MC03g0198 (gene) Bitter gourd (Dali-11) v1

Overview
NameMC03g0198
Typegene
OrganismMomordica charantia cv. Dali-11 (Bitter gourd (Dali-11) v1)
Descriptionmetallothionein-like protein LSC54
LocationMC03: 3689269 .. 3689364 (-)
RNA-Seq ExpressionMC03g0198
SyntenyMC03g0198
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
GAAACAAAAATGGCTTCTGGCTGCAAATGCGGTGACAATTGCTCCTGTGGAGACAGCTGCAACTGCCAATCTGGGTCTCTCTCTCTCTCTCTCTCT

mRNA sequence

GAAACAAAAATGGCTTCTGGCTGCAAATGCGGTGACAATTGCTCCTGTGGAGACAGCTGCAACTGCCAATCTGGGTCTCTCTCTCTCTCTCTCTCT

Coding sequence (CDS)

GAAACAAAAATGGCTTCTGGCTGCAAATGCGGTGACAATTGCTCCTGTGGAGACAGCTGCAACTGCCAATCTGGGTCTCTCTCTCTCTCTCTCTCT

Protein sequence

ETKMASGCKCGDNCSCGDSCNCQSGSLSLSLS
Homology
[Close]
BLAST of MC03g0198 vs. NCBI nr
Match: XP_022997994.1 (metallothionein-like protein LSC54 [Cucurbita maxima])

HSP 1 Score: 52.4 bits (124), Expect = 1.52e-07
Identity = 22/27 (81.48%), Postives = 24/27 (88.89%), Query Frame = 0 

Query: 1  ETKMASGCKCGDNCSCGDSCNCQSGSL 27
            KM SGCKCGD+CSCGDSCNCQSGS+
Sbjct: 27 RNKMGSGCKCGDSCSCGDSCNCQSGSI 53

[Close]
BLAST of MC03g0198 vs. NCBI nr
Match: KAG7019194.1 (hypothetical protein SDJN02_18152 [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 49.3 bits (116), Expect = 1.90e-06
Identity = 21/24 (87.50%), Postives = 23/24 (95.83%), Query Frame = 0 

Query: 4  MASGCKCGDNCSCGDSCNCQSGSL 27
          MASGCKCGDNCSCGDSCNC SG++
Sbjct: 1  MASGCKCGDNCSCGDSCNCLSGTV 24

[Close]
BLAST of MC03g0198 vs. ExPASy TrEMBL
Match: A0A6J1KD42 (metallothionein-like protein LSC54 OS=Cucurbita maxima OX=3661 GN=LOC111492782 PE=4 SV=1)

HSP 1 Score: 52.4 bits (124), Expect = 7.37e-08
Identity = 22/27 (81.48%), Postives = 24/27 (88.89%), Query Frame = 0 

Query: 1  ETKMASGCKCGDNCSCGDSCNCQSGSL 27
            KM SGCKCGD+CSCGDSCNCQSGS+
Sbjct: 27 RNKMGSGCKCGDSCSCGDSCNCQSGSI 53

The following BLAST results are available for this feature:
BLAST of MC03g0198 vs.
Match NameE-valueIdentityDescription
BLAST of MC03g0198 vs. NCBI nr
Match NameE-valueIdentityDescription
XP_022997994.11.52e-0781.48metallothionein-like protein LSC54 [Cucurbita maxima][more]
KAG7019194.11.90e-0687.50hypothetical protein SDJN02_18152 [Cucurbita argyrosperma subsp. argyrosperma][more]
BLAST of MC03g0198 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
A0A6J1KD427.37e-0881.48metallothionein-like protein LSC54 OS=Cucurbita maxima OX=3661 GN=LOC111492782 P... [more]
BLAST of MC03g0198 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
MC03g0198.1MC03g0198.1mRNA