MC02g_new0383 (gene) Bitter gourd (Dali-11) v1

Overview


Name	MC02g_new0383
Type	gene
Organism	Momordica charantia cv. Dali-11 (Bitter gourd (Dali-11) v1)
Description	Polyprotein
Location	MC02: 16167249 .. 16168576 (+)
RNA-Seq Expression	MC02g_new0383
Synteny	MC02g_new0383

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

CCGGTTACATCTCTAGGAGGAGCAGGGTACTTCGTGTCCTTTATAGATGACTACTCTAGAAGATGTTGGGTGTATCCTATCAAGAGGAAGGTAGATGTGTGTTCGGTCTTCAAAGTGTTCAAAGCGCAGGTAAAAATTCAATCTGGCAAGAAGTTGAAGTTTTTGCGGACAGATAATAGAGTGGAATATACGAGCAATGAGTTTGCGGATTTCTGTAATCAAGAAGGCATCAAGAGGCAGTTCACTACGGCTTACACTCCTCAGCAAAATGGAGTAGCAGAGCAGATGAACAAAACGTTGTTGGAGAGAACAAGAGCAATGTTAGCAGCTACAGGCTTAGATAAATCTTTCTGGGTAGAAGCAGTCAATACCGCCTGTTATGTAGTGAATCGTGCTGTATCAACCGCAATTGAGTTGAAGACACCGATGTAGATGTGGACGGGCAAGCCAGCTGATTATTCAAACCTCCATACATTTGGAAGTTCGGTGTACGTAATGTACAATGCCTAAGAAACTACAAAGCTGGATCCAAAATCCAGGAAATGTTTATTCTTGGGGTATGCTGGTAGTGTGAAGGGGTATCACCTGTGGGATCCCACTGCCCACAAGGTTATCGTCAGCAGGGATGTGATCTTTATGGAGGACAAGAGACAAGCTGTAGAAGATGATAGCACTGTAAATAAAAGTTCAGAGACTACAACAGTACACGTGGAGAAAGAATCTGAAGAGGACTCTTCTGAAGCTGAACCAGCGCACAAGATCCAGGAACCAGAAAGATCACAAGTACCAGAGACTCGTCGATTAGGTAGGATGACAAAACCACCAAGTTGGCAATCTGATTAAATTATAGAGAGTAATGTTGCATATTGTCTTCTAACTGAGGATGGAGAGCCATTTACTCTCCAAGAGGCAATGATTAGTTCAAATACTACTGAGTGGATGACAAAAATGCAGGAAGAAATAGAAGCTCTCTATAAGAACAAGACCTGGGAACTTGTAATGCTACCACGTGGGAGAAAGCCGATTGGCAACTAGTGGGTGTATAAGATCAAACGCAACAATAATGACCAAGTGGAGCGATATCGTGCAAGATTGGTGGTGAAGGGATATGCTCAGAAAGAACGTATTGACTTCAATGAGATATTTTCTCCGGTAGTTCAACTGACTACGGTTAGAATAGTCTTGGCAATATGTGCTACATTTGATCTACAACAGGAGCAGTTAGATGTTAAAACTGTAGGGATCGAATCCCAGCGGAAGCGCGTAAACGCCGTGTTCATAATTCCTTTTAATTTTAATGTACAGAAAATAAAAACTCGAGAAAGAGC

mRNA sequence

ATGGAGGACAAGAGACAAGCTGTAGAAGATGATAGCACTGTAAATAAAAGTTCAGAGACTACAACAGTACACGTGGAGAAAGAATCTGAAGAGGACTCTTCTGAAGCTGAACCAGCGCACAAGATCCAGGAACCAGAAAGATCACAAGTACCAGAGACTCGTCGATTAGGTAGGATGACAAAACCACCAAGTTGGCAATCTGATTAA

Coding sequence (CDS)

ATGGAGGACAAGAGACAAGCTGTAGAAGATGATAGCACTGTAAATAAAAGTTCAGAGACTACAACAGTACACGTGGAGAAAGAATCTGAAGAGGACTCTTCTGAAGCTGAACCAGCGCACAAGATCCAGGAACCAGAAAGATCACAAGTACCAGAGACTCGTCGATTAGGTAGGATGACAAAACCACCAAGTTGGCAATCTGATTAA

