MC02g_new0321 (gene) Bitter gourd (Dali-11) v1

Overview
NameMC02g_new0321
Typegene
OrganismMomordica charantia cv. Dali-11 (Bitter gourd (Dali-11) v1)
DescriptionUnknown protein
LocationMC02: 13692338 .. 13693323 (-)
RNA-Seq ExpressionMC02g_new0321
SyntenyMC02g_new0321
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
CAGATATCCTTCTCGATCAATAATAATCTCCAAGAAGCATAAACATTCAAATCCAAGAGGCATGGCATCTCGGAAGCTGTTCATGGTGTCCATTGCTGCCATGCTCGTATTTGCATGTTATGCTTCTTCAAGTATGTTCTTATCTTGTAACTTTATTCTTCTTTTCTCTCGACATGATCTCGTTAAGCCGAAACCATAAATTTTCTTAACGAGGGTCGAAATCTTTATGTGCTAACCTTTTATATGTATACACATTGTTAAGTATTTTGTAGGTATAAATACTATTATTGAGTGATGATGTTAACATCACGAAAAGTTATAATTTTGTATTAATTTTTTTTTATTAGGTATAGATTTTGTATTAAGATTTTACAAACAAAGATCAAAATATCGCTTCTCAAAATACAAAATAGCATAGGGACCAAACTAAATCAAACACCCCTTGAAAGCAAATTTATATACAAGTTTTGAATTACGACAAATTAAGAGCGTCTTCAATTCTAGAATGTTTATAAGTTGTTTTTGATAAAACATTATTAGTAACGAAAGCTAATGTCTGGTCTGATGGCAGCTGAAGAAAATGATGAGGATCAAATTTGGACTTGCACTCGACCATGTTCAAGCAATTTTGGAGATCTAGAATGCGACGTAGGTTGCGTCAATGGAAACGAAGGCAACGGATTTTGTCTTCCACAGCATGGTGACTTTAATCACAAAGTTTGCTGTTGCAGTAGAAGTGAGCTGTTGCAATAGTAATCCATGAATTTAAGAAGGATATTTCAGTATCTTCCATTGGATATAAGTTCCAAACAATTCTATACCTTTTTCAATGCAAATATGAAATGAAATGTGTGGTTGAATACTATATTATTCGGTTCGTTTTAGTTCCGGTGCTTTTAAAATGTTTCAGTTTTCATCCCTGTTGTTGATTTTAGTTCTTATACTTCCAAAAATTCGGTTTTGATTCTTGTACTTTTATTTGGTCT

mRNA sequence

ATGGCATCTCGGAAGCTGTTCATGGTGTCCATTGCTGCCATGCTCGTATTTGCATGTTATGCTTCTTCAACTGAAGAAAATGATGAGGATCAAATTTGGACTTGCACTCGACCATGTTCAAGCAATTTTGGAGATCTAGAATGCGACGTAGGTTGCGTCAATGGAAACGAAGGCAACGGATTTTGTCTTCCACAGCATGGTGACTTTAATCACAAAGTTTGCTGTTGCAGTAGAAGTGAGCTGTTGCAATAG

Coding sequence (CDS)

ATGGCATCTCGGAAGCTGTTCATGGTGTCCATTGCTGCCATGCTCGTATTTGCATGTTATGCTTCTTCAACTGAAGAAAATGATGAGGATCAAATTTGGACTTGCACTCGACCATGTTCAAGCAATTTTGGAGATCTAGAATGCGACGTAGGTTGCGTCAATGGAAACGAAGGCAACGGATTTTGTCTTCCACAGCATGGTGACTTTAATCACAAAGTTTGCTGTTGCAGTAGAAGTGAGCTGTTGCAATAG

Protein sequence

MASRKLFMVSIAAMLVFACYASSTEENDEDQIWTCTRPCSSNFGDLECDVGCVNGNEGNGFCLPQHGDFNHKVCCCSRSELLQ
Homology
BLAST of MC02g_new0321 vs. NCBI nr
Match: KGN54497.1 (hypothetical protein Csa_012842 [Cucumis sativus])

HSP 1 Score: 78.6 bits (192), Expect = 5.67e-17
Identity = 35/81 (43.21%), Postives = 53/81 (65.43%), Query Frame = 0

Query: 1  MASRKLFMVSIAAMLVFACYASSTEENDEDQIWTCTRPCSSNFGDLECDVGCVNGNEGNG 60
          M ++KLF+VS+   + F+C+ASS E +D   +W C  PCS+N GD+ C+  C+  +EG G
Sbjct: 1  MVTQKLFIVSMLVAVTFSCFASSMEGDD---LWNCVIPCSNNNGDILCNTACIEQDEGAG 60

Query: 61 FCLPQ-HGDFNHKVCCCSRSE 80
          FC+P+  G  + KVCCC+   
Sbjct: 61 FCVPKLPGISDMKVCCCNNGR 78

BLAST of MC02g_new0321 vs. NCBI nr
Match: KGN61228.1 (hypothetical protein Csa_006463 [Cucumis sativus])

HSP 1 Score: 58.5 bits (140), Expect = 4.17e-09
Identity = 31/77 (40.26%), Postives = 45/77 (58.44%), Query Frame = 0

