MC03g0377 (gene) Bitter gourd (Dali-11) v1

Overview


Name	MC03g0377
Type	gene
Organism	Momordica charantia cv. Dali-11 (Bitter gourd (Dali-11) v1)
Description	Histone H2B
Location	MC03: 10531146 .. 10532070 (+)
RNA-Seq Expression	MC03g0377
Synteny	MC03g0377

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSpolypeptideutr3

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGCGCCGAAGGCCGAGAAGAAGCCCGCTGAGAAGAAGCCGGCGGCGGAGGAGAAGAAGGCGGAGAAGAAGCCGAGAGCCGAGAAGAAGCTGCCGAAAGATGCCGCCGACAAGAAGAAGAAGAGGTCGAAGAAGAGCGTCGAGACTTACAAGATCTACATCTTCAAGGTGCTGAAGCAGGTTCATCCCGACATCGGAATCTCCAGCAAGGCCATGGGAATCATGAACAGCTTCATCAACGACATTTTCGAGAAGCTCGCTCAGGAATCCTCCAAGCTCGCTCGCTACAACAAGAAGCCGACCATCACCTCTCGGGAGATCCAAACGGCGGTGCGCCTCGTTCTTCCTGGTGAGTTGGCCAAGCATGCCGTCTCTGAGGGTACCAAGGCTGTAACCAAGTTTACTAGTTCTTAGATTCGTAGATTAGGGCTTTCTTGTGTAAAAAAGCTGCCTCACTCGTCTGAATCGTTCATCTCGCTTCTTTTTGTTGCATATTTTGGAATTAACTGAATGATAATCGGTTTATAAAACGCGATTCCTTAAGTTATCTTCTCGATTCTGGCCACATTATTAGGATTGCACTCTGTTCGATTTGTGTGCTGGATTTCCAAGTTTTAACCCTAATTTTAACTTATTGAGTTCATATTCTTGTGCCTGTCTCTGCAATTGAACTTTGATTAGCAATTCAAATTCTAGGGTTCATCTTGACTTTTTATGATAGCATCTCTGAATATAGACTAGAACTTCGCACAATTCGACCGTATGATCATTATGAACACTCATTGTTCTAATTGTTAAGGAATTTCTCTAATTGAGAGCTTGGTTCAACCCACAATCAGTATATTTTGTATTGGGCAATTATTCTTTGTTCATAGTTTTTAGTGTATGTTTGTGGACATTTCAATATAAATCTCTTTTTTCATCC

mRNA sequence

ATGGCGCCGAAGGCCGAGAAGAAGCCCGCTGAGAAGAAGCCGGCGGCGGAGGAGAAGAAGGCGGAGAAGAAGCCGAGAGCCGAGAAGAAGCTGCCGAAAGATGCCGCCGACAAGAAGAAGAAGAGGTCGAAGAAGAGCGTCGAGACTTACAAGATCTACATCTTCAAGGTGCTGAAGCAGGTTCATCCCGACATCGGAATCTCCAGCAAGGCCATGGGAATCATGAACAGCTTCATCAACGACATTTTCGAGAAGCTCGCTCAGGAATCCTCCAAGCTCGCTCGCTACAACAAGAAGCCGACCATCACCTCTCGGGAGATCCAAACGGCGGTGCGCCTCGTTCTTCCTGGTGAGTTGGCCAAGCATGCCGTCTCTGAGGGTACCAAGGCTGTAACCAAGTTTACTAGTTCTTAGATTCGTAGATTAGGGCTTTCTTGTGTAAAAAAGCTGCCTCACTCGTCTGAATCGTTCATCTCGCTTCTTTTTGTTGCATATTTTGGAATTAACTGAATGATAATCGGTTTATAAAACGCGATTCCTTAAGTTATCTTCTCGATTCTGGCCACATTATTAGGATTGCACTCTGTTCGATTTGTGTGCTGGATTTCCAAGTTTTAACCCTAATTTTAACTTATTGAGTTCATATTCTTGTGCCTGTCTCTGCAATTGAACTTTGATTAGCAATTCAAATTCTAGGGTTCATCTTGACTTTTTATGATAGCATCTCTGAATATAGACTAGAACTTCGCACAATTCGACCGTATGATCATTATGAACACTCATTGTTCTAATTGTTAAGGAATTTCTCTAATTGAGAGCTTGGTTCAACCCACAATCAGTATATTTTGTATTGGGCAATTATTCTTTGTTCATAGTTTTTAGTGTATGTTTGTGGACATTTCAATATAAATCTCTTTTTTCATCC

Coding sequence (CDS)

ATGGCGCCGAAGGCCGAGAAGAAGCCCGCTGAGAAGAAGCCGGCGGCGGAGGAGAAGAAGGCGGAGAAGAAGCCGAGAGCCGAGAAGAAGCTGCCGAAAGATGCCGCCGACAAGAAGAAGAAGAGGTCGAAGAAGAGCGTCGAGACTTACAAGATCTACATCTTCAAGGTGCTGAAGCAGGTTCATCCCGACATCGGAATCTCCAGCAAGGCCATGGGAATCATGAACAGCTTCATCAACGACATTTTCGAGAAGCTCGCTCAGGAATCCTCCAAGCTCGCTCGCTACAACAAGAAGCCGACCATCACCTCTCGGGAGATCCAAACGGCGGTGCGCCTCGTTCTTCCTGGTGAGTTGGCCAAGCATGCCGTCTCTGAGGGTACCAAGGCTGTAACCAAGTTTACTAGTTCTTAG

