MC03g0409 (gene) Bitter gourd (Dali-11) v1

Overview


Name	MC03g0409
Type	gene
Organism	Momordica charantia cv. Dali-11 (Bitter gourd (Dali-11) v1)
Description	RAB6-interacting golgin
Location	MC03: 10937919 .. 10939503 (-)
RNA-Seq Expression	MC03g0409
Synteny	MC03g0409

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGACGACGCAGAAACAGAGCTGGGAGGCGCAGGCGCAACAATCGCAGATGCAGCGAGTGAGGAACTCGGGCATGATAAGCCATGTGAATGCGATTGGGAGTCCGTTGAAGGAGGATCAAGACGAGGAGCTTTCGCGATCGGCGTTCGCTCTGTTCCGCGCCAAGGAAGAGGAGATCGAGAGGAAGAAGATGGAGATGAGAGACAAGGTGGAGGCACGCCTTGGAAGAGCCGAGGAAGCCACCAAGCGATTGGCGGAGATTCGCGAAGTAAGATTCAATGCTACATTGCATCGATCATCGTTCATCGTTTAGGGTTTCTGGATTTGAACTGATGAAGGAAAATGGAATGAAATTACAGGAACTTGAAGCTATGGCGGATCCAATGAGGAAGGAAGTATCGTTCATCCGGAAGAAGATTGATTTGGTGAACAAAGAGTTGAAGCCATTGGGACTCACCTGCCAAAAGAAGGTCTCAAATTCAAACTCCATCCCCAAAAATCAAATCAAATTCTCAAACTTTTCTCAGTTTCTTCTCAAAATATTTCTAAATTACTACTGCACACAACTACTTGCATGCAACTTTTGCTAATATATATATTCAAATTTCAAAATTATTCACCTTGGTATGAGCTTTCAAATTGTCCAATAGACATACTTGAGAAAGTTCGATAAGTTGAGCTATCTTCAACTAGTAACACTATATTTCCAATTAAAATGTCGGGGTTCGAATTCTCACATGTTGTTAAATTAAAAGAAAAGATATATCGATAACAAACATTCAAATGTTAGAATGGTTTTTTAGAGAGCGAAACACCTATCTCTGACTAAAAAATAAAAAATAAAGACTTTAAATCTTTTAGTTAAAATAAAATGTACTTAAAATTTTATAAATTACAATAAAATTTCGACCTTGTTATCAATATTTATCTATATTGGGACTCGATAAATAGAATAAGACTGTTAAATTACAAGTTTGGTTTATGAATTTTCAATGTTGTGTTAATATGTTTTTGAGGAGTATCTAATAAGTTTCTTAACTTTAAATTTTGTGTCTTATATAGATAATTACTTATTATAATTTAGAGATCTATAAGATACAAAATTGATATATAAATTTTTTATATATGAACTTTAAATTTTGTGTTTAATAGATTCTTAAATTTAAAAATATTTAGTAGATTTCATTACACAATAAATAATAAATAAAAAAGTTAGAGATGTATTTGACATTTTTCAAAGTTTATTGACATATTAGACAAATAAAATATAAAGTTTAGAAATTTGTAGAACAAAGCTCTAAAACTAAACATACATGTGCAAAAAATTATCTCTATTTTTTGTATATTAATGGGATATCATTTTTTTTTCTTCTTCTTTTTAATCTCTATATATAGCTTACCATATGGGGAGCATGGTGCATAACTAAATTTATTTTTGTTTTTTTTAATTTAAGTTGAGATTACTTTATGCATTACTAAGAATTTGATTTATTGGTTTGTAGGAGAGGGAATACAAAGAAGTGCTAGAGTTATTCAATGAGAAGAACAGAGAGAAATCTCAATTGGTAGCCAAACTTATGGAGGTG

