MC03g0222 (gene) Bitter gourd (Dali-11) v1

Overview


Name	MC03g0222
Type	gene
Organism	Momordica charantia cv. Dali-11 (Bitter gourd (Dali-11) v1)
Description	Unknown protein
Location	MC03: 5464132 .. 5464542 (+)
RNA-Seq Expression	MC03g0222
Synteny	MC03g0222

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGCTCGAATGCTTACTTTCCTGTTCTGTCTCTCTTCCTTGACGTTTCTTTATGTTGCCCAAGCAGAAGGCAGAGCCCCTCATGGGTTGGTATACGAGAGCCCAGTCGCGTTCTCTCCAATGGCATATGATTTCTTTCATCCAAGCACCCAGGATTCTAATGCCAAAGACCCATGTGCTGCATCCAAATGCTCCCCCCTACCCCTTGCAGCCCAAGTGAAATCTACTCCTGCACAAGAAAGCAAATACTCCACAACAGTCCAAAAAGGCAAGCACCGACTTGAGGCTGGTGGGATTCTGGGGATTGTGTTTGGCATCACGTTTGCTGTGTTTTTGGCAATGGGGGTCTACTATGTGTTACGAATCCGCCAAGCCAACGCAAACCGAGCAATTTCTGCACAACCAGGCGCT

mRNA sequence

ATGGCTCGAATGCTTACTTTCCTGTTCTGTCTCTCTTCCTTGACGTTTCTTTATGTTGCCCAAGCAGAAGGCAGAGCCCCTCATGGGTTGGTATACGAGAGCCCAGTCGCGTTCTCTCCAATGGCATATGATTTCTTTCATCCAAGCACCCAGGATTCTAATGCCAAAGACCCATGTGCTGCATCCAAATGCTCCCCCCTACCCCTTGCAGCCCAAGTGAAATCTACTCCTGCACAAGAAAGCAAATACTCCACAACAGTCCAAAAAGGCAAGCACCGACTTGAGGCTGGTGGGATTCTGGGGATTGTGTTTGGCATCACGTTTGCTGTGTTTTTGGCAATGGGGGTCTACTATGTGTTACGAATCCGCCAAGCCAACGCAAACCGAGCAATTTCTGCACAACCAGGCGCT

Coding sequence (CDS)

ATGGCTCGAATGCTTACTTTCCTGTTCTGTCTCTCTTCCTTGACGTTTCTTTATGTTGCCCAAGCAGAAGGCAGAGCCCCTCATGGGTTGGTATACGAGAGCCCAGTCGCGTTCTCTCCAATGGCATATGATTTCTTTCATCCAAGCACCCAGGATTCTAATGCCAAAGACCCATGTGCTGCATCCAAATGCTCCCCCCTACCCCTTGCAGCCCAAGTGAAATCTACTCCTGCACAAGAAAGCAAATACTCCACAACAGTCCAAAAAGGCAAGCACCGACTTGAGGCTGGTGGGATTCTGGGGATTGTGTTTGGCATCACGTTTGCTGTGTTTTTGGCAATGGGGGTCTACTATGTGTTACGAATCCGCCAAGCCAACGCAAACCGAGCAATTTCTGCACAACCAGGCGCT

Protein sequence

MARMLTFLFCLSSLTFLYVAQAEGRAPHGLVYESPVAFSPMAYDFFHPSTQDSNAKDPCAASKCSPLPLAAQVKSTPAQESKYSTTVQKGKHRLEAGGILGIVFGITFAVFLAMGVYYVLRIRQANANRAISAQPGA

Homology

[Close]

BLAST of MC03g0222 vs. NCBI nr
Match: KAG7019217.1 (hypothetical protein SDJN02_18175, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 236 bits (603), Expect = 7.10e-78
Identity = 119/135 (88.15%), Postives = 126/135 (93.33%), Query Frame = 0


