MC03g0379 (gene) Bitter gourd (Dali-11) v1

Overview
NameMC03g0379
Typegene
OrganismMomordica charantia cv. Dali-11 (Bitter gourd (Dali-11) v1)
DescriptionCyclin-dependent kinases regulatory subunit
LocationMC03: 10540464 .. 10540982 (-)
RNA-Seq ExpressionMC03g0379
SyntenyMC03g0379
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGGCCAGATCCAGTACTCCGAAAAGTATTTCGACGATACCTATGAATACAGGTCTGTAATTTCTCATCCTCATCCGTTTTCCGATTCTCTGGCTTTTTCCGTCGGTATGGTTGATTTTGATGGTTTCTGTTTATGTCTGTGTAGGCATGTGGTGCTTCCCCCGGAAGTCGCTAAACTTCTCCCCAAGAATCGCCTTCTTTCCGAAGTAAGTACTAGTTCATGATTCTCCTGCGAAATCCAAGCCGAAACCCTAGCGGTTCCTTGATTTGATCATTTTCTTTAATCATGGACTGTTTTTTCTCCGATTGATTGTGATGATCTCTACGGTTTGAATTCTGCGTAATTTGATGATTTGCCTGACGATGAGCAGAACGAATGGCGGGCGATCGGGGTTCAGCAGAGCCGGGGATGGGTCCACTACGCAATCCATCGCCCAGAGCCGCACATTATGCTGTTCAGGAGGCCACTCAACTATCAGCAGCAGCAGGAGAATCAAGCGCAGCAGATTATGGCCAAG

mRNA sequence

ATGGGCCAGATCCAGTACTCCGAAAAGTATTTCGACGATACCTATGAATACAGGCATGTGGTGCTTCCCCCGGAAGTCGCTAAACTTCTCCCCAAGAATCGCCTTCTTTCCGAAAACGAATGGCGGGCGATCGGGGTTCAGCAGAGCCGGGGATGGGTCCACTACGCAATCCATCGCCCAGAGCCGCACATTATGCTGTTCAGGAGGCCACTCAACTATCAGCAGCAGCAGGAGAATCAAGCGCAGCAGATTATGGCCAAG

Coding sequence (CDS)

ATGGGCCAGATCCAGTACTCCGAAAAGTATTTCGACGATACCTATGAATACAGGCATGTGGTGCTTCCCCCGGAAGTCGCTAAACTTCTCCCCAAGAATCGCCTTCTTTCCGAAAACGAATGGCGGGCGATCGGGGTTCAGCAGAGCCGGGGATGGGTCCACTACGCAATCCATCGCCCAGAGCCGCACATTATGCTGTTCAGGAGGCCACTCAACTATCAGCAGCAGCAGGAGAATCAAGCGCAGCAGATTATGGCCAAG

Protein sequence

MGQIQYSEKYFDDTYEYRHVVLPPEVAKLLPKNRLLSENEWRAIGVQQSRGWVHYAIHRPEPHIMLFRRPLNYQQQQENQAQQIMAK
Homology
[Close]
BLAST of MC03g0379 vs. ExPASy Swiss-Prot
Match: O23249 (Cyclin-dependent kinases regulatory subunit 1 OS=Arabidopsis thaliana OX=3702 GN=CKS1 PE=1 SV=1)

HSP 1 Score: 175.6 bits (444), Expect = 2.4e-43
Identity = 81/87 (93.10%), Postives = 85/87 (97.70%), Query Frame = 0 

Query: 1  MGQIQYSEKYFDDTYEYRHVVLPPEVAKLLPKNRLLSENEWRAIGVQQSRGWVHYAIHRP 60
          MGQIQYSEKYFDDT+EYRHVVLPPEVAKLLPKNRLLSENEWRAIGVQQSRGWVHYA+HRP
Sbjct: 1  MGQIQYSEKYFDDTFEYRHVVLPPEVAKLLPKNRLLSENEWRAIGVQQSRGWVHYAVHRP 60

