MC03g0877 (gene) Bitter gourd (Dali-11) v1

Overview
NameMC03g0877
Typegene
OrganismMomordica charantia cv. Dali-11 (Bitter gourd (Dali-11) v1)
DescriptionUnknown protein
LocationMC03: 15437197 .. 15437535 (+)
RNA-Seq ExpressionMC03g0877
SyntenyMC03g0877
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGAGTGTTATATTGACAAGGAAGCAGAGTGGTTACTCAAGAATGGAGAAGGAAGACCCAGAAGAGAAAAAGCATAGGGAAGCTCAGTTCTTGATTTACAAAATAATGGAGCAGGCAAACAGTGGCAGTAGGAGGAGACCCACTTGTCTCAGAATCAGAATTCGCAAGTTTAAGTTGAGGATTGGAAGGAGGTTGAAGAAGCTGAGGAAGAGCATGTCGGCCAGTTTGTCCACAGCAAGAATTGGGATCTGCAAGCAAATTGGACAGCTTAGAACCTGTAAGAGCTTGTTTGGAAGAGGCCGCAAGGTGGAAACTTTAGCTTTTCCTTCTTTGGTTTCT

mRNA sequence

ATGAGTGTTATATTGACAAGGAAGCAGAGTGGTTACTCAAGAATGGAGAAGGAAGACCCAGAAGAGAAAAAGCATAGGGAAGCTCAGTTCTTGATTTACAAAATAATGGAGCAGGCAAACAGTGGCAGTAGGAGGAGACCCACTTGTCTCAGAATCAGAATTCGCAAGTTTAAGTTGAGGATTGGAAGGAGGTTGAAGAAGCTGAGGAAGAGCATGTCGGCCAGTTTGTCCACAGCAAGAATTGGGATCTGCAAGCAAATTGGACAGCTTAGAACCTGTAAGAGCTTGTTTGGAAGAGGCCGCAAGGTGGAAACTTTAGCTTTTCCTTCTTTGGTTTCT

Coding sequence (CDS)

ATGAGTGTTATATTGACAAGGAAGCAGAGTGGTTACTCAAGAATGGAGAAGGAAGACCCAGAAGAGAAAAAGCATAGGGAAGCTCAGTTCTTGATTTACAAAATAATGGAGCAGGCAAACAGTGGCAGTAGGAGGAGACCCACTTGTCTCAGAATCAGAATTCGCAAGTTTAAGTTGAGGATTGGAAGGAGGTTGAAGAAGCTGAGGAAGAGCATGTCGGCCAGTTTGTCCACAGCAAGAATTGGGATCTGCAAGCAAATTGGACAGCTTAGAACCTGTAAGAGCTTGTTTGGAAGAGGCCGCAAGGTGGAAACTTTAGCTTTTCCTTCTTTGGTTTCT

Protein sequence

MSVILTRKQSGYSRMEKEDPEEKKHREAQFLIYKIMEQANSGSRRRPTCLRIRIRKFKLRIGRRLKKLRKSMSASLSTARIGICKQIGQLRTCKSLFGRGRKVETLAFPSLVS
Homology
BLAST of MC03g0877 vs. NCBI nr
Match: XP_022140046.1 (uncharacterized protein LOC111010796 [Momordica charantia])

HSP 1 Score: 214 bits (544), Expect = 1.20e-69
Identity = 113/113 (100.00%), Postives = 113/113 (100.00%), Query Frame = 0

Query: 1   MSVILTRKQSGYSRMEKEDPEEKKHREAQFLIYKIMEQANSGSRRRPTCLRIRIRKFKLR 60
           MSVILTRKQSGYSRMEKEDPEEKKHREAQFLIYKIMEQANSGSRRRPTCLRIRIRKFKLR
Sbjct: 1   MSVILTRKQSGYSRMEKEDPEEKKHREAQFLIYKIMEQANSGSRRRPTCLRIRIRKFKLR 60

