MC03g0171 (gene) Bitter gourd (Dali-11) v1

Overview


Name	MC03g0171
Type	gene
Organism	Momordica charantia cv. Dali-11 (Bitter gourd (Dali-11) v1)
Description	Unknown protein
Location	MC03: 3143636 .. 3144523 (-)
RNA-Seq Expression	MC03g0171
Synteny	MC03g0171

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSpolypeptideutr3

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGGTCAAGGGCGTGCTCGTGGCTCAAGTTTAGGACCCACTCCCACTCAAGTGTTCAAGTCTTCACCACGTCGATTTACTGGGATTGAGATTCATAATGAGGCTAATATGGAAGATTATCAAAATGTAGATGCTAGACTTTCGATATTAGAATCGAAAATGGCCAATATGCTTTCGATTTTGGTACAAAATGGTTTCATGCAAGCCAGCGGTGCAAATGGGGTGTATACAAATGGTGCTTCGCCATATTGTCAATACAAGAATCCTGGACGTGTTAGTAGCATGAGATTACGTCCCACCTCCACTCAAGTGTTCCATCGCGATATTCGTTACGAGACTAATATGGATCAAAATGTAGATGCCAGACTTTCAGTATTAGAGTCGCAAATGGCCAAGGTAGTTTCAGTTTTACGACGAAATGGTTTCATGCAAGCCAACATCTGAGCATGGTCACACACAAATGGTGTTTCAAGACAGGTATAACCCTTTTTGTGTTCTATAATCTTGTGTTATTTTCTTAGTAAATTTAACTATTATCAGGATCATGGAGGCAACTCTTGGAGTGGAATGATGTGTCGAGTTTGTGAAGTCGACCCTATCCGACCCGCGTCCTTCGTGATATTTTAACAACAGTTTGTAGTGGTAAAACATTTTTATCTAGTATCTCCAAGGTTAAATATTTTGATATTTTCTTTAGTGAATATTTTTGGGATGATATCAAGTATGTCTCACTAGAGTATTCTTCTAATTTTACCCTTTTTCTTTGTGTTAACATCTTGTGGATGGGAGTATTATTGTGCACATATATGTAAAGATATGCACTAAGAAAATGGTTTTTAAGTTTTTTTGGGGCTGTTACACACCATTTGGTAATGTTTCTTATTCTCG

mRNA sequence

ATGGGTCAAGGGCGTGCTCGTGGCTCAAGTTTAGGACCCACTCCCACTCAAGTGTTCAAGTCTTCACCACGTCGATTTACTGGGATTGAGATTCATAATGAGGCTAATATGGAAGATTATCAAAATGTAGATGCTAGACTTTCGATATTAGAATCGAAAATGGCCAATATGCTTTCGATTTTGGTACAAAATGGTTTCATGCAAGCCAGCGGTGCAAATGGGGTGTATACAAATGGTGCTTCGCCATATTGTCAATACAAGAATCCTGGACGTGTTAGTAGCATGAGATTACGTCCCACCTCCACTCAAGTGTTCCATCGCGATATTCGTTACGAGACTAATATGGATCAAAATGTAGATGCCAGACTTTCAGTATTAGAGTCGCAAATGGCCAAGGTAGTTTCAGTTTTACGACGAAATGGTTTCATGCAAGCCAACATCTGAGCATGGTCACACACAAATGGTGTTTCAAGACAGGATCATGGAGGCAACTCTTGGAGTGGAATGATGTGTCGAGTTTGTGAAGTCGACCCTATCCGACCCGCGTCCTTCGTGATATTTTAACAACAGTTTGTAGTGGTAAAACATTTTTATCTAGTATCTCCAAGGTTAAATATTTTGATATTTTCTTTAGTGAATATTTTTGGGATGATATCAAGTATGTCTCACTAGAGTATTCTTCTAATTTTACCCTTTTTCTTTGTGTTAACATCTTGTGGATGGGAGTATTATTGTGCACATATATGTAAAGATATGCACTAAGAAAATGGTTTTTAAGTTTTTTTGGGGCTGTTACACACCATTTGGTAATGTTTCTTATTCTCG

Coding sequence (CDS)

ATGGGTCAAGGGCGTGCTCGTGGCTCAAGTTTAGGACCCACTCCCACTCAAGTGTTCAAGTCTTCACCACGTCGATTTACTGGGATTGAGATTCATAATGAGGCTAATATGGAAGATTATCAAAATGTAGATGCTAGACTTTCGATATTAGAATCGAAAATGGCCAATATGCTTTCGATTTTGGTACAAAATGGTTTCATGCAAGCCAGCGGTGCAAATGGGGTGTATACAAATGGTGCTTCGCCATATTGTCAATACAAGAATCCTGGACGTGTTAGTAGCATGAGATTACGTCCCACCTCCACTCAAGTGTTCCATCGCGATATTCGTTACGAGACTAATATGGATCAAAATGTAGATGCCAGACTTTCAGTATTAGAGTCGCAAATGGCCAAGGTAGTTTCAGTTTTACGACGAAATGGTTTCATGCAAGCCAACATCTGA

