MC03g0703 (gene) Bitter gourd (Dali-11) v1

Overview


Name	MC03g0703
Type	gene
Organism	Momordica charantia cv. Dali-11 (Bitter gourd (Dali-11) v1)
Description	Coatomer subunit zeta
Location	MC03: 13892874 .. 13896818 (+)
RNA-Seq Expression	MC03g0703
Synteny	MC03g0703

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: utr5CDSpolypeptideutr3

Hold the cursor over a type above to highlight its positions in the sequence below.

ATTAAAGTCTTATCCTTGTTGTACAATATCATGTACAACATACACTAAAACTTCAAATGGACCATGGCCATAACAAAGTGGTCGGAAACATAAATATTTAAAGAAACGGGTAAAATTTTAATTATGGAAAAGTGAGGGCCTCGTTTTGTATATTAGTTTACTTCGGGGACCTGCCGGAGTCGCCAAAGTATTTGAACAGAGTCCCTTTTTTCGGTTTTCGTCCTGTGGCTTCGTCTGTAACGCGAGAGCGATCCGACGGCGTCCGAATTCACGAAGAGTAATTTCCCGGGAAAATTTTCACAAACCACATGGTCAGTTTCTTTCTTCATCTTGAACTAATTGTGTCTTTGTTTCATACTTCTGTTACTTTTTCGCCTGATTCTCTCTCCGTCAAGTTCAGCTTTTAGAAATGTCTTGTAGTAACTACCTGTGGGTTTTCCGGGACGAAGTTTGATCCTCGGATTGTGAAGTTTTATTCTAGTTACACAGTTATGTTCGACGATTTTGGACGTCGGATTTGTTGATGTTTTAGTAGATCTGGCTTCTGAGCTCACTTTAATAATGTGTTCGTAGGCACAGATCGATCTATGAACTCGATAATTTGATGCGTATTATTGTCTTTGCTTAGATAGATCTTGCTAATTTCTTTGAAAGATTTGAATTGTCTGCGCATTACTTCCTTCGGGTCGAGTTTGTGCCTTTTCTATGAATCTAGCCGATGACTGCAAGATTTTTACATTTCACCTGGAAAAATCCTAATTCTAAGTTAATCTCACTCTATGAAACTCAATTTCTCGGTTCATTTTATTTCGTTTATAGATTTTAGTGACAATAGTTGAAGCAACTGGGAGGATCTTGATTAGTATAGCTGTATGCTCTATAAGAATGTTTGTGAAGCTCATTCAGAGGGCTTCGCAATCTCAAATTCTGTTGTATTGTAGCTTAATTTATAGTTTATGAATGTTGCTTGGTGAATTAGGTCTTTTGGCCCTCAGACCAGTTAGCCGTGACAATTATTTCGGGGGAAAAAACATCTGGTGCTCAGGAAAAGGCTATTCCCCCAATTCTAACCCTTTTGCTTTACTATATACAGGAATCTTGCCCTTCCATTAAAAACATTCTTCTTTTGGATTCCGAAGGGAAACGTGTAGCTGTCAAGTATTATTCAGATGACTGGCCTACAAATAGTGCAAAGGAAGCTTTTGAGAAAGCCGTTTTCACCAAAACTCAGAAGACGAATGCTCGAACAGAGGGTTGTTACTTTTTCATGTATCAGTCTTTAACTGTTTTTTCTTTTAGTCTTTGTCCTTAATCATATCAGCTCCTCCTATTTAATTCAATTTCAATGTCATTTTAATCACAATAAAGTAGCTTCTGAATCTTTTAGTAAAATTATTTGATTTGGTTTATCCATAATCATTGTTTTGTATCATAAGAAATAAGAATAAGAATTATTTTTTCAATCACATTATCGTGACTATTAGTAGCACGGGTTAGTCATTCGACTTTGAAAGTCTATTTTGTTCTCAGCATTCGTATCCCAAAAAAAAAAAAAAAAAAAAAAAAATCTCCACATGCTGTTAGACCATCTACCACTACCAGTCTAGTAACATTTTGTAGAATACAATGCTTTTTATGCCTTATATGATTGGAAAATTCCTTTTCTACATGCTAACTTGGTATCTACTGTTCTTATACAGCGGAGATAGCAATGTTTGAAAACAATATAGTGGTTTACAAGTTTGTTCAAGACCTTCATTTTTTTGTTACGGGTGGAGAAGATGAAAATGAGCTCATTTTAGCATCCGTTCTTCAGGGATTTTTTGATGCTGTGGGCATTCTTCTTAGGTCTTGAGACTATTTTCATTTTTTGGATCCTTATGTGCTGGCCCGTACTACTGTTCTTGATCATAGTGTTCTTAGATATTTATCTTTGTTTCTTCTATTCCAGGGGTAATGTAGAAAAGAAGGAGGCACTTGAGAACTTGGACCTCATTTTACTATGTCTCGATGAAATTATTGACGGAGGGTATGTCTCATTAGCTTATTTCCTCATACCTTCATTTGCTGCATTTCAATTGTGTTACCCGTTCTTCTATTTCCTTCTATTGATCAATCTTCTGTACTTTGATTGTGCCATTTTTACATTTACTACCCTCTTTAAGTTCATGGCCATGCCTATTGCAAACATGAAAATGGAAGCATGGGTTGTTAGATGATTATATCGCAATAATCTATGGTAGCAGTACTTAAATGTCATTACTCATCAGGAAAGAATAGTTTCATGAATACGTGGAAAAAAATTTGTAGATGAATGAGGAATATGCGTTCATTGTAGTTGCGAAACTGCTATAAAATAGTCTAAGAGATTGTCACCTGTTGAAGTACTGGTTTATCTTGACATGGTGGTTTGTTGCTGGATAAGAGATTTGGCCGTCTCACCTCTCCATTTCGATTATGTCACTAGTGAATTGTTTACACAAGTTTATAGAAAAACTTCTGGTAATTATGATGATAATGGTAACCATCATGGGATGGCTCAAGTGGTCAACGAGGGTCAATGTAAATAGCAAAGGACTTAGAAGGAATGAGTTCAAACCATGGTGGCCACCTACCTACGATTTAATATCCTACGAGTTTCCTTATCAACCAAATGTAGTAGGGTCAGGTGGTTGGCCCGTGAATAGTCGAGGTGCTCGCAAGCTGGCCCAAACACACGGATATCAAAAAAAAAATTATGATGATAATGGTAGATGACATTATATAACGAAACATAAATCCCAACAAACAAAATCTCTGGTTTACTTATTTATTTTTTTTGGTTCAACCATATGTAGGGACGAGGATTCAAATCTCGAGGATATATGTTTAACCAATTGAGTGATATTGAGGTTGACGTATATGTTTACTTCTTTAAAATTTTTGTCTGGTTGCTAGAGTTTAGGTGGCTCAACTTTAGGTGGCTCAACTTGATGGACCCTCTCTTTGCCAACGCCAACCACAAAAAAATAAGTGAACACATAACCGGATAATAGAGGCCTTGCGTGGATTAACTCAAACGGATAATTTTACCAATGGTTGTTTTATTCATGAGATCAGAAAGTTACCAATTGCTTTTTGTAATTATTTAAAACTCCTCTTCACATGTGTACTGGTAACCAAATTCTAATGGAAACTACAAACAATTTAATTTTACTGATTTATTCCTCAAGGTTATTCTAGAATAGATTCCTTTTCAACTGAATATCCAAGTGGTTTGCCGTTTTCACTGCCCCTTGTGAAGGGAATTATCACTTTGCTTTTTTAAAATTGCAATGCAGTAGTATTATACTTTCGTTTTACAAATCATGTTGGCATTATGGAACCACGTTAATTGCAGAAGAAAGTGGTTACTCTTTTCTATTAGTGTTTTAATGGTTTTTTTTTTCTTTCGTGCAGCATTATTCTCGAGACAGATGCAAATGTCATTGCAGGGAAGGTCGCAAGTCATAGCATTGACACTGGTGCTCCTTTGTCTGAACAGGTACACAATAAAATAATTCAGATTCTTTTTCCTTTCACTTTTCTCCCTTATATTTTCCAGCATCTTTAAAAGTTGTTTCTCGCTCCTGCTCTTGCAGACAATAAGTCAGGCATTGGCCACAGCTCGCGAACATCTAGCAAGATCTCTTCTTAAATGATATGTTTGGCTGATAAAAGTGAGTGAGTCCTACCCGGAAAAGGGGGAAAAGAATCAGGTTGAGATAACCTGGTGTTTTGATAAAAGATGATTAATGTTGAGTTATCAATAGCCTCATGTGTTGTATATTCCGCTCATATTCTGCTGTGTGCCTTCGGCTAAACCTGATTTTTGGATTTGAGCAGATGTGGTGCATTGTGAGATTATGTTAAATGTGGAGTTACCAGATTTTCTGAATCAATGTCTTAATTTTTTTTTTCTTGGCC