Protein sequence

MAPKAEKKPAEKKPAAEEKKAEKKPRAEKKLPKDAADKKKKRSKKSVETYKIYIFKVLKQVHPDIGISSKAMGIMNSFINDIFEKLAQESSKLARYNKKPTITSREIQTAVRLVLPGELAKHAVSEGTKAVTKFTSS

Homology

[Close]

BLAST of MC03g0377 vs. ExPASy Swiss-Prot
Match: O65818 (Histone H2B.2 OS=Solanum lycopersicum OX=4081 GN=H2B-2 PE=2 SV=2)

HSP 1 Score: 215.3 bits (547), Expect = 4.3e-55
Identity = 126/141 (89.36%), Postives = 133/141 (94.33%), Query Frame = 0


Query: 1   MAPKAEKKPAEKKPAAEEKKAEKKPRAEKKLPKDA----ADKKKKRSKKSVETYKIYIFK 60
           MAPKAEKKPAEKKP AEEKKAEK P+A KKLPK++    ADKKKK+SKKS+ETYKIYIFK
Sbjct: 1   MAPKAEKKPAEKKP-AEEKKAEKTPKAGKKLPKESGSSGADKKKKKSKKSIETYKIYIFK 60

Query: 61  VLKQVHPDIGISSKAMGIMNSFINDIFEKLAQESSKLARYNKKPTITSREIQTAVRLVLP 120
           VLKQVHPDIGISSK+MGIMNSFINDIFEKLAQESS+LAR NKKPTITSREIQTAVRLVLP
Sbjct: 61  VLKQVHPDIGISSKSMGIMNSFINDIFEKLAQESSRLARINKKPTITSREIQTAVRLVLP 120

Query: 121 GELAKHAVSEGTKAVTKFTSS 138
           GELAKHAVSEGTKAVTKFTSS
Sbjct: 121 GELAKHAVSEGTKAVTKFTSS 140

[Close]

BLAST of MC03g0377 vs. ExPASy Swiss-Prot
Match: O65819 (Histone H2B.3 (Fragment) OS=Solanum lycopersicum OX=4081 GN=H2B-3 PE=2 SV=1)

HSP 1 Score: 213.8 bits (543), Expect = 1.2e-54
Identity = 123/135 (91.11%), Postives = 128/135 (94.81%), Query Frame = 0


Query: 5   AEKKPAEKKPAAEEKKAEKKPRAEKKLPKDAA--DKKKKRSKKSVETYKIYIFKVLKQVH 64
           AEKKPAEK P AE+  AEKKP+A KKLPKDAA  DKKKKRSKK+VETYKIYIFKVLKQVH
Sbjct: 3   AEKKPAEKTPVAEKAPAEKKPKAGKKLPKDAAAGDKKKKRSKKAVETYKIYIFKVLKQVH 62

Query: 65  PDIGISSKAMGIMNSFINDIFEKLAQESSKLARYNKKPTITSREIQTAVRLVLPGELAKH 124
           PDIGISSKAMGIMNSFINDIFEKLAQE+S+LARYNKKPTITSREIQTAVRLVLPGELAKH
Sbjct: 63  PDIGISSKAMGIMNSFINDIFEKLAQEASRLARYNKKPTITSREIQTAVRLVLPGELAKH 122

Query: 125 AVSEGTKAVTKFTSS 138
           AVSEGTKAVTKFTSS
Sbjct: 123 AVSEGTKAVTKFTSS 137

[Close]

BLAST of MC03g0377 vs. ExPASy Swiss-Prot
Match: O22582 (Histone H2B OS=Gossypium hirsutum OX=3635 GN=HIS2B PE=2 SV=3)

HSP 1 Score: 213.4 bits (542), Expect = 1.6e-54
Identity = 127/147 (86.39%), Postives = 132/147 (89.80%), Query Frame = 0


Query: 1   MAPKAEKKPAEKKPAAEEK------KAEKKPRAEKKLPKD----AADKKKKRSKKSVETY 60
           MAPKAEKKPAEKKPA E+K       AEKKP+A KKLPK+    A DKKKKR KKSVETY
Sbjct: 1   MAPKAEKKPAEKKPAEEKKAVAEKAPAEKKPKAGKKLPKEGGAAAGDKKKKRVKKSVETY 60

Query: 61  KIYIFKVLKQVHPDIGISSKAMGIMNSFINDIFEKLAQESSKLARYNKKPTITSREIQTA 120
           KIYIFKVLKQVHPDIGISSKAMGIMNSFINDIFEKLAQE+S+LARYNKKPTITSREIQTA
Sbjct: 61  KIYIFKVLKQVHPDIGISSKAMGIMNSFINDIFEKLAQEASRLARYNKKPTITSREIQTA 120

Query: 121 VRLVLPGELAKHAVSEGTKAVTKFTSS 138
           VRLVLPGELAKHAVSEGTKAVTKFTSS
Sbjct: 121 VRLVLPGELAKHAVSEGTKAVTKFTSS 147

