MC03g0436 (gene) Bitter gourd (Dali-11) v1

Overview
NameMC03g0436
Typegene
OrganismMomordica charantia cv. Dali-11 (Bitter gourd (Dali-11) v1)
Description50S ribosomal protein L2, chloroplastic
LocationMC03: 11229614 .. 11229853 (-)
RNA-Seq ExpressionMC03g0436
SyntenyMC03g0436
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
TTAGCTAGAGCAGCAGGTGTTGTAGCGAAACTGATTGCAAAAGAGGGGAAATCGGCCACATTAAAATTACCTTCTGGGGAGGTCCGTTTGATATCCAAAAATTGCTCAGCAACAGTCGGACAAGTGGAGAATGCTGGGGTAAACCAGAAAAGTTTGGGTAGAGCCGGATCTAAATGTTGGCTAGGTAAGCGTCCTGTAGTAAGAGGAGTAGTTATGAACCCTGTAGACCATCCCCATGGG

mRNA sequence

TTAGCTAGAGCAGCAGGTGTTGTAGCGAAACTGATTGCAAAAGAGGGGAAATCGGCCACATTAAAATTACCTTCTGGGGAGGTCCGTTTGATATCCAAAAATTGCTCAGCAACAGTCGGACAAGTGGAGAATGCTGGGGTAAACCAGAAAAGTTTGGGTAGAGCCGGATCTAAATGTTGGCTAGGTAAGCGTCCTGTAGTAAGAGGAGTAGTTATGAACCCTGTAGACCATCCCCATGGG

Coding sequence (CDS)

TTAGCTAGAGCAGCAGGTGTTGTAGCGAAACTGATTGCAAAAGAGGGGAAATCGGCCACATTAAAATTACCTTCTGGGGAGGTCCGTTTGATATCCAAAAATTGCTCAGCAACAGTCGGACAAGTGGAGAATGCTGGGGTAAACCAGAAAAGTTTGGGTAGAGCCGGATCTAAATGTTGGCTAGGTAAGCGTCCTGTAGTAAGAGGAGTAGTTATGAACCCTGTAGACCATCCCCATGGG

Protein sequence

LARAAGVVAKLIAKEGKSATLKLPSGEVRLISKNCSATVGQVENAGVNQKSLGRAGSKCWLGKRPVVRGVVMNPVDHPHG
Homology
[Close]
BLAST of MC03g0436 vs. ExPASy Swiss-Prot
Match: Q14F95 (50S ribosomal protein L2-A, chloroplastic OS=Populus alba OX=43335 GN=rpl2-A PE=3 SV=1)

HSP 1 Score: 154.8 bits (390), Expect = 4.0e-37
Identity = 78/80 (97.50%), Postives = 78/80 (97.50%), Query Frame = 0 

Query: 1   LARAAGVVAKLIAKEGKSATLKLPSGEVRLISKNCSATVGQVENAGVNQKSLGRAGSKCW 60
           LARAAG VAKLIAKEGKSATLKLPSGEVRLISKNCSATVGQV NAGVNQKSLGRAGSKCW
Sbjct: 153 LARAAGAVAKLIAKEGKSATLKLPSGEVRLISKNCSATVGQVGNAGVNQKSLGRAGSKCW 212

Query: 61  LGKRPVVRGVVMNPVDHPHG 81
           LGKRPVVRGVVMNPVDHPHG
Sbjct: 213 LGKRPVVRGVVMNPVDHPHG 232

[Close]
BLAST of MC03g0436 vs. ExPASy Swiss-Prot
Match: Q14FB6 (50S ribosomal protein L2-B, chloroplastic OS=Populus alba OX=43335 GN=rpl2-B PE=3 SV=1)

HSP 1 Score: 154.8 bits (390), Expect = 4.0e-37
Identity = 78/80 (97.50%), Postives = 78/80 (97.50%), Query Frame = 0 