Query: 1   MARMLTFLFCLSSLTFLYVAQAEGRAPHGLVYESPVAFSPMAYDFFHPSTQDSNAKDPCA 60
           M +MLTFLFCLSS TFL +AQAEGRAPHGLVYESPVAFSPMAYDFFHPSTQ  NAKDPC 
Sbjct: 1   MTQMLTFLFCLSSFTFLSIAQAEGRAPHGLVYESPVAFSPMAYDFFHPSTQTPNAKDPCG 60

Query: 61  ASKCSPLPLAAQVKSTPAQESKYSTTVQKGKHRLEAGGILGIVFGITFAVFLAMGVYYVL 120
           ASKCSPLPLAAQV+STPA+ESKYSTT+QKG HR+ AGGILGIVFGITFAVFLAMGVYYVL
Sbjct: 61  ASKCSPLPLAAQVQSTPAKESKYSTTIQKGTHRVGAGGILGIVFGITFAVFLAMGVYYVL 120

Query: 121 RIRQANANRAISAQP 135
           R RQANANRA+SAQP
Sbjct: 121 RTRQANANRAMSAQP 135

[Close]

BLAST of MC03g0222 vs. NCBI nr
Match: KAG6583459.1 (hypothetical protein SDJN03_19391, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 234 bits (597), Expect = 5.83e-77
Identity = 118/135 (87.41%), Postives = 125/135 (92.59%), Query Frame = 0


Query: 1   MARMLTFLFCLSSLTFLYVAQAEGRAPHGLVYESPVAFSPMAYDFFHPSTQDSNAKDPCA 60
           M +MLTFLFCLSS TFL +AQAEGRAPHGLVYESPVAFSPMAYDFFHPSTQ  NAKDPC 
Sbjct: 1   MTQMLTFLFCLSSFTFLSIAQAEGRAPHGLVYESPVAFSPMAYDFFHPSTQTPNAKDPCG 60

Query: 61  ASKCSPLPLAAQVKSTPAQESKYSTTVQKGKHRLEAGGILGIVFGITFAVFLAMGVYYVL 120
           ASKCSPLPLAAQV+STPA+ESKYSTT+QKG HR+ AGGILGIVFGITFAV LAMGVYYVL
Sbjct: 61  ASKCSPLPLAAQVQSTPAKESKYSTTIQKGTHRVGAGGILGIVFGITFAVLLAMGVYYVL 120

Query: 121 RIRQANANRAISAQP 135
           R RQANANRA+SAQP
Sbjct: 121 RTRQANANRAMSAQP 135

[Close]

BLAST of MC03g0222 vs. NCBI nr
Match: XP_022158643.1 (uncharacterized protein LOC111025099 [Momordica charantia])

HSP 1 Score: 231 bits (589), Expect = 9.67e-76
Identity = 117/137 (85.40%), Postives = 126/137 (91.97%), Query Frame = 0


Query: 1   MARMLTFLFCLSSLTFLYVAQAEGRAPHGLVYESPVAFSPMAYDFFHPSTQDSNAKDPCA 60
           M +MLTFLFCLSS TFL VA+AEGRAPHGLVYESP+AFSPMAYDFFHPS Q+SNAKDPCA
Sbjct: 1   MTQMLTFLFCLSSSTFLSVARAEGRAPHGLVYESPLAFSPMAYDFFHPSAQNSNAKDPCA 60

Query: 61  ASKCSPLPLAAQVKSTPAQESKYSTTVQKGKHRLEAGGILGIVFGITFAVFLAMGVYYVL 120
           ASKCSPLPLAAQV+STPAQ+SKYST VQKG+H L AGG+LGIV GI FAVFLAMGVYYVL
Sbjct: 61  ASKCSPLPLAAQVQSTPAQQSKYSTAVQKGEHGLGAGGVLGIVLGIMFAVFLAMGVYYVL 120

Query: 121 RIRQANANRAISAQPGA 137
           R RQANANRA+S QPGA
Sbjct: 121 RTRQANANRAMSTQPGA 137

[Close]