mRNA sequence

ATGACGACGCAGAAACAGAGCTGGGAGGCGCAGGCGCAACAATCGCAGATGCAGCGAGTGAGGAACTCGGGCATGATAAGCCATGTGAATGCGATTGGGAGTCCGTTGAAGGAGGATCAAGACGAGGAGCTTTCGCGATCGGCGTTCGCTCTGTTCCGCGCCAAGGAAGAGGAGATCGAGAGGAAGAAGATGGAGATGAGAGACAAGGTGGAGGCACGCCTTGGAAGAGCCGAGGAAGCCACCAAGCGATTGGCGGAGATTCGCGAAGAACTTGAAGCTATGGCGGATCCAATGAGGAAGGAAGTATCGTTCATCCGGAAGAAGATTGATTTGGTGAACAAAGAGTTGAAGCCATTGGGACTCACCTGCCAAAAGAAGGAGAGGGAATACAAAGAAGTGCTAGAGTTATTCAATGAGAAGAACAGAGAGAAATCTCAATTGGTAGCCAAACTTATGGAGGTG

Coding sequence (CDS)

ATGACGACGCAGAAACAGAGCTGGGAGGCGCAGGCGCAACAATCGCAGATGCAGCGAGTGAGGAACTCGGGCATGATAAGCCATGTGAATGCGATTGGGAGTCCGTTGAAGGAGGATCAAGACGAGGAGCTTTCGCGATCGGCGTTCGCTCTGTTCCGCGCCAAGGAAGAGGAGATCGAGAGGAAGAAGATGGAGATGAGAGACAAGGTGGAGGCACGCCTTGGAAGAGCCGAGGAAGCCACCAAGCGATTGGCGGAGATTCGCGAAGAACTTGAAGCTATGGCGGATCCAATGAGGAAGGAAGTATCGTTCATCCGGAAGAAGATTGATTTGGTGAACAAAGAGTTGAAGCCATTGGGACTCACCTGCCAAAAGAAGGAGAGGGAATACAAAGAAGTGCTAGAGTTATTCAATGAGAAGAACAGAGAGAAATCTCAATTGGTAGCCAAACTTATGGAGGTG

Protein sequence

MTTQKQSWEAQAQQSQMQRVRNSGMISHVNAIGSPLKEDQDEELSRSAFALFRAKEEEIERKKMEMRDKVEARLGRAEEATKRLAEIREELEAMADPMRKEVSFIRKKIDLVNKELKPLGLTCQKKEREYKEVLELFNEKNREKSQLVAKLMEV

Homology

[Close]

BLAST of MC03g0409 vs. NCBI nr
Match: XP_022142637.1 (uncharacterized protein LOC111012700 [Momordica charantia])

HSP 1 Score: 276 bits (707), Expect = 7.68e-93
Identity = 153/154 (99.35%), Postives = 154/154 (100.00%), Query Frame = 0


Query: 1   MTTQKQSWEAQAQQSQMQRVRNSGMISHVNAIGSPLKEDQDEELSRSAFALFRAKEEEIE 60
           MTTQKQSWEAQAQQSQMQRVRNSGMISHVNAIGSPLKEDQDEELSRSAFALFRAKEEEIE
Sbjct: 1   MTTQKQSWEAQAQQSQMQRVRNSGMISHVNAIGSPLKEDQDEELSRSAFALFRAKEEEIE 60

Query: 61  RKKMEMRDKVEARLGRAEEATKRLAEIREELEAMADPMRKEVSFIRKKIDLVNKELKPLG 120
           RKKMEMRDKVEARLGRAEEATKRLAEIREELEAMADPMRKEVSFIRKKIDLVNKELKPLG
Sbjct: 61  RKKMEMRDKVEARLGRAEEATKRLAEIREELEAMADPMRKEVSFIRKKIDLVNKELKPLG 120

Query: 121 LTCQKKEREYKEVLELFNEKNREKSQLVAKLMEV 154
           LTCQKKEREYKEVLELFNEKNREKSQLVAKLME+
Sbjct: 121 LTCQKKEREYKEVLELFNEKNREKSQLVAKLMEL 154

[Close]

BLAST of MC03g0409 vs. NCBI nr
Match: XP_008461743.1 (PREDICTED: probable DNA double-strand break repair Rad50 ATPase [Cucumis melo] >KAA0040914.1 putative DNA double-strand break repair Rad50 ATPase [Cucumis melo var. makuwa] >TYK10622.1 putative DNA double-strand break repair Rad50 ATPase [Cucumis melo var. makuwa])