[Close]

BLAST of MC03g0377 vs. ExPASy Swiss-Prot
Match: Q9LQQ4 (Histone H2B.1 OS=Arabidopsis thaliana OX=3702 GN=At1g07790 PE=1 SV=3)

HSP 1 Score: 211.8 bits (538), Expect = 4.7e-54
Identity = 127/148 (85.81%), Postives = 132/148 (89.19%), Query Frame = 0


Query: 1   MAPKAEKKPAEKK----------PAAEEKKAEKKPRAEKKL-PKDAADKKKKRSKKSVET 60
           MAP+AEKKPAEKK           AAE+  AEKKP+A KKL PK+A DKKKKRSKK+VET
Sbjct: 1   MAPRAEKKPAEKKTAAERPVEENKAAEKAPAEKKPKAGKKLPPKEAGDKKKKRSKKNVET 60

Query: 61  YKIYIFKVLKQVHPDIGISSKAMGIMNSFINDIFEKLAQESSKLARYNKKPTITSREIQT 120
           YKIYIFKVLKQVHPDIGISSKAMGIMNSFINDIFEKLAQESSKLARYNKKPTITSREIQT
Sbjct: 61  YKIYIFKVLKQVHPDIGISSKAMGIMNSFINDIFEKLAQESSKLARYNKKPTITSREIQT 120

Query: 121 AVRLVLPGELAKHAVSEGTKAVTKFTSS 138
           AVRLVLPGELAKHAVSEGTKAVTKFTSS
Sbjct: 121 AVRLVLPGELAKHAVSEGTKAVTKFTSS 148

[Close]

BLAST of MC03g0377 vs. ExPASy Swiss-Prot
Match: O65821 (Histone H2B.1 OS=Solanum lycopersicum OX=4081 GN=H2B-1 PE=2 SV=4)

HSP 1 Score: 211.8 bits (538), Expect = 4.7e-54
Identity = 126/142 (88.73%), Postives = 131/142 (92.25%), Query Frame = 0


Query: 1   MAPKAEKKPAEKKPA----AEEKKAEKKPRAEKKLPKDA-ADKKKKRSKKSVETYKIYIF 60
           MAPKA KKPAEKKP     AEE  AEKKP+A KKLPKDA ADKKKK+SKKSVETYKIYIF
Sbjct: 1   MAPKAGKKPAEKKPVEEKKAEEVPAEKKPKAGKKLPKDAGADKKKKKSKKSVETYKIYIF 60

Query: 61  KVLKQVHPDIGISSKAMGIMNSFINDIFEKLAQESSKLARYNKKPTITSREIQTAVRLVL 120
           KVLKQVHPDIGISSK+MGIMNSFINDIFEKLAQESS+LAR NKKPTITSREIQTAVRLVL
Sbjct: 61  KVLKQVHPDIGISSKSMGIMNSFINDIFEKLAQESSRLARINKKPTITSREIQTAVRLVL 120

Query: 121 PGELAKHAVSEGTKAVTKFTSS 138
           PGELAKHAVSEGTKAVTKFTS+
Sbjct: 121 PGELAKHAVSEGTKAVTKFTSN 142

[Close]

BLAST of MC03g0377 vs. NCBI nr
Match: XP_022152940.1 (histone H2B.2 [Momordica charantia])

HSP 1 Score: 245 bits (626), Expect = 2.21e-81
Identity = 137/137 (100.00%), Postives = 137/137 (100.00%), Query Frame = 0


Query: 1   MAPKAEKKPAEKKPAAEEKKAEKKPRAEKKLPKDAADKKKKRSKKSVETYKIYIFKVLKQ 60
           MAPKAEKKPAEKKPAAEEKKAEKKPRAEKKLPKDAADKKKKRSKKSVETYKIYIFKVLKQ
Sbjct: 1   MAPKAEKKPAEKKPAAEEKKAEKKPRAEKKLPKDAADKKKKRSKKSVETYKIYIFKVLKQ 60

Query: 61  VHPDIGISSKAMGIMNSFINDIFEKLAQESSKLARYNKKPTITSREIQTAVRLVLPGELA 120
           VHPDIGISSKAMGIMNSFINDIFEKLAQESSKLARYNKKPTITSREIQTAVRLVLPGELA
Sbjct: 61  VHPDIGISSKAMGIMNSFINDIFEKLAQESSKLARYNKKPTITSREIQTAVRLVLPGELA 120

Query: 121 KHAVSEGTKAVTKFTSS 137
           KHAVSEGTKAVTKFTSS
Sbjct: 121 KHAVSEGTKAVTKFTSS 137

[Close]

BLAST of MC03g0377 vs. NCBI nr
Match: XP_022152883.1 (histone H2B.7 [Momordica charantia])

HSP 1 Score: 239 bits (610), Expect = 7.18e-79
Identity = 137/142 (96.48%), Postives = 137/142 (96.48%), Query Frame = 0


