MC03g0211 (gene) Bitter gourd (Dali-11) v1

Overview
NameMC03g0211
Typegene
OrganismMomordica charantia cv. Dali-11 (Bitter gourd (Dali-11) v1)
DescriptionUnknown protein
LocationMC03: 4358844 .. 4359011 (+)
RNA-Seq ExpressionMC03g0211
SyntenyMC03g0211
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
CTATCTACACGTGGAGCCCGGACGTTCGTGCCAGCATACTTAAAGCCAGAAGCAAATGTTTGGCACCATCTCCTAAATAGTAAGCTAACGCCAACAACCCTTGATGCATCAATCATGAAGGAGAGGGTTTTGCTTCTGTTCTGCATAATGGGAGGACTCAACATTGAC

mRNA sequence

CTATCTACACGTGGAGCCCGGACGTTCGTGCCAGCATACTTAAAGCCAGAAGCAAATGTTTGGCACCATCTCCTAAATAGTAAGCTAACGCCAACAACCCTTGATGCATCAATCATGAAGGAGAGGGTTTTGCTTCTGTTCTGCATAATGGGAGGACTCAACATTGAC

Coding sequence (CDS)

CTATCTACACGTGGAGCCCGGACGTTCGTGCCAGCATACTTAAAGCCAGAAGCAAATGTTTGGCACCATCTCCTAAATAGTAAGCTAACGCCAACAACCCTTGATGCATCAATCATGAAGGAGAGGGTTTTGCTTCTGTTCTGCATAATGGGAGGACTCAACATTGAC

Protein sequence

LSTRGARTFVPAYLKPEANVWHHLLNSKLTPTTLDASIMKERVLLLFCIMGGLNID
Homology
BLAST of MC03g0211 vs. NCBI nr
Match: PON62892.1 (hypothetical protein PanWU01x14_135680 [Parasponia andersonii])

HSP 1 Score: 53.1 bits (126), Expect = 2.44e-06
Identity = 25/56 (44.64%), Postives = 39/56 (69.64%), Query Frame = 0

Query: 1   LSTRGARTFVPAYLKPEANVWHHLLNSKLTPTTLDASIMKERVLLLFCIMGGLNID 56
           +S++GA T + + L P A VW+H L S+L PTT   ++ KERVLLL+ ++ G +I+
Sbjct: 64  VSSQGAYTCLRSSLNPPAKVWYHFLKSRLLPTTHGKTVSKERVLLLYSMLTGKSIN 119

BLAST of MC03g0211 vs. NCBI nr
Match: PON71279.1 (hypothetical protein PanWU01x14_074190, partial [Parasponia andersonii])

HSP 1 Score: 50.4 bits (119), Expect = 6.70e-06
Identity = 24/56 (42.86%), Postives = 38/56 (67.86%), Query Frame = 0

Query: 1  LSTRGARTFVPAYLKPEANVWHHLLNSKLTPTTLDASIMKERVLLLFCIMGGLNID 56
          +S++ A   + + L P ANVW+H L S+L PTT   ++ KERVLLL+ ++ G +I+
Sbjct: 21 VSSQDAYICLRSSLNPPANVWYHFLKSRLLPTTHGKTVSKERVLLLYSMLTGKSIN 76

BLAST of MC03g0211 vs. NCBI nr
Match: PON50458.1 (hypothetical protein PanWU01x14_223230, partial [Parasponia andersonii])

HSP 1 Score: 50.1 bits (118), Expect = 3.42e-05
Identity = 23/56 (41.07%), Postives = 37/56 (66.07%), Query Frame = 0

Query: 1   LSTRGARTFVPAYLKPEANVWHHLLNSKLTPTTLDASIMKERVLLLFCIMGGLNID 56
           +S++G  T + + L P A +W+H L S+L PTT    + KERVLLL+ ++ G +I+
Sbjct: 74  VSSQGVYTCLRSSLNPPAKIWYHFLKSRLLPTTHGKIVSKERVLLLYSMLTGKSIN 129

BLAST of MC03g0211 vs. NCBI nr
Match: PON44141.1 (hypothetical protein PanWU01x14_268850 [Parasponia andersonii])

HSP 1 Score: 49.7 bits (117), Expect = 4.01e-05
Identity = 24/56 (42.86%), Postives = 36/56 (64.29%), Query Frame = 0

Query: 1   LSTRGARTFVPAYLKPEANVWHHLLNSKLTPTTLDASIMKERVLLLFCIMGGLNID 56
           +S +GA  ++ + L P A VW+H L S L PTT    + KERVLLL+ ++ G +I+
Sbjct: 105 VSFQGAYIYLRSSLNPHAKVWYHFLKSHLLPTTHGKIVSKERVLLLYSMLTGKSIN 160

BLAST of MC03g0211 vs. NCBI nr
Match: XP_024971944.1 (uncharacterized protein LOC112510826 [Cynara cardunculus var. scolymus])

HSP 1 Score: 50.1 bits (118), Expect = 4.02e-05
Identity = 22/50 (44.00%), Postives = 34/50 (68.00%), Query Frame = 0

Query: 7   RTFVPAYLKPEANVWHHLLNSKLTPTTLDASIMKERVLLLFCIMGGLNID 56
           RT+  + LKP ANVW + +   L PTT D+SI  E+++LL+C++ G  I+
Sbjct: 326 RTYRASNLKPNANVWINFIRYSLNPTTHDSSISVEKIILLYCVVTGRTIN 375

BLAST of MC03g0211 vs. ExPASy TrEMBL
Match: A0A2P5CPE8 (Uncharacterized protein OS=Parasponia andersonii OX=3476 GN=PanWU01x14_135680 PE=4 SV=1)