mRNA sequence

ATTAAAGTCTTATCCTTGTTGTACAATATCATGTACAACATACACTAAAACTTCAAATGGACCATGGCCATAACAAAGTGGTCGGAAACATAAATATTTAAAGAAACGGGTAAAATTTTAATTATGGAAAAGTGAGGGCCTCGTTTTGTATATTAGTTTACTTCGGGGACCTGCCGGAGTCGCCAAAGTATTTGAACAGAGTCCCTTTTTTCGGTTTTCGTCCTGTGGCTTCGTCTGTAACGCGAGAGCGATCCGACGGCGTCCGAATTCACGAAGAGTAATTTCCCGGGAAAATTTTCACAAACCACATGGAATCTTGCCCTTCCATTAAAAACATTCTTCTTTTGGATTCCGAAGGGAAACGTGTAGCTGTCAAGTATTATTCAGATGACTGGCCTACAAATAGTGCAAAGGAAGCTTTTGAGAAAGCCGTTTTCACCAAAACTCAGAAGACGAATGCTCGAACAGAGGCGGAGATAGCAATGTTTGAAAACAATATAGTGGTTTACAAGTTTGTTCAAGACCTTCATTTTTTTGTTACGGGTGGAGAAGATGAAAATGAGCTCATTTTAGCATCCGTTCTTCAGGGATTTTTTGATGCTGTGGGCATTCTTCTTAGGGGTAATGTAGAAAAGAAGGAGGCACTTGAGAACTTGGACCTCATTTTACTATGTCTCGATGAAATTATTGACGGAGGCATTATTCTCGAGACAGATGCAAATGTCATTGCAGGGAAGGTCGCAAGTCATAGCATTGACACTGGTGCTCCTTTGTCTGAACAGACAATAAGTCAGGCATTGGCCACAGCTCGCGAACATCTAGCAAGATCTCTTCTTAAATGATATGTTTGGCTGATAAAAGTGAGTGAGTCCTACCCGGAAAAGGGGGAAAAGAATCAGGTTGAGATAACCTGGTGTTTTGATAAAAGATGATTAATGTTGAGTTATCAATAGCCTCATGTGTTGTATATTCCGCTCATATTCTGCTGTGTGCCTTCGGCTAAACCTGATTTTTGGATTTGAGCAGATGTGGTGCATTGTGAGATTATGTTAAATGTGGAGTTACCAGATTTTCTGAATCAATGTCTTAATTTTTTTTTTCTTGGCC

Coding sequence (CDS)

ATGGAATCTTGCCCTTCCATTAAAAACATTCTTCTTTTGGATTCCGAAGGGAAACGTGTAGCTGTCAAGTATTATTCAGATGACTGGCCTACAAATAGTGCAAAGGAAGCTTTTGAGAAAGCCGTTTTCACCAAAACTCAGAAGACGAATGCTCGAACAGAGGCGGAGATAGCAATGTTTGAAAACAATATAGTGGTTTACAAGTTTGTTCAAGACCTTCATTTTTTTGTTACGGGTGGAGAAGATGAAAATGAGCTCATTTTAGCATCCGTTCTTCAGGGATTTTTTGATGCTGTGGGCATTCTTCTTAGGGGTAATGTAGAAAAGAAGGAGGCACTTGAGAACTTGGACCTCATTTTACTATGTCTCGATGAAATTATTGACGGAGGCATTATTCTCGAGACAGATGCAAATGTCATTGCAGGGAAGGTCGCAAGTCATAGCATTGACACTGGTGCTCCTTTGTCTGAACAGACAATAAGTCAGGCATTGGCCACAGCTCGCGAACATCTAGCAAGATCTCTTCTTAAATGA