Query: 1   MAPKAEKKPAEKKPAAEEKKAEK-----KPRAEKKLPKDAADKKKKRSKKSVETYKIYIF 60
           MAPKAEKKPAEKKPAAEEKKAEK     KPRAEKKLPKDAADKKKKRSKKSVETYKIYIF
Sbjct: 1   MAPKAEKKPAEKKPAAEEKKAEKAPAEKKPRAEKKLPKDAADKKKKRSKKSVETYKIYIF 60

Query: 61  KVLKQVHPDIGISSKAMGIMNSFINDIFEKLAQESSKLARYNKKPTITSREIQTAVRLVL 120
           KVLKQVHPDIGISSKAMGIMNSFINDIFEKLAQESSKLARYNKKPTITSREIQTAVRLVL
Sbjct: 61  KVLKQVHPDIGISSKAMGIMNSFINDIFEKLAQESSKLARYNKKPTITSREIQTAVRLVL 120

Query: 121 PGELAKHAVSEGTKAVTKFTSS 137
           PGELAKHAVSEGTKAVTKFTSS
Sbjct: 121 PGELAKHAVSEGTKAVTKFTSS 142

[Close]

BLAST of MC03g0377 vs. NCBI nr
Match: XP_022964661.1 (histone H2B.7-like [Cucurbita moschata] >XP_022970348.1 histone H2B.7-like [Cucurbita maxima] >XP_023519437.1 histone H2B.7-like [Cucurbita pepo subsp. pepo] >KAG6583589.1 Histone H2B, partial [Cucurbita argyrosperma subsp. sororia] >KAG7019290.1 Histone H2B, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 238 bits (606), Expect = 2.92e-78
Identity = 135/142 (95.07%), Postives = 137/142 (96.48%), Query Frame = 0


Query: 1   MAPKAEKKPAEKKPAAEEKKAEK-----KPRAEKKLPKDAADKKKKRSKKSVETYKIYIF 60
           MAPKAEKKPAEKKPAAEEKKAEK     KPRAEKKLPKDAADKKKKR+KKS+ETYKIYIF
Sbjct: 1   MAPKAEKKPAEKKPAAEEKKAEKAPAEKKPRAEKKLPKDAADKKKKRAKKSIETYKIYIF 60

Query: 61  KVLKQVHPDIGISSKAMGIMNSFINDIFEKLAQESSKLARYNKKPTITSREIQTAVRLVL 120
           KVLKQVHPDIGISSKAMGIMNSFINDIFEKLAQESSKLARYNKKPTITSREIQTAVRLVL
Sbjct: 61  KVLKQVHPDIGISSKAMGIMNSFINDIFEKLAQESSKLARYNKKPTITSREIQTAVRLVL 120

Query: 121 PGELAKHAVSEGTKAVTKFTSS 137
           PGELAKHAVSEGTKAVTKFTSS
Sbjct: 121 PGELAKHAVSEGTKAVTKFTSS 142

[Close]

BLAST of MC03g0377 vs. NCBI nr
Match: XP_004139453.1 (histone H2B.7 [Cucumis sativus] >KGN64858.1 hypothetical protein Csa_022751 [Cucumis sativus])

HSP 1 Score: 236 bits (603), Expect = 8.38e-78
Identity = 134/142 (94.37%), Postives = 137/142 (96.48%), Query Frame = 0


Query: 1   MAPKAEKKPAEKKPAAEEKKAEK-----KPRAEKKLPKDAADKKKKRSKKSVETYKIYIF 60
           MAPKAEKKPAEKKPAAEEKKAEK     KPRAEKKLPKDA+DKKKKR+KKS+ETYKIYIF
Sbjct: 1   MAPKAEKKPAEKKPAAEEKKAEKTPAEKKPRAEKKLPKDASDKKKKRAKKSIETYKIYIF 60

Query: 61  KVLKQVHPDIGISSKAMGIMNSFINDIFEKLAQESSKLARYNKKPTITSREIQTAVRLVL 120
           KVLKQVHPDIGISSKAMGIMNSFINDIFEKLAQESSKLARYNKKPTITSREIQTAVRLVL
Sbjct: 61  KVLKQVHPDIGISSKAMGIMNSFINDIFEKLAQESSKLARYNKKPTITSREIQTAVRLVL 120

Query: 121 PGELAKHAVSEGTKAVTKFTSS 137
           PGELAKHAVSEGTKAVTKFTSS
Sbjct: 121 PGELAKHAVSEGTKAVTKFTSS 142

[Close]

BLAST of MC03g0377 vs. NCBI nr
Match: XP_038893815.1 (histone H2B.7-like [Benincasa hispida] >XP_038894882.1 histone H2B.7-like [Benincasa hispida] >KAA0032591.1 histone H2B.7 [Cucumis melo var. makuwa] >KGN64852.1 hypothetical protein Csa_022825 [Cucumis sativus] >KAA0032596.1 histone H2B.7 [Cucumis melo var. makuwa] >KAA0032602.1 histone H2B.7 [Cucumis melo var. makuwa] >TYK20883.1 histone H2B.7 [Cucumis melo var. makuwa])

HSP 1 Score: 236 bits (603), Expect = 8.38e-78
Identity = 134/142 (94.37%), Postives = 137/142 (96.48%), Query Frame = 0


