MC02g_new0301 (gene) Bitter gourd (Dali-11) v1

Overview


Name	MC02g_new0301
Type	gene
Organism	Momordica charantia cv. Dali-11 (Bitter gourd (Dali-11) v1)
Description	Unknown protein
Location	MC02: 12860103 .. 12861302 (-)
RNA-Seq Expression	MC02g_new0301
Synteny	MC02g_new0301

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

CTGTCTTAGGAGAGCGTCCAAATTTGTGAGCGATCCAGGGTCCGTGCTGCAACGGACAATTAACCACGCTATCAAGGCCGAGCTGGATGGAAGGGAGGCTTTGGCAGCGAAGAAGAGGGAGAACTCCTCTGTGGCCTTAGAGGCTGCCACCACGCTGAAGGGCGAGCTGCTGAAGGCCCGGGGCGAGGTGGAAATTTTGAGGGCTGAAGTGGAGGCCAAAGTCGAGCTTCTGAAGAAGAAGGGTGAGAAACACAAGGCCCACCTCCGAGCAGCCCATGCCATCACCAAAGGGCTGGAGAAGGAGAAATTCCAGCTCTTGAAAGAGAAGGATGATTTAACTCAAGCCCTTGAGGAGAAGAACACCTCAATAGGGCGTCTGACGACCGATCTCAAGGAAGTGAAGGAACCTCACCAACGGGGTTCTGTTGGAGGAATCATTCAGGCAACACCCAGACTTTGATGGGTTTGCCAAAGACTTCAGTGATGCCGGCTTCAAATTTCTGATGAAGGGCATTGCTGCTGACATGCCCCACCTCCAGATCGACCTCGGCGATCTGAAGAAGAGGTATGCTGAGAAATGGGCTTTCGTGCCCAACAATACTCTAGGCCCTCAGTCGCTGGTGGAGAAGTATGTCAGAGATCTACACTCTGACTGCTCCGACTTGGAAGAAGACGATGCCCCTAGTCAGGAGCCTAACGAGGTCGGCATTACCCAAGAAGAAGTTCCTTCGCAGCAGGGCGGATCTCAGGAGGTCAACCTTCTGGGTTCCCAAGGCGAGTTATCCTCTCACCTCGAGAGCAGTTGAGATTCCTTGTAGATTTTGTTCTATATTTTTTTTTATTATTTTTTGTAAGTCTCAGGGCAGAGCTGCAAAGTATACAAGCCTTGGCTCTATCCTTCAATCAATGAAGTCTTCATTCCCTTACTTCTATGCATCTAGCTCTGTCTTTTTCTTTCATTGCTTTTTCCTTATGCTTTTGAACTTGCTTTTGCAACTCTAAACTGATATATTAATAATTTCATCTCACACCTCTAACTCGTAAGTTTAAATGTTTGAGTGTGGGAGGAGTTGTTTCCACATCGCCCCTTTTACTTGATATTTTTAAGGTTTGAATTTGAGAGTTTCCTTCTCTGGTCTTTTATATTCCTCCTCGAACTCGGAAGTTCAAAAGATAATATTAAACAATTTTGAATTATTC

mRNA sequence

ATGAAGGGCATTGCTGCTGACATGCCCCACCTCCAGATCGACCTCGGCGATCTGAAGAAGAGGTATGCTGAGAAATGGGCTTTCGTGCCCAACAATACTCTAGGCCCTCAGTCGCTGGTGGAGAAGTATGTCAGAGATCTACACTCTGACTGCTCCGACTTGGAAGAAGACGATGCCCCTAGTCAGGAGCCTAACGAGGTCGGCATTACCCAAGAAGAAGTTCCTTCGCAGCAGGGCGGATCTCAGGAGGTCAACCTTCTGGGTTCCCAAGGCGAGTTATCCTCTCACCTCGAGAGCAGTTGA

Coding sequence (CDS)

ATGAAGGGCATTGCTGCTGACATGCCCCACCTCCAGATCGACCTCGGCGATCTGAAGAAGAGGTATGCTGAGAAATGGGCTTTCGTGCCCAACAATACTCTAGGCCCTCAGTCGCTGGTGGAGAAGTATGTCAGAGATCTACACTCTGACTGCTCCGACTTGGAAGAAGACGATGCCCCTAGTCAGGAGCCTAACGAGGTCGGCATTACCCAAGAAGAAGTTCCTTCGCAGCAGGGCGGATCTCAGGAGGTCAACCTTCTGGGTTCCCAAGGCGAGTTATCCTCTCACCTCGAGAGCAGTTGA