Query: 61  IGRRLKKLRKSMSASLSTARIGICKQIGQLRTCKSLFGRGRKVETLAFPSLVS 113
           IGRRLKKLRKSMSASLSTARIGICKQIGQLRTCKSLFGRGRKVETLAFPSLVS
Sbjct: 61  IGRRLKKLRKSMSASLSTARIGICKQIGQLRTCKSLFGRGRKVETLAFPSLVS 113

BLAST of MC03g0877 vs. NCBI nr
Match: KAG6584084.1 (hypothetical protein SDJN03_20016, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 178 bits (451), Expect = 1.77e-55
Identity = 93/113 (82.30%), Postives = 104/113 (92.04%), Query Frame = 0

Query: 1   MSVILTRKQSGYSRMEKEDPEEKKHREAQFLIYKIMEQANSGSRRRPTCLRIRIRKFKLR 60
           MS ++TR+Q+GYSRMEKEDPEEKKHR+AQFLIYKIMEQANSGSRRR +CLRIRIRKFKLR
Sbjct: 1   MSGLVTRRQNGYSRMEKEDPEEKKHRQAQFLIYKIMEQANSGSRRRSSCLRIRIRKFKLR 60

Query: 61  IGRRLKKLRKSMSASLSTARIGICKQIGQLRTCKSLFGRGRKVETLAFPSLVS 113
           IGRRLKKL+K+MS  + TARIGICKQ GQLRTCKSLFGR ++ E LAFPSLVS
Sbjct: 61  IGRRLKKLKKTMSMGICTARIGICKQFGQLRTCKSLFGRAKE-EALAFPSLVS 112

BLAST of MC03g0877 vs. NCBI nr
Match: KAG7019685.1 (hypothetical protein SDJN02_18648, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 175 bits (444), Expect = 2.07e-54
Identity = 92/113 (81.42%), Postives = 103/113 (91.15%), Query Frame = 0

Query: 1   MSVILTRKQSGYSRMEKEDPEEKKHREAQFLIYKIMEQANSGSRRRPTCLRIRIRKFKLR 60
           MS ++TR+Q+GYSRMEKEDPEEKKHR+AQFLIYKIMEQANSGSRRR +CLRIRIRKFKLR
Sbjct: 1   MSGLVTRRQNGYSRMEKEDPEEKKHRQAQFLIYKIMEQANSGSRRRSSCLRIRIRKFKLR 60

Query: 61  IGRRLKKLRKSMSASLSTARIGICKQIGQLRTCKSLFGRGRKVETLAFPSLVS 113
           IGRRLKKL+K+MS  + TAR GICKQ GQLRTCKSLFGR ++ E LAFPSLVS
Sbjct: 61  IGRRLKKLKKTMSMGICTARNGICKQFGQLRTCKSLFGRAKE-EALAFPSLVS 112

BLAST of MC03g0877 vs. NCBI nr
Match: XP_023001322.1 (uncharacterized protein LOC111495486 [Cucurbita maxima])

HSP 1 Score: 172 bits (437), Expect = 2.41e-53
Identity = 91/113 (80.53%), Postives = 102/113 (90.27%), Query Frame = 0

Query: 1   MSVILTRKQSGYSRMEKEDPEEKKHREAQFLIYKIMEQANSGSRRRPTCLRIRIRKFKLR 60
           MS ++TR+Q+GYSRMEKEDPEEKKHR+AQFLIYKIMEQANSG+RRR +CLRIRIRKFKLR
Sbjct: 1   MSGLVTRRQNGYSRMEKEDPEEKKHRQAQFLIYKIMEQANSGTRRRSSCLRIRIRKFKLR 60

Query: 61  IGRRLKKLRKSMSASLSTARIGICKQIGQLRTCKSLFGRGRKVETLAFPSLVS 113
           IGRRLKKL+K+MS    TAR GICKQ GQLRTCKSLFGR ++ E LAFPSLVS
Sbjct: 61  IGRRLKKLKKTMSMGFCTARNGICKQFGQLRTCKSLFGRPKE-EALAFPSLVS 112

BLAST of MC03g0877 vs. NCBI nr
Match: KGN64527.1 (hypothetical protein Csa_013452 [Cucumis sativus])

HSP 1 Score: 159 bits (402), Expect = 5.54e-48
Identity = 82/111 (73.87%), Postives = 100/111 (90.09%), Query Frame = 0