Query: 1   LARAAGVVAKLIAKEGKSATLKLPSGEVRLISKNCSATVGQVENAGVNQKSLGRAGSKCW 60
           LARAAG VAKLIAKEGKSATLKLPSGEVRLISKNCSATVGQV NAGVNQKSLGRAGSKCW
Sbjct: 152 LARAAGAVAKLIAKEGKSATLKLPSGEVRLISKNCSATVGQVGNAGVNQKSLGRAGSKCW 211

Query: 61  LGKRPVVRGVVMNPVDHPHG 81
           LGKRPVVRGVVMNPVDHPHG
Sbjct: 212 LGKRPVVRGVVMNPVDHPHG 231

[Close]
BLAST of MC03g0436 vs. ExPASy Swiss-Prot
Match: Q4VZK5 (50S ribosomal protein L2, chloroplastic OS=Cucumis sativus OX=3659 GN=rpl2-A PE=3 SV=1)

HSP 1 Score: 154.8 bits (390), Expect = 4.0e-37
Identity = 78/80 (97.50%), Postives = 78/80 (97.50%), Query Frame = 0 

Query: 1   LARAAGVVAKLIAKEGKSATLKLPSGEVRLISKNCSATVGQVENAGVNQKSLGRAGSKCW 60
           LARAAG VAKLIAKEGKSATLKLPSGEVRLISKNCSATVGQV NAGVNQKSLGRAGSKCW
Sbjct: 152 LARAAGAVAKLIAKEGKSATLKLPSGEVRLISKNCSATVGQVGNAGVNQKSLGRAGSKCW 211

Query: 61  LGKRPVVRGVVMNPVDHPHG 81
           LGKRPVVRGVVMNPVDHPHG
Sbjct: 212 LGKRPVVRGVVMNPVDHPHG 231

[Close]
BLAST of MC03g0436 vs. ExPASy Swiss-Prot
Match: A4GYV2 (50S ribosomal protein L2, chloroplastic OS=Populus trichocarpa OX=3694 GN=rpl2-A PE=3 SV=1)

HSP 1 Score: 154.8 bits (390), Expect = 4.0e-37
Identity = 78/80 (97.50%), Postives = 78/80 (97.50%), Query Frame = 0 

Query: 1   LARAAGVVAKLIAKEGKSATLKLPSGEVRLISKNCSATVGQVENAGVNQKSLGRAGSKCW 60
           LARAAG VAKLIAKEGKSATLKLPSGEVRLISKNCSATVGQV NAGVNQKSLGRAGSKCW
Sbjct: 152 LARAAGAVAKLIAKEGKSATLKLPSGEVRLISKNCSATVGQVGNAGVNQKSLGRAGSKCW 211

Query: 61  LGKRPVVRGVVMNPVDHPHG 81
           LGKRPVVRGVVMNPVDHPHG
Sbjct: 212 LGKRPVVRGVVMNPVDHPHG 231

[Close]
BLAST of MC03g0436 vs. ExPASy Swiss-Prot
Match: A4QK59 (50S ribosomal protein L2, chloroplastic OS=Arabis hirsuta OX=78191 GN=rpl2-A PE=3 SV=1)

HSP 1 Score: 153.3 bits (386), Expect = 1.2e-36
Identity = 77/80 (96.25%), Postives = 77/80 (96.25%), Query Frame = 0 

Query: 1   LARAAGVVAKLIAKEGKSATLKLPSGEVRLISKNCSATVGQVENAGVNQKSLGRAGSKCW 60
           LARAAG VAKLIAKEGKSATLKLPSGEVRLISKNCSATVGQV N GVNQKSLGRAGSKCW
Sbjct: 152 LARAAGAVAKLIAKEGKSATLKLPSGEVRLISKNCSATVGQVGNVGVNQKSLGRAGSKCW 211

Query: 61  LGKRPVVRGVVMNPVDHPHG 81
           LGKRPVVRGVVMNPVDHPHG
Sbjct: 212 LGKRPVVRGVVMNPVDHPHG 231

[Close]
BLAST of MC03g0436 vs. NCBI nr
Match: ABK96157.1 (unknown [Populus trichocarpa] >RQO99414.1 hypothetical protein POPTR_013G138584 [Populus trichocarpa])