Protein sequence

MKGIAADMPHLQIDLGDLKKRYAEKWAFVPNNTLGPQSLVEKYVRDLHSDCSDLEEDDAPSQEPNEVGITQEEVPSQQGGSQEVNLLGSQGELSSHLESS

Homology

[Close]

BLAST of MC02g_new0301 vs. NCBI nr
Match: XP_022158409.1 (uncharacterized protein LOC111024898 [Momordica charantia])

HSP 1 Score: 156 bits (395), Expect = 2.03e-45
Identity = 81/100 (81.00%), Postives = 87/100 (87.00%), Query Frame = 0


Query: 1   MKGIAADMPHLQIDLGDLKKRYAEKWAFVPNNTLGPQSLVEKYVRDLHSDCSDLEEDDAP 60
           MKGIA DM HLQIDL D+KK+Y+EKWA  PN T GPQSLV+KYVR+L SD SD+EE DAP
Sbjct: 147 MKGIAVDMSHLQIDLSDIKKKYSEKWASGPNGTPGPQSLVDKYVRELDSDYSDVEEGDAP 206

Query: 61  SQEPNEVGITQEEVPSQQGGSQEVNLLGSQGELSSHLESS 100
           SQEPNEVG TQEEVPSQ GGSQEVNLLGSQGELSSHL SS
Sbjct: 207 SQEPNEVGTTQEEVPSQLGGSQEVNLLGSQGELSSHLGSS 246

[Close]

BLAST of MC02g_new0301 vs. NCBI nr
Match: XP_022152119.1 (uncharacterized protein LOC111019909 [Momordica charantia])

HSP 1 Score: 158 bits (400), Expect = 2.21e-45
Identity = 81/100 (81.00%), Postives = 89/100 (89.00%), Query Frame = 0


Query: 1   MKGIAADMPHLQIDLGDLKKRYAEKWAFVPNNTLGPQSLVEKYVRDLHSDCSDLEEDDAP 60
           MKGIAADMPHLQIDL +LKK+Y+EKWA  PN T GPQSLV KYVR+L SD SD+EE+DAP
Sbjct: 216 MKGIAADMPHLQIDLSNLKKKYSEKWASGPNGTPGPQSLVVKYVRELDSDYSDMEEEDAP 275

Query: 61  SQEPNEVGITQEEVPSQQGGSQEVNLLGSQGELSSHLESS 100
           SQEPNE+G TQEEVPSQQ GSQEVNLLGS+GELSSHL SS
Sbjct: 276 SQEPNEIGTTQEEVPSQQDGSQEVNLLGSEGELSSHLGSS 315

[Close]

BLAST of MC02g_new0301 vs. NCBI nr
Match: XP_022142326.1 (uncharacterized protein LOC111012467 [Momordica charantia])

HSP 1 Score: 157 bits (398), Expect = 4.52e-43
Identity = 81/100 (81.00%), Postives = 87/100 (87.00%), Query Frame = 0


Query: 1   MKGIAADMPHLQIDLGDLKKRYAEKWAFVPNNTLGPQSLVEKYVRDLHSDCSDLEEDDAP 60
           MKGIAAD+PHL++DLGDLKKRYAEKWA  PN T GP SLV+KYVRDL SD SDL+ED+ P
Sbjct: 464 MKGIAADVPHLEVDLGDLKKRYAEKWASGPNGTSGPASLVDKYVRDLDSDYSDLDEDEVP 523

Query: 61  SQEPNEVGITQEEVPSQQGGSQEVNLLGSQGELSSHLESS 100
           SQEP EVG TQE VPSQQ GSQEVNLLGSQGELSSHL SS
Sbjct: 524 SQEPTEVGTTQEGVPSQQDGSQEVNLLGSQGELSSHLGSS 563

[Close]

BLAST of MC02g_new0301 vs. NCBI nr
Match: XP_022147182.1 (uncharacterized protein LOC111016193 [Momordica charantia])

HSP 1 Score: 127 bits (318), Expect = 2.47e-33
Identity = 62/80 (77.50%), Postives = 68/80 (85.00%), Query Frame = 0


Query: 1   MKGIAADMPHLQIDLGDLKKRYAEKWAFVPNNTLGPQSLVEKYVRDLHSDCSDLEEDDAP 60
           MKGIAADMPHLQIDL DLKKRY+E WA  PN T GPQSLV+KYVR+L SD SD+EE+DAP
Sbjct: 208 MKGIAADMPHLQIDLSDLKKRYSENWASGPNGTPGPQSLVDKYVRELDSDYSDMEEEDAP 267

