MC03g0835 (gene) Bitter gourd (Dali-11) v1

Overview
NameMC03g0835
Typegene
OrganismMomordica charantia cv. Dali-11 (Bitter gourd (Dali-11) v1)
DescriptionWound-responsive family protein
LocationMC03: 14984708 .. 14984914 (-)
RNA-Seq ExpressionMC03g0835
SyntenyMC03g0835
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGAGCAGGAGAATTTATAACTACAAGGCGGAGATGGGTGGAATGAAGGATCAGACGGCGAAGCGTGAAGCGATGTTGAAGGGGGCGAGAGATCATGATACCATGGCTGTGGATTCGAGTGCGGGAATTGCGGCTAAGGCTGAGAAACTCAAGCGGGCCGAGGAGTCTCTAAGAACGGTTATGTACTTGAGCTGCTGGGGCCCTAAC

mRNA sequence

ATGAGCAGGAGAATTTATAACTACAAGGCGGAGATGGGTGGAATGAAGGATCAGACGGCGAAGCGTGAAGCGATGTTGAAGGGGGCGAGAGATCATGATACCATGGCTGTGGATTCGAGTGCGGGAATTGCGGCTAAGGCTGAGAAACTCAAGCGGGCCGAGGAGTCTCTAAGAACGGTTATGTACTTGAGCTGCTGGGGCCCTAAC

Coding sequence (CDS)

ATGAGCAGGAGAATTTATAACTACAAGGCGGAGATGGGTGGAATGAAGGATCAGACGGCGAAGCGTGAAGCGATGTTGAAGGGGGCGAGAGATCATGATACCATGGCTGTGGATTCGAGTGCGGGAATTGCGGCTAAGGCTGAGAAACTCAAGCGGGCCGAGGAGTCTCTAAGAACGGTTATGTACTTGAGCTGCTGGGGCCCTAAC

Protein sequence

MSRRIYNYKAEMGGMKDQTAKREAMLKGARDHDTMAVDSSAGIAAKAEKLKRAEESLRTVMYLSCWGPN
Homology
BLAST of MC03g0835 vs. NCBI nr
Match: KAG7019649.1 (hypothetical protein SDJN02_18612, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 94.4 bits (233), Expect = 1.84e-23
Identity = 53/80 (66.25%), Postives = 57/80 (71.25%), Query Frame = 0

Query: 1  MSRRIYNYKAEMGGMKDQTAKREAMLKGARDHDTMA-----------VDSSAGIAAKAEK 60
          MSRR Y  K E+ GMKD TAKREAMLK  RDH   +           +DSSA +AAKAEK
Sbjct: 1  MSRRFY--KGEISGMKDPTAKREAMLKAVRDHSGSSSNQGARGFYSGMDSSAAMAAKAEK 60

Query: 61 LKRAEESLRTVMYLSCWGPN 69
          LKRAEESLRTVMYLSCWGPN
Sbjct: 61 LKRAEESLRTVMYLSCWGPN 78

BLAST of MC03g0835 vs. NCBI nr
Match: KAG6573231.1 (hypothetical protein SDJN03_27118, partial [Cucurbita argyrosperma subsp. sororia] >KAG7012404.1 hypothetical protein SDJN02_25156, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 77.0 bits (188), Expect = 4.99e-16
Identity = 43/71 (60.56%), Postives = 46/71 (64.79%), Query Frame = 0

Query: 8   YKAEMGGMKDQTAKREAMLKGARDHD---------TMAVDSSAGIAAKAEKLKRAEESLR 67
           Y  E GGM DQ A+RE   KG RD             AV S A +AAKAEK+KRAEESLR
Sbjct: 59  YGGETGGMNDQRAEREPAAKGLRDPSGSSSQTTGFCSAVGSIAAMAAKAEKVKRAEESLR 118

Query: 68  TVMYLSCWGPN 69
           TVMYLSCWGPN
Sbjct: 119 TVMYLSCWGPN 129

BLAST of MC03g0835 vs. NCBI nr
Match: KAG6584036.1 (hypothetical protein SDJN03_19968, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 67.8 bits (164), Expect = 6.71e-12
Identity = 42/69 (60.87%), Postives = 46/69 (66.67%), Query Frame = 0

Query: 1  MSRRIYNYKAEMGGMKDQTAKREAMLKGARDHDTMA-----------VDSSAGIAAKAEK 58
          MSRR Y  K E+ GMKD TAKREAMLK  RDH   +           +DSSA +AAKAEK
Sbjct: 1  MSRRFY--KGEISGMKDPTAKREAMLKAVRDHSGSSSNQGARGFYSGMDSSAAMAAKAEK 60

BLAST of MC03g0835 vs. NCBI nr
Match: KAG2685240.1 (hypothetical protein I3760_10G115700 [Carya illinoinensis] >KAG6639675.1 hypothetical protein CIPAW_10G117600 [Carya illinoinensis] >KAG6692492.1 hypothetical protein I3842_10G116900 [Carya illinoinensis] >KAG7960177.1 hypothetical protein I3843_10G109900 [Carya illinoinensis])