BLAST of MC03g0222 vs. NCBI nr
Match: XP_008457527.1 (PREDICTED: uncharacterized protein LOC103497198 [Cucumis melo] >KAA0033889.1 uncharacterized protein E6C27_scaffold43059G00740 [Cucumis melo var. makuwa] >TYK01273.1 uncharacterized protein E5676_scaffold49G00600 [Cucumis melo var. makuwa])

HSP 1 Score: 228 bits (580), Expect = 2.35e-74
Identity = 117/138 (84.78%), Postives = 125/138 (90.58%), Query Frame = 0


Query: 1   MARMLTFLFCLSSLTFLYVAQAEGRAPHGLVYESPVAFSPMAYDFFHPSTQDSNAKDPCA 60
           M RMLTFLFCLSS TFL VA+A+GRAPHGLVYESPVAFSPMAYDFFHPSTQ+ N KDPC 
Sbjct: 1   MTRMLTFLFCLSSFTFLSVARADGRAPHGLVYESPVAFSPMAYDFFHPSTQNPNGKDPCG 60

Query: 61  ASKCSPLPLAAQVKSTPAQESKYSTTVQKGKHRLEAGGILGIVFGITFAVFLAMGVYYVL 120
            SKCSPLPLAAQV+STPA+ESKYSTT+Q  KHR+ AGGILGIVFGITFAVFLAMGVYYVL
Sbjct: 61  DSKCSPLPLAAQVQSTPARESKYSTTIQNSKHRVGAGGILGIVFGITFAVFLAMGVYYVL 120

Query: 121 RIRQANANRAISA-QPGA 137
           R RQANANRA+SA QP A
Sbjct: 121 RTRQANANRAMSAAQPSA 138

[Close]

BLAST of MC03g0222 vs. NCBI nr
Match: XP_011657962.2 (uncharacterized protein LOC105435923 [Cucumis sativus] >KGN66040.2 hypothetical protein Csa_020080 [Cucumis sativus])

HSP 1 Score: 222 bits (566), Expect = 3.20e-72
Identity = 113/138 (81.88%), Postives = 123/138 (89.13%), Query Frame = 0


Query: 1   MARMLTFLFCLSSLTFLYVAQAEGRAPHGLVYESPVAFSPMAYDFFHPSTQDSNAKDPCA 60
           M RMLTFLFCL+S TFL +AQA+GRAPHGLVYESPVAFSPMAYDFFHPSTQ+ + KDPC 
Sbjct: 1   MTRMLTFLFCLASFTFLSIAQADGRAPHGLVYESPVAFSPMAYDFFHPSTQNPSGKDPCG 60

Query: 61  ASKCSPLPLAAQVKSTPAQESKYSTTVQKGKHRLEAGGILGIVFGITFAVFLAMGVYYVL 120
            SKCSPLPLAAQV+STPA+ESKYSTT+Q   HR+ AGGILGIVFGITFAVFL MGVYYVL
Sbjct: 61  DSKCSPLPLAAQVQSTPAKESKYSTTIQNSNHRVGAGGILGIVFGITFAVFLTMGVYYVL 120

Query: 121 RIRQANANRAISA-QPGA 137
           R RQANANRA+SA QP A
Sbjct: 121 RTRQANANRAMSAAQPSA 138

[Close]

BLAST of MC03g0222 vs. ExPASy TrEMBL
Match: A0A6J1DWP3 (uncharacterized protein LOC111025099 OS=Momordica charantia OX=3673 GN=LOC111025099 PE=4 SV=1)

HSP 1 Score: 231 bits (589), Expect = 4.68e-76
Identity = 117/137 (85.40%), Postives = 126/137 (91.97%), Query Frame = 0


Query: 1   MARMLTFLFCLSSLTFLYVAQAEGRAPHGLVYESPVAFSPMAYDFFHPSTQDSNAKDPCA 60
           M +MLTFLFCLSS TFL VA+AEGRAPHGLVYESP+AFSPMAYDFFHPS Q+SNAKDPCA
Sbjct: 1   MTQMLTFLFCLSSSTFLSVARAEGRAPHGLVYESPLAFSPMAYDFFHPSAQNSNAKDPCA 60