Query: 61  SQEPNEVGITQEEVPSQQGG 80
           SQEP +VG TQEE PSQ GG
Sbjct: 268 SQEPTKVGTTQEEAPSQLGG 287

[Close]

BLAST of MC02g_new0301 vs. NCBI nr
Match: XP_022159252.1 (uncharacterized protein LOC111025665 [Momordica charantia])

HSP 1 Score: 129 bits (323), Expect = 1.75e-32
Identity = 64/81 (79.01%), Postives = 70/81 (86.42%), Query Frame = 0


Query: 1   MKGIAADMPHLQIDLGDLKKRYAEKWAFVPNNTLGPQSLVEKYVRDLHSDCSDLEEDDAP 60
           MKGIAADMPHLQIDL  LKK+Y+EKWA  PN T  PQSLV+KYVR+L SD SD+EE+DAP
Sbjct: 454 MKGIAADMPHLQIDLNGLKKKYSEKWASGPNGTPDPQSLVDKYVRELDSDYSDMEEEDAP 513

Query: 61  SQEPNEVGITQEEVPSQQGGS 81
           SQEP EVG TQEEVPSQQGGS
Sbjct: 514 SQEPXEVGTTQEEVPSQQGGS 534

[Close]

BLAST of MC02g_new0301 vs. ExPASy TrEMBL
Match: A0A6J1DZB5 (uncharacterized protein LOC111024898 OS=Momordica charantia OX=3673 GN=LOC111024898 PE=4 SV=1)

HSP 1 Score: 156 bits (395), Expect = 9.81e-46
Identity = 81/100 (81.00%), Postives = 87/100 (87.00%), Query Frame = 0


Query: 1   MKGIAADMPHLQIDLGDLKKRYAEKWAFVPNNTLGPQSLVEKYVRDLHSDCSDLEEDDAP 60
           MKGIA DM HLQIDL D+KK+Y+EKWA  PN T GPQSLV+KYVR+L SD SD+EE DAP
Sbjct: 147 MKGIAVDMSHLQIDLSDIKKKYSEKWASGPNGTPGPQSLVDKYVRELDSDYSDVEEGDAP 206

Query: 61  SQEPNEVGITQEEVPSQQGGSQEVNLLGSQGELSSHLESS 100
           SQEPNEVG TQEEVPSQ GGSQEVNLLGSQGELSSHL SS
Sbjct: 207 SQEPNEVGTTQEEVPSQLGGSQEVNLLGSQGELSSHLGSS 246

[Close]

BLAST of MC02g_new0301 vs. ExPASy TrEMBL
Match: A0A6J1DF31 (uncharacterized protein LOC111019909 OS=Momordica charantia OX=3673 GN=LOC111019909 PE=4 SV=1)

HSP 1 Score: 158 bits (400), Expect = 1.07e-45
Identity = 81/100 (81.00%), Postives = 89/100 (89.00%), Query Frame = 0


Query: 1   MKGIAADMPHLQIDLGDLKKRYAEKWAFVPNNTLGPQSLVEKYVRDLHSDCSDLEEDDAP 60
           MKGIAADMPHLQIDL +LKK+Y+EKWA  PN T GPQSLV KYVR+L SD SD+EE+DAP
Sbjct: 216 MKGIAADMPHLQIDLSNLKKKYSEKWASGPNGTPGPQSLVVKYVRELDSDYSDMEEEDAP 275

Query: 61  SQEPNEVGITQEEVPSQQGGSQEVNLLGSQGELSSHLESS 100
           SQEPNE+G TQEEVPSQQ GSQEVNLLGS+GELSSHL SS
Sbjct: 276 SQEPNEIGTTQEEVPSQQDGSQEVNLLGSEGELSSHLGSS 315

[Close]

BLAST of MC02g_new0301 vs. ExPASy TrEMBL
Match: A0A6J1CLV1 (uncharacterized protein LOC111012467 OS=Momordica charantia OX=3673 GN=LOC111012467 PE=4 SV=1)

HSP 1 Score: 157 bits (398), Expect = 2.19e-43
Identity = 81/100 (81.00%), Postives = 87/100 (87.00%), Query Frame = 0


Query: 1   MKGIAADMPHLQIDLGDLKKRYAEKWAFVPNNTLGPQSLVEKYVRDLHSDCSDLEEDDAP 60
           MKGIAAD+PHL++DLGDLKKRYAEKWA  PN T GP SLV+KYVRDL SD SDL+ED+ P
Sbjct: 464 MKGIAADVPHLEVDLGDLKKRYAEKWASGPNGTSGPASLVDKYVRDLDSDYSDLDEDEVP 523