HSP 1 Score: 154 bits (389), Expect = 3.29e-46
Identity = 78/80 (97.50%), Postives = 78/80 (97.50%), Query Frame = 0 

Query: 1  LARAAGVVAKLIAKEGKSATLKLPSGEVRLISKNCSATVGQVENAGVNQKSLGRAGSKCW 60
          LARAAG VAKLIAKEGKSATLKLPSGEVRLISKNCSATVGQV NAGVNQKSLGRAGSKCW
Sbjct: 20 LARAAGAVAKLIAKEGKSATLKLPSGEVRLISKNCSATVGQVGNAGVNQKSLGRAGSKCW 79

Query: 61 LGKRPVVRGVVMNPVDHPHG 80
          LGKRPVVRGVVMNPVDHPHG
Sbjct: 80 LGKRPVVRGVVMNPVDHPHG 99

[Close]
BLAST of MC03g0436 vs. NCBI nr
Match: TYK08770.1 (ribosomal protein L2 [Cucumis melo var. makuwa])

HSP 1 Score: 154 bits (389), Expect = 3.29e-46
Identity = 78/80 (97.50%), Postives = 78/80 (97.50%), Query Frame = 0 

Query: 1  LARAAGVVAKLIAKEGKSATLKLPSGEVRLISKNCSATVGQVENAGVNQKSLGRAGSKCW 60
          LARAAG VAKLIAKEGKSATLKLPSGEVRLISKNCSATVGQV NAGVNQKSLGRAGSKCW
Sbjct: 20 LARAAGAVAKLIAKEGKSATLKLPSGEVRLISKNCSATVGQVGNAGVNQKSLGRAGSKCW 79

Query: 61 LGKRPVVRGVVMNPVDHPHG 80
          LGKRPVVRGVVMNPVDHPHG
Sbjct: 80 LGKRPVVRGVVMNPVDHPHG 99

[Close]
BLAST of MC03g0436 vs. NCBI nr
Match: ACY07935.1 (ribosomal protein L2, partial [Cynomorium songaricum])

HSP 1 Score: 154 bits (389), Expect = 3.50e-46
Identity = 78/80 (97.50%), Postives = 78/80 (97.50%), Query Frame = 0 

Query: 1   LARAAGVVAKLIAKEGKSATLKLPSGEVRLISKNCSATVGQVENAGVNQKSLGRAGSKCW 60
           LARAAG VAKLIAKEGKSATLKLPSGEVRLISKNCSATVGQV NAGVNQKSLGRAGSKCW
Sbjct: 22  LARAAGAVAKLIAKEGKSATLKLPSGEVRLISKNCSATVGQVGNAGVNQKSLGRAGSKCW 81

Query: 61  LGKRPVVRGVVMNPVDHPHG 80
           LGKRPVVRGVVMNPVDHPHG
Sbjct: 82  LGKRPVVRGVVMNPVDHPHG 101

[Close]
BLAST of MC03g0436 vs. NCBI nr
Match: OMP12525.1 (Ribosomal protein L2 [Corchorus olitorius])

HSP 1 Score: 152 bits (385), Expect = 3.75e-46
Identity = 77/80 (96.25%), Postives = 77/80 (96.25%), Query Frame = 0 

Query: 1  LARAAGVVAKLIAKEGKSATLKLPSGEVRLISKNCSATVGQVENAGVNQKSLGRAGSKCW 60
          LARAAG VAKLIAKEGKSATLKLPSGEVRLISKNCSATVGQV N GVNQKSLGRAGSKCW
Sbjct: 20 LARAAGAVAKLIAKEGKSATLKLPSGEVRLISKNCSATVGQVGNVGVNQKSLGRAGSKCW 79

Query: 61 LGKRPVVRGVVMNPVDHPHG 80
          LGKRPVVRGVVMNPVDHPHG
Sbjct: 80 LGKRPVVRGVVMNPVDHPHG 99

[Close]
BLAST of MC03g0436 vs. NCBI nr
Match: CAA7013030.1 (unnamed protein product, partial [Microthlaspi erraticum] >CAA7013915.1 unnamed protein product, partial [Microthlaspi erraticum])

