLTK ATIEEPTRIWGEKCTKSDIVINQGPTAPLPTGIPTYTVEVVNACVTGC
Sbjct: 61  VAPHRKLLLTK-ATIEEPTRIWGEKCTKSDIVINQGPTAPLPTGIPTYTVEVVNACVTGC 120

Query: 121 DIYGIHFKCGWFSSAHLINPRVFKRLRYDDCLVNDGKPLVYGGTLSFQYANTFPYPLSVS 180
           DIYGIHFKCGWFSSAHLINPRVFKRLRYDDCLVNDGKPLVYGGTLSFQYANTFPYPLSVS
Sbjct: 121 DIYGIHFKCGWFSSAHLINPRVFKRLRYDDCLVNDGKPLVYGGTLSFQYANTFPYPLSVS 180

Query: 181 SVVC 184
           SVVC
Sbjct: 181 SVVC 183

[Close]

BLAST of MC03g0935 vs. ExPASy TrEMBL
Match: A0A6J1EDD3 (protein TAPETUM DETERMINANT 1-like OS=Cucurbita moschata OX=3662 GN=LOC111431507 PE=4 SV=1)

HSP 1 Score: 332 bits (851), Expect = 1.68e-114
Identity = 166/184 (90.22%), Postives = 173/184 (94.02%), Query Frame = 0


Query: 1   MMKDDLSTTTTATRRVSVIFASVFFIFFSLSALLTDLDIIGSFMNSSPPSYLPLGLNTTI 60
           MMKD LSTT    RRVSVIFASVFFIFF +SA+LTDLDI  SFM+SSPPS+L LGLN+TI
Sbjct: 1   MMKD-LSTT----RRVSVIFASVFFIFFLVSAILTDLDIFHSFMDSSPPSFLRLGLNSTI 60

Query: 61  VAPHRKLLLTKEATIEEPTRIWGEKCTKSDIVINQGPTAPLPTGIPTYTVEVVNACVTGC 120
            APHRKLLLT+EATIEEPTRIWGEKCTKSDIVINQGPTAPLPTGIPTYTVEVVNACVTGC
Sbjct: 61  GAPHRKLLLTREATIEEPTRIWGEKCTKSDIVINQGPTAPLPTGIPTYTVEVVNACVTGC 120

Query: 121 DIYGIHFKCGWFSSAHLINPRVFKRLRYDDCLVNDGKPLVYGGTLSFQYANTFPYPLSVS 180
           DIYGIHFKCGWFSSAHLINPRVFKRL YDDCLVNDGKPLVYGGTLSFQYANT+PYPLSVS
Sbjct: 121 DIYGIHFKCGWFSSAHLINPRVFKRLHYDDCLVNDGKPLVYGGTLSFQYANTYPYPLSVS 179

Query: 181 SVVC 184
           SVVC
Sbjct: 181 SVVC 179

[Close]

BLAST of MC03g0935 vs. ExPASy TrEMBL
Match: A0A1S3B0P8 (protein TAPETUM DETERMINANT 1 OS=Cucumis melo OX=3656 GN=LOC103484600 PE=4 SV=1)

HSP 1 Score: 323 bits (829), Expect = 3.78e-111
Identity = 160/185 (86.49%), Postives = 171/185 (92.43%), Query Frame = 0


Query: 1   MMKD-DLSTTTTATRRVSVIFASVFFIFFSLSALLTDLDIIGSFMNSSPPSYLPLGLNTT 60
           MMK+   +TTTT TRRVSVIFA V F+FF LSA+LTD +I    M+SSPPS+LPL LNTT
Sbjct: 1   MMKELSTTTTTTTTRRVSVIFALVIFVFFFLSAVLTDSNI----MDSSPPSFLPLNLNTT 60

Query: 61  IVAPHRKLLLTKEATIEEPTRIWGEKCTKSDIVINQGPTAPLPTGIPTYTVEVVNACVTG 120
            VAPHRKLLLT+EATIEEPTRIWGEKCTKSDIVINQGPTAPLPTGIPTYTVEVVNACVTG
Sbjct: 61  TVAPHRKLLLTREATIEEPTRIWGEKCTKSDIVINQGPTAPLPTGIPTYTVEVVNACVTG 120

Query: 121 CDIYGIHFKCGWFSSAHLINPRVFKRLRYDDCLVNDGKPLVYGGTLSFQYANTFPYPLSV 180
           C+IYGIHFKCGWFSSAHLINPRVFKRLRYDDCLVNDGKPLVYGGTLSFQYANT+PYPLSV
Sbjct: 121 CEIYGIHFKCGWFSSAHLINPRVFKRLRYDDCLVNDGKPLVYGGTLSFQYANTYPYPLSV 180