Protein sequence

MESCPSIKNILLLDSEGKRVAVKYYSDDWPTNSAKEAFEKAVFTKTQKTNARTEAEIAMFENNIVVYKFVQDLHFFVTGGEDENELILASVLQGFFDAVGILLRGNVEKKEALENLDLILLCLDEIIDGGIILETDANVIAGKVASHSIDTGAPLSEQTISQALATAREHLARSLLK

Homology

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BLAST of MC03g0703 vs. ExPASy Swiss-Prot
Match: Q940S5 (Coatomer subunit zeta-1 OS=Arabidopsis thaliana OX=3702 GN=At1g60970 PE=2 SV=1)

HSP 1 Score: 282.3 bits (721), Expect = 3.7e-75
Identity = 144/177 (81.36%), Postives = 157/177 (88.70%), Query Frame = 0


Query: 1   MESCPSIKNILLLDSEGKRVAVKYYSDDWPTNSAKEAFEKAVFTKTQKTNARTEAEIAMF 60
           ME  P +KNILLLDSEGKRVAVKYYSDDWPTNSA+EAFEK+VFTKTQKTNARTE E+   
Sbjct: 1   MELPPKVKNILLLDSEGKRVAVKYYSDDWPTNSAQEAFEKSVFTKTQKTNARTEVEVTAL 60

Query: 61  ENNIVVYKFVQDLHFFVTGGEDENELILASVLQGFFDAVGILLRGNVEKKEALENLDLIL 120
           ENNIVVYKFVQDLHFFVTGGE+ENELILASVL+G FDAV +LLR NV+K+EAL+NLDLI 
Sbjct: 61  ENNIVVYKFVQDLHFFVTGGEEENELILASVLEGLFDAVTLLLRSNVDKREALDNLDLIF 120

Query: 121 LCLDEIIDGGIILETDANVIAGKVASHSIDTGAPLSEQTISQALATAREHLARSLLK 178
           L  DEIIDGGI+LETDANVIAGK   +S D  APLSEQTISQALATAREHL RSL+K
Sbjct: 121 LSFDEIIDGGIVLETDANVIAGKAGINSTDPNAPLSEQTISQALATAREHLTRSLMK 177

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BLAST of MC03g0703 vs. ExPASy Swiss-Prot
Match: Q6Z844 (Coatomer subunit zeta-2 OS=Oryza sativa subsp. japonica OX=39947 GN=COPZ2 PE=2 SV=1)

HSP 1 Score: 282.0 bits (720), Expect = 4.8e-75
Identity = 141/176 (80.11%), Postives = 163/176 (92.61%), Query Frame = 0


Query: 2   ESCPSIKNILLLDSEGKRVAVKYYSDDWPTNSAKEAFEKAVFTKTQKTNARTEAEIAMFE 61
           ESCPS+KNILLLDSEGKRVAVKY+SDDW +N++K AFEK+VFTKT KTNAR+EAEI +F+
Sbjct: 7   ESCPSVKNILLLDSEGKRVAVKYFSDDWSSNASKLAFEKSVFTKTLKTNARSEAEITLFD 66

Query: 62  NNIVVYKFVQDLHFFVTGGEDENELILASVLQGFFDAVGILLRGNVEKKEALENLDLILL 121
             IVVYKFVQDLHFFVT G+DENELI+A+VLQGF D+VG+LLRG+VEK+ ALENLDLILL
Sbjct: 67  GYIVVYKFVQDLHFFVTAGDDENELIIANVLQGFSDSVGLLLRGDVEKRTALENLDLILL 126

Query: 122 CLDEIIDGGIILETDANVIAGKVASHSIDTGAPLSEQTISQALATAREHLARSLLK 178
           C+DEI+DGGIILETDAN IAGKVA++++D  AP SEQTISQALATAREHLARSLLK
Sbjct: 127 CIDEIVDGGIILETDANTIAGKVATNAVDGSAPFSEQTISQALATAREHLARSLLK 182

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BLAST of MC03g0703 vs. ExPASy Swiss-Prot
Match: Q84LG4 (Coatomer subunit zeta-2 OS=Arabidopsis thaliana OX=3702 GN=At3g09800 PE=2 SV=1)

HSP 1 Score: 274.2 bits (700), Expect = 1.0e-72
Identity = 137/175 (78.29%), Postives = 155/175 (88.57%), Query Frame = 0


Query: 2   ESCPSIKNILLLDSEGKRVAVKYYSDDWPTNSAKEAFEKAVFTKTQKTNARTEAEIAMFE 61
           +SCP +KNILLLDSEGKRVAVKYYSDDWPTN+AK +FEK VF+KT KTNARTEAEI + +
Sbjct: 4   DSCPLVKNILLLDSEGKRVAVKYYSDDWPTNAAKLSFEKYVFSKTSKTNARTEAEITLLD 63

Query: 62  NNIVVYKFVQDLHFFVTGGEDENELILASVLQGFFDAVGILLRGNVEKKEALENLDLILL 121
           +NI+VYKF QDLHFFVTGGE+ENELILASVLQGFFDAV +LLR NVEK EALENLDLI L
Sbjct: 64  SNIIVYKFAQDLHFFVTGGENENELILASVLQGFFDAVALLLRSNVEKMEALENLDLIFL 123

Query: 122 CLDEIIDGGIILETDANVIAGKVASHSIDTGAPLSEQTISQALATAREHLARSLL 177
           CLDE++D G++LETD NVIAGKVA  S +    LSEQT++QALATAREHLARSLL
Sbjct: 124 CLDEMVDQGVVLETDPNVIAGKVAMQSTEASGSLSEQTLTQALATAREHLARSLL 178

