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Sequences
The following sequences are available for this feature:
Gene sequence (with intron) Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below. ATGAAAATAGACTCCTCTGTGTCCTGCTCTGCTCTGCAACCATATTCAAGACAGCTTGTGGAACGTGGGAACGACGACAAAGTGCCGTCGCCGGAGACGACGGAGGAGGCAGTTGCTGGCGCGGTGGCGGTGCTGCCTGAGCCCGCGGTAGAAAGCGTTCGCCGCTGCTTCGTACTCGCCTTCTCCGCCTCCGGTATGCTTTCACCTGTTTCTCTCTTTGCGCTGTTCTCTTGTTTTGATATGCGAACCCTAGATTATGGTTTATGGCTGATAAACTTGTTTTTTTTTTTTCTTTTTACCTTTTCGCTTTTTCGATCCTTCACCGTTTTCGATTTTATCCTTCTCTGTTCATCAATTTAAGATTTTCTATTTCTTTTCGGATATGGCGTACTCGAAGTCCGTCCAACCTGCCTTTCCTCCGCAGTCAACTCCTCCCATCAAAGAACATTATCTCGAGATCTTCAGAATGACGCCTCCTCTGGTATCTCTCTACTATTCTCTGATTTCAGTCGCCAAACCCTGGAATTAGGGTTTACGGCAAGTCGTTTTTATTTCTAACTTTTTGTTTCTTGTGGGCTGTCTCCTGATGCGCTAGGTATTGATTCCGTCTCCATGAGACAGAGAACCGAATCCTCGGGGTCGGGGATCCTCGATGTTCCATCTGGCTGTAATGATCGAGTGCTTGAGTAA mRNA sequence ATGAAAATAGACTCCTCTGTGTCCTGCTCTGCTCTGCAACCATATTCAAGACAGCTTGTGGAACGTGGGAACGACGACAAAGTGCCGTCGCCGGAGACGACGGAGGAGGCAGTTGCTGGCGCGGTGGCGGTGCTGCCTGAGCCCGCGGTAGAAAGCGTTCGCCGCTGCTTCGTACTCGCCTTCTCCGCCTCCGGTATTGATTCCGTCTCCATGAGACAGAGAACCGAATCCTCGGGGTCGGGGATCCTCGATGTTCCATCTGGCTGTAATGATCGAGTGCTTGAGTAA Coding sequence (CDS) ATGAAAATAGACTCCTCTGTGTCCTGCTCTGCTCTGCAACCATATTCAAGACAGCTTGTGGAACGTGGGAACGACGACAAAGTGCCGTCGCCGGAGACGACGGAGGAGGCAGTTGCTGGCGCGGTGGCGGTGCTGCCTGAGCCCGCGGTAGAAAGCGTTCGCCGCTGCTTCGTACTCGCCTTCTCCGCCTCCGGTATTGATTCCGTCTCCATGAGACAGAGAACCGAATCCTCGGGGTCGGGGATCCTCGATGTTCCATCTGGCTGTAATGATCGAGTGCTTGAGTAA Protein sequence MKIDSSVSCSALQPYSRQLVERGNDDKVPSPETTEEAVAGAVAVLPEPAVESVRRCFVLAFSASGIDSVSMRQRTESSGSGILDVPSGCNDRVLE
Homology
BLAST of MC02g_new0295 vs. NCBI nr
Match: XP_022156673.1 (uncharacterized protein LOC111023525 [Momordica charantia]) HSP 1 Score: 170 bits (430), Expect = 3.17e-52 Identity = 95/123 (77.24%), Postives = 95/123 (77.24%), Query Frame = 0 Query: 1 MKIDSSVSCSALQPYSRQLVERGNDDKVPSPETTEEAVAGAVAVLPEPAVESVRRCFVLA 60 MKIDSSVSCSALQPYSRQLVERGNDDKVPSPETTEEAVAGAVAVLPEPAVESVRRCFVLA Sbjct: 1 MKIDSSVSCSALQPYSRQLVERGNDDKVPSPETTEEAVAGAVAVLPEPAVESVRRCFVLA 60
Query: 61 FSAS----------------------------GIDSVSMRQRTESSGSGILDVPSGCNDR 95 FSAS GIDSVSMRQRTESSGSGILDVPSGCNDR Sbjct: 61 FSASVRPTCLSSAVNSSHQRTLSRDLQNDASSGIDSVSMRQRTESSGSGILDVPSGCNDR 120
BLAST of MC02g_new0295 vs. ExPASy TrEMBL
Match: A0A6J1DR92 (uncharacterized protein LOC111023525 OS=Momordica charantia OX=3673 GN=LOC111023525 PE=4 SV=1) HSP 1 Score: 170 bits (430), Expect = 1.54e-52 Identity = 95/123 (77.24%), Postives = 95/123 (77.24%), Query Frame = 0 Query: 1 MKIDSSVSCSALQPYSRQLVERGNDDKVPSPETTEEAVAGAVAVLPEPAVESVRRCFVLA 60 MKIDSSVSCSALQPYSRQLVERGNDDKVPSPETTEEAVAGAVAVLPEPAVESVRRCFVLA Sbjct: 1 MKIDSSVSCSALQPYSRQLVERGNDDKVPSPETTEEAVAGAVAVLPEPAVESVRRCFVLA 60
Query: 61 FSAS----------------------------GIDSVSMRQRTESSGSGILDVPSGCNDR 95 FSAS GIDSVSMRQRTESSGSGILDVPSGCNDR Sbjct: 61 FSASVRPTCLSSAVNSSHQRTLSRDLQNDASSGIDSVSMRQRTESSGSGILDVPSGCNDR 120
The following BLAST results are available for this feature:
Match Name | E-value | Identity | Description | |
Match Name | E-value | Identity | Description | |
XP_022156673.1 | 3.17e-52 | 77.24 | uncharacterized protein LOC111023525 [Momordica charantia] | [more] |
Match Name | E-value | Identity | Description | |
A0A6J1DR92 | 1.54e-52 | 77.24 | uncharacterized protein LOC111023525 OS=Momordica charantia OX=3673 GN=LOC111023... | [more] |
Match Name | E-value | Identity | Description | |
InterPro
Analysis Name: InterPro Annotations of Bitter gourd (Dali-11) v1
Date Performed: 2021-10-25
IPR Term | IPR Description | Source | Source Term | Source Description | Alignment |
None | No IPR available | MOBIDB_LITE | mobidb-lite | disorder_prediction | coord: 70..84 |
None | No IPR available | MOBIDB_LITE | mobidb-lite | disorder_prediction | coord: 70..95 |
Relationships
The following mRNA feature(s) are a part of this gene:
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