Protein sequence

MGQGRARGSSLGPTPTQVFKSSPRRFTGIEIHNEANMEDYQNVDARLSILESKMANMLSILVQNGFMQASGANGVYTNGASPYCQYKNPGRVSSMRLRPTSTQVFHRDIRYETNMDQNVDARLSVLESQMAKVVSVLRRNGFMQANI

Homology

[Close]

BLAST of MC03g0171 vs. NCBI nr
Match: KGN65730.1 (hypothetical protein Csa_019939 [Cucumis sativus])

HSP 1 Score: 211 bits (537), Expect = 1.92e-67
Identity = 107/151 (70.86%), Postives = 121/151 (80.13%), Query Frame = 0


Query: 1   MGQGRARGSSLGPTPTQVFKSSPRRFTGIEIHNEANMEDYQNVDARLSILESKMANMLSI 60
           MG+GR RG  LGPT T VFKS+PR+FT  EIH+EAN+EDYQNVDARLSILE KMANM+SI
Sbjct: 1   MGKGRVRGMKLGPTSTIVFKSTPRQFTEFEIHDEANLEDYQNVDARLSILELKMANMISI 60

Query: 61  LVQNGFMQASGANGVYTNGASPYCQYKNPGRVSSMRLRPTSTQVF----HRDIRYETNMD 120
           L QNGFMQ++     +TNG  PYC YKNPGRV SMRL+P STQVF    HR+IR E  MD
Sbjct: 61  LEQNGFMQSNNPTATHTNGDLPYCIYKNPGRVCSMRLQPASTQVFRSISHRNIRNEARMD 120

Query: 121 QNVDARLSVLESQMAKVVSVLRRNGFMQANI 147
           QNVD RLS+LE+QM KVVS+LRRNG MQ NI
Sbjct: 121 QNVDTRLSILETQMTKVVSILRRNGLMQGNI 151

[Close]

BLAST of MC03g0171 vs. NCBI nr
Match: TYJ97397.1 (hypothetical protein E5676_scaffold194G002160 [Cucumis melo var. makuwa])

HSP 1 Score: 204 bits (518), Expect = 1.46e-64
Identity = 106/151 (70.20%), Postives = 119/151 (78.81%), Query Frame = 0


Query: 1   MGQGRARGSSLGPTPTQVFKSSPRRFTGIEIHNEANMEDYQNVDARLSILESKMANMLSI 60
           MG+GR RG  LGPT T VFKS+PR+FT  EIH+E N+EDYQNVDARLSILE KMANM+SI
Sbjct: 1   MGKGRVRGMKLGPTSTIVFKSTPRQFTEFEIHDEGNLEDYQNVDARLSILELKMANMISI 60

Query: 61  LVQNGFMQASGANGVYTNGASPYCQYKNPGRVSSMRLRPTSTQVF----HRDIRYETNMD 120
           L QNGFMQ++      TNG  PYC YKNPGRV SMRL+P STQVF    HR+IR E  MD
Sbjct: 61  LEQNGFMQSNNPT-ANTNGDLPYCIYKNPGRVCSMRLQPASTQVFRSISHRNIRNEARMD 120

Query: 121 QNVDARLSVLESQMAKVVSVLRRNGFMQANI 147
           QNVD RLS+LE+QM KVVS+LRRNG MQ NI
Sbjct: 121 QNVDTRLSILETQMTKVVSILRRNGLMQGNI 150

[Close]

BLAST of MC03g0171 vs. NCBI nr
Match: KAA0067747.1 (hypothetical protein E6C27_scaffold352G00670 [Cucumis melo var. makuwa])

HSP 1 Score: 204 bits (518), Expect = 2.15e-64
Identity = 106/151 (70.20%), Postives = 119/151 (78.81%), Query Frame = 0


Query: 1   MGQGRARGSSLGPTPTQVFKSSPRRFTGIEIHNEANMEDYQNVDARLSILESKMANMLSI 60
           MG+GR RG  LGPT T VFKS+PR+FT  EIH+E N+EDYQNVDARLSILE KMANM+SI
Sbjct: 13  MGKGRVRGMKLGPTSTIVFKSTPRQFTEFEIHDEGNLEDYQNVDARLSILELKMANMISI 72