HSP 1 Score: 239 bits (610), Expect = 4.31e-78
Identity = 137/156 (87.82%), Postives = 144/156 (92.31%), Query Frame = 0


Query: 1   MTTQKQSWEAQAQQSQMQRVRNSGMISHV--NAIGSPLKEDQDEELSRSAFALFRAKEEE 60
           MTTQKQSWEAQ    QMQRV+NSGMIS    N IGSPLKEDQ+EE+SRSA ALFRAKEEE
Sbjct: 1   MTTQKQSWEAQ----QMQRVKNSGMISSNVNNGIGSPLKEDQEEEISRSALALFRAKEEE 60

Query: 61  IERKKMEMRDKVEARLGRAEEATKRLAEIREELEAMADPMRKEVSFIRKKIDLVNKELKP 120
           IERKKMEMR+KVEARLGRAEEATKRLAEIREELE M DPMRKEVSFIRKKIDLVNKELKP
Sbjct: 61  IERKKMEMREKVEARLGRAEEATKRLAEIREELEGMTDPMRKEVSFIRKKIDLVNKELKP 120

Query: 121 LGLTCQKKEREYKEVLELFNEKNREKSQLVAKLMEV 154
           LGLTCQKKEREYKEVL+LFNEKNREKSQLV+KLME+
Sbjct: 121 LGLTCQKKEREYKEVLDLFNEKNREKSQLVSKLMEL 152

[Close]

BLAST of MC03g0409 vs. NCBI nr
Match: XP_038893849.1 (uncharacterized protein LOC120082661 [Benincasa hispida])

HSP 1 Score: 239 bits (610), Expect = 4.76e-78
Identity = 135/156 (86.54%), Postives = 147/156 (94.23%), Query Frame = 0


Query: 1   MTTQKQSWEAQAQQSQMQRVRNSGMI--SHVNAIGSPLKEDQDEELSRSAFALFRAKEEE 60
           MTT KQSWEAQ Q  QMQRV+NSG++  S+VNAIGSP+KEDQ+EE+SRSA A+FRAKEEE
Sbjct: 1   MTTPKQSWEAQ-QSQQMQRVKNSGVMISSNVNAIGSPVKEDQEEEISRSALAVFRAKEEE 60

Query: 61  IERKKMEMRDKVEARLGRAEEATKRLAEIREELEAMADPMRKEVSFIRKKIDLVNKELKP 120
           IERKKMEMR+KVEARLGRAEEATKRLAEIREELE M DPMRKEVSFIRKKIDLVNKELKP
Sbjct: 61  IERKKMEMREKVEARLGRAEEATKRLAEIREELEGMTDPMRKEVSFIRKKIDLVNKELKP 120

Query: 121 LGLTCQKKEREYKEVLELFNEKNREKSQLVAKLMEV 154
           LGLTCQKKEREYKEVL+LFNEKN+EKSQLVAKLME+
Sbjct: 121 LGLTCQKKEREYKEVLDLFNEKNKEKSQLVAKLMEL 155

[Close]

BLAST of MC03g0409 vs. NCBI nr
Match: XP_004139478.1 (uncharacterized protein LOC101203874 [Cucumis sativus] >KGN64906.1 hypothetical protein Csa_022823 [Cucumis sativus])

HSP 1 Score: 236 bits (603), Expect = 5.18e-77
Identity = 137/157 (87.26%), Postives = 146/157 (92.99%), Query Frame = 0


Query: 1   MTTQKQSWEAQAQQSQMQRVRNSGMIS-HVN--AIGSPLKEDQDEELSRSAFALFRAKEE 60
           MTTQKQSWEAQ    QMQRV+NSGMIS +VN   IGSPLKEDQ+EE+SRSA ALFRAKEE
Sbjct: 1   MTTQKQSWEAQ----QMQRVKNSGMISSNVNNGIIGSPLKEDQEEEISRSALALFRAKEE 60