Query: 61 EPHIMLFRRPLNYQQQQENQAQQIMAK 88
          EPHIMLFRRPLNYQQQQENQAQ ++ K
Sbjct: 61 EPHIMLFRRPLNYQQQQENQAQNMLVK 87

[Close]
BLAST of MC03g0379 vs. ExPASy Swiss-Prot
Match: A2XCH8 (Cyclin-dependent kinases regulatory subunit 1 OS=Oryza sativa subsp. indica OX=39946 GN=CKS1 PE=2 SV=1)

HSP 1 Score: 166.8 bits (421), Expect = 1.1e-40
Identity = 78/81 (96.30%), Postives = 79/81 (97.53%), Query Frame = 0 

Query: 1  MGQIQYSEKYFDDTYEYRHVVLPPEVAKLLPKNRLLSENEWRAIGVQQSRGWVHYAIHRP 60
          MGQIQYSEKYFDDTYEYRHVVLPPEVAKLLPKNRLLSENEWRAIGVQQSRGWVHYAIHRP
Sbjct: 1  MGQIQYSEKYFDDTYEYRHVVLPPEVAKLLPKNRLLSENEWRAIGVQQSRGWVHYAIHRP 60

Query: 61 EPHIMLFRRPLNYQQQQENQA 82
          EPHIMLFRRPLN+QQQQE  A
Sbjct: 61 EPHIMLFRRPLNFQQQQEAAA 81

[Close]
BLAST of MC03g0379 vs. ExPASy Swiss-Prot
Match: Q6PS57 (Cyclin-dependent kinases regulatory subunit 1 OS=Oryza sativa subsp. japonica OX=39947 GN=CKS1 PE=2 SV=1)

HSP 1 Score: 166.8 bits (421), Expect = 1.1e-40
Identity = 78/81 (96.30%), Postives = 79/81 (97.53%), Query Frame = 0 

Query: 1  MGQIQYSEKYFDDTYEYRHVVLPPEVAKLLPKNRLLSENEWRAIGVQQSRGWVHYAIHRP 60
          MGQIQYSEKYFDDTYEYRHVVLPPEVAKLLPKNRLLSENEWRAIGVQQSRGWVHYAIHRP
Sbjct: 1  MGQIQYSEKYFDDTYEYRHVVLPPEVAKLLPKNRLLSENEWRAIGVQQSRGWVHYAIHRP 60

Query: 61 EPHIMLFRRPLNYQQQQENQA 82
          EPHIMLFRRPLN+QQQQE  A
Sbjct: 61 EPHIMLFRRPLNFQQQQEAAA 81

[Close]
BLAST of MC03g0379 vs. ExPASy Swiss-Prot
Match: Q9SJJ5 (Cyclin-dependent kinases regulatory subunit 2 OS=Arabidopsis thaliana OX=3702 GN=CKS2 PE=1 SV=1)

HSP 1 Score: 159.5 bits (402), Expect = 1.8e-38
Identity = 72/80 (90.00%), Postives = 78/80 (97.50%), Query Frame = 0 

Query: 1  MGQIQYSEKYFDDTYEYRHVVLPPEVAKLLPKNRLLSENEWRAIGVQQSRGWVHYAIHRP 60
          MGQIQYS+KYFDDT+EYRHVVLPPEVAKLLPKNR+LSE+EWRAIGVQQSRGWVHYAIHRP
Sbjct: 1  MGQIQYSDKYFDDTFEYRHVVLPPEVAKLLPKNRILSESEWRAIGVQQSRGWVHYAIHRP 60

Query: 61 EPHIMLFRRPLNYQQQQENQ 81
          EPHIMLFRRPLNYQQ+ + Q
Sbjct: 61 EPHIMLFRRPLNYQQEHQAQ 80

[Close]
BLAST of MC03g0379 vs. ExPASy Swiss-Prot
Match: P55933 (Probable cyclin-dependent kinases regulatory subunit OS=Physarum polycephalum OX=5791 PE=1 SV=1)