Query: 61  LVQNGFMQASGANGVYTNGASPYCQYKNPGRVSSMRLRPTSTQVF----HRDIRYETNMD 120
           L QNGFMQ++      TNG  PYC YKNPGRV SMRL+P STQVF    HR+IR E  MD
Sbjct: 73  LEQNGFMQSNNPT-ANTNGDLPYCIYKNPGRVCSMRLQPASTQVFRSISHRNIRNEARMD 132

Query: 121 QNVDARLSVLESQMAKVVSVLRRNGFMQANI 147
           QNVD RLS+LE+QM KVVS+LRRNG MQ NI
Sbjct: 133 QNVDTRLSILETQMTKVVSILRRNGLMQGNI 162

[Close]

BLAST of MC03g0171 vs. NCBI nr
Match: KAG6583423.1 (hypothetical protein SDJN03_19355, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 172 bits (437), Expect = 2.39e-52
Identity = 89/123 (72.36%), Postives = 99/123 (80.49%), Query Frame = 0


Query: 1   MGQGRARGSSLGPTPTQVFKSSPRRFTGIEIHNEAN-MEDYQNVDARLSILESKMANMLS 60
           MG+GR RG  LGPTPT VFKS+PR+FT IEIHNEAN MEDY+NVDARLSILE KMANMLS
Sbjct: 1   MGKGRVRGMKLGPTPTIVFKSTPRQFTEIEIHNEANNMEDYENVDARLSILELKMANMLS 60

Query: 61  ILVQNGFMQASGANGVYTNGASPYCQYKNPGRVSSMRLRPTSTQVF----HRDIRYETNM 118
           IL QNGFMQ++     +TNG SPYC YKNPGRV  M+L+PTSTQVF    HR+IR E  M
Sbjct: 61  ILEQNGFMQSNNLTAAHTNGDSPYCIYKNPGRVCGMKLQPTSTQVFRSISHRNIRNEARM 120

[Close]

BLAST of MC03g0171 vs. NCBI nr
Match: KAG7019185.1 (hypothetical protein SDJN02_18143, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 182 bits (461), Expect = 3.42e-52
Identity = 94/131 (71.76%), Postives = 106/131 (80.92%), Query Frame = 0


Query: 11  LGPTPTQVFKSSPRRFTGIEIHNEAN-MEDYQNVDARLSILESKMANMLSILVQNGFMQA 70
           LGPTPT VFKS+PR+FT IEIHNEAN MEDY+NVDARLSILE KMANMLSIL QNGFMQ+
Sbjct: 3   LGPTPTIVFKSTPRQFTEIEIHNEANNMEDYENVDARLSILELKMANMLSILEQNGFMQS 62

Query: 71  SGANGVYTNGASPYCQYKNPGRVSSMRLRPTSTQVF----HRDIRYETNMDQNVDARLSV 130
           +     +TNG SPYC YKNPGRV  M+L+PTSTQVF    HR+IR E  MDQNVD RLS+
Sbjct: 63  NNLTAAHTNGDSPYCIYKNPGRVCGMKLQPTSTQVFRSISHRNIRNEARMDQNVDTRLSI 122

Query: 131 LESQMAKVVSV 136
           LE+QM K + V
Sbjct: 123 LEAQMTKELGV 133

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BLAST of MC03g0171 vs. ExPASy TrEMBL
Match: A0A0A0LUW6 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G523050 PE=4 SV=1)

HSP 1 Score: 211 bits (537), Expect = 9.31e-68
Identity = 107/151 (70.86%), Postives = 121/151 (80.13%), Query Frame = 0


Query: 1   MGQGRARGSSLGPTPTQVFKSSPRRFTGIEIHNEANMEDYQNVDARLSILESKMANMLSI 60
           MG+GR RG  LGPT T VFKS+PR+FT  EIH+EAN+EDYQNVDARLSILE KMANM+SI
Sbjct: 1   MGKGRVRGMKLGPTSTIVFKSTPRQFTEFEIHDEANLEDYQNVDARLSILELKMANMISI 60

Query: 61  LVQNGFMQASGANGVYTNGASPYCQYKNPGRVSSMRLRPTSTQVF----HRDIRYETNMD 120
           L QNGFMQ++     +TNG  PYC YKNPGRV SMRL+P STQVF    HR+IR E  MD
Sbjct: 61  LEQNGFMQSNNPTATHTNGDLPYCIYKNPGRVCSMRLQPASTQVFRSISHRNIRNEARMD 120