Query: 61  EIERKKMEMRDKVEARLGRAEEATKRLAEIREELEAMADPMRKEVSFIRKKIDLVNKELK 120
           EIERKKMEMR+KVEARLGRAEEATKRLAEIREELE M DPMRKEVSFIRKKIDLVNKELK
Sbjct: 61  EIERKKMEMREKVEARLGRAEEATKRLAEIREELEGMTDPMRKEVSFIRKKIDLVNKELK 120

Query: 121 PLGLTCQKKEREYKEVLELFNEKNREKSQLVAKLMEV 154
           PLGLTCQKKEREYKEVL+LFNEKN+EKSQLV+KLME+
Sbjct: 121 PLGLTCQKKEREYKEVLDLFNEKNKEKSQLVSKLMEL 153

[Close]

BLAST of MC03g0409 vs. NCBI nr
Match: XP_022970344.1 (uncharacterized protein LOC111469338 [Cucurbita maxima])

HSP 1 Score: 217 bits (552), Expect = 2.31e-69
Identity = 127/154 (82.47%), Postives = 134/154 (87.01%), Query Frame = 0


Query: 1   MTTQKQSWEAQAQQSQMQRVRNSGMISHVNAIGSPLKEDQDEELSRSAFALFRAKEEEIE 60
           MTTQKQSWEAQ  Q Q QRV+         AIGSP +EDQ+EELSRSA ALFRAKEEEIE
Sbjct: 1   MTTQKQSWEAQQSQMQ-QRVKK--------AIGSPAREDQEEELSRSALALFRAKEEEIE 60

Query: 61  RKKMEMRDKVEARLGRAEEATKRLAEIREELEAMADPMRKEVSFIRKKIDLVNKELKPLG 120
           RKKMEMR+KVE RLGRAEEATKRLAEIREELE M DPMRKEVS IRKKIDLVNKELKPLG
Sbjct: 61  RKKMEMREKVENRLGRAEEATKRLAEIREELEGMTDPMRKEVSLIRKKIDLVNKELKPLG 120

Query: 121 LTCQKKEREYKEVLELFNEKNREKSQLVAKLMEV 154
           +TCQKKEREYKEVLEL NEKN+EKSQLVAKLME+
Sbjct: 121 ITCQKKEREYKEVLELLNEKNKEKSQLVAKLMEL 145

[Close]

BLAST of MC03g0409 vs. ExPASy TrEMBL
Match: A0A6J1CNF1 (RAB6-interacting golgin OS=Momordica charantia OX=3673 GN=LOC111012700 PE=3 SV=1)

HSP 1 Score: 276 bits (707), Expect = 3.72e-93
Identity = 153/154 (99.35%), Postives = 154/154 (100.00%), Query Frame = 0


Query: 1   MTTQKQSWEAQAQQSQMQRVRNSGMISHVNAIGSPLKEDQDEELSRSAFALFRAKEEEIE 60
           MTTQKQSWEAQAQQSQMQRVRNSGMISHVNAIGSPLKEDQDEELSRSAFALFRAKEEEIE
Sbjct: 1   MTTQKQSWEAQAQQSQMQRVRNSGMISHVNAIGSPLKEDQDEELSRSAFALFRAKEEEIE 60

Query: 61  RKKMEMRDKVEARLGRAEEATKRLAEIREELEAMADPMRKEVSFIRKKIDLVNKELKPLG 120
           RKKMEMRDKVEARLGRAEEATKRLAEIREELEAMADPMRKEVSFIRKKIDLVNKELKPLG
Sbjct: 61  RKKMEMRDKVEARLGRAEEATKRLAEIREELEAMADPMRKEVSFIRKKIDLVNKELKPLG 120

Query: 121 LTCQKKEREYKEVLELFNEKNREKSQLVAKLMEV 154
           LTCQKKEREYKEVLELFNEKNREKSQLVAKLME+
Sbjct: 121 LTCQKKEREYKEVLELFNEKNREKSQLVAKLMEL 154

[Close]