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BLAST of MC03g0703 vs. ExPASy Swiss-Prot
Match: Q8H1F4 (Coatomer subunit zeta-3 OS=Arabidopsis thaliana OX=3702 GN=At4g08520 PE=2 SV=1)

HSP 1 Score: 272.3 bits (695), Expect = 3.8e-72
Identity = 137/175 (78.29%), Postives = 155/175 (88.57%), Query Frame = 0


Query: 2   ESCPSIKNILLLDSEGKRVAVKYYSDDWPTNSAKEAFEKAVFTKTQKTNARTEAEIAMFE 61
           +SCP +KNILLLDSEGKRVAVKYYSDDW TN++K AFEK VF+KT KTNARTEAEI + E
Sbjct: 6   DSCPLVKNILLLDSEGKRVAVKYYSDDWATNASKLAFEKYVFSKTSKTNARTEAEITLLE 65

Query: 62  NNIVVYKFVQDLHFFVTGGEDENELILASVLQGFFDAVGILLRGNVEKKEALENLDLILL 121
           +NIVVYKF QDLHFFVTGGE+ENEL+L+SVLQGFFDAV +LLR NVEK EALENLDLI L
Sbjct: 66  SNIVVYKFAQDLHFFVTGGENENELVLSSVLQGFFDAVALLLRNNVEKMEALENLDLIFL 125

Query: 122 CLDEIIDGGIILETDANVIAGKVASHSIDTGAPLSEQTISQALATAREHLARSLL 177
           CLDE++D G++LETDANVIAGKVA  S +    LSEQT++QALATAREHLARSLL
Sbjct: 126 CLDEMVDQGMVLETDANVIAGKVAMQSAEASGSLSEQTLTQALATAREHLARSLL 180

[Close]

BLAST of MC03g0703 vs. ExPASy Swiss-Prot
Match: Q9MAX5 (Coatomer subunit zeta-1 OS=Oryza sativa subsp. japonica OX=39947 GN=COPZ1 PE=2 SV=1)

HSP 1 Score: 265.0 bits (676), Expect = 6.1e-70
Identity = 134/176 (76.14%), Postives = 153/176 (86.93%), Query Frame = 0


Query: 1   MESCPSIKNILLLDSEGKRVAVKYYSDDWPTNSAKEAFEKAVFTKTQKTNARTEAEIAMF 60
           MESCPS+KNILLLDSEGKRVAVKYY+DDWPT SAK AFEK+VF KTQK  A  EAEI MF
Sbjct: 1   MESCPSVKNILLLDSEGKRVAVKYYTDDWPTLSAKLAFEKSVFVKTQKATAGAEAEIVMF 60

Query: 61  ENNIVVYKFVQDLHFFVTGGEDENELILASVLQGFFDAVGILLRGNVEKKEALENLDLIL 120
           + +IVVYKF+QDLHFFVTGGE+ENELILASVLQGF DAV I+LR NV+K+ ALENLDLIL
Sbjct: 61  DGHIVVYKFIQDLHFFVTGGEEENELILASVLQGFTDAVDIILRNNVDKRTALENLDLIL 120

Query: 121 LCLDEIIDGGIILETDANVIAGKVASHSIDTGAPLSEQTISQALATAREHLARSLL 177
           LCLDEI+DGGI+LET+ +VIA KV++H I+    L+EQTI QAL TAREHL +SLL
Sbjct: 121 LCLDEIVDGGIVLETEGSVIAEKVSAHGIEGATSLAEQTIVQALTTAREHLTKSLL 176

[Close]

BLAST of MC03g0703 vs. NCBI nr
Match: XP_022139792.1 (coatomer subunit zeta-1-like [Momordica charantia])

HSP 1 Score: 339 bits (870), Expect = 2.77e-117
Identity = 177/177 (100.00%), Postives = 177/177 (100.00%), Query Frame = 0


Query: 1   MESCPSIKNILLLDSEGKRVAVKYYSDDWPTNSAKEAFEKAVFTKTQKTNARTEAEIAMF 60
           MESCPSIKNILLLDSEGKRVAVKYYSDDWPTNSAKEAFEKAVFTKTQKTNARTEAEIAMF
Sbjct: 1   MESCPSIKNILLLDSEGKRVAVKYYSDDWPTNSAKEAFEKAVFTKTQKTNARTEAEIAMF 60

Query: 61  ENNIVVYKFVQDLHFFVTGGEDENELILASVLQGFFDAVGILLRGNVEKKEALENLDLIL 120
           ENNIVVYKFVQDLHFFVTGGEDENELILASVLQGFFDAVGILLRGNVEKKEALENLDLIL
Sbjct: 61  ENNIVVYKFVQDLHFFVTGGEDENELILASVLQGFFDAVGILLRGNVEKKEALENLDLIL 120

Query: 121 LCLDEIIDGGIILETDANVIAGKVASHSIDTGAPLSEQTISQALATAREHLARSLLK 177
           LCLDEIIDGGIILETDANVIAGKVASHSIDTGAPLSEQTISQALATAREHLARSLLK
Sbjct: 121 LCLDEIIDGGIILETDANVIAGKVASHSIDTGAPLSEQTISQALATAREHLARSLLK 177

[Close]

BLAST of MC03g0703 vs. NCBI nr
Match: XP_023542943.1 (coatomer subunit zeta-1-like isoform X2 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 337 bits (864), Expect = 2.28e-116
Identity = 175/177 (98.87%), Postives = 177/177 (100.00%), Query Frame = 0


Query: 1   MESCPSIKNILLLDSEGKRVAVKYYSDDWPTNSAKEAFEKAVFTKTQKTNARTEAEIAMF 60
           MESCPSIKNILLLDSEGKRVAVKYYSDDWPTNSAKEAFEKAVFTKTQKTNARTEAEIAMF
Sbjct: 1   MESCPSIKNILLLDSEGKRVAVKYYSDDWPTNSAKEAFEKAVFTKTQKTNARTEAEIAMF 60