Query: 1   MSVILT-RKQSGYSRMEKEDPEEKKHREAQFLIYKIMEQANSGSRRRPTCLRIRIRKFKL 60
           MSV++T R+  GYS+MEKEDP+EKKHR+AQFLIYKIMEQA++GS+RRP+CLRIRIRKFKL
Sbjct: 1   MSVLMTVRRNGGYSKMEKEDPDEKKHRQAQFLIYKIMEQASNGSKRRPSCLRIRIRKFKL 60

Query: 61  RIGRRLKKLRKSMSASLSTARIGICKQIGQLRTCKSLFGRGRKVETLAFPS 110
           R+GRR KK++K+M+ S STARIGIC Q GQLR+CKSLFG+  KVETL FP+
Sbjct: 61  RMGRRWKKMKKTMAMSFSTARIGICNQFGQLRSCKSLFGK-TKVETLNFPT 110

BLAST of MC03g0877 vs. ExPASy TrEMBL
Match: A0A6J1CEK3 (uncharacterized protein LOC111010796 OS=Momordica charantia OX=3673 GN=LOC111010796 PE=4 SV=1)

HSP 1 Score: 214 bits (544), Expect = 5.81e-70
Identity = 113/113 (100.00%), Postives = 113/113 (100.00%), Query Frame = 0

Query: 1   MSVILTRKQSGYSRMEKEDPEEKKHREAQFLIYKIMEQANSGSRRRPTCLRIRIRKFKLR 60
           MSVILTRKQSGYSRMEKEDPEEKKHREAQFLIYKIMEQANSGSRRRPTCLRIRIRKFKLR
Sbjct: 1   MSVILTRKQSGYSRMEKEDPEEKKHREAQFLIYKIMEQANSGSRRRPTCLRIRIRKFKLR 60

Query: 61  IGRRLKKLRKSMSASLSTARIGICKQIGQLRTCKSLFGRGRKVETLAFPSLVS 113
           IGRRLKKLRKSMSASLSTARIGICKQIGQLRTCKSLFGRGRKVETLAFPSLVS
Sbjct: 61  IGRRLKKLRKSMSASLSTARIGICKQIGQLRTCKSLFGRGRKVETLAFPSLVS 113

BLAST of MC03g0877 vs. ExPASy TrEMBL
Match: A0A6J1KG77 (uncharacterized protein LOC111495486 OS=Cucurbita maxima OX=3661 GN=LOC111495486 PE=4 SV=1)

HSP 1 Score: 172 bits (437), Expect = 1.17e-53
Identity = 91/113 (80.53%), Postives = 102/113 (90.27%), Query Frame = 0

Query: 1   MSVILTRKQSGYSRMEKEDPEEKKHREAQFLIYKIMEQANSGSRRRPTCLRIRIRKFKLR 60
           MS ++TR+Q+GYSRMEKEDPEEKKHR+AQFLIYKIMEQANSG+RRR +CLRIRIRKFKLR
Sbjct: 1   MSGLVTRRQNGYSRMEKEDPEEKKHRQAQFLIYKIMEQANSGTRRRSSCLRIRIRKFKLR 60

Query: 61  IGRRLKKLRKSMSASLSTARIGICKQIGQLRTCKSLFGRGRKVETLAFPSLVS 113
           IGRRLKKL+K+MS    TAR GICKQ GQLRTCKSLFGR ++ E LAFPSLVS
Sbjct: 61  IGRRLKKLKKTMSMGFCTARNGICKQFGQLRTCKSLFGRPKE-EALAFPSLVS 112

BLAST of MC03g0877 vs. ExPASy TrEMBL
Match: A0A0A0LUT4 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G063510 PE=4 SV=1)

HSP 1 Score: 159 bits (402), Expect = 2.68e-48
Identity = 82/111 (73.87%), Postives = 100/111 (90.09%), Query Frame = 0