HSP 1 Score: 152 bits (385), Expect = 4.51e-46
Identity = 77/80 (96.25%), Postives = 77/80 (96.25%), Query Frame = 0 

Query: 1  LARAAGVVAKLIAKEGKSATLKLPSGEVRLISKNCSATVGQVENAGVNQKSLGRAGSKCW 60
          LARAAG VAKLIAKEGKSATLKLPSGEVRLISKNCSATVGQV N GVNQKSLGRAGSKCW
Sbjct: 20 LARAAGAVAKLIAKEGKSATLKLPSGEVRLISKNCSATVGQVGNVGVNQKSLGRAGSKCW 79

Query: 61 LGKRPVVRGVVMNPVDHPHG 80
          LGKRPVVRGVVMNPVDHPHG
Sbjct: 80 LGKRPVVRGVVMNPVDHPHG 99

[Close]
BLAST of MC03g0436 vs. ExPASy TrEMBL
Match: A9PIF4 (Ribosomal_L2_C domain-containing protein OS=Populus trichocarpa OX=3694 GN=POPTR_013G138584 PE=2 SV=1)

HSP 1 Score: 154 bits (389), Expect = 1.59e-46
Identity = 78/80 (97.50%), Postives = 78/80 (97.50%), Query Frame = 0 

Query: 1  LARAAGVVAKLIAKEGKSATLKLPSGEVRLISKNCSATVGQVENAGVNQKSLGRAGSKCW 60
          LARAAG VAKLIAKEGKSATLKLPSGEVRLISKNCSATVGQV NAGVNQKSLGRAGSKCW
Sbjct: 20 LARAAGAVAKLIAKEGKSATLKLPSGEVRLISKNCSATVGQVGNAGVNQKSLGRAGSKCW 79

Query: 61 LGKRPVVRGVVMNPVDHPHG 80
          LGKRPVVRGVVMNPVDHPHG
Sbjct: 80 LGKRPVVRGVVMNPVDHPHG 99

[Close]
BLAST of MC03g0436 vs. ExPASy TrEMBL
Match: A0A5D3CBP8 (Ribosomal protein L2 (Chloroplast) OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold534G00210 PE=3 SV=1)

HSP 1 Score: 154 bits (389), Expect = 1.59e-46
Identity = 78/80 (97.50%), Postives = 78/80 (97.50%), Query Frame = 0 

Query: 1  LARAAGVVAKLIAKEGKSATLKLPSGEVRLISKNCSATVGQVENAGVNQKSLGRAGSKCW 60
          LARAAG VAKLIAKEGKSATLKLPSGEVRLISKNCSATVGQV NAGVNQKSLGRAGSKCW
Sbjct: 20 LARAAGAVAKLIAKEGKSATLKLPSGEVRLISKNCSATVGQVGNAGVNQKSLGRAGSKCW 79

Query: 61 LGKRPVVRGVVMNPVDHPHG 80
          LGKRPVVRGVVMNPVDHPHG
Sbjct: 80 LGKRPVVRGVVMNPVDHPHG 99

[Close]
BLAST of MC03g0436 vs. ExPASy TrEMBL
Match: D0QXH7 (Ribosomal protein L2 (Fragment) OS=Cynomorium songaricum OX=627609 GN=rpl2 PE=3 SV=1)

HSP 1 Score: 154 bits (389), Expect = 1.69e-46
Identity = 78/80 (97.50%), Postives = 78/80 (97.50%), Query Frame = 0 

Query: 1   LARAAGVVAKLIAKEGKSATLKLPSGEVRLISKNCSATVGQVENAGVNQKSLGRAGSKCW 60
           LARAAG VAKLIAKEGKSATLKLPSGEVRLISKNCSATVGQV NAGVNQKSLGRAGSKCW
Sbjct: 22  LARAAGAVAKLIAKEGKSATLKLPSGEVRLISKNCSATVGQVGNAGVNQKSLGRAGSKCW 81