Query: 1   MAPKAEKKPAEKKPAAEEKKAEK-----KPRAEKKLPKDAADKKKKRSKKSVETYKIYIF 60
           MAPKAEKKPAEKKPAAEEKKAEK     KPRAEKKLPKDA+DKKKKR+KKS+ETYKIYIF
Sbjct: 1   MAPKAEKKPAEKKPAAEEKKAEKAPAEKKPRAEKKLPKDASDKKKKRAKKSIETYKIYIF 60

Query: 61  KVLKQVHPDIGISSKAMGIMNSFINDIFEKLAQESSKLARYNKKPTITSREIQTAVRLVL 120
           KVLKQVHPDIGISSKAMGIMNSFINDIFEKLAQESSKLARYNKKPTITSREIQTAVRLVL
Sbjct: 61  KVLKQVHPDIGISSKAMGIMNSFINDIFEKLAQESSKLARYNKKPTITSREIQTAVRLVL 120

Query: 121 PGELAKHAVSEGTKAVTKFTSS 137
           PGELAKHAVSEGTKAVTKFTSS
Sbjct: 121 PGELAKHAVSEGTKAVTKFTSS 142

[Close]

BLAST of MC03g0377 vs. ExPASy TrEMBL
Match: A0A6J1DFD0 (Histone H2B OS=Momordica charantia OX=3673 GN=LOC111020552 PE=3 SV=1)

HSP 1 Score: 245 bits (626), Expect = 1.07e-81
Identity = 137/137 (100.00%), Postives = 137/137 (100.00%), Query Frame = 0


Query: 1   MAPKAEKKPAEKKPAAEEKKAEKKPRAEKKLPKDAADKKKKRSKKSVETYKIYIFKVLKQ 60
           MAPKAEKKPAEKKPAAEEKKAEKKPRAEKKLPKDAADKKKKRSKKSVETYKIYIFKVLKQ
Sbjct: 1   MAPKAEKKPAEKKPAAEEKKAEKKPRAEKKLPKDAADKKKKRSKKSVETYKIYIFKVLKQ 60

Query: 61  VHPDIGISSKAMGIMNSFINDIFEKLAQESSKLARYNKKPTITSREIQTAVRLVLPGELA 120
           VHPDIGISSKAMGIMNSFINDIFEKLAQESSKLARYNKKPTITSREIQTAVRLVLPGELA
Sbjct: 61  VHPDIGISSKAMGIMNSFINDIFEKLAQESSKLARYNKKPTITSREIQTAVRLVLPGELA 120

Query: 121 KHAVSEGTKAVTKFTSS 137
           KHAVSEGTKAVTKFTSS
Sbjct: 121 KHAVSEGTKAVTKFTSS 137

[Close]

BLAST of MC03g0377 vs. ExPASy TrEMBL
Match: A0A6J1DG30 (Histone H2B OS=Momordica charantia OX=3673 GN=LOC111020509 PE=3 SV=1)

HSP 1 Score: 239 bits (610), Expect = 3.48e-79
Identity = 137/142 (96.48%), Postives = 137/142 (96.48%), Query Frame = 0


Query: 1   MAPKAEKKPAEKKPAAEEKKAEK-----KPRAEKKLPKDAADKKKKRSKKSVETYKIYIF 60
           MAPKAEKKPAEKKPAAEEKKAEK     KPRAEKKLPKDAADKKKKRSKKSVETYKIYIF
Sbjct: 1   MAPKAEKKPAEKKPAAEEKKAEKAPAEKKPRAEKKLPKDAADKKKKRSKKSVETYKIYIF 60

Query: 61  KVLKQVHPDIGISSKAMGIMNSFINDIFEKLAQESSKLARYNKKPTITSREIQTAVRLVL 120
           KVLKQVHPDIGISSKAMGIMNSFINDIFEKLAQESSKLARYNKKPTITSREIQTAVRLVL
Sbjct: 61  KVLKQVHPDIGISSKAMGIMNSFINDIFEKLAQESSKLARYNKKPTITSREIQTAVRLVL 120

Query: 121 PGELAKHAVSEGTKAVTKFTSS 137
           PGELAKHAVSEGTKAVTKFTSS
Sbjct: 121 PGELAKHAVSEGTKAVTKFTSS 142

[Close]

BLAST of MC03g0377 vs. ExPASy TrEMBL
Match: A0A6J1I3M0 (Histone H2B OS=Cucurbita maxima OX=3661 GN=LOC111469340 PE=3 SV=1)

HSP 1 Score: 238 bits (606), Expect = 1.42e-78
Identity = 135/142 (95.07%), Postives = 137/142 (96.48%), Query Frame = 0


Query: 1   MAPKAEKKPAEKKPAAEEKKAEK-----KPRAEKKLPKDAADKKKKRSKKSVETYKIYIF 60
           MAPKAEKKPAEKKPAAEEKKAEK     KPRAEKKLPKDAADKKKKR+KKS+ETYKIYIF
Sbjct: 1   MAPKAEKKPAEKKPAAEEKKAEKAPAEKKPRAEKKLPKDAADKKKKRAKKSIETYKIYIF 60

