MC03g0421 (gene) Bitter gourd (Dali-11) v1

Overview


Name	MC03g0421
Type	gene
Organism	Momordica charantia cv. Dali-11 (Bitter gourd (Dali-11) v1)
Description	Ferredoxin
Location	MC03: 11143839 .. 11144697 (+)
RNA-Seq Expression	MC03g0421
Synteny	MC03g0421

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSpolypeptideutr3

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGTCTACCATGTCCACTGCAACTCTTCCTTCCCGCTTCACGTTGAATGCACCGTGTAAAAACCGATACCGAAGCACCATAATCAAGTGTCCATCTTCCATTGGATCTGCAAGCAACATTTCGAGATCCTTCGGCTTGAAATCGTCTCCCTCGTTCAGAACCTCTGCAATGGCCGTTTACAAGATCAAACTTGTGGAACCATGTGGGAAAGAGCACGAGTTTGAGGCATCGGATGATACTTACATTCTTGATGCAGCTGAAGAAGCGGGAGTCGATCTACCGTATTCTTGCAGGGCAGGTGCGTGCTCTACATGTGCTGGGAAAGTTGTTTCGGGTTCGGTCGACCAGTCGGATGGATCGTTTCTGGACGATACTCAAATGGCAGAGGGTTATTTGTTAACCTGTGTTTCACTCCCAACTGCAGACTGTGTCATTCACACACACAAGGAAGGAGAACTGATCTGAGTAATTATTGTAGCCGTTAAAAATTCTCCTTTTTTATGGGTTGGAGTTTTAAATCCTCATGTCATATCCTAAATAAATAAATTATAGATTTGAATGTCCTGGTATCCAAAGTGTATCAACGGCTTAAAAGTACCCGTCCTATATCCGAGTTTTGAAAGTTTCAATTTAATTCTCGTGATTTGAGTTTAGTTTCAATTTACTTAGAGGAGTTATAAAATCTCATCATAAGATTTTATAGTTGCTAAATGTTATAGGTATTACAAAGCTATATTAGTTTTGAGATATTTGTAATAATTATTTTTTAAGGCTAGTTGCTAATGTTTAAAAAGTATTGAAATTATATTTCTCCTTTTTTATGTGGAGCGGAGATTCGAAGATAACGAATTGAATTATA

mRNA sequence

ATGTCTACCATGTCCACTGCAACTCTTCCTTCCCGCTTCACGTTGAATGCACCGTGTAAAAACCGATACCGAAGCACCATAATCAAGTGTCCATCTTCCATTGGATCTGCAAGCAACATTTCGAGATCCTTCGGCTTGAAATCGTCTCCCTCGTTCAGAACCTCTGCAATGGCCGTTTACAAGATCAAACTTGTGGAACCATGTGGGAAAGAGCACGAGTTTGAGGCATCGGATGATACTTACATTCTTGATGCAGCTGAAGAAGCGGGAGTCGATCTACCGTATTCTTGCAGGGCAGGTGCGTGCTCTACATGTGCTGGGAAAGTTGTTTCGGGTTCGGTCGACCAGTCGGATGGATCGTTTCTGGACGATACTCAAATGGCAGAGGGTTATTTGTTAACCTGTGTTTCACTCCCAACTGCAGACTGTGTCATTCACACACACAAGGAAGGAGAACTGATCTGAGTAATTATTGTAGCCGTTAAAAATTCTCCTTTTTTATGGGTTGGAGTTTTAAATCCTCATGTCATATCCTAAATAAATAAATTATAGATTTGAATGTCCTGGTATCCAAAGTGTATCAACGGCTTAAAAGTACCCGTCCTATATCCGAGTTTTGAAAGTTTCAATTTAATTCTCGTGATTTGAGTTTAGTTTCAATTTACTTAGAGGAGTTATAAAATCTCATCATAAGATTTTATAGTTGCTAAATGTTATAGGTATTACAAAGCTATATTAGTTTTGAGATATTTGTAATAATTATTTTTTAAGGCTAGTTGCTAATGTTTAAAAAGTATTGAAATTATATTTCTCCTTTTTTATGTGGAGCGGAGATTCGAAGATAACGAATTGAATTATA

Coding sequence (CDS)

ATGTCTACCATGTCCACTGCAACTCTTCCTTCCCGCTTCACGTTGAATGCACCGTGTAAAAACCGATACCGAAGCACCATAATCAAGTGTCCATCTTCCATTGGATCTGCAAGCAACATTTCGAGATCCTTCGGCTTGAAATCGTCTCCCTCGTTCAGAACCTCTGCAATGGCCGTTTACAAGATCAAACTTGTGGAACCATGTGGGAAAGAGCACGAGTTTGAGGCATCGGATGATACTTACATTCTTGATGCAGCTGAAGAAGCGGGAGTCGATCTACCGTATTCTTGCAGGGCAGGTGCGTGCTCTACATGTGCTGGGAAAGTTGTTTCGGGTTCGGTCGACCAGTCGGATGGATCGTTTCTGGACGATACTCAAATGGCAGAGGGTTATTTGTTAACCTGTGTTTCACTCCCAACTGCAGACTGTGTCATTCACACACACAAGGAAGGAGAACTGATCTGA