HSP 1 Score: 125.9 bits (315), Expect = 2.2e-28
Identity = 53/66 (80.30%), Postives = 62/66 (93.94%), Query Frame = 0 

Query: 4  IQYSEKYFDDTYEYRHVVLPPEVAKLLPKNRLLSENEWRAIGVQQSRGWVHYAIHRPEPH 63
          IQYSEKY+DD +EYRHV+LPP+VAK +PKNRLLSE EWR +GVQQS+GWVHYA+HRPEPH
Sbjct: 6  IQYSEKYYDDKFEYRHVILPPDVAKEIPKNRLLSEGEWRGLGVQQSQGWVHYALHRPEPH 65

Query: 64 IMLFRR 70
          I+LFRR
Sbjct: 66 ILLFRR 71

[Close]
BLAST of MC03g0379 vs. NCBI nr
Match: XP_022152941.1 (cyclin-dependent kinases regulatory subunit 1 [Momordica charantia])

HSP 1 Score: 182 bits (462), Expect = 5.84e-58
Identity = 87/87 (100.00%), Postives = 87/87 (100.00%), Query Frame = 0 

Query: 1  MGQIQYSEKYFDDTYEYRHVVLPPEVAKLLPKNRLLSENEWRAIGVQQSRGWVHYAIHRP 60
          MGQIQYSEKYFDDTYEYRHVVLPPEVAKLLPKNRLLSENEWRAIGVQQSRGWVHYAIHRP
Sbjct: 1  MGQIQYSEKYFDDTYEYRHVVLPPEVAKLLPKNRLLSENEWRAIGVQQSRGWVHYAIHRP 60

Query: 61 EPHIMLFRRPLNYQQQQENQAQQIMAK 87
          EPHIMLFRRPLNYQQQQENQAQQIMAK
Sbjct: 61 EPHIMLFRRPLNYQQQQENQAQQIMAK 87

[Close]
BLAST of MC03g0379 vs. NCBI nr
Match: PIA54927.1 (hypothetical protein AQUCO_00901082v1 [Aquilegia coerulea])

HSP 1 Score: 181 bits (458), Expect = 2.38e-57
Identity = 85/87 (97.70%), Postives = 87/87 (100.00%), Query Frame = 0 

Query: 1  MGQIQYSEKYFDDTYEYRHVVLPPEVAKLLPKNRLLSENEWRAIGVQQSRGWVHYAIHRP 60
          MGQIQYSEKYFDDTYEYRHV+LPPEVAKLLPKNRLLSENEWRAIGVQQSRGWVHYAIHRP
Sbjct: 1  MGQIQYSEKYFDDTYEYRHVILPPEVAKLLPKNRLLSENEWRAIGVQQSRGWVHYAIHRP 60

Query: 61 EPHIMLFRRPLNYQQQQENQAQQIMAK 87
          EPHIMLFRRPLNYQQQQENQAQQI+AK
Sbjct: 61 EPHIMLFRRPLNYQQQQENQAQQILAK 87

[Close]
BLAST of MC03g0379 vs. NCBI nr
Match: KAF5186146.1 (Cyclin-dependent kinases regulatory subunit [Thalictrum thalictroides])

HSP 1 Score: 179 bits (455), Expect = 6.83e-57
Identity = 85/87 (97.70%), Postives = 87/87 (100.00%), Query Frame = 0 

Query: 1  MGQIQYSEKYFDDTYEYRHVVLPPEVAKLLPKNRLLSENEWRAIGVQQSRGWVHYAIHRP 60
          MGQIQYSEKYFDDT+EYRHVVLPPEVAKLLPKNRLLSENEWRAIGVQQSRGWVHYAIHRP
Sbjct: 1  MGQIQYSEKYFDDTFEYRHVVLPPEVAKLLPKNRLLSENEWRAIGVQQSRGWVHYAIHRP 60