BLAST of MC03g0409 vs. ExPASy TrEMBL
Match: A0A5D3CH78 (RAB6-interacting golgin OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold315G001010 PE=3 SV=1)

HSP 1 Score: 239 bits (610), Expect = 2.08e-78
Identity = 137/156 (87.82%), Postives = 144/156 (92.31%), Query Frame = 0


Query: 1   MTTQKQSWEAQAQQSQMQRVRNSGMISHV--NAIGSPLKEDQDEELSRSAFALFRAKEEE 60
           MTTQKQSWEAQ    QMQRV+NSGMIS    N IGSPLKEDQ+EE+SRSA ALFRAKEEE
Sbjct: 1   MTTQKQSWEAQ----QMQRVKNSGMISSNVNNGIGSPLKEDQEEEISRSALALFRAKEEE 60

Query: 61  IERKKMEMRDKVEARLGRAEEATKRLAEIREELEAMADPMRKEVSFIRKKIDLVNKELKP 120
           IERKKMEMR+KVEARLGRAEEATKRLAEIREELE M DPMRKEVSFIRKKIDLVNKELKP
Sbjct: 61  IERKKMEMREKVEARLGRAEEATKRLAEIREELEGMTDPMRKEVSFIRKKIDLVNKELKP 120

Query: 121 LGLTCQKKEREYKEVLELFNEKNREKSQLVAKLMEV 154
           LGLTCQKKEREYKEVL+LFNEKNREKSQLV+KLME+
Sbjct: 121 LGLTCQKKEREYKEVLDLFNEKNREKSQLVSKLMEL 152

[Close]

BLAST of MC03g0409 vs. ExPASy TrEMBL
Match: A0A1S3CFV6 (RAB6-interacting golgin OS=Cucumis melo OX=3656 GN=LOC103500274 PE=3 SV=1)

HSP 1 Score: 239 bits (610), Expect = 2.08e-78
Identity = 137/156 (87.82%), Postives = 144/156 (92.31%), Query Frame = 0


Query: 1   MTTQKQSWEAQAQQSQMQRVRNSGMISHV--NAIGSPLKEDQDEELSRSAFALFRAKEEE 60
           MTTQKQSWEAQ    QMQRV+NSGMIS    N IGSPLKEDQ+EE+SRSA ALFRAKEEE
Sbjct: 1   MTTQKQSWEAQ----QMQRVKNSGMISSNVNNGIGSPLKEDQEEEISRSALALFRAKEEE 60

Query: 61  IERKKMEMRDKVEARLGRAEEATKRLAEIREELEAMADPMRKEVSFIRKKIDLVNKELKP 120
           IERKKMEMR+KVEARLGRAEEATKRLAEIREELE M DPMRKEVSFIRKKIDLVNKELKP
Sbjct: 61  IERKKMEMREKVEARLGRAEEATKRLAEIREELEGMTDPMRKEVSFIRKKIDLVNKELKP 120

Query: 121 LGLTCQKKEREYKEVLELFNEKNREKSQLVAKLMEV 154
           LGLTCQKKEREYKEVL+LFNEKNREKSQLV+KLME+
Sbjct: 121 LGLTCQKKEREYKEVLDLFNEKNREKSQLVSKLMEL 152

[Close]

BLAST of MC03g0409 vs. ExPASy TrEMBL
Match: A0A0A0LY59 (RAB6-interacting golgin OS=Cucumis sativus OX=3659 GN=Csa_1G153510 PE=3 SV=1)

HSP 1 Score: 236 bits (603), Expect = 2.51e-77
Identity = 137/157 (87.26%), Postives = 146/157 (92.99%), Query Frame = 0


Query: 1   MTTQKQSWEAQAQQSQMQRVRNSGMIS-HVN--AIGSPLKEDQDEELSRSAFALFRAKEE 60
           MTTQKQSWEAQ    QMQRV+NSGMIS +VN   IGSPLKEDQ+EE+SRSA ALFRAKEE
Sbjct: 1   MTTQKQSWEAQ----QMQRVKNSGMISSNVNNGIIGSPLKEDQEEEISRSALALFRAKEE 60