Query: 121 QNVDARLSVLESQMAKVVSVLRRNGFMQANI 147
           QNVD RLS+LE+QM KVVS+LRRNG MQ NI
Sbjct: 121 QNVDTRLSILETQMTKVVSILRRNGLMQGNI 151

[Close]

BLAST of MC03g0171 vs. ExPASy TrEMBL
Match: A0A5D3BE38 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold194G002160 PE=4 SV=1)

HSP 1 Score: 204 bits (518), Expect = 7.05e-65
Identity = 106/151 (70.20%), Postives = 119/151 (78.81%), Query Frame = 0


Query: 1   MGQGRARGSSLGPTPTQVFKSSPRRFTGIEIHNEANMEDYQNVDARLSILESKMANMLSI 60
           MG+GR RG  LGPT T VFKS+PR+FT  EIH+E N+EDYQNVDARLSILE KMANM+SI
Sbjct: 1   MGKGRVRGMKLGPTSTIVFKSTPRQFTEFEIHDEGNLEDYQNVDARLSILELKMANMISI 60

Query: 61  LVQNGFMQASGANGVYTNGASPYCQYKNPGRVSSMRLRPTSTQVF----HRDIRYETNMD 120
           L QNGFMQ++      TNG  PYC YKNPGRV SMRL+P STQVF    HR+IR E  MD
Sbjct: 61  LEQNGFMQSNNPT-ANTNGDLPYCIYKNPGRVCSMRLQPASTQVFRSISHRNIRNEARMD 120

Query: 121 QNVDARLSVLESQMAKVVSVLRRNGFMQANI 147
           QNVD RLS+LE+QM KVVS+LRRNG MQ NI
Sbjct: 121 QNVDTRLSILETQMTKVVSILRRNGLMQGNI 150

[Close]

BLAST of MC03g0171 vs. ExPASy TrEMBL
Match: A0A5A7VKN2 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold352G00670 PE=4 SV=1)

HSP 1 Score: 204 bits (518), Expect = 1.04e-64
Identity = 106/151 (70.20%), Postives = 119/151 (78.81%), Query Frame = 0


Query: 1   MGQGRARGSSLGPTPTQVFKSSPRRFTGIEIHNEANMEDYQNVDARLSILESKMANMLSI 60
           MG+GR RG  LGPT T VFKS+PR+FT  EIH+E N+EDYQNVDARLSILE KMANM+SI
Sbjct: 13  MGKGRVRGMKLGPTSTIVFKSTPRQFTEFEIHDEGNLEDYQNVDARLSILELKMANMISI 72

Query: 61  LVQNGFMQASGANGVYTNGASPYCQYKNPGRVSSMRLRPTSTQVF----HRDIRYETNMD 120
           L QNGFMQ++      TNG  PYC YKNPGRV SMRL+P STQVF    HR+IR E  MD
Sbjct: 73  LEQNGFMQSNNPT-ANTNGDLPYCIYKNPGRVCSMRLQPASTQVFRSISHRNIRNEARMD 132

Query: 121 QNVDARLSVLESQMAKVVSVLRRNGFMQANI 147
           QNVD RLS+LE+QM KVVS+LRRNG MQ NI
Sbjct: 133 QNVDTRLSILETQMTKVVSILRRNGLMQGNI 162

The following BLAST results are available for this feature:

BLAST of MC03g0171 vs.


Match Name	E-value	Identity	Description

BLAST of MC03g0171 vs. NCBI nr


Match Name	E-value	Identity	Description
KGN65730.1	1.92e-67	70.86	hypothetical protein Csa_019939 [Cucumis sativus]	[more]
TYJ97397.1	1.46e-64	70.20	hypothetical protein E5676_scaffold194G002160 [Cucumis melo var. makuwa]	[more]
KAA0067747.1	2.15e-64	70.20	hypothetical protein E6C27_scaffold352G00670 [Cucumis melo var. makuwa]	[more]
KAG6583423.1	2.39e-52	72.36	hypothetical protein SDJN03_19355, partial [Cucurbita argyrosperma subsp. sorori...	[more]
KAG7019185.1	3.42e-52	71.76	hypothetical protein SDJN02_18143, partial [Cucurbita argyrosperma subsp. argyro...	[more]

BLAST of MC03g0171 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A0A0LUW6	9.31e-68	70.86	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G523050 PE=4 SV=1	[more]
A0A5D3BE38	7.05e-65	70.20	Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold...	[more]
A0A5A7VKN2	1.04e-64	70.20	Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold...	[more]

BLAST of MC03g0171 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description

InterPro

Analysis Name: InterPro Annotations of Bitter gourd (Dali-11) v1
Date Performed: 2021-10-25

Position :

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IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..24
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 9..23

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
MC03g0171.1	MC03g0171.1	mRNA