Query: 181 SSVVC 184
           SSV+C
Sbjct: 181 SSVLC 181

[Close]

BLAST of MC03g0935 vs. ExPASy TrEMBL
Match: A0A5A7UPF3 (Protein TAPETUM DETERMINANT 1 OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold80G001940 PE=4 SV=1)

HSP 1 Score: 323 bits (829), Expect = 3.78e-111
Identity = 160/185 (86.49%), Postives = 171/185 (92.43%), Query Frame = 0


Query: 1   MMKD-DLSTTTTATRRVSVIFASVFFIFFSLSALLTDLDIIGSFMNSSPPSYLPLGLNTT 60
           MMK+   +TTTT TRRVSVIFA V F+FF LSA+LTD +I    M+SSPPS+LPL LNTT
Sbjct: 1   MMKELSTTTTTTTTRRVSVIFALVIFVFFFLSAVLTDSNI----MDSSPPSFLPLNLNTT 60

Query: 61  IVAPHRKLLLTKEATIEEPTRIWGEKCTKSDIVINQGPTAPLPTGIPTYTVEVVNACVTG 120
            VAPHRKLLLT+EATIEEPTRIWGEKCTKSDIVINQGPTAPLPTGIPTYTVEVVNACVTG
Sbjct: 61  TVAPHRKLLLTREATIEEPTRIWGEKCTKSDIVINQGPTAPLPTGIPTYTVEVVNACVTG 120

Query: 121 CDIYGIHFKCGWFSSAHLINPRVFKRLRYDDCLVNDGKPLVYGGTLSFQYANTFPYPLSV 180
           C+IYGIHFKCGWFSSAHLINPRVFKRLRYDDCLVNDGKPLVYGGTLSFQYANT+PYPLSV
Sbjct: 121 CEIYGIHFKCGWFSSAHLINPRVFKRLRYDDCLVNDGKPLVYGGTLSFQYANTYPYPLSV 180

Query: 181 SSVVC 184
           SSV+C
Sbjct: 181 SSVLC 181

[Close]

BLAST of MC03g0935 vs. TAIR 10
Match: AT4G24972.1 (tapetum determinant 1 )

HSP 1 Score: 165.2 bits (417), Expect = 4.8e-41
Identity = 82/135 (60.74%), Postives = 95/135 (70.37%), Query Frame = 0


Query: 58  TTIVAP---HRKLLLTKEATIE-----EPTRIWGEKCTKSDIVINQGPTAPLPTGIPTYT 117
           TT  +P   HRK+LL    T +     EP RI GEKC  +DIV+NQ  T P+P GIP Y 
Sbjct: 42  TTTSSPSISHRKMLLLSPGTGKTERSVEPERI-GEKCKSTDIVVNQAVTEPMPNGIPGYM 101

Query: 118 VEVVNACVTGCDIYGIHFKCGWFSSAHLINPRVFKRLRYDDCLVNDGKPLVYGGTLSFQY 177
           VE+ N C++GC I  IH  CGWFSSA LINPRVFKR+ YDDCLVN+GKPL +G TLSF Y
Sbjct: 102 VEITNQCMSGCIISRIHINCGWFSSAKLINPRVFKRIHYDDCLVNNGKPLPFGSTLSFHY 161

Query: 178 ANTFPYPLSVSSVVC 185
           ANTFPY LSV+ V C
Sbjct: 162 ANTFPYHLSVAFVTC 175

[Close]

BLAST of MC03g0935 vs. TAIR 10
Match: AT1G32583.1 (FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; BEST Arabidopsis thaliana protein match is: tapetum determinant 1 (TAIR:AT4G24972.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). )

HSP 1 Score: 160.6 bits (405), Expect = 1.2e-39
Identity = 76/131 (58.02%), Postives = 97/131 (74.05%), Query Frame = 0


Query: 54  LGLNTTIVAPHRKLLLTKEATIEEPTRIWGEKCTKSDIVINQGPTAPLPTGIPTYTVEVV 113
           + +N    A  RKLLL+ +  I + T   G+ C+K DIV+ QG T PLP+G+P+YTVE+ 
Sbjct: 50  VSINENRTALSRKLLLSPD--IGDGTNRIGQDCSKDDIVLFQGSTNPLPSGVPSYTVEIF 109

Query: 114 NACVTGCDIYGIHFKCGWFSSAHLINPRVFKRLRYDDCLVNDGKPLVYGGTLSFQYANTF 173
           N+CV+ C+I  IH  CGWFSS  L+NPRVF+RL YDDCLVNDG+PL  G +LSFQYAN+F
Sbjct: 110 NSCVSDCNIAEIHVSCGWFSSVRLVNPRVFRRLDYDDCLVNDGQPLGPGQSLSFQYANSF 169