Query: 1   MSVILT-RKQSGYSRMEKEDPEEKKHREAQFLIYKIMEQANSGSRRRPTCLRIRIRKFKL 60
           MSV++T R+  GYS+MEKEDP+EKKHR+AQFLIYKIMEQA++GS+RRP+CLRIRIRKFKL
Sbjct: 1   MSVLMTVRRNGGYSKMEKEDPDEKKHRQAQFLIYKIMEQASNGSKRRPSCLRIRIRKFKL 60

Query: 61  RIGRRLKKLRKSMSASLSTARIGICKQIGQLRTCKSLFGRGRKVETLAFPS 110
           R+GRR KK++K+M+ S STARIGIC Q GQLR+CKSLFG+  KVETL FP+
Sbjct: 61  RMGRRWKKMKKTMAMSFSTARIGICNQFGQLRSCKSLFGK-TKVETLNFPT 110

BLAST of MC03g0877 vs. ExPASy TrEMBL
Match: W9RFE3 (Uncharacterized protein OS=Morus notabilis OX=981085 GN=L484_006294 PE=4 SV=1)

HSP 1 Score: 117 bits (292), Expect = 1.67e-31
Identity = 66/119 (55.46%), Postives = 87/119 (73.11%), Query Frame = 0

Query: 1   MSVILTRKQSGYSRMEKEDPEEKKHREAQFLIYKIMEQANSGSRRRPTCLRIRIRKFKLR 60
           M+++L RK + YS+++KEDPEE+  R AQFLIYK+MEQA+S SRRRP+ LRIRIRK K++
Sbjct: 1   MALVL-RKPNAYSKIDKEDPEERNRRRAQFLIYKVMEQADSMSRRRPSYLRIRIRKLKVK 60

Query: 61  IGRRLKKLRKSMSASLSTARIGICKQI-GQLRTCKSLFGRGRK------VETLAFPSLV 112
           IG+RL KLRKSM  S+S A++ +CKQ+  Q +TC+ LFG G        V TL  P  V
Sbjct: 61  IGKRLTKLRKSMLLSISAAKVSVCKQVCSQFKTCRRLFGGGDNHSSANLVNTLPSPLFV 118

BLAST of MC03g0877 vs. ExPASy TrEMBL
Match: M5WJH3 (Uncharacterized protein OS=Prunus persica OX=3760 GN=PRUPE_4G022200 PE=4 SV=1)

HSP 1 Score: 116 bits (291), Expect = 1.93e-31
Identity = 65/110 (59.09%), Postives = 82/110 (74.55%), Query Frame = 0

Query: 3   VILTRKQSGYSRMEKEDPEEKKHREAQFLIYKIMEQANSGSRRRPTCLRIRIRKFKLRIG 62
            ++ RK   YS+M+KEDPEE  HR AQFLIYK+++QA +  RRRP  LRIRIRK KL+IG
Sbjct: 2   AVMIRKPYAYSKMDKEDPEEVIHRRAQFLIYKVLQQAET--RRRPVNLRIRIRKLKLKIG 61

Query: 63  RRLKKLRKSMSASLSTARIGICKQI-GQLRTCKSLFGRGRKVETLAFPSL 111
           RRLKKLRKSM  S+S AR+ + KQ+  QL+TCK+LFGRG      + P+L
Sbjct: 62  RRLKKLRKSMLLSISAARVCVYKQVFSQLKTCKTLFGRGEGTIGASLPAL 109

BLAST of MC03g0877 vs. TAIR 10
Match: AT1G11655.1 (unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT4G21902.1); Has 22 Blast hits to 22 proteins in 6 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 22; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). )

HSP 1 Score: 56.6 bits (135), Expect = 1.5e-08
Identity = 38/93 (40.86%), Postives = 60/93 (64.52%), Query Frame = 0

Query: 12  YSRMEKEDPEEKKHREAQFLIYKIMEQANSGSRRRP--TCLRIRIRKFKLRIGRRLKKLR 71
           YS+M+KEDPEE   R A+FLIYK +++A+  SRR P  + +R+++   K++IG+RL KLR
Sbjct: 10  YSKMDKEDPEEVLSRRAKFLIYKTLQEADLISRRDPHSSFIRLKLYLLKVKIGKRLAKLR 69