Query: 61  KVLKQVHPDIGISSKAMGIMNSFINDIFEKLAQESSKLARYNKKPTITSREIQTAVRLVL 120
           KVLKQVHPDIGISSKAMGIMNSFINDIFEKLAQESSKLARYNKKPTITSREIQTAVRLVL
Sbjct: 61  KVLKQVHPDIGISSKAMGIMNSFINDIFEKLAQESSKLARYNKKPTITSREIQTAVRLVL 120

Query: 121 PGELAKHAVSEGTKAVTKFTSS 137
           PGELAKHAVSEGTKAVTKFTSS
Sbjct: 121 PGELAKHAVSEGTKAVTKFTSS 142

[Close]

BLAST of MC03g0377 vs. ExPASy TrEMBL
Match: A0A6J1HJK3 (Histone H2B OS=Cucurbita moschata OX=3662 GN=LOC111464672 PE=3 SV=1)

HSP 1 Score: 238 bits (606), Expect = 1.42e-78
Identity = 135/142 (95.07%), Postives = 137/142 (96.48%), Query Frame = 0


Query: 1   MAPKAEKKPAEKKPAAEEKKAEK-----KPRAEKKLPKDAADKKKKRSKKSVETYKIYIF 60
           MAPKAEKKPAEKKPAAEEKKAEK     KPRAEKKLPKDAADKKKKR+KKS+ETYKIYIF
Sbjct: 1   MAPKAEKKPAEKKPAAEEKKAEKAPAEKKPRAEKKLPKDAADKKKKRAKKSIETYKIYIF 60

Query: 61  KVLKQVHPDIGISSKAMGIMNSFINDIFEKLAQESSKLARYNKKPTITSREIQTAVRLVL 120
           KVLKQVHPDIGISSKAMGIMNSFINDIFEKLAQESSKLARYNKKPTITSREIQTAVRLVL
Sbjct: 61  KVLKQVHPDIGISSKAMGIMNSFINDIFEKLAQESSKLARYNKKPTITSREIQTAVRLVL 120

Query: 121 PGELAKHAVSEGTKAVTKFTSS 137
           PGELAKHAVSEGTKAVTKFTSS
Sbjct: 121 PGELAKHAVSEGTKAVTKFTSS 142

[Close]

BLAST of MC03g0377 vs. ExPASy TrEMBL
Match: A0A0A0LV55 (Histone H2B OS=Cucumis sativus OX=3659 GN=Csa_1G132130 PE=3 SV=1)

HSP 1 Score: 236 bits (603), Expect = 4.06e-78
Identity = 134/142 (94.37%), Postives = 137/142 (96.48%), Query Frame = 0


Query: 1   MAPKAEKKPAEKKPAAEEKKAEK-----KPRAEKKLPKDAADKKKKRSKKSVETYKIYIF 60
           MAPKAEKKPAEKKPAAEEKKAEK     KPRAEKKLPKDA+DKKKKR+KKS+ETYKIYIF
Sbjct: 1   MAPKAEKKPAEKKPAAEEKKAEKAPAEKKPRAEKKLPKDASDKKKKRAKKSIETYKIYIF 60

Query: 61  KVLKQVHPDIGISSKAMGIMNSFINDIFEKLAQESSKLARYNKKPTITSREIQTAVRLVL 120
           KVLKQVHPDIGISSKAMGIMNSFINDIFEKLAQESSKLARYNKKPTITSREIQTAVRLVL
Sbjct: 61  KVLKQVHPDIGISSKAMGIMNSFINDIFEKLAQESSKLARYNKKPTITSREIQTAVRLVL 120

Query: 121 PGELAKHAVSEGTKAVTKFTSS 137
           PGELAKHAVSEGTKAVTKFTSS
Sbjct: 121 PGELAKHAVSEGTKAVTKFTSS 142

[Close]

BLAST of MC03g0377 vs. TAIR 10
Match: AT1G07790.1 (Histone superfamily protein )

HSP 1 Score: 211.8 bits (538), Expect = 3.4e-55
Identity = 127/148 (85.81%), Postives = 132/148 (89.19%), Query Frame = 0


Query: 1   MAPKAEKKPAEKK----------PAAEEKKAEKKPRAEKKL-PKDAADKKKKRSKKSVET 60
           MAP+AEKKPAEKK           AAE+  AEKKP+A KKL PK+A DKKKKRSKK+VET
Sbjct: 1   MAPRAEKKPAEKKTAAERPVEENKAAEKAPAEKKPKAGKKLPPKEAGDKKKKRSKKNVET 60

Query: 61  YKIYIFKVLKQVHPDIGISSKAMGIMNSFINDIFEKLAQESSKLARYNKKPTITSREIQT 120
           YKIYIFKVLKQVHPDIGISSKAMGIMNSFINDIFEKLAQESSKLARYNKKPTITSREIQT
Sbjct: 61  YKIYIFKVLKQVHPDIGISSKAMGIMNSFINDIFEKLAQESSKLARYNKKPTITSREIQT 120

Query: 121 AVRLVLPGELAKHAVSEGTKAVTKFTSS 138
           AVRLVLPGELAKHAVSEGTKAVTKFTSS
Sbjct: 121 AVRLVLPGELAKHAVSEGTKAVTKFTSS 148

[Close]

BLAST of MC03g0377 vs. TAIR 10
Match: AT3G46030.1 (Histone superfamily protein )