Protein sequence

MEDKRQAVEDDSTVNKSSETTTVHVEKESEEDSSEAEPAHKIQEPERSQVPETRRLGRMTKPPSWQSD

Homology

[Close]

BLAST of MC02g_new0383 vs. NCBI nr
Match: KAA0051929.1 (polyprotein [Cucumis melo var. makuwa])

HSP 1 Score: 63.5 bits (153), Expect = 2.60e-10
Identity = 41/68 (60.29%), Postives = 49/68 (72.06%), Query Frame = 0


Query: 1  MEDKRQAVEDDSTVNKSSETTTVHVEKESEEDSSEAEPAHKIQEPERSQVPETRRLGRMT 60
          MEDK+Q   DD+TVN+SSET  VH+EK S + S EAEP H+IQEP   QV E  R GR T
Sbjct: 18 MEDKKQEA-DDNTVNESSETAIVHMEK-SIDGSFEAEPVHEIQEPFEQQVLEIHRSGRTT 77

Query: 61 KPPSWQSD 68
          +PP WQS+
Sbjct: 78 RPPGWQSE 83

[Close]

BLAST of MC02g_new0383 vs. NCBI nr
Match: KAE8665697.1 (Esterase/lipase/thioesterase family protein isoform 2 [Hibiscus syriacus])

HSP 1 Score: 64.3 bits (155), Expect = 6.36e-10
Identity = 42/69 (60.87%), Postives = 50/69 (72.46%), Query Frame = 0


Query: 1   MEDKRQAVEDDSTVNKSSETTTVHVEKESEE-DSSEAEPAHKIQEPERSQVPETRRLGRM 60
           +EDK Q  EDD +V KS ETT +HVEKE EE DSSEAEPAH  QEPE S+ P TR+  R+
Sbjct: 614 VEDKLQRKEDDDSVEKS-ETTQIHVEKEFEEGDSSEAEPAHDEQEPESSKAPTTRQSNRV 673

Query: 61  TKPPSWQSD 68
            + P+W SD
Sbjct: 674 RRRPNWHSD 681

[Close]

BLAST of MC02g_new0383 vs. NCBI nr
Match: TYK12233.1 (polyprotein [Cucumis melo var. makuwa])

HSP 1 Score: 63.5 bits (153), Expect = 7.59e-10
Identity = 41/68 (60.29%), Postives = 49/68 (72.06%), Query Frame = 0


Query: 1  MEDKRQAVEDDSTVNKSSETTTVHVEKESEEDSSEAEPAHKIQEPERSQVPETRRLGRMT 60
          MEDK+Q   DD+TVN+SSET  VH+EK S + S EAEP H+IQEP   QV E  R GR T
Sbjct: 18 MEDKKQEA-DDNTVNESSETAIVHMEK-SIDGSFEAEPVHEIQEPFEQQVLEIHRSGRTT 77

Query: 61 KPPSWQSD 68
          +PP WQS+
Sbjct: 78 RPPGWQSE 83

[Close]

BLAST of MC02g_new0383 vs. NCBI nr
Match: KAE8656252.1 (Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Hibiscus syriacus])

HSP 1 Score: 63.5 bits (153), Expect = 1.19e-09
Identity = 41/69 (59.42%), Postives = 49/69 (71.01%), Query Frame = 0


Query: 1   MEDKRQAVEDDSTVNKSSETTTVHVEKESEE-DSSEAEPAHKIQEPERSQVPETRRLGRM 60
           +EDK Q  EDD +  KS ETT +HVEK+ EE DSSEAEPAH  QEPE S+ P TR+  RM
Sbjct: 545 LEDKLQRKEDDDSAEKS-ETTQIHVEKDFEEGDSSEAEPAHDEQEPESSEAPTTRQSDRM 604

Query: 61  TKPPSWQSD 68
            + P+W SD
Sbjct: 605 RRRPNWHSD 612

[Close]

BLAST of MC02g_new0383 vs. NCBI nr
Match: KAE8677858.1 (cytochrome P450 71A9-like [Hibiscus syriacus])