Query: 61  ASKCSPLPLAAQVKSTPAQESKYSTTVQKGKHRLEAGGILGIVFGITFAVFLAMGVYYVL 120
           ASKCSPLPLAAQV+STPAQ+SKYST VQKG+H L AGG+LGIV GI FAVFLAMGVYYVL
Sbjct: 61  ASKCSPLPLAAQVQSTPAQQSKYSTAVQKGEHGLGAGGVLGIVLGIMFAVFLAMGVYYVL 120

Query: 121 RIRQANANRAISAQPGA 137
           R RQANANRA+S QPGA
Sbjct: 121 RTRQANANRAMSTQPGA 137

[Close]

BLAST of MC03g0222 vs. ExPASy TrEMBL
Match: A0A5A7SXJ1 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold49G00600 PE=4 SV=1)

HSP 1 Score: 228 bits (580), Expect = 1.14e-74
Identity = 117/138 (84.78%), Postives = 125/138 (90.58%), Query Frame = 0


Query: 1   MARMLTFLFCLSSLTFLYVAQAEGRAPHGLVYESPVAFSPMAYDFFHPSTQDSNAKDPCA 60
           M RMLTFLFCLSS TFL VA+A+GRAPHGLVYESPVAFSPMAYDFFHPSTQ+ N KDPC 
Sbjct: 1   MTRMLTFLFCLSSFTFLSVARADGRAPHGLVYESPVAFSPMAYDFFHPSTQNPNGKDPCG 60

Query: 61  ASKCSPLPLAAQVKSTPAQESKYSTTVQKGKHRLEAGGILGIVFGITFAVFLAMGVYYVL 120
            SKCSPLPLAAQV+STPA+ESKYSTT+Q  KHR+ AGGILGIVFGITFAVFLAMGVYYVL
Sbjct: 61  DSKCSPLPLAAQVQSTPARESKYSTTIQNSKHRVGAGGILGIVFGITFAVFLAMGVYYVL 120

Query: 121 RIRQANANRAISA-QPGA 137
           R RQANANRA+SA QP A
Sbjct: 121 RTRQANANRAMSAAQPSA 138

[Close]

BLAST of MC03g0222 vs. ExPASy TrEMBL
Match: A0A1S3C6E2 (uncharacterized protein LOC103497198 OS=Cucumis melo OX=3656 GN=LOC103497198 PE=4 SV=1)

HSP 1 Score: 228 bits (580), Expect = 1.14e-74
Identity = 117/138 (84.78%), Postives = 125/138 (90.58%), Query Frame = 0


Query: 1   MARMLTFLFCLSSLTFLYVAQAEGRAPHGLVYESPVAFSPMAYDFFHPSTQDSNAKDPCA 60
           M RMLTFLFCLSS TFL VA+A+GRAPHGLVYESPVAFSPMAYDFFHPSTQ+ N KDPC 
Sbjct: 1   MTRMLTFLFCLSSFTFLSVARADGRAPHGLVYESPVAFSPMAYDFFHPSTQNPNGKDPCG 60

Query: 61  ASKCSPLPLAAQVKSTPAQESKYSTTVQKGKHRLEAGGILGIVFGITFAVFLAMGVYYVL 120
            SKCSPLPLAAQV+STPA+ESKYSTT+Q  KHR+ AGGILGIVFGITFAVFLAMGVYYVL
Sbjct: 61  DSKCSPLPLAAQVQSTPARESKYSTTIQNSKHRVGAGGILGIVFGITFAVFLAMGVYYVL 120

Query: 121 RIRQANANRAISA-QPGA 137
           R RQANANRA+SA QP A
Sbjct: 121 RTRQANANRAMSAAQPSA 138

[Close]