Protein sequence

MSTMSTATLPSRFTLNAPCKNRYRSTIIKCPSSIGSASNISRSFGLKSSPSFRTSAMAVYKIKLVEPCGKEHEFEASDDTYILDAAEEAGVDLPYSCRAGACSTCAGKVVSGSVDQSDGSFLDDTQMAEGYLLTCVSLPTADCVIHTHKEGELI

Homology

[Close]

BLAST of MC03g0421 vs. ExPASy Swiss-Prot
Match: P27788 (Ferredoxin-3, chloroplastic OS=Zea mays OX=4577 GN=FDX3 PE=1 SV=1)

HSP 1 Score: 186.4 bits (472), Expect = 2.4e-46
Identity = 96/151 (63.58%), Postives = 113/151 (74.83%), Query Frame = 0


Query: 4   MSTATLPSRFTLNAPCKNRYRS-TIIKCPSSIGSASNISRSFGLKSSPSFRTSAMAVYKI 63
           MST+T  +  TL    +    S T +K PSS+   S +++   LK+S     SAMAVYK+
Sbjct: 1   MSTSTFATSCTLLGNVRTTQASQTAVKSPSSLSFFSQVTKVPSLKTSKKLDVSAMAVYKV 60

Query: 64  KLVEPCGKEHEFEASDDTYILDAAEEAGVDLPYSCRAGACSTCAGKVVSGSVDQSDGSFL 123
           KLV P G+EHEF+A DD YILDAAE AGV+LPYSCRAGACSTCAGK+ SGSVDQSDGSFL
Sbjct: 61  KLVGPEGEEHEFDAPDDAYILDAAETAGVELPYSCRAGACSTCAGKIESGSVDQSDGSFL 120

Query: 124 DDTQMAEGYLLTCVSLPTADCVIHTHKEGEL 154
           DD Q  EGY+LTCVS P +DCVIHTHKEG+L
Sbjct: 121 DDGQQEEGYVLTCVSYPKSDCVIHTHKEGDL 151

[Close]

BLAST of MC03g0421 vs. ExPASy Swiss-Prot
Match: Q9ZQG8 (Ferredoxin-3, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=FD3 PE=1 SV=1)

HSP 1 Score: 173.3 bits (438), Expect = 2.1e-42
Identity = 90/154 (58.44%), Postives = 114/154 (74.03%), Query Frame = 0


Query: 4   MSTATLPSRFTLNAPCKNRYRSTIIKCPS---SIGSASNISRSFGLKSSPSFRTSAM-AV 63
           M+T  + S     A  +++  + +I   S   S+GS   +SRSFGLK S +   + M AV
Sbjct: 1   MATVRISSTSMTKAVLRSQTTNKLITNKSYNLSVGSTKRVSRSFGLKCSANSGGATMSAV 60

Query: 64  YKIKLVEPCGKEHEFEASDDTYILDAAEEAGVDLPYSCRAGACSTCAGKVVSGSVDQSDG 123
           YK+KL+ P G+E EFE  DD YILDAAEEAGVDLPYSCRAGACSTCAG++VSG+VDQSDG
Sbjct: 61  YKVKLLGPDGQEDEFEVQDDQYILDAAEEAGVDLPYSCRAGACSTCAGQIVSGNVDQSDG 120

Query: 124 SFLDDTQMAEGYLLTCVSLPTADCVIHTHKEGEL 154
           SFL+D+ + +GY+LTCV+ P +DCVIHTHKE EL
Sbjct: 121 SFLEDSHLEKGYVLTCVAYPQSDCVIHTHKETEL 154

[Close]

BLAST of MC03g0421 vs. ExPASy Swiss-Prot
Match: P94044 (Ferredoxin-6, chloroplastic OS=Zea mays OX=4577 GN=FDX6 PE=2 SV=1)

HSP 1 Score: 167.2 bits (422), Expect = 1.5e-40
Identity = 89/154 (57.79%), Postives = 110/154 (71.43%), Query Frame = 0


Query: 4   MSTATLPSRFTLNAPCKNRYRSTIIKCPSSI---GSASNISRSFGLKSSPSFRTSAMAV- 63
           MSTAT P      +     Y++T     +++   G A   +R+ G + S  F  SA AV 
Sbjct: 1   MSTATAPRLPAPRSGASYHYQTTAAPAANTLSFAGHARQAARASGPRLSSRFVASAAAVL 60

Query: 64  YKIKLVEPCGKEHEFEASDDTYILDAAEEAGVDLPYSCRAGACSTCAGKVVSGSVDQSDG 123
           +K+KLV P G EHEFEA DDTYIL+AAE AGV+LP+SCRAG+CSTCAG++ +G VDQS+G
Sbjct: 61  HKVKLVGPDGTEHEFEAPDDTYILEAAETAGVELPFSCRAGSCSTCAGRMSAGEVDQSEG 120

Query: 124 SFLDDTQMAEGYLLTCVSLPTADCVIHTHKEGEL 154
           SFLDD QMAEGYLLTC+S P ADCVIHTHKE +L
Sbjct: 121 SFLDDGQMAEGYLLTCISYPKADCVIHTHKEEDL 154

[Close]