HSP 1 Score: 62.4 bits (150), Expect = 3.02e-09
Identity = 41/69 (59.42%), Postives = 48/69 (69.57%), Query Frame = 0


Query: 1   MEDKRQAVEDDSTVNKSSETTTVHVEKESEE-DSSEAEPAHKIQEPERSQVPETRRLGRM 60
           +EDK Q  EDD    KS ETT +HVEKE EE DSSEAEPAH  QEPE S+ P TR+  R+
Sbjct: 612 VEDKLQRKEDDDNAEKS-ETTQIHVEKEFEEGDSSEAEPAHDEQEPESSEAPTTRQSDRV 671

Query: 61  TKPPSWQSD 68
            + P+W SD
Sbjct: 672 RRRPNWHSD 679

[Close]

BLAST of MC02g_new0383 vs. ExPASy TrEMBL
Match: A0A5A7UEK2 (Polyprotein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold60G003850 PE=4 SV=1)

HSP 1 Score: 63.5 bits (153), Expect = 1.26e-10
Identity = 41/68 (60.29%), Postives = 49/68 (72.06%), Query Frame = 0


Query: 1  MEDKRQAVEDDSTVNKSSETTTVHVEKESEEDSSEAEPAHKIQEPERSQVPETRRLGRMT 60
          MEDK+Q   DD+TVN+SSET  VH+EK S + S EAEP H+IQEP   QV E  R GR T
Sbjct: 18 MEDKKQEA-DDNTVNESSETAIVHMEK-SIDGSFEAEPVHEIQEPFEQQVLEIHRSGRTT 77

Query: 61 KPPSWQSD 68
          +PP WQS+
Sbjct: 78 RPPGWQSE 83

[Close]

BLAST of MC02g_new0383 vs. ExPASy TrEMBL
Match: A0A6A2Y5D9 (Esterase/lipase/thioesterase family protein isoform 2 OS=Hibiscus syriacus OX=106335 GN=F3Y22_tig00112530pilonHSYRG00144 PE=4 SV=1)

HSP 1 Score: 64.3 bits (155), Expect = 3.08e-10
Identity = 42/69 (60.87%), Postives = 50/69 (72.46%), Query Frame = 0


Query: 1   MEDKRQAVEDDSTVNKSSETTTVHVEKESEE-DSSEAEPAHKIQEPERSQVPETRRLGRM 60
           +EDK Q  EDD +V KS ETT +HVEKE EE DSSEAEPAH  QEPE S+ P TR+  R+
Sbjct: 614 VEDKLQRKEDDDSVEKS-ETTQIHVEKEFEEGDSSEAEPAHDEQEPESSKAPTTRQSNRV 673

Query: 61  TKPPSWQSD 68
            + P+W SD
Sbjct: 674 RRRPNWHSD 681

[Close]

BLAST of MC02g_new0383 vs. ExPASy TrEMBL
Match: A0A5D3CK06 (Polyprotein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold769G00380 PE=4 SV=1)

HSP 1 Score: 63.5 bits (153), Expect = 3.68e-10
Identity = 41/68 (60.29%), Postives = 49/68 (72.06%), Query Frame = 0


Query: 1  MEDKRQAVEDDSTVNKSSETTTVHVEKESEEDSSEAEPAHKIQEPERSQVPETRRLGRMT 60
          MEDK+Q   DD+TVN+SSET  VH+EK S + S EAEP H+IQEP   QV E  R GR T
Sbjct: 18 MEDKKQEA-DDNTVNESSETAIVHMEK-SIDGSFEAEPVHEIQEPFEQQVLEIHRSGRTT 77

Query: 61 KPPSWQSD 68
          +PP WQS+
Sbjct: 78 RPPGWQSE 83

[Close]

BLAST of MC02g_new0383 vs. ExPASy TrEMBL
Match: A0A6A2WD75 (Retrovirus-related Pol polyprotein from transposon TNT 1-94 OS=Hibiscus syriacus OX=106335 GN=F3Y22_tig00117005pilonHSYRG00236 PE=4 SV=1)