Query: 61  LGKRPVVRGVVMNPVDHPHG 80
           LGKRPVVRGVVMNPVDHPHG
Sbjct: 82  LGKRPVVRGVVMNPVDHPHG 101

[Close]
BLAST of MC03g0436 vs. ExPASy TrEMBL
Match: A0A1R3KZK2 (Ribosomal protein L2 OS=Corchorus olitorius OX=93759 GN=COLO4_03075 PE=4 SV=1)

HSP 1 Score: 152 bits (385), Expect = 1.82e-46
Identity = 77/80 (96.25%), Postives = 77/80 (96.25%), Query Frame = 0 

Query: 1  LARAAGVVAKLIAKEGKSATLKLPSGEVRLISKNCSATVGQVENAGVNQKSLGRAGSKCW 60
          LARAAG VAKLIAKEGKSATLKLPSGEVRLISKNCSATVGQV N GVNQKSLGRAGSKCW
Sbjct: 20 LARAAGAVAKLIAKEGKSATLKLPSGEVRLISKNCSATVGQVGNVGVNQKSLGRAGSKCW 79

Query: 61 LGKRPVVRGVVMNPVDHPHG 80
          LGKRPVVRGVVMNPVDHPHG
Sbjct: 80 LGKRPVVRGVVMNPVDHPHG 99

[Close]
BLAST of MC03g0436 vs. ExPASy TrEMBL
Match: A0A6D2HFA4 (Ribosomal_L2_C domain-containing protein (Fragment) OS=Microthlaspi erraticum OX=1685480 GN=MERR_LOCUS1149 PE=4 SV=1)

HSP 1 Score: 152 bits (385), Expect = 2.18e-46
Identity = 77/80 (96.25%), Postives = 77/80 (96.25%), Query Frame = 0 

Query: 1  LARAAGVVAKLIAKEGKSATLKLPSGEVRLISKNCSATVGQVENAGVNQKSLGRAGSKCW 60
          LARAAG VAKLIAKEGKSATLKLPSGEVRLISKNCSATVGQV N GVNQKSLGRAGSKCW
Sbjct: 20 LARAAGAVAKLIAKEGKSATLKLPSGEVRLISKNCSATVGQVGNVGVNQKSLGRAGSKCW 79

Query: 61 LGKRPVVRGVVMNPVDHPHG 80
          LGKRPVVRGVVMNPVDHPHG
Sbjct: 80 LGKRPVVRGVVMNPVDHPHG 99

[Close]
BLAST of MC03g0436 vs. TAIR 10
Match: ATCG00830.1 (ribosomal protein L2 )

HSP 1 Score: 153.3 bits (386), Expect = 8.3e-38
Identity = 77/80 (96.25%), Postives = 77/80 (96.25%), Query Frame = 0 

Query: 1   LARAAGVVAKLIAKEGKSATLKLPSGEVRLISKNCSATVGQVENAGVNQKSLGRAGSKCW 60
           LARAAG VAKLIAKEGKSATLKLPSGEVRLISKNCSATVGQV N GVNQKSLGRAGSKCW
Sbjct: 152 LARAAGAVAKLIAKEGKSATLKLPSGEVRLISKNCSATVGQVGNVGVNQKSLGRAGSKCW 211

Query: 61  LGKRPVVRGVVMNPVDHPHG 81
           LGKRPVVRGVVMNPVDHPHG
Sbjct: 212 LGKRPVVRGVVMNPVDHPHG 231

[Close]
BLAST of MC03g0436 vs. TAIR 10
Match: ATCG01310.1 (ribosomal protein L2 )

HSP 1 Score: 153.3 bits (386), Expect = 8.3e-38
Identity = 77/80 (96.25%), Postives = 77/80 (96.25%), Query Frame = 0 

Query: 1   LARAAGVVAKLIAKEGKSATLKLPSGEVRLISKNCSATVGQVENAGVNQKSLGRAGSKCW 60
           LARAAG VAKLIAKEGKSATLKLPSGEVRLISKNCSATVGQV N GVNQKSLGRAGSKCW
Sbjct: 152 LARAAGAVAKLIAKEGKSATLKLPSGEVRLISKNCSATVGQVGNVGVNQKSLGRAGSKCW 211