BLAST of MC03g0421 vs. ExPASy Swiss-Prot
Match: O04090 (Ferredoxin-1, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=FD1 PE=1 SV=1)

HSP 1 Score: 152.1 bits (383), Expect = 5.0e-36
Identity = 76/115 (66.09%), Postives = 91/115 (79.13%), Query Frame = 0


Query: 38  SNISRSFGLKSSPS--FRTSAMAVYKIKLVEPCGKEHEFEASDDTYILDAAEEAGVDLPY 97
           +N    FGLKSS +   R +AMA YK+K + P G E E E  +D Y+LDAAEEAG+DLPY
Sbjct: 31  ANTQSLFGLKSSTARGGRVTAMATYKVKFITPEG-EQEVECEEDVYVLDAAEEAGLDLPY 90

Query: 98  SCRAGACSTCAGKVVSGSVDQSDGSFLDDTQMAEGYLLTCVSLPTADCVIHTHKE 151
           SCRAG+CS+CAGKVVSGS+DQSD SFLDD QM+EGY+LTCV+ PT+D VI THKE
Sbjct: 91  SCRAGSCSSCAGKVVSGSIDQSDQSFLDDEQMSEGYVLTCVAYPTSDVVIETHKE 144

[Close]

BLAST of MC03g0421 vs. ExPASy Swiss-Prot
Match: O04683 (Ferredoxin-1, chloroplastic OS=Mesembryanthemum crystallinum OX=3544 PE=2 SV=1)

HSP 1 Score: 152.1 bits (383), Expect = 5.0e-36
Identity = 85/154 (55.19%), Postives = 104/154 (67.53%), Query Frame = 0


Query: 2   STMSTATLPSRFTLNAPCKNRYRSTIIKCPSSIGSASNISRS-FGLKSSPS-FRTSAMAV 61
           + +S AT+ + F    P            P +    +N+ R+ FGLKSS S  R +AMA 
Sbjct: 6   AALSGATMSTAFAPKTP------------PMTAALPTNVGRALFGLKSSASRGRVTAMAA 65

Query: 62  YKIKLVEPCGKEHEFEASDDTYILDAAEEAGVDLPYSCRAGACSTCAGKVVSGSVDQSDG 121
           YK+ LV P GK+ E E  DD YILDAAEEAG+DLPYSCRAG+CS+CAGKV SGSV+Q DG
Sbjct: 66  YKVTLVTPEGKQ-ELECPDDVYILDAAEEAGIDLPYSCRAGSCSSCAGKVTSGSVNQDDG 125

Query: 122 SFLDDTQMAEGYLLTCVSLPTADCVIHTHKEGEL 154
           SFLDD Q+ EG++LTCV+ PT D  I THKE EL
Sbjct: 126 SFLDDDQIKEGWVLTCVAYPTGDVTIETHKEEEL 146

[Close]

BLAST of MC03g0421 vs. NCBI nr
Match: XP_022142635.1 (ferredoxin, root R-B2 [Momordica charantia])

HSP 1 Score: 305 bits (782), Expect = 1.28e-104
Identity = 153/154 (99.35%), Postives = 153/154 (99.35%), Query Frame = 0


Query: 1   MSTMSTATLPSRFTLNAPCKNRYRSTIIKCPSSIGSASNISRSFGLKSSPSFRTSAMAVY 60
           MSTMSTATLPSRFTLNAPCKNRYR TIIKCPSSIGSASNISRSFGLKSSPSFRTSAMAVY
Sbjct: 1   MSTMSTATLPSRFTLNAPCKNRYRITIIKCPSSIGSASNISRSFGLKSSPSFRTSAMAVY 60

Query: 61  KIKLVEPCGKEHEFEASDDTYILDAAEEAGVDLPYSCRAGACSTCAGKVVSGSVDQSDGS 120
           KIKLVEPCGKEHEFEASDDTYILDAAEEAGVDLPYSCRAGACSTCAGKVVSGSVDQSDGS
Sbjct: 61  KIKLVEPCGKEHEFEASDDTYILDAAEEAGVDLPYSCRAGACSTCAGKVVSGSVDQSDGS 120

Query: 121 FLDDTQMAEGYLLTCVSLPTADCVIHTHKEGELI 154
           FLDDTQMAEGYLLTCVSLPTADCVIHTHKEGELI
Sbjct: 121 FLDDTQMAEGYLLTCVSLPTADCVIHTHKEGELI 154

[Close]

BLAST of MC03g0421 vs. NCBI nr
Match: XP_022944833.1 (uncharacterized protein LOC111449248 isoform X2 [Cucurbita moschata])

HSP 1 Score: 270 bits (690), Expect = 1.46e-90
Identity = 135/156 (86.54%), Postives = 145/156 (92.95%), Query Frame = 0


Query: 1   MSTMSTATLPSR--FTLNAPCKNRYRSTIIKCPSSIGSASNISRSFGLKSSPSFRTSAMA 60
           MSTMSTA LPSR  F  +APCKN++RSTIIKCPSSIGS SNIS+SFGLKSSPS RT+AMA
Sbjct: 1   MSTMSTAKLPSRTMFNTSAPCKNQFRSTIIKCPSSIGSTSNISKSFGLKSSPSSRTTAMA 60