HSP 1 Score: 53.1 bits (126), Expect = 1.18e-06
Identity = 25/56 (44.64%), Postives = 39/56 (69.64%), Query Frame = 0

Query: 1   LSTRGARTFVPAYLKPEANVWHHLLNSKLTPTTLDASIMKERVLLLFCIMGGLNID 56
           +S++GA T + + L P A VW+H L S+L PTT   ++ KERVLLL+ ++ G +I+
Sbjct: 64  VSSQGAYTCLRSSLNPPAKVWYHFLKSRLLPTTHGKTVSKERVLLLYSMLTGKSIN 119

BLAST of MC03g0211 vs. ExPASy TrEMBL
Match: A0A2P5DDA9 (Uncharacterized protein (Fragment) OS=Parasponia andersonii OX=3476 GN=PanWU01x14_074190 PE=4 SV=1)

HSP 1 Score: 50.4 bits (119), Expect = 3.24e-06
Identity = 24/56 (42.86%), Postives = 38/56 (67.86%), Query Frame = 0

Query: 1  LSTRGARTFVPAYLKPEANVWHHLLNSKLTPTTLDASIMKERVLLLFCIMGGLNID 56
          +S++ A   + + L P ANVW+H L S+L PTT   ++ KERVLLL+ ++ G +I+
Sbjct: 21 VSSQDAYICLRSSLNPPANVWYHFLKSRLLPTTHGKTVSKERVLLLYSMLTGKSIN 76

BLAST of MC03g0211 vs. ExPASy TrEMBL
Match: A0A2P5BNT0 (Uncharacterized protein (Fragment) OS=Parasponia andersonii OX=3476 GN=PanWU01x14_223230 PE=4 SV=1)

HSP 1 Score: 50.1 bits (118), Expect = 1.66e-05
Identity = 23/56 (41.07%), Postives = 37/56 (66.07%), Query Frame = 0

Query: 1   LSTRGARTFVPAYLKPEANVWHHLLNSKLTPTTLDASIMKERVLLLFCIMGGLNID 56
           +S++G  T + + L P A +W+H L S+L PTT    + KERVLLL+ ++ G +I+
Sbjct: 74  VSSQGVYTCLRSSLNPPAKIWYHFLKSRLLPTTHGKIVSKERVLLLYSMLTGKSIN 129

BLAST of MC03g0211 vs. ExPASy TrEMBL
Match: A0A2P5B5S0 (Uncharacterized protein OS=Parasponia andersonii OX=3476 GN=PanWU01x14_268850 PE=4 SV=1)

HSP 1 Score: 49.7 bits (117), Expect = 1.94e-05
Identity = 24/56 (42.86%), Postives = 36/56 (64.29%), Query Frame = 0

Query: 1   LSTRGARTFVPAYLKPEANVWHHLLNSKLTPTTLDASIMKERVLLLFCIMGGLNID 56
           +S +GA  ++ + L P A VW+H L S L PTT    + KERVLLL+ ++ G +I+
Sbjct: 105 VSFQGAYIYLRSSLNPHAKVWYHFLKSHLLPTTHGKIVSKERVLLLYSMLTGKSIN 160

BLAST of MC03g0211 vs. ExPASy TrEMBL
Match: A0A2P5BCG4 (Uncharacterized protein (Fragment) OS=Parasponia andersonii OX=3476 GN=PanWU01x14_251180 PE=4 SV=1)

HSP 1 Score: 48.5 bits (114), Expect = 6.76e-05
Identity = 23/56 (41.07%), Postives = 37/56 (66.07%), Query Frame = 0

Query: 1   LSTRGARTFVPAYLKPEANVWHHLLNSKLTPTTLDASIMKERVLLLFCIMGGLNID 56
           +S +GA T + + L P A VW+H L S+L PTT   ++ K+R+LLL  ++ G +I+
Sbjct: 157 VSAQGAYTCIRSALTPAAKVWYHFLKSRLLPTTHGKTVSKDRMLLLHSMLIGKSIN 212

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
PON62892.12.44e-0644.64hypothetical protein PanWU01x14_135680 [Parasponia andersonii][more]
PON71279.16.70e-0642.86hypothetical protein PanWU01x14_074190, partial [Parasponia andersonii][more]
PON50458.13.42e-0541.07hypothetical protein PanWU01x14_223230, partial [Parasponia andersonii][more]
PON44141.14.01e-0542.86hypothetical protein PanWU01x14_268850 [Parasponia andersonii][more]
XP_024971944.14.02e-0544.00uncharacterized protein LOC112510826 [Cynara cardunculus var. scolymus][more]
Match NameE-valueIdentityDescription
A0A2P5CPE81.18e-0644.64Uncharacterized protein OS=Parasponia andersonii OX=3476 GN=PanWU01x14_135680 PE... [more]
A0A2P5DDA93.24e-0642.86Uncharacterized protein (Fragment) OS=Parasponia andersonii OX=3476 GN=PanWU01x1... [more]
A0A2P5BNT01.66e-0541.07Uncharacterized protein (Fragment) OS=Parasponia andersonii OX=3476 GN=PanWU01x1... [more]
A0A2P5B5S01.94e-0542.86Uncharacterized protein OS=Parasponia andersonii OX=3476 GN=PanWU01x14_268850 PE... [more]
A0A2P5BCG46.76e-0541.07Uncharacterized protein (Fragment) OS=Parasponia andersonii OX=3476 GN=PanWU01x1... [more]
Match NameE-valueIdentityDescription
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
MC03g0211.1MC03g0211.1mRNA