Query: 61  EIERKKMEMRDKVEARLGRAEEATKRLAEIREELEAMADPMRKEVSFIRKKIDLVNKELK 120
           EIERKKMEMR+KVEARLGRAEEATKRLAEIREELE M DPMRKEVSFIRKKIDLVNKELK
Sbjct: 61  EIERKKMEMREKVEARLGRAEEATKRLAEIREELEGMTDPMRKEVSFIRKKIDLVNKELK 120

Query: 121 PLGLTCQKKEREYKEVLELFNEKNREKSQLVAKLMEV 154
           PLGLTCQKKEREYKEVL+LFNEKN+EKSQLV+KLME+
Sbjct: 121 PLGLTCQKKEREYKEVLDLFNEKNKEKSQLVSKLMEL 153

[Close]

BLAST of MC03g0409 vs. ExPASy TrEMBL
Match: A0A6J1I589 (RAB6-interacting golgin OS=Cucurbita maxima OX=3661 GN=LOC111469338 PE=3 SV=1)

HSP 1 Score: 217 bits (552), Expect = 1.12e-69
Identity = 127/154 (82.47%), Postives = 134/154 (87.01%), Query Frame = 0


Query: 1   MTTQKQSWEAQAQQSQMQRVRNSGMISHVNAIGSPLKEDQDEELSRSAFALFRAKEEEIE 60
           MTTQKQSWEAQ  Q Q QRV+         AIGSP +EDQ+EELSRSA ALFRAKEEEIE
Sbjct: 1   MTTQKQSWEAQQSQMQ-QRVKK--------AIGSPAREDQEEELSRSALALFRAKEEEIE 60

Query: 61  RKKMEMRDKVEARLGRAEEATKRLAEIREELEAMADPMRKEVSFIRKKIDLVNKELKPLG 120
           RKKMEMR+KVE RLGRAEEATKRLAEIREELE M DPMRKEVS IRKKIDLVNKELKPLG
Sbjct: 61  RKKMEMREKVENRLGRAEEATKRLAEIREELEGMTDPMRKEVSLIRKKIDLVNKELKPLG 120

Query: 121 LTCQKKEREYKEVLELFNEKNREKSQLVAKLMEV 154
           +TCQKKEREYKEVLEL NEKN+EKSQLVAKLME+
Sbjct: 121 ITCQKKEREYKEVLELLNEKNKEKSQLVAKLMEL 145

[Close]

BLAST of MC03g0409 vs. TAIR 10
Match: AT2G27740.1 (Family of unknown function (DUF662) )

HSP 1 Score: 166.8 bits (421), Expect = 1.4e-41
Identity = 93/154 (60.39%), Postives = 128/154 (83.12%), Query Frame = 0


Query: 1   MTTQKQSWEAQAQQSQMQRVRNSGMISHVNAIGSPLKEDQDEELSRSAFALFRAKEEEIE 60
           M T +Q  E Q Q   +QR+++SG IS     GSP+ ++++EELS+SAFALF+AKE+EIE
Sbjct: 1   MATTRQILE-QPQSPFIQRIKSSGNIS---MNGSPMIDEKEEELSQSAFALFKAKEDEIE 60

Query: 61  RKKMEMRDKVEARLGRAEEATKRLAEIREELEAMADPMRKEVSFIRKKIDLVNKELKPLG 120
           R+KME++D+V+ +LG AEEAT+RLAEIREELEA+ DPMRKE+S IRK++D +N+ELKPLG
Sbjct: 61  RRKMEVKDRVQKKLGLAEEATRRLAEIREELEALTDPMRKEISAIRKRVDAINRELKPLG 120

Query: 121 LTCQKKEREYKEVLELFNEKNREKSQLVAKLMEV 155
            +CQ+KERE+KE LE +NEKN+EK+  V+KL+E+
Sbjct: 121 QSCQRKEREFKEALEAYNEKNKEKAIFVSKLVEL 150

[Close]

BLAST of MC03g0409 vs. TAIR 10
Match: AT3G52920.1 (Family of unknown function (DUF662) )