Query: 61  SQEPNEVGITQEEVPSQQGGSQEVNLLGSQGELSSHLESS 100
           SQEP EVG TQE VPSQQ GSQEVNLLGSQGELSSHL SS
Sbjct: 524 SQEPTEVGTTQEGVPSQQDGSQEVNLLGSQGELSSHLGSS 563

[Close]

BLAST of MC02g_new0301 vs. ExPASy TrEMBL
Match: A0A6J1D1N9 (uncharacterized protein LOC111016193 OS=Momordica charantia OX=3673 GN=LOC111016193 PE=4 SV=1)

HSP 1 Score: 127 bits (318), Expect = 1.20e-33
Identity = 62/80 (77.50%), Postives = 68/80 (85.00%), Query Frame = 0


Query: 1   MKGIAADMPHLQIDLGDLKKRYAEKWAFVPNNTLGPQSLVEKYVRDLHSDCSDLEEDDAP 60
           MKGIAADMPHLQIDL DLKKRY+E WA  PN T GPQSLV+KYVR+L SD SD+EE+DAP
Sbjct: 208 MKGIAADMPHLQIDLSDLKKRYSENWASGPNGTPGPQSLVDKYVRELDSDYSDMEEEDAP 267

Query: 61  SQEPNEVGITQEEVPSQQGG 80
           SQEP +VG TQEE PSQ GG
Sbjct: 268 SQEPTKVGTTQEEAPSQLGG 287

[Close]

BLAST of MC02g_new0301 vs. ExPASy TrEMBL
Match: A0A6J1DZB3 (uncharacterized protein LOC111025665 OS=Momordica charantia OX=3673 GN=LOC111025665 PE=4 SV=1)

HSP 1 Score: 129 bits (323), Expect = 8.45e-33
Identity = 64/81 (79.01%), Postives = 70/81 (86.42%), Query Frame = 0


Query: 1   MKGIAADMPHLQIDLGDLKKRYAEKWAFVPNNTLGPQSLVEKYVRDLHSDCSDLEEDDAP 60
           MKGIAADMPHLQIDL  LKK+Y+EKWA  PN T  PQSLV+KYVR+L SD SD+EE+DAP
Sbjct: 454 MKGIAADMPHLQIDLNGLKKKYSEKWASGPNGTPDPQSLVDKYVRELDSDYSDMEEEDAP 513

Query: 61  SQEPNEVGITQEEVPSQQGGS 81
           SQEP EVG TQEEVPSQQGGS
Sbjct: 514 SQEPXEVGTTQEEVPSQQGGS 534

The following BLAST results are available for this feature:

BLAST of MC02g_new0301 vs.


Match Name	E-value	Identity	Description

BLAST of MC02g_new0301 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022158409.1	2.03e-45	81.00	uncharacterized protein LOC111024898 [Momordica charantia]	[more]
XP_022152119.1	2.21e-45	81.00	uncharacterized protein LOC111019909 [Momordica charantia]	[more]
XP_022142326.1	4.52e-43	81.00	uncharacterized protein LOC111012467 [Momordica charantia]	[more]
XP_022147182.1	2.47e-33	77.50	uncharacterized protein LOC111016193 [Momordica charantia]	[more]
XP_022159252.1	1.75e-32	79.01	uncharacterized protein LOC111025665 [Momordica charantia]	[more]

BLAST of MC02g_new0301 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1DZB5	9.81e-46	81.00	uncharacterized protein LOC111024898 OS=Momordica charantia OX=3673 GN=LOC111024...	[more]
A0A6J1DF31	1.07e-45	81.00	uncharacterized protein LOC111019909 OS=Momordica charantia OX=3673 GN=LOC111019...	[more]
A0A6J1CLV1	2.19e-43	81.00	uncharacterized protein LOC111012467 OS=Momordica charantia OX=3673 GN=LOC111012...	[more]
A0A6J1D1N9	1.20e-33	77.50	uncharacterized protein LOC111016193 OS=Momordica charantia OX=3673 GN=LOC111016...	[more]
A0A6J1DZB3	8.45e-33	79.01	uncharacterized protein LOC111025665 OS=Momordica charantia OX=3673 GN=LOC111025...	[more]

BLAST of MC02g_new0301 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description

InterPro

Analysis Name: InterPro Annotations of Bitter gourd (Dali-11) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 51..100
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 64..100

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
MC02g_new0301.1	MC02g_new0301.1	mRNA