Query: 61  VYKIKLVEPCGKEHEFEASDDTYILDAAEEAGVDLPYSCRAGACSTCAGKVVSGSVDQSD 120
           VYKIKL+EPCGKEHEFEASDDTYILDAAEEAG+DLPYSCRAGACSTCAGK VSGSVDQSD
Sbjct: 61  VYKIKLIEPCGKEHEFEASDDTYILDAAEEAGIDLPYSCRAGACSTCAGKFVSGSVDQSD 120

Query: 121 GSFLDDTQMAEGYLLTCVSLPTADCVIHTHKEGELI 154
           GSFLDD+QM EGYLLTC+S PT+DCVI THKEGELI
Sbjct: 121 GSFLDDSQMEEGYLLTCISHPTSDCVILTHKEGELI 156

[Close]

BLAST of MC03g0421 vs. NCBI nr
Match: XP_022944832.1 (uncharacterized protein LOC111449248 isoform X1 [Cucurbita moschata])

HSP 1 Score: 270 bits (690), Expect = 1.25e-89
Identity = 135/156 (86.54%), Postives = 145/156 (92.95%), Query Frame = 0


Query: 1   MSTMSTATLPSR--FTLNAPCKNRYRSTIIKCPSSIGSASNISRSFGLKSSPSFRTSAMA 60
           MSTMSTA LPSR  F  +APCKN++RSTIIKCPSSIGS SNIS+SFGLKSSPS RT+AMA
Sbjct: 64  MSTMSTAKLPSRTMFNTSAPCKNQFRSTIIKCPSSIGSTSNISKSFGLKSSPSSRTTAMA 123

Query: 61  VYKIKLVEPCGKEHEFEASDDTYILDAAEEAGVDLPYSCRAGACSTCAGKVVSGSVDQSD 120
           VYKIKL+EPCGKEHEFEASDDTYILDAAEEAG+DLPYSCRAGACSTCAGK VSGSVDQSD
Sbjct: 124 VYKIKLIEPCGKEHEFEASDDTYILDAAEEAGIDLPYSCRAGACSTCAGKFVSGSVDQSD 183

Query: 121 GSFLDDTQMAEGYLLTCVSLPTADCVIHTHKEGELI 154
           GSFLDD+QM EGYLLTC+S PT+DCVI THKEGELI
Sbjct: 184 GSFLDDSQMEEGYLLTCISHPTSDCVILTHKEGELI 219

[Close]

BLAST of MC03g0421 vs. NCBI nr
Match: XP_038893731.1 (ferredoxin, root R-B2 [Benincasa hispida] >XP_038893732.1 ferredoxin, root R-B2 [Benincasa hispida])

HSP 1 Score: 266 bits (681), Expect = 3.22e-89
Identity = 133/154 (86.36%), Postives = 139/154 (90.26%), Query Frame = 0


Query: 1   MSTMSTATLPSRFTLNAPCKNRYRSTIIKCPSSIGSASNISRSFGLKSSPSFRTSAMAVY 60
           MSTMSTA L + F  NAPCKNR RSTIIKCPSSI S SNIS+ FGLKS PSFR  AMAVY
Sbjct: 1   MSTMSTAKLSTHFMYNAPCKNRLRSTIIKCPSSISSMSNISKFFGLKSRPSFRACAMAVY 60

Query: 61  KIKLVEPCGKEHEFEASDDTYILDAAEEAGVDLPYSCRAGACSTCAGKVVSGSVDQSDGS 120
           KIKLVEP G EHEFEASDD YILDAAEEAG+DLPYSCRAGACSTCAGK+VSGSVDQSDGS
Sbjct: 61  KIKLVEPSGTEHEFEASDDAYILDAAEEAGIDLPYSCRAGACSTCAGKMVSGSVDQSDGS 120

Query: 121 FLDDTQMAEGYLLTCVSLPTADCVIHTHKEGELI 154
           FLDD+QMAEGYLLTCVSLPTADCVIHTHKEGEL+
Sbjct: 121 FLDDSQMAEGYLLTCVSLPTADCVIHTHKEGELL 154

[Close]

BLAST of MC03g0421 vs. NCBI nr
Match: KAG6573622.1 (Ferredoxin-3, chloroplastic, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 265 bits (677), Expect = 1.27e-88
Identity = 132/153 (86.27%), Postives = 142/153 (92.81%), Query Frame = 0


Query: 4   MSTATLPSR--FTLNAPCKNRYRSTIIKCPSSIGSASNISRSFGLKSSPSFRTSAMAVYK 63
           MSTA LPSR  F  +APCKN++RSTIIKCPSSIGS SNIS+SFGLKSSPS RT+AMAVYK
Sbjct: 1   MSTAKLPSRTMFNTSAPCKNQFRSTIIKCPSSIGSTSNISKSFGLKSSPSSRTTAMAVYK 60

Query: 64  IKLVEPCGKEHEFEASDDTYILDAAEEAGVDLPYSCRAGACSTCAGKVVSGSVDQSDGSF 123
           IKL+EPCGKEHEFEASDDTYILDAAEEAG+DLPYSCRAGACSTCAGK VSGSVDQSDGSF
Sbjct: 61  IKLIEPCGKEHEFEASDDTYILDAAEEAGIDLPYSCRAGACSTCAGKFVSGSVDQSDGSF 120