HSP 1 Score: 157.9 bits (398), Expect = 6.5e-39
Identity = 83/115 (72.17%), Postives = 102/115 (88.70%), Query Frame = 0


Query: 40  QDEELSRSAFALFRAKEEEIERKKMEMRDKVEARLGRAEEATKRLAEIREELEAMADPMR 99
           +DEE++RSA + FRAKE+EIE++KME+R++V+A+LGR EE T+RLA IREELE MADPMR
Sbjct: 27  EDEEMARSALSAFRAKEDEIEKRKMEVRERVKAQLGRVEEETRRLASIREELETMADPMR 86

Query: 100 KEVSFIRKKIDLVNKELKPLGLTCQKKEREYKEVLELFNEKNREKSQLVAKLMEV 155
           KEV+++RKKID VNKELKPLG T QKKEREYKE L+ FNEKNREK QL+ KLME+
Sbjct: 87  KEVNWVRKKIDSVNKELKPLGSTVQKKEREYKEALDTFNEKNREKVQLITKLMEM 141

[Close]

BLAST of MC03g0409 vs. TAIR 10
Match: AT3G52920.2 (Family of unknown function (DUF662) )

HSP 1 Score: 157.9 bits (398), Expect = 6.5e-39
Identity = 83/115 (72.17%), Postives = 102/115 (88.70%), Query Frame = 0


Query: 40  QDEELSRSAFALFRAKEEEIERKKMEMRDKVEARLGRAEEATKRLAEIREELEAMADPMR 99
           +DEE++RSA + FRAKE+EIE++KME+R++V+A+LGR EE T+RLA IREELE MADPMR
Sbjct: 27  EDEEMARSALSAFRAKEDEIEKRKMEVRERVKAQLGRVEEETRRLASIREELETMADPMR 86

Query: 100 KEVSFIRKKIDLVNKELKPLGLTCQKKEREYKEVLELFNEKNREKSQLVAKLMEV 155
           KEV+++RKKID VNKELKPLG T QKKEREYKE L+ FNEKNREK QL+ KLME+
Sbjct: 87  KEVNWVRKKIDSVNKELKPLGSTVQKKEREYKEALDTFNEKNREKVQLITKLMEL 141

[Close]

BLAST of MC03g0409 vs. TAIR 10
Match: AT2G36410.2 (Family of unknown function (DUF662) )

HSP 1 Score: 157.5 bits (397), Expect = 8.4e-39
Identity = 86/147 (58.50%), Postives = 116/147 (78.91%), Query Frame = 0


Query: 9   EAQAQQSQMQRVRNSGMISHVNAIG-SPLKEDQDEELSRSAFALFRAKEEEIERKKMEMR 68
           + Q+Q     + +++ M+ H  ++  S     +DEE++RSA + FRAKE+EIE+++ME+R
Sbjct: 24  QPQSQPQPQPQQQSNEMVLHTGSLSFSSHMSREDEEMTRSALSAFRAKEDEIEKRRMEVR 83

Query: 69  DKVEARLGRAEEATKRLAEIREELEAMADPMRKEVSFIRKKIDLVNKELKPLGLTCQKKE 128
           ++++A+LGR E+ TKRL+ IREELE+MADPMRKEVS +RKKID VNKELKPLG T QKKE
Sbjct: 84  ERIQAQLGRVEQETKRLSTIREELESMADPMRKEVSVVRKKIDSVNKELKPLGSTVQKKE 143

Query: 129 REYKEVLELFNEKNREKSQLVAKLMEV 155
           REYKE L+ FNEKNREK QL+ KLME+
Sbjct: 144 REYKEALDTFNEKNREKVQLITKLMEL 170

[Close]

BLAST of MC03g0409 vs. TAIR 10
Match: AT2G36410.1 (Family of unknown function (DUF662) )

HSP 1 Score: 157.5 bits (397), Expect = 8.4e-39
Identity = 86/147 (58.50%), Postives = 116/147 (78.91%), Query Frame = 0