Query: 72  KSMSASLSTARIGICKQIGQ--LRTCKSLFGRG 101
           +S+   +S  R G  ++     +R  K +F  G
Sbjct: 70  RSV---VSAVRFGGIRKHSHNGVRALKKMFQGG 99

BLAST of MC03g0877 vs. TAIR 10
Match: AT4G04745.1 (unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT4G21902.1); Has 32 Blast hits to 32 proteins in 9 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 32; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). )

HSP 1 Score: 55.1 bits (131), Expect = 4.3e-08
Identity = 31/78 (39.74%), Postives = 52/78 (66.67%), Query Frame = 0

Query: 1   MSVILTRKQSGYSRMEKEDPEEKKHREAQFLIYKIMEQANSGSRRRP-------TCLRIR 60
           M++++      Y++MEKEDP+E  HR AQFLI K++E+A+S +R+           + IR
Sbjct: 26  MALMVKNSPYEYTKMEKEDPQELIHRRAQFLIQKVLERADSKTRQHQQRRRSSGPLIMIR 85

Query: 61  IRKFKLRIGRRLKKLRKS 72
           +   ++RIG++L+KLRK+
Sbjct: 86  VVGIRMRIGKKLRKLRKT 103

BLAST of MC03g0877 vs. TAIR 10
Match: AT4G21902.1 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT4G04745.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). )

HSP 1 Score: 43.9 bits (102), Expect = 1.0e-04
Identity = 27/74 (36.49%), Postives = 50/74 (67.57%), Query Frame = 0

Query: 5  LTRKQSGYSRMEKEDPEEKKHREAQFLIYKIMEQAN----SGSRRRPTCLRI---RIRKF 64
          + +  + Y+++EKED  E  HR AQFLI+KI+++A+       ++R T +++   R+   
Sbjct: 3  MMKNPNQYTKIEKEDLNEIIHRRAQFLIHKILQRADIETLRQQQKRNTTIKLFSFRVVGI 62

Query: 65 KLRIGRRLKKLRKS 72
          +++IG++L+KLRKS
Sbjct: 63 RMKIGKKLRKLRKS 76

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
XP_022140046.11.20e-69100.00uncharacterized protein LOC111010796 [Momordica charantia][more]
KAG6584084.11.77e-5582.30hypothetical protein SDJN03_20016, partial [Cucurbita argyrosperma subsp. sorori... [more]
KAG7019685.12.07e-5481.42hypothetical protein SDJN02_18648, partial [Cucurbita argyrosperma subsp. argyro... [more]
XP_023001322.12.41e-5380.53uncharacterized protein LOC111495486 [Cucurbita maxima][more]
KGN64527.15.54e-4873.87hypothetical protein Csa_013452 [Cucumis sativus][more]
Match NameE-valueIdentityDescription
A0A6J1CEK35.81e-70100.00uncharacterized protein LOC111010796 OS=Momordica charantia OX=3673 GN=LOC111010... [more]
A0A6J1KG771.17e-5380.53uncharacterized protein LOC111495486 OS=Cucurbita maxima OX=3661 GN=LOC111495486... [more]
A0A0A0LUT42.68e-4873.87Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G063510 PE=4 SV=1[more]
W9RFE31.67e-3155.46Uncharacterized protein OS=Morus notabilis OX=981085 GN=L484_006294 PE=4 SV=1[more]
M5WJH31.93e-3159.09Uncharacterized protein OS=Prunus persica OX=3760 GN=PRUPE_4G022200 PE=4 SV=1[more]
Match NameE-valueIdentityDescription
AT1G11655.11.5e-0840.86unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TA... [more]
AT4G04745.14.3e-0839.74unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TA... [more]
AT4G21902.11.0e-0436.49unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biologic... [more]
InterPro
Analysis Name: InterPro Annotations of Bitter gourd (Dali-11) v1
Date Performed: 2021-10-25
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1..23
NoneNo IPR availablePANTHERPTHR35687OS07G0516700 PROTEINcoord: 4..102
NoneNo IPR availablePANTHERPTHR35687:SF1OS07G0516700 PROTEINcoord: 4..102

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
MC03g0877.1MC03g0877.1mRNA