Query: 124 LDDTQMAEGYLLTCVSLPTADCVIHTHKEGELI 154
           LDD+QM EGYLLTC+S PT+DCVI THKEGELI
Sbjct: 121 LDDSQMEEGYLLTCISHPTSDCVILTHKEGELI 153

[Close]

BLAST of MC03g0421 vs. ExPASy TrEMBL
Match: A0A6J1CLH4 (Ferredoxin OS=Momordica charantia OX=3673 GN=LOC111012698 PE=3 SV=1)

HSP 1 Score: 305 bits (782), Expect = 6.19e-105
Identity = 153/154 (99.35%), Postives = 153/154 (99.35%), Query Frame = 0


Query: 1   MSTMSTATLPSRFTLNAPCKNRYRSTIIKCPSSIGSASNISRSFGLKSSPSFRTSAMAVY 60
           MSTMSTATLPSRFTLNAPCKNRYR TIIKCPSSIGSASNISRSFGLKSSPSFRTSAMAVY
Sbjct: 1   MSTMSTATLPSRFTLNAPCKNRYRITIIKCPSSIGSASNISRSFGLKSSPSFRTSAMAVY 60

Query: 61  KIKLVEPCGKEHEFEASDDTYILDAAEEAGVDLPYSCRAGACSTCAGKVVSGSVDQSDGS 120
           KIKLVEPCGKEHEFEASDDTYILDAAEEAGVDLPYSCRAGACSTCAGKVVSGSVDQSDGS
Sbjct: 61  KIKLVEPCGKEHEFEASDDTYILDAAEEAGVDLPYSCRAGACSTCAGKVVSGSVDQSDGS 120

Query: 121 FLDDTQMAEGYLLTCVSLPTADCVIHTHKEGELI 154
           FLDDTQMAEGYLLTCVSLPTADCVIHTHKEGELI
Sbjct: 121 FLDDTQMAEGYLLTCVSLPTADCVIHTHKEGELI 154

[Close]

BLAST of MC03g0421 vs. ExPASy TrEMBL
Match: A0A6J1FZ54 (Ferredoxin OS=Cucurbita moschata OX=3662 GN=LOC111449248 PE=3 SV=1)

HSP 1 Score: 270 bits (690), Expect = 7.08e-91
Identity = 135/156 (86.54%), Postives = 145/156 (92.95%), Query Frame = 0


Query: 1   MSTMSTATLPSR--FTLNAPCKNRYRSTIIKCPSSIGSASNISRSFGLKSSPSFRTSAMA 60
           MSTMSTA LPSR  F  +APCKN++RSTIIKCPSSIGS SNIS+SFGLKSSPS RT+AMA
Sbjct: 1   MSTMSTAKLPSRTMFNTSAPCKNQFRSTIIKCPSSIGSTSNISKSFGLKSSPSSRTTAMA 60

Query: 61  VYKIKLVEPCGKEHEFEASDDTYILDAAEEAGVDLPYSCRAGACSTCAGKVVSGSVDQSD 120
           VYKIKL+EPCGKEHEFEASDDTYILDAAEEAG+DLPYSCRAGACSTCAGK VSGSVDQSD
Sbjct: 61  VYKIKLIEPCGKEHEFEASDDTYILDAAEEAGIDLPYSCRAGACSTCAGKFVSGSVDQSD 120

Query: 121 GSFLDDTQMAEGYLLTCVSLPTADCVIHTHKEGELI 154
           GSFLDD+QM EGYLLTC+S PT+DCVI THKEGELI
Sbjct: 121 GSFLDDSQMEEGYLLTCISHPTSDCVILTHKEGELI 156

[Close]

BLAST of MC03g0421 vs. ExPASy TrEMBL
Match: A0A6J1FZ83 (Ferredoxin OS=Cucurbita moschata OX=3662 GN=LOC111449248 PE=3 SV=1)

HSP 1 Score: 270 bits (690), Expect = 6.03e-90
Identity = 135/156 (86.54%), Postives = 145/156 (92.95%), Query Frame = 0


Query: 1   MSTMSTATLPSR--FTLNAPCKNRYRSTIIKCPSSIGSASNISRSFGLKSSPSFRTSAMA 60
           MSTMSTA LPSR  F  +APCKN++RSTIIKCPSSIGS SNIS+SFGLKSSPS RT+AMA
Sbjct: 64  MSTMSTAKLPSRTMFNTSAPCKNQFRSTIIKCPSSIGSTSNISKSFGLKSSPSSRTTAMA 123

Query: 61  VYKIKLVEPCGKEHEFEASDDTYILDAAEEAGVDLPYSCRAGACSTCAGKVVSGSVDQSD 120
           VYKIKL+EPCGKEHEFEASDDTYILDAAEEAG+DLPYSCRAGACSTCAGK VSGSVDQSD
Sbjct: 124 VYKIKLIEPCGKEHEFEASDDTYILDAAEEAGIDLPYSCRAGACSTCAGKFVSGSVDQSD 183