HSP 1 Score: 211.8 bits (538), Expect = 3.4e-55
Identity = 126/145 (86.90%), Postives = 129/145 (88.97%), Query Frame = 0


Query: 1   MAPKAEKKPAEKKPAAEEKK-----AEKKPRAEKKLPKDA---ADKKKKRSKKSVETYKI 60
           MAPKAEKKPAEKKP  E+ K     AEKKP+A KKLPK+A    DKKKK  KKSVETYKI
Sbjct: 1   MAPKAEKKPAEKKPVEEKSKAEKAPAEKKPKAGKKLPKEAGAGGDKKKKMKKKSVETYKI 60

Query: 61  YIFKVLKQVHPDIGISSKAMGIMNSFINDIFEKLAQESSKLARYNKKPTITSREIQTAVR 120
           YIFKVLKQVHPDIGISSKAMGIMNSFINDIFEKLA ESSKLARYNKKPTITSREIQTAVR
Sbjct: 61  YIFKVLKQVHPDIGISSKAMGIMNSFINDIFEKLASESSKLARYNKKPTITSREIQTAVR 120

Query: 121 LVLPGELAKHAVSEGTKAVTKFTSS 138
           LVLPGELAKHAVSEGTKAVTKFTSS
Sbjct: 121 LVLPGELAKHAVSEGTKAVTKFTSS 145

[Close]

BLAST of MC03g0377 vs. TAIR 10
Match: AT5G59910.1 (Histone superfamily protein )

HSP 1 Score: 211.5 bits (537), Expect = 4.4e-55
Identity = 127/150 (84.67%), Postives = 131/150 (87.33%), Query Frame = 0


Query: 1   MAPKAEKKPAEKKPA----------AEEKKAEKKPRAEKKLPKDA---ADKKKKRSKKSV 60
           MAPKAEKKPAEKKPA          AE+  AEKKP+A KKLPK+A    DKKKK  KKSV
Sbjct: 1   MAPKAEKKPAEKKPASEKPVEEKSKAEKAPAEKKPKAGKKLPKEAGAGGDKKKKMKKKSV 60

Query: 61  ETYKIYIFKVLKQVHPDIGISSKAMGIMNSFINDIFEKLAQESSKLARYNKKPTITSREI 120
           ETYKIYIFKVLKQVHPDIGISSKAMGIMNSFINDIFEKLAQE+SKLARYNKKPTITSREI
Sbjct: 61  ETYKIYIFKVLKQVHPDIGISSKAMGIMNSFINDIFEKLAQEASKLARYNKKPTITSREI 120

Query: 121 QTAVRLVLPGELAKHAVSEGTKAVTKFTSS 138
           QTAVRLVLPGELAKHAVSEGTKAVTKFTSS
Sbjct: 121 QTAVRLVLPGELAKHAVSEGTKAVTKFTSS 150

[Close]

BLAST of MC03g0377 vs. TAIR 10
Match: AT3G45980.1 (Histone superfamily protein )

HSP 1 Score: 209.9 bits (533), Expect = 1.3e-54
Identity = 128/150 (85.33%), Postives = 132/150 (88.00%), Query Frame = 0


Query: 1   MAPKAEKKPAEKKPAAE---EKK-------AEKKPRAEKKLPKDA---ADKKKKRSKKSV 60
           MAP+AEKKPAEKKPAAE   E+K       AEKKP+A KKLPK+A    DKKKK  KKSV
Sbjct: 1   MAPRAEKKPAEKKPAAEKPVEEKSKAEKAPAEKKPKAGKKLPKEAGAGGDKKKKMKKKSV 60

Query: 61  ETYKIYIFKVLKQVHPDIGISSKAMGIMNSFINDIFEKLAQESSKLARYNKKPTITSREI 120
           ETYKIYIFKVLKQVHPDIGISSKAMGIMNSFINDIFEKLA ESSKLARYNKKPTITSREI
Sbjct: 61  ETYKIYIFKVLKQVHPDIGISSKAMGIMNSFINDIFEKLASESSKLARYNKKPTITSREI 120

Query: 121 QTAVRLVLPGELAKHAVSEGTKAVTKFTSS 138
           QTAVRLVLPGELAKHAVSEGTKAVTKFTSS
Sbjct: 121 QTAVRLVLPGELAKHAVSEGTKAVTKFTSS 150

[Close]

BLAST of MC03g0377 vs. TAIR 10
Match: AT2G28720.1 (Histone superfamily protein )

HSP 1 Score: 207.2 bits (526), Expect = 8.3e-54
Identity = 127/151 (84.11%), Postives = 132/151 (87.42%), Query Frame = 0


Query: 1   MAPKAEKKPAEKKPA----AEEKK------AEKKPRAEKKLPKDA----ADKKKKRSKKS 60
           MAPKA KKPAEKKPA    AEE+K      AEKKP+A KKLPK+A     +KKKKR KKS
Sbjct: 1   MAPKAGKKPAEKKPAEKAPAEEEKVAEKAPAEKKPKAGKKLPKEAVTGGVEKKKKRVKKS 60