Query: 61  ENNIVVYKFVQDLHFFVTGGEDENELILASVLQGFFDAVGILLRGNVEKKEALENLDLIL 120
           ENNIVVYKFVQDLHFFVTGGEDENELILASVLQGFFDAVG+LLRGNVEKKEALENLDLIL
Sbjct: 61  ENNIVVYKFVQDLHFFVTGGEDENELILASVLQGFFDAVGLLLRGNVEKKEALENLDLIL 120

Query: 121 LCLDEIIDGGIILETDANVIAGKVASHSIDTGAPLSEQTISQALATAREHLARSLLK 177
           LCLDEIIDGGIILETDANVIAGKVASHSID+GAPLSEQTISQALATAREHLARSLLK
Sbjct: 121 LCLDEIIDGGIILETDANVIAGKVASHSIDSGAPLSEQTISQALATAREHLARSLLK 177

[Close]

BLAST of MC03g0703 vs. NCBI nr
Match: XP_022954697.1 (coatomer subunit zeta-2-like isoform X2 [Cucurbita moschata] >XP_022994906.1 coatomer subunit zeta-2-like isoform X2 [Cucurbita maxima] >KAG6573351.1 Coatomer subunit zeta-2, partial [Cucurbita argyrosperma subsp. sororia] >KAG7012515.1 Coatomer subunit zeta-2 [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 335 bits (860), Expect = 9.28e-116
Identity = 174/177 (98.31%), Postives = 176/177 (99.44%), Query Frame = 0


Query: 1   MESCPSIKNILLLDSEGKRVAVKYYSDDWPTNSAKEAFEKAVFTKTQKTNARTEAEIAMF 60
           MESCPSIKNILLLDSEGKRVAVKYYSDDWPTNS KEAFEKAVFTKTQKTNARTEAEIAMF
Sbjct: 1   MESCPSIKNILLLDSEGKRVAVKYYSDDWPTNSTKEAFEKAVFTKTQKTNARTEAEIAMF 60

Query: 61  ENNIVVYKFVQDLHFFVTGGEDENELILASVLQGFFDAVGILLRGNVEKKEALENLDLIL 120
           ENNIVVYKFVQDLHFFVTGGEDENELILASVLQGFFDAVG+LLRGNVEKKEALENLDLIL
Sbjct: 61  ENNIVVYKFVQDLHFFVTGGEDENELILASVLQGFFDAVGLLLRGNVEKKEALENLDLIL 120

Query: 121 LCLDEIIDGGIILETDANVIAGKVASHSIDTGAPLSEQTISQALATAREHLARSLLK 177
           LCLDEIIDGGIILETDANVIAGKVASHSID+GAPLSEQTISQALATAREHLARSLLK
Sbjct: 121 LCLDEIIDGGIILETDANVIAGKVASHSIDSGAPLSEQTISQALATAREHLARSLLK 177

[Close]

BLAST of MC03g0703 vs. NCBI nr
Match: XP_023542942.1 (coatomer subunit zeta-2-like isoform X1 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 335 bits (859), Expect = 1.37e-115
Identity = 174/176 (98.86%), Postives = 176/176 (100.00%), Query Frame = 0


Query: 2   ESCPSIKNILLLDSEGKRVAVKYYSDDWPTNSAKEAFEKAVFTKTQKTNARTEAEIAMFE 61
           ESCPSIKNILLLDSEGKRVAVKYYSDDWPTNSAKEAFEKAVFTKTQKTNARTEAEIAMFE
Sbjct: 3   ESCPSIKNILLLDSEGKRVAVKYYSDDWPTNSAKEAFEKAVFTKTQKTNARTEAEIAMFE 62

Query: 62  NNIVVYKFVQDLHFFVTGGEDENELILASVLQGFFDAVGILLRGNVEKKEALENLDLILL 121
           NNIVVYKFVQDLHFFVTGGEDENELILASVLQGFFDAVG+LLRGNVEKKEALENLDLILL
Sbjct: 63  NNIVVYKFVQDLHFFVTGGEDENELILASVLQGFFDAVGLLLRGNVEKKEALENLDLILL 122

Query: 122 CLDEIIDGGIILETDANVIAGKVASHSIDTGAPLSEQTISQALATAREHLARSLLK 177
           CLDEIIDGGIILETDANVIAGKVASHSID+GAPLSEQTISQALATAREHLARSLLK
Sbjct: 123 CLDEIIDGGIILETDANVIAGKVASHSIDSGAPLSEQTISQALATAREHLARSLLK 178

[Close]

BLAST of MC03g0703 vs. NCBI nr
Match: XP_038895636.1 (coatomer subunit zeta-1-like isoform X2 [Benincasa hispida])

HSP 1 Score: 334 bits (856), Expect = 3.78e-115
Identity = 174/177 (98.31%), Postives = 175/177 (98.87%), Query Frame = 0


Query: 1   MESCPSIKNILLLDSEGKRVAVKYYSDDWPTNSAKEAFEKAVFTKTQKTNARTEAEIAMF 60
           MESCPSIKNILLLDSEGKRVAVKYYSDDWPTNSAKEAFEKAVF KTQKTNARTEAEIAMF
Sbjct: 1   MESCPSIKNILLLDSEGKRVAVKYYSDDWPTNSAKEAFEKAVFIKTQKTNARTEAEIAMF 60

Query: 61  ENNIVVYKFVQDLHFFVTGGEDENELILASVLQGFFDAVGILLRGNVEKKEALENLDLIL 120
           ENNIVVYKF QDLHFFVTGGEDENELILASVLQGFFDAVGILLRGNVEKKEALENLDLIL
Sbjct: 61  ENNIVVYKFAQDLHFFVTGGEDENELILASVLQGFFDAVGILLRGNVEKKEALENLDLIL 120

Query: 121 LCLDEIIDGGIILETDANVIAGKVASHSIDTGAPLSEQTISQALATAREHLARSLLK 177
           LCLDEIIDGGIILETDANVIAGKVASHSID+GAPLSEQTISQALATAREHLARSLLK
Sbjct: 121 LCLDEIIDGGIILETDANVIAGKVASHSIDSGAPLSEQTISQALATAREHLARSLLK 177