Query: 1  MASRKLFMVSIAAMLVFACYASSTEENDEDQIWTCTRPCSSNFGDLECDVGCVNGNEGNG 60
          MA++KL  +SI  +++FAC AS+T+  D   +  C RPCS  + D  C   C+  N G G
Sbjct: 1  MATQKLATISIVVLMIFACIASTTK-GDVLNVH-CVRPCSDTYDDESCYNDCIQENLGAG 60

Query: 61 FCLPQHGDFNHKVCCCS 77
          FC P+    + K CCC+
Sbjct: 61 FCYPKLPSTD-KDCCCN 74

BLAST of MC02g_new0321 vs. NCBI nr
Match: KAE8651697.1 (hypothetical protein Csa_006343 [Cucumis sativus])

HSP 1 Score: 55.5 bits (132), Expect = 6.81e-08
Identity = 30/77 (38.96%), Postives = 43/77 (55.84%), Query Frame = 0

Query: 1  MASRKLFMVSIAAMLVFACYASSTEENDEDQIWTCTRPCSSNFGDLECDVGCVNGNEGNG 60
          MA++KL  VSI  +++ AC  S+T+  D   +  C RPCS  + D  C   C+  N G G
Sbjct: 1  MATQKLATVSIVMLMILACIVSTTK-GDVLNV-NCVRPCSDTYDDESCYNDCIRENLGAG 60

Query: 61 FCLPQHGDFNHKVCCCS 77
          FC P+    + K CCC+
Sbjct: 61 FCYPKLPSTD-KDCCCN 74

BLAST of MC02g_new0321 vs. ExPASy TrEMBL
Match: A0A0A0L1R8 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_4G339000 PE=4 SV=1)

HSP 1 Score: 78.6 bits (192), Expect = 2.74e-17
Identity = 35/81 (43.21%), Postives = 53/81 (65.43%), Query Frame = 0

Query: 1  MASRKLFMVSIAAMLVFACYASSTEENDEDQIWTCTRPCSSNFGDLECDVGCVNGNEGNG 60
          M ++KLF+VS+   + F+C+ASS E +D   +W C  PCS+N GD+ C+  C+  +EG G
Sbjct: 1  MVTQKLFIVSMLVAVTFSCFASSMEGDD---LWNCVIPCSNNNGDILCNTACIEQDEGAG 60

Query: 61 FCLPQ-HGDFNHKVCCCSRSE 80
          FC+P+  G  + KVCCC+   
Sbjct: 61 FCVPKLPGISDMKVCCCNNGR 78

BLAST of MC02g_new0321 vs. ExPASy TrEMBL
Match: A0A0A0LHG9 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G071930 PE=4 SV=1)

HSP 1 Score: 58.5 bits (140), Expect = 2.02e-09
Identity = 31/77 (40.26%), Postives = 45/77 (58.44%), Query Frame = 0

Query: 1  MASRKLFMVSIAAMLVFACYASSTEENDEDQIWTCTRPCSSNFGDLECDVGCVNGNEGNG 60
          MA++KL  +SI  +++FAC AS+T+  D   +  C RPCS  + D  C   C+  N G G
Sbjct: 1  MATQKLATISIVVLMIFACIASTTK-GDVLNVH-CVRPCSDTYDDESCYNDCIQENLGAG 60

Query: 61 FCLPQHGDFNHKVCCCS 77
          FC P+    + K CCC+
Sbjct: 61 FCYPKLPSTD-KDCCCN 74

BLAST of MC02g_new0321 vs. ExPASy TrEMBL
Match: A0A0A0LJG5 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G072430 PE=4 SV=1)

HSP 1 Score: 52.4 bits (124), Expect = 5.36e-07
Identity = 28/77 (36.36%), Postives = 42/77 (54.55%), Query Frame = 0

Query: 1  MASRKLFMVSIAAMLVFACYASSTEENDEDQIWTCTRPCSSNFGDLECDVGCVNGNEGNG 60
          MA++KL  +SI  +++F C  S+T+  D   +  C RPC   + D  C   C+  N G G
Sbjct: 1  MATQKLATISIVVLVIFPCIVSTTK-GDVLNVH-CVRPCYDTYDDESCYNDCIRENLGAG 60

Query: 61 FCLPQHGDFNHKVCCCS 77
          FC P+    + K CCC+
Sbjct: 61 FCYPKLPSTD-KDCCCN 74

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
KGN54497.15.67e-1743.21hypothetical protein Csa_012842 [Cucumis sativus][more]
KGN61228.14.17e-0940.26hypothetical protein Csa_006463 [Cucumis sativus][more]
KAE8651697.16.81e-0838.96hypothetical protein Csa_006343 [Cucumis sativus][more]
Match NameE-valueIdentityDescription
A0A0A0L1R82.74e-1743.21Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_4G339000 PE=4 SV=1[more]
A0A0A0LHG92.02e-0940.26Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G071930 PE=4 SV=1[more]
A0A0A0LJG55.36e-0736.36Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G072430 PE=4 SV=1[more]
Match NameE-valueIdentityDescription
InterPro
Analysis Name: InterPro Annotations of Bitter gourd (Dali-11) v1
Date Performed: 2021-10-25
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePROSITEPS51257PROKAR_LIPOPROTEINcoord: 1..19
score: 6.0

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
MC02g_new0321.1MC02g_new0321.1mRNA