HSP 1 Score: 63.5 bits (153), Expect = 5.74e-10
Identity = 41/69 (59.42%), Postives = 49/69 (71.01%), Query Frame = 0


Query: 1   MEDKRQAVEDDSTVNKSSETTTVHVEKESEE-DSSEAEPAHKIQEPERSQVPETRRLGRM 60
           +EDK Q  EDD +  KS ETT +HVEK+ EE DSSEAEPAH  QEPE S+ P TR+  RM
Sbjct: 545 LEDKLQRKEDDDSAEKS-ETTQIHVEKDFEEGDSSEAEPAHDEQEPESSEAPTTRQSDRM 604

Query: 61  TKPPSWQSD 68
            + P+W SD
Sbjct: 605 RRRPNWHSD 612

[Close]

BLAST of MC02g_new0383 vs. ExPASy TrEMBL
Match: A0A6A2XQI6 (Cytochrome P450 71A9-like OS=Hibiscus syriacus OX=106335 GN=F3Y22_tig00111493pilonHSYRG00053 PE=4 SV=1)

HSP 1 Score: 62.4 bits (150), Expect = 1.46e-09
Identity = 41/69 (59.42%), Postives = 48/69 (69.57%), Query Frame = 0


Query: 1   MEDKRQAVEDDSTVNKSSETTTVHVEKESEE-DSSEAEPAHKIQEPERSQVPETRRLGRM 60
           +EDK Q  EDD    KS ETT +HVEKE EE DSSEAEPAH  QEPE S+ P TR+  R+
Sbjct: 612 VEDKLQRKEDDDNAEKS-ETTQIHVEKEFEEGDSSEAEPAHDEQEPESSEAPTTRQSDRV 671

Query: 61  TKPPSWQSD 68
            + P+W SD
Sbjct: 672 RRRPNWHSD 679

The following BLAST results are available for this feature:

BLAST of MC02g_new0383 vs.


Match Name	E-value	Identity	Description

BLAST of MC02g_new0383 vs. NCBI nr


Match Name	E-value	Identity	Description
KAA0051929.1	2.60e-10	60.29	polyprotein [Cucumis melo var. makuwa]	[more]
KAE8665697.1	6.36e-10	60.87	Esterase/lipase/thioesterase family protein isoform 2 [Hibiscus syriacus]	[more]
TYK12233.1	7.59e-10	60.29	polyprotein [Cucumis melo var. makuwa]	[more]
KAE8656252.1	1.19e-09	59.42	Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Hibiscus syriacus]	[more]
KAE8677858.1	3.02e-09	59.42	cytochrome P450 71A9-like [Hibiscus syriacus]	[more]

BLAST of MC02g_new0383 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5A7UEK2	1.26e-10	60.29	Polyprotein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold60G003850 PE...	[more]
A0A6A2Y5D9	3.08e-10	60.87	Esterase/lipase/thioesterase family protein isoform 2 OS=Hibiscus syriacus OX=10...	[more]
A0A5D3CK06	3.68e-10	60.29	Polyprotein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold769G00380 PE...	[more]
A0A6A2WD75	5.74e-10	59.42	Retrovirus-related Pol polyprotein from transposon TNT 1-94 OS=Hibiscus syriacus...	[more]
A0A6A2XQI6	1.46e-09	59.42	Cytochrome P450 71A9-like OS=Hibiscus syriacus OX=106335 GN=F3Y22_tig00111493pil...	[more]

BLAST of MC02g_new0383 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description

InterPro

Analysis Name: InterPro Annotations of Bitter gourd (Dali-11) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..68
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 21..54

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
MC02g_new0383.1	MC02g_new0383.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006464	cellular protein modification process
biological_process	GO:0016310	phosphorylation
biological_process	GO:0050896	response to stimulus
cellular_component	GO:0110165	cellular anatomical entity
molecular_function	GO:0016747	acyltransferase activity, transferring groups other than amino-acyl groups
molecular_function	GO:1901363	heterocyclic compound binding
molecular_function	GO:0016301	kinase activity
molecular_function	GO:0097159	organic cyclic compound binding
molecular_function	GO:0008233	peptidase activity
molecular_function	GO:0046914	transition metal ion binding