Query: 61  LGKRPVVRGVVMNPVDHPHG 81
           LGKRPVVRGVVMNPVDHPHG
Sbjct: 212 LGKRPVVRGVVMNPVDHPHG 231

[Close]
BLAST of MC03g0436 vs. TAIR 10
Match: AT2G44065.1 (Ribosomal protein L2 family )

HSP 1 Score: 79.3 bits (194), Expect = 1.5e-15
Identity = 41/81 (50.62%), Postives = 50/81 (61.73%), Query Frame = 0 

Query: 1   LARAAGVVAKLIAKEGKSATL-KLPSGEVRLISKNCSATVGQVENAGVNQKSLGRAGSKC 60
           + RAAG  AK++ +  K   L KLPSG+ + I+  C AT+G V N     K L +AG   
Sbjct: 87  MVRAAGTNAKILKEPAKGKCLIKLPSGDTKWINAKCRATIGTVSNPSHGTKKLYKAGQSR 146

Query: 61  WLGKRPVVRGVVMNPVDHPHG 81
           WLG RP VRGV MNP DHPHG
Sbjct: 147 WLGIRPKVRGVAMNPCDHPHG 167

[Close]
BLAST of MC03g0436 vs. TAIR 10
Match: AT2G44065.2 (Ribosomal protein L2 family )

HSP 1 Score: 79.3 bits (194), Expect = 1.5e-15
Identity = 41/81 (50.62%), Postives = 50/81 (61.73%), Query Frame = 0 

Query: 1   LARAAGVVAKLIAKEGKSATL-KLPSGEVRLISKNCSATVGQVENAGVNQKSLGRAGSKC 60
           + RAAG  AK++ +  K   L KLPSG+ + I+  C AT+G V N     K L +AG   
Sbjct: 87  MVRAAGTNAKILKEPAKGKCLIKLPSGDTKWINAKCRATIGTVSNPSHGTKKLYKAGQSR 146

Query: 61  WLGKRPVVRGVVMNPVDHPHG 81
           WLG RP VRGV MNP DHPHG
Sbjct: 147 WLGIRPKVRGVAMNPCDHPHG 167

[Close]
BLAST of MC03g0436 vs. TAIR 10
Match: AT3G51190.1 (Ribosomal protein L2 family )

HSP 1 Score: 66.6 bits (161), Expect = 1.0e-11
Identity = 41/91 (45.05%), Postives = 53/91 (58.24%), Query Frame = 0 

Query: 1   LARAAGVVAKLIAKEGKSAT--LKLPSGEVRLISKNCSATVGQVENAGVNQKSLGRAGS- 60
           LARA+G  A +IA   +S T  +KLPSG  +++   C A +GQV   G  +K L +AG+ 
Sbjct: 127 LARASGDYAIVIAHNPESNTTRVKLPSGSKKILPSACRAMIGQVAGGGRTEKPLLKAGNA 186

Query: 61  --------KCWLGKRPVVRGVVMNPVDHPHG 81
                    CW    PVVRGV MNPV+HPHG
Sbjct: 187 YHKYKAKRNCW----PVVRGVAMNPVEHPHG 213