Query: 61 EPHIMLFRRPLNYQQQQENQAQQIMAK 87
          EPHIMLFRRPLNYQQQQENQAQQI+AK
Sbjct: 61 EPHIMLFRRPLNYQQQQENQAQQILAK 87

[Close]
BLAST of MC03g0379 vs. NCBI nr
Match: OVA17930.1 (Cyclin-dependent kinase [Macleaya cordata])

HSP 1 Score: 178 bits (451), Expect = 2.79e-56
Identity = 85/87 (97.70%), Postives = 86/87 (98.85%), Query Frame = 0 

Query: 1  MGQIQYSEKYFDDTYEYRHVVLPPEVAKLLPKNRLLSENEWRAIGVQQSRGWVHYAIHRP 60
          MGQIQYSEKYFDDTYEYRHVVLPPEVAKLLPKNRLLSENEWRAIGVQQSRGWVHYAIHRP
Sbjct: 1  MGQIQYSEKYFDDTYEYRHVVLPPEVAKLLPKNRLLSENEWRAIGVQQSRGWVHYAIHRP 60

Query: 61 EPHIMLFRRPLNYQQQQENQAQQIMAK 87
          EPHIMLFRRPLNYQQQQE QAQQI+AK
Sbjct: 61 EPHIMLFRRPLNYQQQQEAQAQQILAK 87

[Close]
BLAST of MC03g0379 vs. NCBI nr
Match: OMO84425.1 (Cyclin-dependent kinase, regulatory subunit [Corchorus capsularis] >OMO90372.1 Cyclin-dependent kinase, regulatory subunit [Corchorus olitorius])

HSP 1 Score: 177 bits (449), Expect = 5.80e-56
Identity = 83/86 (96.51%), Postives = 86/86 (100.00%), Query Frame = 0 

Query: 1  MGQIQYSEKYFDDTYEYRHVVLPPEVAKLLPKNRLLSENEWRAIGVQQSRGWVHYAIHRP 60
          MGQIQYSEKYFDDTYEYRHVVLPPEVAKLLPKNRLLSENEWRAIGVQQSRGWVHYAIHRP
Sbjct: 1  MGQIQYSEKYFDDTYEYRHVVLPPEVAKLLPKNRLLSENEWRAIGVQQSRGWVHYAIHRP 60

Query: 61 EPHIMLFRRPLNYQQQQENQAQQIMA 86
          EPHIMLFRRPLNYQQQQENQAQQ+++
Sbjct: 61 EPHIMLFRRPLNYQQQQENQAQQLIS 86

[Close]
BLAST of MC03g0379 vs. ExPASy TrEMBL
Match: A0A6J1DJ87 (Cyclin-dependent kinases regulatory subunit OS=Momordica charantia OX=3673 GN=LOC111020553 PE=3 SV=1)

HSP 1 Score: 182 bits (462), Expect = 2.83e-58
Identity = 87/87 (100.00%), Postives = 87/87 (100.00%), Query Frame = 0 

Query: 1  MGQIQYSEKYFDDTYEYRHVVLPPEVAKLLPKNRLLSENEWRAIGVQQSRGWVHYAIHRP 60
          MGQIQYSEKYFDDTYEYRHVVLPPEVAKLLPKNRLLSENEWRAIGVQQSRGWVHYAIHRP
Sbjct: 1  MGQIQYSEKYFDDTYEYRHVVLPPEVAKLLPKNRLLSENEWRAIGVQQSRGWVHYAIHRP 60

Query: 61 EPHIMLFRRPLNYQQQQENQAQQIMAK 87
          EPHIMLFRRPLNYQQQQENQAQQIMAK
Sbjct: 61 EPHIMLFRRPLNYQQQQENQAQQIMAK 87

[Close]
BLAST of MC03g0379 vs. ExPASy TrEMBL
Match: A0A2G5EH85 (Cyclin-dependent kinases regulatory subunit OS=Aquilegia coerulea OX=218851 GN=AQUCO_00901082v1 PE=3 SV=1)