Query: 9   EAQAQQSQMQRVRNSGMISHVNAIG-SPLKEDQDEELSRSAFALFRAKEEEIERKKMEMR 68
           + Q+Q     + +++ M+ H  ++  S     +DEE++RSA + FRAKE+EIE+++ME+R
Sbjct: 24  QPQSQPQPQPQQQSNEMVLHTGSLSFSSHMSREDEEMTRSALSAFRAKEDEIEKRRMEVR 83

Query: 69  DKVEARLGRAEEATKRLAEIREELEAMADPMRKEVSFIRKKIDLVNKELKPLGLTCQKKE 128
           ++++A+LGR E+ TKRL+ IREELE+MADPMRKEVS +RKKID VNKELKPLG T QKKE
Sbjct: 84  ERIQAQLGRVEQETKRLSTIREELESMADPMRKEVSVVRKKIDSVNKELKPLGSTVQKKE 143

Query: 129 REYKEVLELFNEKNREKSQLVAKLMEV 155
           REYKE L+ FNEKNREK QL+ KLME+
Sbjct: 144 REYKEALDTFNEKNREKVQLITKLMEM 170

The following BLAST results are available for this feature:

BLAST of MC03g0409 vs.


Match Name	E-value	Identity	Description

BLAST of MC03g0409 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022142637.1	7.68e-93	99.35	uncharacterized protein LOC111012700 [Momordica charantia]	[more]
XP_008461743.1	4.31e-78	87.82	PREDICTED: probable DNA double-strand break repair Rad50 ATPase [Cucumis melo] >...	[more]
XP_038893849.1	4.76e-78	86.54	uncharacterized protein LOC120082661 [Benincasa hispida]	[more]
XP_004139478.1	5.18e-77	87.26	uncharacterized protein LOC101203874 [Cucumis sativus] >KGN64906.1 hypothetical ...	[more]
XP_022970344.1	2.31e-69	82.47	uncharacterized protein LOC111469338 [Cucurbita maxima]	[more]

BLAST of MC03g0409 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1CNF1	3.72e-93	99.35	RAB6-interacting golgin OS=Momordica charantia OX=3673 GN=LOC111012700 PE=3 SV=1	[more]
A0A5D3CH78	2.08e-78	87.82	RAB6-interacting golgin OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold...	[more]
A0A1S3CFV6	2.08e-78	87.82	RAB6-interacting golgin OS=Cucumis melo OX=3656 GN=LOC103500274 PE=3 SV=1	[more]
A0A0A0LY59	2.51e-77	87.26	RAB6-interacting golgin OS=Cucumis sativus OX=3659 GN=Csa_1G153510 PE=3 SV=1	[more]
A0A6J1I589	1.12e-69	82.47	RAB6-interacting golgin OS=Cucurbita maxima OX=3661 GN=LOC111469338 PE=3 SV=1	[more]

BLAST of MC03g0409 vs. TAIR 10


Match Name	E-value	Identity	Description
AT2G27740.1	1.4e-41	60.39	Family of unknown function (DUF662)	[more]
AT3G52920.1	6.5e-39	72.17	Family of unknown function (DUF662)	[more]
AT3G52920.2	6.5e-39	72.17	Family of unknown function (DUF662)	[more]
AT2G36410.2	8.4e-39	58.50	Family of unknown function (DUF662)	[more]
AT2G36410.1	8.4e-39	58.50	Family of unknown function (DUF662)	[more]

InterPro

Analysis Name: InterPro Annotations of Bitter gourd (Dali-11) v1
Date Performed: 2021-10-25

Position :

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IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	COILS	Coil	Coil	coord: 123..143
None	No IPR available	COILS	Coil	Coil	coord: 70..94
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..20
None	No IPR available	PANTHER	PTHR21470:SF8	EXPRESSED PROTEIN	coord: 39..153
IPR007033	RAB6-interacting golgin	PFAM	PF04949	Transcrip_act	coord: 23..154 e-value: 2.8E-59 score: 199.4
IPR007033	RAB6-interacting golgin	PANTHER	PTHR21470	RAB6-INTERACTING PROTEIN GORAB	coord: 39..153

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
MC03g0409.1	MC03g0409.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
cellular_component	GO:0005794	Golgi apparatus