BLAST of MC03g0222 vs. ExPASy TrEMBL
Match: A0A0A0LV85 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G495260 PE=4 SV=1)

HSP 1 Score: 221 bits (562), Expect = 6.32e-72
Identity = 112/138 (81.16%), Postives = 123/138 (89.13%), Query Frame = 0


Query: 1   MARMLTFLFCLSSLTFLYVAQAEGRAPHGLVYESPVAFSPMAYDFFHPSTQDSNAKDPCA 60
           M RMLTFLFCL+S TFL +A+A+GRAPHGLVYESPVAFSPMAYDFFHPSTQ+ + KDPC 
Sbjct: 1   MTRMLTFLFCLASFTFLSIARADGRAPHGLVYESPVAFSPMAYDFFHPSTQNPSGKDPCG 60

Query: 61  ASKCSPLPLAAQVKSTPAQESKYSTTVQKGKHRLEAGGILGIVFGITFAVFLAMGVYYVL 120
            SKCSPLPLAAQV+STPA+ESKYSTT+Q   HR+ AGGILGIVFGITFAVFL MGVYYVL
Sbjct: 61  DSKCSPLPLAAQVQSTPAKESKYSTTIQSSNHRVGAGGILGIVFGITFAVFLTMGVYYVL 120

Query: 121 RIRQANANRAISA-QPGA 137
           R RQANANRA+SA QP A
Sbjct: 121 RTRQANANRAMSAAQPSA 138

[Close]

BLAST of MC03g0222 vs. ExPASy TrEMBL
Match: A0A6J1KCV5 (uncharacterized protein LOC111493157 OS=Cucurbita maxima OX=3661 GN=LOC111493157 PE=4 SV=1)

HSP 1 Score: 205 bits (522), Expect = 6.90e-66
Identity = 107/137 (78.10%), Postives = 116/137 (84.67%), Query Frame = 0


Query: 1   MARMLTFLFCLSSLTFLYVAQAEGRAPHGLVYESPVAFSPMAYDFFHPSTQDSNAKDPCA 60
           MA+ LTFLF LSS TFL    AEGRAPHGL YE+PVAFSPMAYDFFHP T+  NA+DPC 
Sbjct: 1   MAKTLTFLFYLSSFTFLSAVHAEGRAPHGLAYENPVAFSPMAYDFFHPRTRSPNAEDPCG 60

Query: 61  ASKCSPLPLAAQVKSTPAQESKYSTTVQKGKHRLEAGGILGIVFGITFAVFLAMGVYYVL 120
           ASKCSPLPLAAQ++S PAQESKYSTT QKG+     GGILGIVFGITFAVFLAMGVYYVL
Sbjct: 61  ASKCSPLPLAAQLQSNPAQESKYSTTTQKGEG---VGGILGIVFGITFAVFLAMGVYYVL 120

Query: 121 RIRQANANRAISAQPGA 137
           R R ANANRA+SA+PGA
Sbjct: 121 RTRLANANRAMSAKPGA 134

[Close]

BLAST of MC03g0222 vs. TAIR 10
Match: AT2G28410.1 (unknown protein; Has 18 Blast hits to 18 proteins in 5 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 18; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). )

HSP 1 Score: 89.7 bits (221), Expect = 1.9e-18
Identity = 51/115 (44.35%), Postives = 71/115 (61.74%), Query Frame = 0


Query: 1   MARMLTFLFCLSSLTFLYVAQAEGRAPHGLVYESPVAFSPMAYDFFHPSTQDSNAK-DPC 60
           M      +F  SSL     A A+ RAPHGL YE+PVAFSP A+DFFH   ++ +   +PC
Sbjct: 1   MTSKTCLVFFFSSLILTNFALAQDRAPHGLAYETPVAFSPSAFDFFHTQPENPDPTFNPC 60

Query: 61  AASKCSPLPLAAQVK--STPAQESKYSTTVQKGKHRLEAGGILGIVFGITFAVFL 113
           + S CSPLP+AA+V+  S  AQES   +     +  +E  G++GI+FG+ FAV +
Sbjct: 61  SESGCSPLPVAAKVQGASAKAQESDIVSISTGTRSGIEEHGVVGIIFGLAFAVMM 115