Query: 61  VETYKIYIFKVLKQVHPDIGISSKAMGIMNSFINDIFEKLAQESSKLARYNKKPTITSRE 120
            ETYKIYIFKVLKQVHPDIGISSKAMGIMNSFINDIFEKLAQE+SKLARYNKKPTITSRE
Sbjct: 61  TETYKIYIFKVLKQVHPDIGISSKAMGIMNSFINDIFEKLAQEASKLARYNKKPTITSRE 120

Query: 121 IQTAVRLVLPGELAKHAVSEGTKAVTKFTSS 138
           IQTAVRLVLPGELAKHAVSEGTKAVTKFTSS
Sbjct: 121 IQTAVRLVLPGELAKHAVSEGTKAVTKFTSS 151

The following BLAST results are available for this feature:

BLAST of MC03g0377 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
O65818	4.3e-55	89.36	Histone H2B.2 OS=Solanum lycopersicum OX=4081 GN=H2B-2 PE=2 SV=2	[more]
O65819	1.2e-54	91.11	Histone H2B.3 (Fragment) OS=Solanum lycopersicum OX=4081 GN=H2B-3 PE=2 SV=1	[more]
O22582	1.6e-54	86.39	Histone H2B OS=Gossypium hirsutum OX=3635 GN=HIS2B PE=2 SV=3	[more]
Q9LQQ4	4.7e-54	85.81	Histone H2B.1 OS=Arabidopsis thaliana OX=3702 GN=At1g07790 PE=1 SV=3	[more]
O65821	4.7e-54	88.73	Histone H2B.1 OS=Solanum lycopersicum OX=4081 GN=H2B-1 PE=2 SV=4	[more]

BLAST of MC03g0377 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022152940.1	2.21e-81	100.00	histone H2B.2 [Momordica charantia]	[more]
XP_022152883.1	7.18e-79	96.48	histone H2B.7 [Momordica charantia]	[more]
XP_022964661.1	2.92e-78	95.07	histone H2B.7-like [Cucurbita moschata] >XP_022970348.1 histone H2B.7-like [Cucu...	[more]
XP_004139453.1	8.38e-78	94.37	histone H2B.7 [Cucumis sativus] >KGN64858.1 hypothetical protein Csa_022751 [Cuc...	[more]
XP_038893815.1	8.38e-78	94.37	histone H2B.7-like [Benincasa hispida] >XP_038894882.1 histone H2B.7-like [Benin...	[more]

BLAST of MC03g0377 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1DFD0	1.07e-81	100.00	Histone H2B OS=Momordica charantia OX=3673 GN=LOC111020552 PE=3 SV=1	[more]
A0A6J1DG30	3.48e-79	96.48	Histone H2B OS=Momordica charantia OX=3673 GN=LOC111020509 PE=3 SV=1	[more]
A0A6J1I3M0	1.42e-78	95.07	Histone H2B OS=Cucurbita maxima OX=3661 GN=LOC111469340 PE=3 SV=1	[more]
A0A6J1HJK3	1.42e-78	95.07	Histone H2B OS=Cucurbita moschata OX=3662 GN=LOC111464672 PE=3 SV=1	[more]
A0A0A0LV55	4.06e-78	94.37	Histone H2B OS=Cucumis sativus OX=3659 GN=Csa_1G132130 PE=3 SV=1	[more]

BLAST of MC03g0377 vs. TAIR 10


Match Name	E-value	Identity	Description
AT1G07790.1	3.4e-55	85.81	Histone superfamily protein	[more]
AT3G46030.1	3.4e-55	86.90	Histone superfamily protein	[more]
AT5G59910.1	4.4e-55	84.67	Histone superfamily protein	[more]
AT3G45980.1	1.3e-54	85.33	Histone superfamily protein	[more]
AT2G28720.1	8.3e-54	84.11	Histone superfamily protein	[more]

InterPro

Analysis Name: InterPro Annotations of Bitter gourd (Dali-11) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR000558	Histone H2B	PRINTS	PR00621	HISTONEH2B	coord: 121..134 score: 92.65 coord: 50..68 score: 80.55 coord: 108..121 score: 92.45 coord: 91..108 score: 76.51 coord: 69..89 score: 75.74
IPR000558	Histone H2B	SMART	SM00427	h2b3	coord: 40..136 e-value: 2.5E-73 score: 259.6
IPR000558	Histone H2B	PANTHER	PTHR23428	HISTONE H2B	coord: 3..137
IPR000558	Histone H2B	PROSITE	PS00357	HISTONE_H2B	coord: 105..127
IPR009072	Histone-fold	GENE3D	1.10.20.10	Histone, subunit A	coord: 2..137 e-value: 4.8E-60 score: 203.1
IPR009072	Histone-fold	SUPERFAMILY	47113	Histone-fold	coord: 22..137
IPR007125	Histone H2A/H2B/H3	PFAM	PF00125	Histone	coord: 7..113 e-value: 8.4E-23 score: 81.2
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..46
None	No IPR available	PANTHER	PTHR23428:SF275	HISTONE H2B	coord: 3..137

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
MC03g0377.1	MC03g0377.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006334	nucleosome assembly
cellular_component	GO:0000786	nucleosome
cellular_component	GO:0005634	nucleus
molecular_function	GO:0003677	DNA binding
molecular_function	GO:0046982	protein heterodimerization activity