[Close]

BLAST of MC03g0703 vs. ExPASy TrEMBL
Match: A0A6J1CEY0 (Coatomer subunit zeta OS=Momordica charantia OX=3673 GN=LOC111010622 PE=3 SV=1)

HSP 1 Score: 339 bits (870), Expect = 1.34e-117
Identity = 177/177 (100.00%), Postives = 177/177 (100.00%), Query Frame = 0


Query: 1   MESCPSIKNILLLDSEGKRVAVKYYSDDWPTNSAKEAFEKAVFTKTQKTNARTEAEIAMF 60
           MESCPSIKNILLLDSEGKRVAVKYYSDDWPTNSAKEAFEKAVFTKTQKTNARTEAEIAMF
Sbjct: 1   MESCPSIKNILLLDSEGKRVAVKYYSDDWPTNSAKEAFEKAVFTKTQKTNARTEAEIAMF 60

Query: 61  ENNIVVYKFVQDLHFFVTGGEDENELILASVLQGFFDAVGILLRGNVEKKEALENLDLIL 120
           ENNIVVYKFVQDLHFFVTGGEDENELILASVLQGFFDAVGILLRGNVEKKEALENLDLIL
Sbjct: 61  ENNIVVYKFVQDLHFFVTGGEDENELILASVLQGFFDAVGILLRGNVEKKEALENLDLIL 120

Query: 121 LCLDEIIDGGIILETDANVIAGKVASHSIDTGAPLSEQTISQALATAREHLARSLLK 177
           LCLDEIIDGGIILETDANVIAGKVASHSIDTGAPLSEQTISQALATAREHLARSLLK
Sbjct: 121 LCLDEIIDGGIILETDANVIAGKVASHSIDTGAPLSEQTISQALATAREHLARSLLK 177

[Close]

BLAST of MC03g0703 vs. ExPASy TrEMBL
Match: A0A6J1K0K6 (Coatomer subunit zeta OS=Cucurbita maxima OX=3661 GN=LOC111490490 PE=3 SV=1)

HSP 1 Score: 335 bits (860), Expect = 4.49e-116
Identity = 174/177 (98.31%), Postives = 176/177 (99.44%), Query Frame = 0


Query: 1   MESCPSIKNILLLDSEGKRVAVKYYSDDWPTNSAKEAFEKAVFTKTQKTNARTEAEIAMF 60
           MESCPSIKNILLLDSEGKRVAVKYYSDDWPTNS KEAFEKAVFTKTQKTNARTEAEIAMF
Sbjct: 1   MESCPSIKNILLLDSEGKRVAVKYYSDDWPTNSTKEAFEKAVFTKTQKTNARTEAEIAMF 60

Query: 61  ENNIVVYKFVQDLHFFVTGGEDENELILASVLQGFFDAVGILLRGNVEKKEALENLDLIL 120
           ENNIVVYKFVQDLHFFVTGGEDENELILASVLQGFFDAVG+LLRGNVEKKEALENLDLIL
Sbjct: 61  ENNIVVYKFVQDLHFFVTGGEDENELILASVLQGFFDAVGLLLRGNVEKKEALENLDLIL 120

Query: 121 LCLDEIIDGGIILETDANVIAGKVASHSIDTGAPLSEQTISQALATAREHLARSLLK 177
           LCLDEIIDGGIILETDANVIAGKVASHSID+GAPLSEQTISQALATAREHLARSLLK
Sbjct: 121 LCLDEIIDGGIILETDANVIAGKVASHSIDSGAPLSEQTISQALATAREHLARSLLK 177

[Close]

BLAST of MC03g0703 vs. ExPASy TrEMBL
Match: A0A6J1GRN0 (Coatomer subunit zeta OS=Cucurbita moschata OX=3662 GN=LOC111456877 PE=3 SV=1)

HSP 1 Score: 335 bits (860), Expect = 4.49e-116
Identity = 174/177 (98.31%), Postives = 176/177 (99.44%), Query Frame = 0


Query: 1   MESCPSIKNILLLDSEGKRVAVKYYSDDWPTNSAKEAFEKAVFTKTQKTNARTEAEIAMF 60
           MESCPSIKNILLLDSEGKRVAVKYYSDDWPTNS KEAFEKAVFTKTQKTNARTEAEIAMF
Sbjct: 1   MESCPSIKNILLLDSEGKRVAVKYYSDDWPTNSTKEAFEKAVFTKTQKTNARTEAEIAMF 60

Query: 61  ENNIVVYKFVQDLHFFVTGGEDENELILASVLQGFFDAVGILLRGNVEKKEALENLDLIL 120
           ENNIVVYKFVQDLHFFVTGGEDENELILASVLQGFFDAVG+LLRGNVEKKEALENLDLIL
Sbjct: 61  ENNIVVYKFVQDLHFFVTGGEDENELILASVLQGFFDAVGLLLRGNVEKKEALENLDLIL 120

Query: 121 LCLDEIIDGGIILETDANVIAGKVASHSIDTGAPLSEQTISQALATAREHLARSLLK 177
           LCLDEIIDGGIILETDANVIAGKVASHSID+GAPLSEQTISQALATAREHLARSLLK
Sbjct: 121 LCLDEIIDGGIILETDANVIAGKVASHSIDSGAPLSEQTISQALATAREHLARSLLK 177

[Close]

BLAST of MC03g0703 vs. ExPASy TrEMBL
Match: A0A6J1K2M3 (Coatomer subunit zeta OS=Cucurbita maxima OX=3661 GN=LOC111490490 PE=3 SV=1)

HSP 1 Score: 333 bits (855), Expect = 2.69e-115
Identity = 173/176 (98.30%), Postives = 175/176 (99.43%), Query Frame = 0