[Close]

BLAST of MC03g0222 vs. TAIR 10
Match: AT5G60650.1 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT2G28410.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). )

HSP 1 Score: 78.2 bits (191), Expect = 5.8e-15
Identity = 51/136 (37.50%), Postives = 74/136 (54.41%), Query Frame = 0


Query: 4   MLTFLFCLSSLTFLYVAQAEGRAPHGLVYESPVAFSPMAYDFFHPSTQDSNAKDPCAAS- 63
           +L F  CLS L  L V+ A  R  HG  Y +P AFSP AYDFFHP +  S+  +P  +S 
Sbjct: 8   LLFFFSCLSML--LCVSIAGSRPVHGPAYTNPSAFSPQAYDFFHPKSSLSDHNNPPKSSP 67

Query: 64  ---KCSPLPLAAQVKSTPAQESKYS----TTVQKGKHRLEAGGILGIVFGITFAVFLAMG 123
                SP P    +    +Q SK S    TT +  +     G  +G+V G++F  FL++G
Sbjct: 68  SPLSLSPSPSKTSIVEPDSQGSKVSSDEHTTSESRREEEGRGETIGVVLGLSFIAFLSLG 127

Query: 124 VYYVLRIRQANANRAI 132
           +Y+V++ ++AN  R I
Sbjct: 128 IYFVIKKQRANIIRTI 141

The following BLAST results are available for this feature:

BLAST of MC03g0222 vs.


Match Name	E-value	Identity	Description

BLAST of MC03g0222 vs. NCBI nr


Match Name	E-value	Identity	Description
KAG7019217.1	7.10e-78	88.15	hypothetical protein SDJN02_18175, partial [Cucurbita argyrosperma subsp. argyro...	[more]
KAG6583459.1	5.83e-77	87.41	hypothetical protein SDJN03_19391, partial [Cucurbita argyrosperma subsp. sorori...	[more]
XP_022158643.1	9.67e-76	85.40	uncharacterized protein LOC111025099 [Momordica charantia]	[more]
XP_008457527.1	2.35e-74	84.78	PREDICTED: uncharacterized protein LOC103497198 [Cucumis melo] >KAA0033889.1 unc...	[more]
XP_011657962.2	3.20e-72	81.88	uncharacterized protein LOC105435923 [Cucumis sativus] >KGN66040.2 hypothetical ...	[more]

BLAST of MC03g0222 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1DWP3	4.68e-76	85.40	uncharacterized protein LOC111025099 OS=Momordica charantia OX=3673 GN=LOC111025...	[more]
A0A5A7SXJ1	1.14e-74	84.78	Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold...	[more]
A0A1S3C6E2	1.14e-74	84.78	uncharacterized protein LOC103497198 OS=Cucumis melo OX=3656 GN=LOC103497198 PE=...	[more]
A0A0A0LV85	6.32e-72	81.16	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G495260 PE=4 SV=1	[more]
A0A6J1KCV5	6.90e-66	78.10	uncharacterized protein LOC111493157 OS=Cucurbita maxima OX=3661 GN=LOC111493157...	[more]

BLAST of MC03g0222 vs. TAIR 10


Match Name	E-value	Identity	Description
AT2G28410.1	1.9e-18	44.35	unknown protein; Has 18 Blast hits to 18 proteins in 5 species: Archae - 0; Bact...	[more]
AT5G60650.1	5.8e-15	37.50	unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biologic...	[more]

InterPro

Analysis Name: InterPro Annotations of Bitter gourd (Dali-11) v1
Date Performed: 2021-10-25

Position :

Zoom :

x 1


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	PANTHER	PTHR35718	EXPRESSED PROTEIN	coord: 1..135

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
MC03g0222.1	MC03g0222.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
cellular_component	GO:0016021	integral component of membrane