HSP 1 Score: 64.3 bits (155), Expect = 1.70e-11
Identity = 35/69 (50.72%), Postives = 46/69 (66.67%), Query Frame = 0

Query: 12 MGGMKDQTAKREAMLKGARDHDTM-----------AVDSSAGIAAKAEKLKRAEESLRTV 69
          M GMKDQ +KR++ +K  RD  +            AVDS++  A+  +K+K+AEESLRTV
Sbjct: 18 MQGMKDQASKRDSTVKSLRDCVSSSSRQARHLSAGAVDSASFKASNNDKIKQAEESLRTV 77

BLAST of MC03g0835 vs. NCBI nr
Match: PIN05562.1 (hypothetical protein CDL12_21899 [Handroanthus impetiginosus])

HSP 1 Score: 63.2 bits (152), Expect = 3.99e-11
Identity = 34/66 (51.52%), Postives = 46/66 (69.70%), Query Frame = 0

Query: 12 MGGMKDQTAKREAMLKGARDHDTMAVDS------SAGI--AAKAEKLKRAEESLRTVMYL 69
          M G+KDQ +K ++++K  +D  +  V        S G+  AAK+EK+K+AEESLRTVMYL
Sbjct: 13 MQGIKDQVSKCDSVIKSFKDSSSRQVRKFSSAIESTGLKGAAKSEKIKQAEESLRTVMYL 72

BLAST of MC03g0835 vs. ExPASy TrEMBL
Match: A0A2G9GK33 (Uncharacterized protein OS=Handroanthus impetiginosus OX=429701 GN=CDL12_21899 PE=4 SV=1)

HSP 1 Score: 63.2 bits (152), Expect = 1.93e-11
Identity = 34/66 (51.52%), Postives = 46/66 (69.70%), Query Frame = 0

Query: 12 MGGMKDQTAKREAMLKGARDHDTMAVDS------SAGI--AAKAEKLKRAEESLRTVMYL 69
          M G+KDQ +K ++++K  +D  +  V        S G+  AAK+EK+K+AEESLRTVMYL
Sbjct: 13 MQGIKDQVSKCDSVIKSFKDSSSRQVRKFSSAIESTGLKGAAKSEKIKQAEESLRTVMYL 72

BLAST of MC03g0835 vs. ExPASy TrEMBL
Match: A0A7N2LSL0 (Uncharacterized protein OS=Quercus lobata OX=97700 PE=4 SV=1)

HSP 1 Score: 62.4 bits (150), Expect = 4.29e-11
Identity = 38/82 (46.34%), Postives = 49/82 (59.76%), Query Frame = 0

Query: 1  MSRRIYNYKAEM-GGMKDQTAKREAMLKGARDHD------------TMAVDSSAGIAAKA 60
          MSR +Y     +  GMKDQ +K ++ +   RD              + A DS+A  AA +
Sbjct: 1  MSRSLYQSGMRVIQGMKDQASKCDSTVNSLRDSAYSSSSSKQARLFSTACDSAAYKAANS 60

Query: 61 EKLKRAEESLRTVMYLSCWGPN 69
          EK+K+AEESLRTVMYLSCWGPN
Sbjct: 61 EKIKQAEESLRTVMYLSCWGPN 82

BLAST of MC03g0835 vs. ExPASy TrEMBL
Match: A0A6A1WD78 (Uncharacterized protein OS=Morella rubra OX=262757 GN=CJ030_MR2G006876 PE=4 SV=1)

HSP 1 Score: 61.2 bits (147), Expect = 1.32e-10
Identity = 33/68 (48.53%), Postives = 44/68 (64.71%), Query Frame = 0

Query: 12 MGGMKDQTAKREAMLKGARDHDTM----------AVDSSAGIAAKAEKLKRAEESLRTVM 69
          M GMKDQ +K ++ +K  +D              AVD++   +A+ EK+K+AEESLRTVM
Sbjct: 18 MHGMKDQASKCDSTVKSLKDSGCSSSRQARRFSGAVDTADFTSARNEKVKQAEESLRTVM 77

BLAST of MC03g0835 vs. ExPASy TrEMBL
Match: A0A0A0LV05 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G071850 PE=4 SV=1)

HSP 1 Score: 60.5 bits (145), Expect = 1.75e-10
Identity = 35/68 (51.47%), Postives = 43/68 (63.24%), Query Frame = 0

Query: 15 MKDQTAKREAMLKGA-----------RDHDTMAVDSSAG--IAAKAEKLKRAEESLRTVM 69
          MKD T K+E ML+G            R H   + + +A   + +KAE+LKRAEESLRTVM
Sbjct: 1  MKDPTLKQEPMLEGPLRDHHHHHHRRRHHSESSSNQTAVPVVLSKAEQLKRAEESLRTVM 60