Query: 2   ESCPSIKNILLLDSEGKRVAVKYYSDDWPTNSAKEAFEKAVFTKTQKTNARTEAEIAMFE 61
           ESCPSIKNILLLDSEGKRVAVKYYSDDWPTNS KEAFEKAVFTKTQKTNARTEAEIAMFE
Sbjct: 3   ESCPSIKNILLLDSEGKRVAVKYYSDDWPTNSTKEAFEKAVFTKTQKTNARTEAEIAMFE 62

Query: 62  NNIVVYKFVQDLHFFVTGGEDENELILASVLQGFFDAVGILLRGNVEKKEALENLDLILL 121
           NNIVVYKFVQDLHFFVTGGEDENELILASVLQGFFDAVG+LLRGNVEKKEALENLDLILL
Sbjct: 63  NNIVVYKFVQDLHFFVTGGEDENELILASVLQGFFDAVGLLLRGNVEKKEALENLDLILL 122

Query: 122 CLDEIIDGGIILETDANVIAGKVASHSIDTGAPLSEQTISQALATAREHLARSLLK 177
           CLDEIIDGGIILETDANVIAGKVASHSID+GAPLSEQTISQALATAREHLARSLLK
Sbjct: 123 CLDEIIDGGIILETDANVIAGKVASHSIDSGAPLSEQTISQALATAREHLARSLLK 178

[Close]

BLAST of MC03g0703 vs. ExPASy TrEMBL
Match: A0A6J1GRL4 (Coatomer subunit zeta OS=Cucurbita moschata OX=3662 GN=LOC111456877 PE=3 SV=1)

HSP 1 Score: 333 bits (855), Expect = 2.69e-115
Identity = 173/176 (98.30%), Postives = 175/176 (99.43%), Query Frame = 0


Query: 2   ESCPSIKNILLLDSEGKRVAVKYYSDDWPTNSAKEAFEKAVFTKTQKTNARTEAEIAMFE 61
           ESCPSIKNILLLDSEGKRVAVKYYSDDWPTNS KEAFEKAVFTKTQKTNARTEAEIAMFE
Sbjct: 3   ESCPSIKNILLLDSEGKRVAVKYYSDDWPTNSTKEAFEKAVFTKTQKTNARTEAEIAMFE 62

Query: 62  NNIVVYKFVQDLHFFVTGGEDENELILASVLQGFFDAVGILLRGNVEKKEALENLDLILL 121
           NNIVVYKFVQDLHFFVTGGEDENELILASVLQGFFDAVG+LLRGNVEKKEALENLDLILL
Sbjct: 63  NNIVVYKFVQDLHFFVTGGEDENELILASVLQGFFDAVGLLLRGNVEKKEALENLDLILL 122

Query: 122 CLDEIIDGGIILETDANVIAGKVASHSIDTGAPLSEQTISQALATAREHLARSLLK 177
           CLDEIIDGGIILETDANVIAGKVASHSID+GAPLSEQTISQALATAREHLARSLLK
Sbjct: 123 CLDEIIDGGIILETDANVIAGKVASHSIDSGAPLSEQTISQALATAREHLARSLLK 178

[Close]

BLAST of MC03g0703 vs. TAIR 10
Match: AT1G60970.1 (SNARE-like superfamily protein )

HSP 1 Score: 282.3 bits (721), Expect = 2.6e-76
Identity = 144/177 (81.36%), Postives = 157/177 (88.70%), Query Frame = 0


Query: 1   MESCPSIKNILLLDSEGKRVAVKYYSDDWPTNSAKEAFEKAVFTKTQKTNARTEAEIAMF 60
           ME  P +KNILLLDSEGKRVAVKYYSDDWPTNSA+EAFEK+VFTKTQKTNARTE E+   
Sbjct: 1   MELPPKVKNILLLDSEGKRVAVKYYSDDWPTNSAQEAFEKSVFTKTQKTNARTEVEVTAL 60

Query: 61  ENNIVVYKFVQDLHFFVTGGEDENELILASVLQGFFDAVGILLRGNVEKKEALENLDLIL 120
           ENNIVVYKFVQDLHFFVTGGE+ENELILASVL+G FDAV +LLR NV+K+EAL+NLDLI 
Sbjct: 61  ENNIVVYKFVQDLHFFVTGGEEENELILASVLEGLFDAVTLLLRSNVDKREALDNLDLIF 120

Query: 121 LCLDEIIDGGIILETDANVIAGKVASHSIDTGAPLSEQTISQALATAREHLARSLLK 178
           L  DEIIDGGI+LETDANVIAGK   +S D  APLSEQTISQALATAREHL RSL+K
Sbjct: 121 LSFDEIIDGGIVLETDANVIAGKAGINSTDPNAPLSEQTISQALATAREHLTRSLMK 177

[Close]

BLAST of MC03g0703 vs. TAIR 10
Match: AT4G08520.1 (SNARE-like superfamily protein )

HSP 1 Score: 272.3 bits (695), Expect = 2.7e-73
Identity = 137/175 (78.29%), Postives = 155/175 (88.57%), Query Frame = 0


Query: 2   ESCPSIKNILLLDSEGKRVAVKYYSDDWPTNSAKEAFEKAVFTKTQKTNARTEAEIAMFE 61
           +SCP +KNILLLDSEGKRVAVKYYSDDW TN++K AFEK VF+KT KTNARTEAEI + E
Sbjct: 6   DSCPLVKNILLLDSEGKRVAVKYYSDDWATNASKLAFEKYVFSKTSKTNARTEAEITLLE 65

Query: 62  NNIVVYKFVQDLHFFVTGGEDENELILASVLQGFFDAVGILLRGNVEKKEALENLDLILL 121
           +NIVVYKF QDLHFFVTGGE+ENEL+L+SVLQGFFDAV +LLR NVEK EALENLDLI L
Sbjct: 66  SNIVVYKFAQDLHFFVTGGENENELVLSSVLQGFFDAVALLLRNNVEKMEALENLDLIFL 125

Query: 122 CLDEIIDGGIILETDANVIAGKVASHSIDTGAPLSEQTISQALATAREHLARSLL 177
           CLDE++D G++LETDANVIAGKVA  S +    LSEQT++QALATAREHLARSLL
Sbjct: 126 CLDEMVDQGMVLETDANVIAGKVAMQSAEASGSLSEQTLTQALATAREHLARSLL 180