Query: 121 GSFLDDTQMAEGYLLTCVSLPTADCVIHTHKEGELI 154
           GSFLDD+QM EGYLLTC+S PT+DCVI THKEGELI
Sbjct: 184 GSFLDDSQMEEGYLLTCISHPTSDCVILTHKEGELI 219

[Close]

BLAST of MC03g0421 vs. ExPASy TrEMBL
Match: A0A6J1HTH8 (Ferredoxin OS=Cucurbita maxima OX=3661 GN=LOC111466612 PE=3 SV=1)

HSP 1 Score: 262 bits (670), Expect = 7.92e-88
Identity = 132/156 (84.62%), Postives = 143/156 (91.67%), Query Frame = 0


Query: 1   MSTMSTATLPSR--FTLNAPCKNRYRSTIIKCPSSIGSASNISRSFGLKSSPSFRTSAMA 60
           MSTMSTA LPSR  F  +APCKN++RS+IIKCPSSIGS SNIS+SFGLKS  S RT+AMA
Sbjct: 1   MSTMSTAKLPSRTMFNRSAPCKNQFRSSIIKCPSSIGSTSNISKSFGLKSLHSSRTTAMA 60

Query: 61  VYKIKLVEPCGKEHEFEASDDTYILDAAEEAGVDLPYSCRAGACSTCAGKVVSGSVDQSD 120
           VYKIKL+EPCGKEHEFEASDDTYILDAAEEAG+DLPYSCRAGACSTCAGK VSGSVDQSD
Sbjct: 61  VYKIKLIEPCGKEHEFEASDDTYILDAAEEAGIDLPYSCRAGACSTCAGKFVSGSVDQSD 120

Query: 121 GSFLDDTQMAEGYLLTCVSLPTADCVIHTHKEGELI 154
           GSFLDD+QM EGYLLTC+S PT+DCVI THKEGELI
Sbjct: 121 GSFLDDSQMEEGYLLTCISHPTSDCVILTHKEGELI 156

[Close]

BLAST of MC03g0421 vs. ExPASy TrEMBL
Match: A0A0A0LY90 (Ferredoxin OS=Cucumis sativus OX=3659 GN=Csa_1G163160 PE=3 SV=1)

HSP 1 Score: 259 bits (662), Expect = 1.23e-86
Identity = 128/154 (83.12%), Postives = 135/154 (87.66%), Query Frame = 0


Query: 1   MSTMSTATLPSRFTLNAPCKNRYRSTIIKCPSSIGSASNISRSFGLKSSPSFRTSAMAVY 60
           MSTMSTA LP+ F  N   KN+  STIIKCPSSIGS  NI +SFGL S PSFR  AMA +
Sbjct: 1   MSTMSTAKLPTHFMYNTQSKNQLGSTIIKCPSSIGSTRNILKSFGLNSRPSFRACAMAAF 60

Query: 61  KIKLVEPCGKEHEFEASDDTYILDAAEEAGVDLPYSCRAGACSTCAGKVVSGSVDQSDGS 120
           KIKLVEPCGKEHEFEASDDTYILDAAEEAG+DLPYSCRAGACSTCAGK+VSGSVDQSDGS
Sbjct: 61  KIKLVEPCGKEHEFEASDDTYILDAAEEAGIDLPYSCRAGACSTCAGKIVSGSVDQSDGS 120

Query: 121 FLDDTQMAEGYLLTCVSLPTADCVIHTHKEGELI 154
           FLDD QMA GYLLTC+SLPTADCVIHTHKEGELI
Sbjct: 121 FLDDDQMANGYLLTCISLPTADCVIHTHKEGELI 154

[Close]

BLAST of MC03g0421 vs. TAIR 10
Match: AT2G27510.1 (ferredoxin 3 )

HSP 1 Score: 173.3 bits (438), Expect = 1.5e-43
Identity = 90/154 (58.44%), Postives = 114/154 (74.03%), Query Frame = 0


Query: 4   MSTATLPSRFTLNAPCKNRYRSTIIKCPS---SIGSASNISRSFGLKSSPSFRTSAM-AV 63
           M+T  + S     A  +++  + +I   S   S+GS   +SRSFGLK S +   + M AV
Sbjct: 1   MATVRISSTSMTKAVLRSQTTNKLITNKSYNLSVGSTKRVSRSFGLKCSANSGGATMSAV 60

Query: 64  YKIKLVEPCGKEHEFEASDDTYILDAAEEAGVDLPYSCRAGACSTCAGKVVSGSVDQSDG 123
           YK+KL+ P G+E EFE  DD YILDAAEEAGVDLPYSCRAGACSTCAG++VSG+VDQSDG
Sbjct: 61  YKVKLLGPDGQEDEFEVQDDQYILDAAEEAGVDLPYSCRAGACSTCAGQIVSGNVDQSDG 120

Query: 124 SFLDDTQMAEGYLLTCVSLPTADCVIHTHKEGEL 154
           SFL+D+ + +GY+LTCV+ P +DCVIHTHKE EL
Sbjct: 121 SFLEDSHLEKGYVLTCVAYPQSDCVIHTHKETEL 154

[Close]

BLAST of MC03g0421 vs. TAIR 10
Match: AT1G10960.1 (ferredoxin 1 )