HSP 1 Score: 181 bits (458), Expect = 1.15e-57
Identity = 85/87 (97.70%), Postives = 87/87 (100.00%), Query Frame = 0 

Query: 1  MGQIQYSEKYFDDTYEYRHVVLPPEVAKLLPKNRLLSENEWRAIGVQQSRGWVHYAIHRP 60
          MGQIQYSEKYFDDTYEYRHV+LPPEVAKLLPKNRLLSENEWRAIGVQQSRGWVHYAIHRP
Sbjct: 1  MGQIQYSEKYFDDTYEYRHVILPPEVAKLLPKNRLLSENEWRAIGVQQSRGWVHYAIHRP 60

Query: 61 EPHIMLFRRPLNYQQQQENQAQQIMAK 87
          EPHIMLFRRPLNYQQQQENQAQQI+AK
Sbjct: 61 EPHIMLFRRPLNYQQQQENQAQQILAK 87

[Close]
BLAST of MC03g0379 vs. ExPASy TrEMBL
Match: A0A7J6VM11 (Cyclin-dependent kinases regulatory subunit OS=Thalictrum thalictroides OX=46969 GN=FRX31_024268 PE=3 SV=1)

HSP 1 Score: 179 bits (455), Expect = 3.31e-57
Identity = 85/87 (97.70%), Postives = 87/87 (100.00%), Query Frame = 0 

Query: 1  MGQIQYSEKYFDDTYEYRHVVLPPEVAKLLPKNRLLSENEWRAIGVQQSRGWVHYAIHRP 60
          MGQIQYSEKYFDDT+EYRHVVLPPEVAKLLPKNRLLSENEWRAIGVQQSRGWVHYAIHRP
Sbjct: 1  MGQIQYSEKYFDDTFEYRHVVLPPEVAKLLPKNRLLSENEWRAIGVQQSRGWVHYAIHRP 60

Query: 61 EPHIMLFRRPLNYQQQQENQAQQIMAK 87
          EPHIMLFRRPLNYQQQQENQAQQI+AK
Sbjct: 61 EPHIMLFRRPLNYQQQQENQAQQILAK 87

[Close]
BLAST of MC03g0379 vs. ExPASy TrEMBL
Match: A0A200R5F3 (Cyclin-dependent kinases regulatory subunit OS=Macleaya cordata OX=56857 GN=BVC80_1835g330 PE=3 SV=1)

HSP 1 Score: 178 bits (451), Expect = 1.35e-56
Identity = 85/87 (97.70%), Postives = 86/87 (98.85%), Query Frame = 0 

Query: 1  MGQIQYSEKYFDDTYEYRHVVLPPEVAKLLPKNRLLSENEWRAIGVQQSRGWVHYAIHRP 60
          MGQIQYSEKYFDDTYEYRHVVLPPEVAKLLPKNRLLSENEWRAIGVQQSRGWVHYAIHRP
Sbjct: 1  MGQIQYSEKYFDDTYEYRHVVLPPEVAKLLPKNRLLSENEWRAIGVQQSRGWVHYAIHRP 60

Query: 61 EPHIMLFRRPLNYQQQQENQAQQIMAK 87
          EPHIMLFRRPLNYQQQQE QAQQI+AK
Sbjct: 61 EPHIMLFRRPLNYQQQQEAQAQQILAK 87

[Close]
BLAST of MC03g0379 vs. ExPASy TrEMBL
Match: A0A1R3IPB4 (Cyclin-dependent kinases regulatory subunit OS=Corchorus capsularis OX=210143 GN=CCACVL1_10826 PE=3 SV=1)

HSP 1 Score: 177 bits (449), Expect = 2.81e-56
Identity = 83/86 (96.51%), Postives = 86/86 (100.00%), Query Frame = 0 