[Close]

BLAST of MC03g0703 vs. TAIR 10
Match: AT3G09800.1 (SNARE-like superfamily protein )

HSP 1 Score: 271.9 bits (694), Expect = 3.5e-73
Identity = 136/175 (77.71%), Postives = 154/175 (88.00%), Query Frame = 0


Query: 2   ESCPSIKNILLLDSEGKRVAVKYYSDDWPTNSAKEAFEKAVFTKTQKTNARTEAEIAMFE 61
           +SCP +K ILLLDSEGKRVAVKYYSDDWPTN+AK +FEK VF+KT KTNARTEAEI + +
Sbjct: 4   DSCPLVKKILLLDSEGKRVAVKYYSDDWPTNAAKLSFEKYVFSKTSKTNARTEAEITLLD 63

Query: 62  NNIVVYKFVQDLHFFVTGGEDENELILASVLQGFFDAVGILLRGNVEKKEALENLDLILL 121
           +NI+VYKF QDLHFFVTGGE+ENELILASVLQGFFDAV +LLR NVEK EALENLDLI L
Sbjct: 64  SNIIVYKFAQDLHFFVTGGENENELILASVLQGFFDAVALLLRSNVEKMEALENLDLIFL 123

Query: 122 CLDEIIDGGIILETDANVIAGKVASHSIDTGAPLSEQTISQALATAREHLARSLL 177
           CLDE++D G++LETD NVIAGKVA  S +    LSEQT++QALATAREHLARSLL
Sbjct: 124 CLDEMVDQGVVLETDPNVIAGKVAMQSTEASGSLSEQTLTQALATAREHLARSLL 178

The following BLAST results are available for this feature:

BLAST of MC03g0703 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q940S5	3.7e-75	81.36	Coatomer subunit zeta-1 OS=Arabidopsis thaliana OX=3702 GN=At1g60970 PE=2 SV=1	[more]
Q6Z844	4.8e-75	80.11	Coatomer subunit zeta-2 OS=Oryza sativa subsp. japonica OX=39947 GN=COPZ2 PE=2 S...	[more]
Q84LG4	1.0e-72	78.29	Coatomer subunit zeta-2 OS=Arabidopsis thaliana OX=3702 GN=At3g09800 PE=2 SV=1	[more]
Q8H1F4	3.8e-72	78.29	Coatomer subunit zeta-3 OS=Arabidopsis thaliana OX=3702 GN=At4g08520 PE=2 SV=1	[more]
Q9MAX5	6.1e-70	76.14	Coatomer subunit zeta-1 OS=Oryza sativa subsp. japonica OX=39947 GN=COPZ1 PE=2 S...	[more]

BLAST of MC03g0703 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022139792.1	2.77e-117	100.00	coatomer subunit zeta-1-like [Momordica charantia]	[more]
XP_023542943.1	2.28e-116	98.87	coatomer subunit zeta-1-like isoform X2 [Cucurbita pepo subsp. pepo]	[more]
XP_022954697.1	9.28e-116	98.31	coatomer subunit zeta-2-like isoform X2 [Cucurbita moschata] >XP_022994906.1 coa...	[more]
XP_023542942.1	1.37e-115	98.86	coatomer subunit zeta-2-like isoform X1 [Cucurbita pepo subsp. pepo]	[more]
XP_038895636.1	3.78e-115	98.31	coatomer subunit zeta-1-like isoform X2 [Benincasa hispida]	[more]

BLAST of MC03g0703 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1CEY0	1.34e-117	100.00	Coatomer subunit zeta OS=Momordica charantia OX=3673 GN=LOC111010622 PE=3 SV=1	[more]
A0A6J1K0K6	4.49e-116	98.31	Coatomer subunit zeta OS=Cucurbita maxima OX=3661 GN=LOC111490490 PE=3 SV=1	[more]
A0A6J1GRN0	4.49e-116	98.31	Coatomer subunit zeta OS=Cucurbita moschata OX=3662 GN=LOC111456877 PE=3 SV=1	[more]
A0A6J1K2M3	2.69e-115	98.30	Coatomer subunit zeta OS=Cucurbita maxima OX=3661 GN=LOC111490490 PE=3 SV=1	[more]
A0A6J1GRL4	2.69e-115	98.30	Coatomer subunit zeta OS=Cucurbita moschata OX=3662 GN=LOC111456877 PE=3 SV=1	[more]

BLAST of MC03g0703 vs. TAIR 10


Match Name	E-value	Identity	Description
AT1G60970.1	2.6e-76	81.36	SNARE-like superfamily protein	[more]
AT4G08520.1	2.7e-73	78.29	SNARE-like superfamily protein	[more]
AT3G09800.1	3.5e-73	77.71	SNARE-like superfamily protein	[more]

InterPro

Analysis Name: InterPro Annotations of Bitter gourd (Dali-11) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR022775	AP complex, mu/sigma subunit	PFAM	PF01217	Clat_adaptor_s	coord: 7..145 e-value: 5.4E-23 score: 81.5
None	No IPR available	GENE3D	3.30.450.60		coord: 1..147 e-value: 1.1E-43 score: 150.6
None	No IPR available	PANTHER	PTHR11043:SF30	COATOMER SUBUNIT ZETA-2-LIKE	coord: 1..177
None	No IPR available	CDD	cd14829	Zeta-COP	coord: 8..143 e-value: 4.1417E-74 score: 216.643
IPR039652	Coatomer subunit zeta	PANTHER	PTHR11043	ZETA-COAT PROTEIN	coord: 1..177
IPR011012	Longin-like domain superfamily	SUPERFAMILY	64356	SNARE-like	coord: 7..147

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
MC03g0703.1	MC03g0703.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006886	intracellular protein transport
biological_process	GO:0006891	intra-Golgi vesicle-mediated transport
biological_process	GO:0006890	retrograde vesicle-mediated transport, Golgi to endoplasmic reticulum
cellular_component	GO:0030126	COPI vesicle coat
cellular_component	GO:0000139	Golgi membrane