HSP 1 Score: 152.1 bits (383), Expect = 3.5e-37
Identity = 76/115 (66.09%), Postives = 91/115 (79.13%), Query Frame = 0


Query: 38  SNISRSFGLKSSPS--FRTSAMAVYKIKLVEPCGKEHEFEASDDTYILDAAEEAGVDLPY 97
           +N    FGLKSS +   R +AMA YK+K + P G E E E  +D Y+LDAAEEAG+DLPY
Sbjct: 31  ANTQSLFGLKSSTARGGRVTAMATYKVKFITPEG-EQEVECEEDVYVLDAAEEAGLDLPY 90

Query: 98  SCRAGACSTCAGKVVSGSVDQSDGSFLDDTQMAEGYLLTCVSLPTADCVIHTHKE 151
           SCRAG+CS+CAGKVVSGS+DQSD SFLDD QM+EGY+LTCV+ PT+D VI THKE
Sbjct: 91  SCRAGSCSSCAGKVVSGSIDQSDQSFLDDEQMSEGYVLTCVAYPTSDVVIETHKE 144

[Close]

BLAST of MC03g0421 vs. TAIR 10
Match: AT1G60950.1 (2Fe-2S ferredoxin-like superfamily protein )

HSP 1 Score: 146.7 bits (369), Expect = 1.5e-35
Identity = 79/155 (50.97%), Postives = 103/155 (66.45%), Query Frame = 0


Query: 2   STMSTATLPSRFTLNAPCKNRYRSTIIKCPSSIGSASNISRSFGLKSSPS--FRTSAMAV 61
           + +S+A + + F   +P     RS           ++N    FGLKS  +   R +AMA 
Sbjct: 4   TALSSAIVGTSFIRRSPAPISLRSL---------PSANTQSLFGLKSGTARGGRVTAMAT 63

Query: 62  YKIKLVEPCGKEHEFEASDDTYILDAAEEAGVDLPYSCRAGACSTCAGKVVSGSVDQSDG 121
           YK+K + P G E E E  DD Y+LDAAEEAG+DLPYSCRAG+CS+CAGKVVSGSVDQSD 
Sbjct: 64  YKVKFITPEG-ELEVECDDDVYVLDAAEEAGIDLPYSCRAGSCSSCAGKVVSGSVDQSDQ 123

Query: 122 SFLDDTQMAEGYLLTCVSLPTADCVIHTHKEGELI 155
           SFLDD Q+ EG++LTC + PT+D  I THKE +++
Sbjct: 124 SFLDDEQIGEGFVLTCAAYPTSDVTIETHKEEDIV 148

[Close]

BLAST of MC03g0421 vs. TAIR 10
Match: AT5G10000.1 (ferredoxin 4 )

HSP 1 Score: 130.6 bits (327), Expect = 1.1e-30
Identity = 67/143 (46.85%), Postives = 94/143 (65.73%), Query Frame = 0


Query: 23  YRSTIIKCP---------SSIGSASNISRSFGLKSSPS--FRTSAMAVYKIKLVEPCGKE 82
           Y S IIK P         + + +  N +  FGL SS     +  A    K+KL+ P G+E
Sbjct: 6   YSSYIIKIPVISRISPSQAQLTTRLNNTTYFGLSSSRGNFGKVFAKESRKVKLISPEGEE 65

Query: 83  HEFEASDDTYILDAAEEAGVDLPYSCRAGACSTCAGKVVSGSVDQSDGSFLDDTQMAEGY 142
            E E ++D  IL++AE AG++LPYSCR+G C TC GK+VSG VDQS GSFL++ Q+ +GY
Sbjct: 66  QEIEGNEDCCILESAENAGLELPYSCRSGTCGTCCGKLVSGKVDQSLGSFLEEEQIQKGY 125

Query: 143 LLTCVSLPTADCVIHTHKEGELI 155
           +LTC++LP  DCV++THK+ +LI
Sbjct: 126 ILTCIALPLEDCVVYTHKQSDLI 148

[Close]

BLAST of MC03g0421 vs. TAIR 10
Match: AT4G14890.1 (2Fe-2S ferredoxin-like superfamily protein )

HSP 1 Score: 81.6 bits (200), Expect = 5.9e-16
Identity = 55/153 (35.95%), Postives = 76/153 (49.67%), Query Frame = 0


Query: 5   STATLPSRFTLNA---PCKNRYRSTIIKCPSSIGSASNISRSFGLKSSPSFRTSAMAVYK 64
           ST +LP  +  N+   P +N   ST     + + +   I+R+                YK
Sbjct: 11  STISLPKPYLSNSFSFPLRNATLSTTTNRRNFLTTGRIIARA----------------YK 70

Query: 65  IKLVEPCGKEHEFEASDDTYILDAAEEAGVDLPYSCRAGACSTCAGKVVSGSVDQSDGSF 124
           + +VE  GK  E E   D  IL  A ++G+D+PY C  G C TC  K+V+G+VDQS G  
Sbjct: 71  V-VVEHDGKTTELEVEPDETILSKALDSGLDVPYDCNLGVCMTCPAKLVTGTVDQSGGML 130