The following BLAST results are available for this feature:
BLAST of MC03g0436 vs. ExPASy Swiss-Prot
Match NameE-valueIdentityDescription
Q14F954.0e-3797.5050S ribosomal protein L2-A, chloroplastic OS=Populus alba OX=43335 GN=rpl2-A PE=... [more]
Q14FB64.0e-3797.5050S ribosomal protein L2-B, chloroplastic OS=Populus alba OX=43335 GN=rpl2-B PE=... [more]
Q4VZK54.0e-3797.5050S ribosomal protein L2, chloroplastic OS=Cucumis sativus OX=3659 GN=rpl2-A PE=... [more]
A4GYV24.0e-3797.5050S ribosomal protein L2, chloroplastic OS=Populus trichocarpa OX=3694 GN=rpl2-A... [more]
A4QK591.2e-3696.2550S ribosomal protein L2, chloroplastic OS=Arabis hirsuta OX=78191 GN=rpl2-A PE=... [more]
BLAST of MC03g0436 vs. NCBI nr
Match NameE-valueIdentityDescription
ABK96157.13.29e-4697.50unknown [Populus trichocarpa] >RQO99414.1 hypothetical protein POPTR_013G138584 ... [more]
TYK08770.13.29e-4697.50ribosomal protein L2 [Cucumis melo var. makuwa][more]
ACY07935.13.50e-4697.50ribosomal protein L2, partial [Cynomorium songaricum][more]
OMP12525.13.75e-4696.25Ribosomal protein L2 [Corchorus olitorius][more]
CAA7013030.14.51e-4696.25unnamed protein product, partial [Microthlaspi erraticum] >CAA7013915.1 unnamed ... [more]
BLAST of MC03g0436 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
A9PIF41.59e-4697.50Ribosomal_L2_C domain-containing protein OS=Populus trichocarpa OX=3694 GN=POPTR... [more]
A0A5D3CBP81.59e-4697.50Ribosomal protein L2 (Chloroplast) OS=Cucumis melo var. makuwa OX=1194695 GN=E56... [more]
D0QXH71.69e-4697.50Ribosomal protein L2 (Fragment) OS=Cynomorium songaricum OX=627609 GN=rpl2 PE=3 ... [more]
A0A1R3KZK21.82e-4696.25Ribosomal protein L2 OS=Corchorus olitorius OX=93759 GN=COLO4_03075 PE=4 SV=1[more]
A0A6D2HFA42.18e-4696.25Ribosomal_L2_C domain-containing protein (Fragment) OS=Microthlaspi erraticum OX... [more]
BLAST of MC03g0436 vs. TAIR 10
Match NameE-valueIdentityDescription
ATCG00830.18.3e-3896.25ribosomal protein L2 [more]
ATCG01310.18.3e-3896.25ribosomal protein L2 [more]
AT2G44065.11.5e-1550.62Ribosomal protein L2 family [more]
AT2G44065.21.5e-1550.62Ribosomal protein L2 family [more]
AT3G51190.11.0e-1145.05Ribosomal protein L2 family [more]
InterPro
Analysis Name: InterPro Annotations of Bitter gourd (Dali-11) v1
Date Performed: 2021-10-25
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR022669Ribosomal protein L2, C-terminalSMARTSM01382Ribosomal_L2_C_2coord: 1..80
e-value: 9.2E-23
score: 91.6
IPR022669Ribosomal protein L2, C-terminalPFAMPF03947Ribosomal_L2_Ccoord: 1..80
e-value: 2.4E-32
score: 111.7
IPR014722Ribosomal protein L2, domain 2GENE3D2.30.30.30coord: 1..43
e-value: 2.0E-17
score: 64.9
IPR014726Ribosomal protein L2, domain 3GENE3D4.10.950.10Ribosomal protein L2, domain 3coord: 44..80
e-value: 7.7E-17
score: 63.2
NoneNo IPR availablePANTHERPTHR13691:SF42SUBFAMILY NOT NAMEDcoord: 1..80
IPR002171Ribosomal protein L2PANTHERPTHR13691RIBOSOMAL PROTEIN L2coord: 1..80
IPR022671Ribosomal protein L2, conserved sitePROSITEPS00467RIBOSOMAL_L2coord: 65..76
IPR008991Translation protein SH3-like domain superfamilySUPERFAMILY50104Translation proteins SH3-like domaincoord: 1..80

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
MC03g0436.1MC03g0436.1mRNA


GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0006412 translation
biological_process GO:0002181 cytoplasmic translation
cellular_component GO:0009507 chloroplast
cellular_component GO:0022625 cytosolic large ribosomal subunit
cellular_component GO:0005840 ribosome
molecular_function GO:0003723 RNA binding
molecular_function GO:0003735 structural constituent of ribosome
molecular_function GO:0016740 transferase activity