Query: 174 PYPLSVSSVVC 185
            YPLSV+SV C
Sbjct: 170 SYPLSVASVSC 178

[Close]

BLAST of MC03g0935 vs. TAIR 10
Match: AT1G05835.1 (PHD finger protein )

HSP 1 Score: 48.5 bits (114), Expect = 6.6e-06
Identity = 28/72 (38.89%), Postives = 39/72 (54.17%), Query Frame = 0


Query: 108 YTVEVVNACVTGCDIYGIHFKCGWFSSAHLINPRVFKRLRYD--DCLVNDGKPLVYGGTL 167
           + VEV+N C   C I  +  KC  F  + L++P   + L     +C+VNDG PL    TL
Sbjct: 48  FRVEVMNKCPM-CPIINLRLKCQGFPQS-LVDPTFLRVLSSSAGNCVVNDGLPLSPMQTL 107

Query: 168 SFQYANTFPYPL 178
           SF Y+NT  + L
Sbjct: 108 SFNYSNTHQFAL 117

The following BLAST results are available for this feature:

BLAST of MC03g0935 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q6TLJ2	6.8e-40	60.74	Protein TAPETUM DETERMINANT 1 OS=Arabidopsis thaliana OX=3702 GN=TPD1 PE=1 SV=1	[more]
Q1G3T1	1.7e-38	58.02	TPD1 protein homolog 1 OS=Arabidopsis thaliana OX=3702 GN=TDL1 PE=2 SV=1	[more]
Q2QR54	1.1e-29	57.43	TPD1 protein homolog 1A OS=Oryza sativa subsp. japonica OX=39947 GN=TDL1A PE=1 S...	[more]
Q8S6P9	2.6e-23	43.81	TPD1 protein homolog 1B OS=Oryza sativa subsp. japonica OX=39947 GN=TDL1B PE=2 S...	[more]
A8MS78	9.3e-05	38.89	Uncharacterized protein At1g05835 OS=Arabidopsis thaliana OX=3702 GN=At1g05835 P...	[more]

BLAST of MC03g0935 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022137731.1	3.22e-131	100.00	protein TAPETUM DETERMINANT 1-like isoform X1 [Momordica charantia] >XP_02213773...	[more]
XP_022137736.1	1.22e-128	99.46	protein TAPETUM DETERMINANT 1-like isoform X2 [Momordica charantia]	[more]
XP_022923940.1	3.46e-114	90.22	protein TAPETUM DETERMINANT 1-like [Cucurbita moschata] >XP_022923941.1 protein ...	[more]
KAG7019756.1	4.37e-112	92.40	Protein TAPETUM DETERMINANT 1 [Cucurbita argyrosperma subsp. argyrosperma]	[more]
XP_008439976.1	7.82e-111	86.49	PREDICTED: protein TAPETUM DETERMINANT 1 [Cucumis melo] >XP_008439984.1 PREDICTE...	[more]

BLAST of MC03g0935 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1C840	1.56e-131	100.00	protein TAPETUM DETERMINANT 1-like isoform X1 OS=Momordica charantia OX=3673 GN=...	[more]
A0A6J1C7I8	5.88e-129	99.46	protein TAPETUM DETERMINANT 1-like isoform X2 OS=Momordica charantia OX=3673 GN=...	[more]
A0A6J1EDD3	1.68e-114	90.22	protein TAPETUM DETERMINANT 1-like OS=Cucurbita moschata OX=3662 GN=LOC111431507...	[more]
A0A1S3B0P8	3.78e-111	86.49	protein TAPETUM DETERMINANT 1 OS=Cucumis melo OX=3656 GN=LOC103484600 PE=4 SV=1	[more]
A0A5A7UPF3	3.78e-111	86.49	Protein TAPETUM DETERMINANT 1 OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_sc...	[more]

BLAST of MC03g0935 vs. TAIR 10


Match Name	E-value	Identity	Description
AT4G24972.1	4.8e-41	60.74	tapetum determinant 1	[more]
AT1G32583.1	1.2e-39	58.02	FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknow...	[more]
AT1G05835.1	6.6e-06	38.89	PHD finger protein	[more]

InterPro

Analysis Name: InterPro Annotations of Bitter gourd (Dali-11) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR040361	Tapetum determinant 1	PANTHER	PTHR33184	PROTEIN TAPETUM DETERMINANT 1-LIKE-RELATED	coord: 14..184
None	No IPR available	PANTHER	PTHR33184:SF67	PROTEIN TAPETUM DETERMINANT 1	coord: 14..184

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
MC03g0935.1	MC03g0935.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0001709	cell fate determination
cellular_component	GO:0016021	integral component of membrane