Query: 125 LDDTQMAEGYLLTCVSLPTADCVIHTHKEGELI 155
            DD  +  GY L C S PT+DC I    E EL+
Sbjct: 131 SDDV-VERGYTLLCASYPTSDCHIKMIPEEELL 145

The following BLAST results are available for this feature:

BLAST of MC03g0421 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
P27788	2.4e-46	63.58	Ferredoxin-3, chloroplastic OS=Zea mays OX=4577 GN=FDX3 PE=1 SV=1	[more]
Q9ZQG8	2.1e-42	58.44	Ferredoxin-3, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=FD3 PE=1 SV=1	[more]
P94044	1.5e-40	57.79	Ferredoxin-6, chloroplastic OS=Zea mays OX=4577 GN=FDX6 PE=2 SV=1	[more]
O04090	5.0e-36	66.09	Ferredoxin-1, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=FD1 PE=1 SV=1	[more]
O04683	5.0e-36	55.19	Ferredoxin-1, chloroplastic OS=Mesembryanthemum crystallinum OX=3544 PE=2 SV=1	[more]

BLAST of MC03g0421 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022142635.1	1.28e-104	99.35	ferredoxin, root R-B2 [Momordica charantia]	[more]
XP_022944833.1	1.46e-90	86.54	uncharacterized protein LOC111449248 isoform X2 [Cucurbita moschata]	[more]
XP_022944832.1	1.25e-89	86.54	uncharacterized protein LOC111449248 isoform X1 [Cucurbita moschata]	[more]
XP_038893731.1	3.22e-89	86.36	ferredoxin, root R-B2 [Benincasa hispida] >XP_038893732.1 ferredoxin, root R-B2 ...	[more]
KAG6573622.1	1.27e-88	86.27	Ferredoxin-3, chloroplastic, partial [Cucurbita argyrosperma subsp. sororia]	[more]

BLAST of MC03g0421 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1CLH4	6.19e-105	99.35	Ferredoxin OS=Momordica charantia OX=3673 GN=LOC111012698 PE=3 SV=1	[more]
A0A6J1FZ54	7.08e-91	86.54	Ferredoxin OS=Cucurbita moschata OX=3662 GN=LOC111449248 PE=3 SV=1	[more]
A0A6J1FZ83	6.03e-90	86.54	Ferredoxin OS=Cucurbita moschata OX=3662 GN=LOC111449248 PE=3 SV=1	[more]
A0A6J1HTH8	7.92e-88	84.62	Ferredoxin OS=Cucurbita maxima OX=3661 GN=LOC111466612 PE=3 SV=1	[more]
A0A0A0LY90	1.23e-86	83.12	Ferredoxin OS=Cucumis sativus OX=3659 GN=Csa_1G163160 PE=3 SV=1	[more]

BLAST of MC03g0421 vs. TAIR 10


Match Name	E-value	Identity	Description
AT2G27510.1	1.5e-43	58.44	ferredoxin 3	[more]
AT1G10960.1	3.5e-37	66.09	ferredoxin 1	[more]
AT1G60950.1	1.5e-35	50.97	2Fe-2S ferredoxin-like superfamily protein	[more]
AT5G10000.1	1.1e-30	46.85	ferredoxin 4	[more]
AT4G14890.1	5.9e-16	35.95	2Fe-2S ferredoxin-like superfamily protein	[more]

InterPro

Analysis Name: InterPro Annotations of Bitter gourd (Dali-11) v1
Date Performed: 2021-10-25

Position :

Zoom :

x 1


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR012675	Beta-grasp domain superfamily	GENE3D	3.10.20.30		coord: 57..154 e-value: 2.9E-34 score: 118.8
IPR001041	2Fe-2S ferredoxin-type iron-sulfur binding domain	PFAM	PF00111	Fer2	coord: 66..140 e-value: 1.1E-21 score: 76.5
IPR001041	2Fe-2S ferredoxin-type iron-sulfur binding domain	PROSITE	PS51085	2FE2S_FER_2	coord: 60..151 score: 12.723645
IPR001041	2Fe-2S ferredoxin-type iron-sulfur binding domain	CDD	cd00207	fer2	coord: 65..146 e-value: 3.35905E-32 score: 108.251
IPR010241	Ferredoxin [2Fe-2S], plant	TIGRFAM	TIGR02008	TIGR02008	coord: 58..153 e-value: 4.7E-46 score: 152.5
None	No IPR available	PANTHER	PTHR43112:SF30	FERREDOXIN-3, CHLOROPLASTIC	coord: 4..153
None	No IPR available	PANTHER	PTHR43112	FERREDOXIN	coord: 4..153
IPR006058	2Fe-2S ferredoxin, iron-sulphur binding site	PROSITE	PS00197	2FE2S_FER_1	coord: 97..105
IPR036010	2Fe-2S ferredoxin-like superfamily	SUPERFAMILY	54292	2Fe-2S ferredoxin-like	coord: 51..151

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
MC03g0421.1	MC03g0421.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0022900	electron transport chain
cellular_component	GO:0009507	chloroplast
molecular_function	GO:0051537	2 iron, 2 sulfur cluster binding
molecular_function	GO:0009055	electron transfer activity
molecular_function	GO:0046872	metal ion binding
molecular_function	GO:0051536	iron-sulfur cluster binding