Query: 1  MGQIQYSEKYFDDTYEYRHVVLPPEVAKLLPKNRLLSENEWRAIGVQQSRGWVHYAIHRP 60
          MGQIQYSEKYFDDTYEYRHVVLPPEVAKLLPKNRLLSENEWRAIGVQQSRGWVHYAIHRP
Sbjct: 1  MGQIQYSEKYFDDTYEYRHVVLPPEVAKLLPKNRLLSENEWRAIGVQQSRGWVHYAIHRP 60

Query: 61 EPHIMLFRRPLNYQQQQENQAQQIMA 86
          EPHIMLFRRPLNYQQQQENQAQQ+++
Sbjct: 61 EPHIMLFRRPLNYQQQQENQAQQLIS 86

[Close]
BLAST of MC03g0379 vs. TAIR 10
Match: AT2G27960.1 (cyclin-dependent kinase-subunit 1 )

HSP 1 Score: 175.6 bits (444), Expect = 1.7e-44
Identity = 81/87 (93.10%), Postives = 85/87 (97.70%), Query Frame = 0 

Query: 1  MGQIQYSEKYFDDTYEYRHVVLPPEVAKLLPKNRLLSENEWRAIGVQQSRGWVHYAIHRP 60
          MGQIQYSEKYFDDT+EYRHVVLPPEVAKLLPKNRLLSENEWRAIGVQQSRGWVHYA+HRP
Sbjct: 1  MGQIQYSEKYFDDTFEYRHVVLPPEVAKLLPKNRLLSENEWRAIGVQQSRGWVHYAVHRP 60

Query: 61 EPHIMLFRRPLNYQQQQENQAQQIMAK 88
          EPHIMLFRRPLNYQQQQENQAQ ++ K
Sbjct: 61 EPHIMLFRRPLNYQQQQENQAQNMLVK 87

[Close]
BLAST of MC03g0379 vs. TAIR 10
Match: AT2G27970.1 (CDK-subunit 2 )

HSP 1 Score: 159.5 bits (402), Expect = 1.3e-39
Identity = 72/80 (90.00%), Postives = 78/80 (97.50%), Query Frame = 0 

Query: 1  MGQIQYSEKYFDDTYEYRHVVLPPEVAKLLPKNRLLSENEWRAIGVQQSRGWVHYAIHRP 60
          MGQIQYS+KYFDDT+EYRHVVLPPEVAKLLPKNR+LSE+EWRAIGVQQSRGWVHYAIHRP
Sbjct: 1  MGQIQYSDKYFDDTFEYRHVVLPPEVAKLLPKNRILSESEWRAIGVQQSRGWVHYAIHRP 60