BLAST of MC03g0835 vs. ExPASy TrEMBL
Match: A0A1R3H3Y0 (Uncharacterized protein OS=Corchorus olitorius OX=93759 GN=COLO4_31599 PE=4 SV=1)

HSP 1 Score: 60.8 bits (146), Expect = 1.92e-10
Identity = 34/67 (50.75%), Postives = 43/67 (64.18%), Query Frame = 0

Query: 14 GMKDQTAKREAMLKGARDHDTMA-----------VDSSAGIAAKAEKLKRAEESLRTVMY 69
          GMKDQ +K E+ L+  +D  + +           VDS A  AA  E+L++AEESLRTVMY
Sbjct: 20 GMKDQASKCESNLRSLKDSASSSSSKQARRFSNTVDSGAFKAATNERLRQAEESLRTVMY 79

BLAST of MC03g0835 vs. TAIR 10
Match: AT4G10270.1 (Wound-responsive family protein )

HSP 1 Score: 49.7 bits (117), Expect = 1.1e-06
Identity = 21/34 (61.76%), Postives = 28/34 (82.35%), Query Frame = 0

Query: 36 AVDSSAGIAAKAEKLKRAEESLRTVMYLSCWGPN 70
          +V ++   + ++EK K+AEESLRTVMYLSCWGPN
Sbjct: 57 SVSAAVTSSGESEKAKKAEESLRTVMYLSCWGPN 90

BLAST of MC03g0835 vs. TAIR 10
Match: AT4G05070.1 (Wound-responsive family protein )

HSP 1 Score: 44.3 bits (103), Expect = 4.7e-05
Identity = 20/31 (64.52%), Postives = 27/31 (87.10%), Query Frame = 0

Query: 37 VDSSAGIAAKAEKLKRAEESLRTVMYLSCWG 68
          ++SS   AA +E+L++AEESLRTVM+LSCWG
Sbjct: 55 LESSRFGAAASERLRQAEESLRTVMFLSCWG 85

BLAST of MC03g0835 vs. TAIR 10
Match: AT4G10265.1 (Wound-responsive family protein )

HSP 1 Score: 43.9 bits (102), Expect = 6.1e-05
Identity = 18/21 (85.71%), Postives = 20/21 (95.24%), Query Frame = 0

Query: 49 KLKRAEESLRTVMYLSCWGPN 70
          K K+AEESLRTVMYLSCWGP+
Sbjct: 63 KTKQAEESLRTVMYLSCWGPS 83

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
KAG7019649.11.84e-2366.25hypothetical protein SDJN02_18612, partial [Cucurbita argyrosperma subsp. argyro... [more]
KAG6573231.14.99e-1660.56hypothetical protein SDJN03_27118, partial [Cucurbita argyrosperma subsp. sorori... [more]
KAG6584036.16.71e-1260.87hypothetical protein SDJN03_19968, partial [Cucurbita argyrosperma subsp. sorori... [more]
KAG2685240.11.70e-1150.72hypothetical protein I3760_10G115700 [Carya illinoinensis] >KAG6639675.1 hypothe... [more]
PIN05562.13.99e-1151.52hypothetical protein CDL12_21899 [Handroanthus impetiginosus][more]
Match NameE-valueIdentityDescription
A0A2G9GK331.93e-1151.52Uncharacterized protein OS=Handroanthus impetiginosus OX=429701 GN=CDL12_21899 P... [more]
A0A7N2LSL04.29e-1146.34Uncharacterized protein OS=Quercus lobata OX=97700 PE=4 SV=1[more]
A0A6A1WD781.32e-1048.53Uncharacterized protein OS=Morella rubra OX=262757 GN=CJ030_MR2G006876 PE=4 SV=1[more]
A0A0A0LV051.75e-1051.47Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G071850 PE=4 SV=1[more]
A0A1R3H3Y01.92e-1050.75Uncharacterized protein OS=Corchorus olitorius OX=93759 GN=COLO4_31599 PE=4 SV=1[more]
Match NameE-valueIdentityDescription
AT4G10270.11.1e-0661.76Wound-responsive family protein [more]
AT4G05070.14.7e-0564.52Wound-responsive family protein [more]
AT4G10265.16.1e-0585.71Wound-responsive family protein [more]
InterPro
Analysis Name: InterPro Annotations of Bitter gourd (Dali-11) v1
Date Performed: 2021-10-25
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR022251Protein of unknown function wound-inducedPFAMPF12609DUF3774coord: 18..68
e-value: 9.2E-12
score: 45.8
IPR022251Protein of unknown function wound-inducedPANTHERPTHR33090DUF3774 DOMAIN PROTEIN-RELATEDcoord: 1..69
NoneNo IPR availablePANTHERPTHR33090:SF41WOUND-RESPONSIVE FAMILY PROTEINcoord: 1..69

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
MC03g0835.1MC03g0835.1mRNA