Query: 61 EPHIMLFRRPLNYQQQQENQ 81
          EPHIMLFRRPLNYQQ+ + Q
Sbjct: 61 EPHIMLFRRPLNYQQEHQAQ 80

The following BLAST results are available for this feature:
BLAST of MC03g0379 vs. ExPASy Swiss-Prot
Match NameE-valueIdentityDescription
O232492.4e-4393.10Cyclin-dependent kinases regulatory subunit 1 OS=Arabidopsis thaliana OX=3702 GN... [more]
A2XCH81.1e-4096.30Cyclin-dependent kinases regulatory subunit 1 OS=Oryza sativa subsp. indica OX=3... [more]
Q6PS571.1e-4096.30Cyclin-dependent kinases regulatory subunit 1 OS=Oryza sativa subsp. japonica OX... [more]
Q9SJJ51.8e-3890.00Cyclin-dependent kinases regulatory subunit 2 OS=Arabidopsis thaliana OX=3702 GN... [more]
P559332.2e-2880.30Probable cyclin-dependent kinases regulatory subunit OS=Physarum polycephalum OX... [more]
BLAST of MC03g0379 vs. NCBI nr
Match NameE-valueIdentityDescription
XP_022152941.15.84e-58100.00cyclin-dependent kinases regulatory subunit 1 [Momordica charantia][more]
PIA54927.12.38e-5797.70hypothetical protein AQUCO_00901082v1 [Aquilegia coerulea][more]
KAF5186146.16.83e-5797.70Cyclin-dependent kinases regulatory subunit [Thalictrum thalictroides][more]
OVA17930.12.79e-5697.70Cyclin-dependent kinase [Macleaya cordata][more]
OMO84425.15.80e-5696.51Cyclin-dependent kinase, regulatory subunit [Corchorus capsularis] >OMO90372.1 C... [more]
BLAST of MC03g0379 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
A0A6J1DJ872.83e-58100.00Cyclin-dependent kinases regulatory subunit OS=Momordica charantia OX=3673 GN=LO... [more]
A0A2G5EH851.15e-5797.70Cyclin-dependent kinases regulatory subunit OS=Aquilegia coerulea OX=218851 GN=A... [more]
A0A7J6VM113.31e-5797.70Cyclin-dependent kinases regulatory subunit OS=Thalictrum thalictroides OX=46969... [more]
A0A200R5F31.35e-5697.70Cyclin-dependent kinases regulatory subunit OS=Macleaya cordata OX=56857 GN=BVC8... [more]
A0A1R3IPB42.81e-5696.51Cyclin-dependent kinases regulatory subunit OS=Corchorus capsularis OX=210143 GN... [more]
BLAST of MC03g0379 vs. TAIR 10
Match NameE-valueIdentityDescription
AT2G27960.11.7e-4493.10cyclin-dependent kinase-subunit 1 [more]
AT2G27970.11.3e-3990.00CDK-subunit 2 [more]
InterPro
Analysis Name: InterPro Annotations of Bitter gourd (Dali-11) v1
Date Performed: 2021-10-25
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR000789Cyclin-dependent kinase, regulatory subunitPRINTSPR00296CYCLINKINASEcoord: 40..54
score: 75.9
coord: 3..17
score: 65.13
coord: 55..69
score: 76.41
coord: 18..32
score: 62.05
IPR000789Cyclin-dependent kinase, regulatory subunitSMARTSM01084CKS_2coord: 3..72
e-value: 1.0E-47
score: 174.5
IPR000789Cyclin-dependent kinase, regulatory subunitPFAMPF01111CKScoord: 4..70
e-value: 4.8E-36
score: 122.8
IPR000789Cyclin-dependent kinase, regulatory subunitPROSITEPS00944CKS_1coord: 6..24
IPR036858Cyclin-dependent kinase, regulatory subunit superfamilyGENE3D3.30.170.10coord: 1..84
e-value: 1.3E-40
score: 139.7
IPR036858Cyclin-dependent kinase, regulatory subunit superfamilySUPERFAMILY55637Cell cycle regulatory proteinscoord: 1..81
NoneNo IPR availablePANTHERPTHR23415:SF29CYCLIN-DEPENDENT KINASES REGULATORY SUBUNITcoord: 1..85
NoneNo IPR availablePANTHERPTHR23415CYCLIN-DEPENDENT KINASES REGULATORY SUBUNIT/60S RIBOSOME SUBUNIT BIOGENESIS PROTEIN NIP7coord: 1..85

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
MC03g0379.1MC03g0379.1mRNA


GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0051301 cell division
biological_process GO:0045737 positive regulation of cyclin-dependent protein serine/threonine kinase activity
biological_process GO:0007346 regulation of mitotic cell cycle
cellular_component GO:0000307 cyclin-dependent protein kinase holoenzyme complex
cellular_component GO:0019005 SCF ubiquitin ligase complex
molecular_function GO:0061575 cyclin-dependent protein serine/threonine kinase activator activity
molecular_function GO:0042393 histone binding
molecular_function GO:0016301 kinase activity
molecular_function GO:0019901 protein kinase binding
molecular_function GO:0043130 ubiquitin binding
molecular_function GO:0016538 cyclin-dependent protein serine/threonine kinase regulator activity