MC02g_new0268 (gene) Bitter gourd (Dali-11) v1

Overview
NameMC02g_new0268
Typegene
OrganismMomordica charantia cv. Dali-11 (Bitter gourd (Dali-11) v1)
DescriptionUnknown protein
LocationMC02: 11847208 .. 11848120 (-)
RNA-Seq ExpressionMC02g_new0268
SyntenyMC02g_new0268
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ACTCCACCCCTTTTCTTCTCCTCTCCATCAACGGTATGCGTTTTCTCTCAATTTTCGATTTTTTCAGAGGGTTTTCCTTTATGCTTTTTTTCAGTTTTTCGAAGTTCTTTTTTTTCAAGTAGGAAGTAGCATAGATCAAGATATTTCAAGGATTTCTATTGCTGTTGTGGATGCGGTTTTCAAAGAGGATCCTTCTTTCCCGCTAGTTCCTGTGATGGTGGATGGTGGTAGCTGGGTGTCGGGATCACCCCATTGGATGCCAATAGTGTTGTTGCGGCTGACAAAATCAAAAGCAACATCGTTATGTATGGTCCATGGCTTCGTCATCAGGACGTTTTGAAGAGTTACCATGCACTAATCTCTTGGGATGACTCTTCATCTTCGTTGCATTCTAGTTTAGAGAACTTACATGGTTCCAAGGCAAGGATGACAGAGCAGAAGATGGGCGACGATAGAGGTGCGGCAGCCATCGGCTCAAATATCGTTTTGGGATCTTTGGAGGTTATATCAGTCTTAATTGTCTTGAGATCCCTTATCAGCATGATTTTGGGAATTTGTCTAATCCTTCCTTACCTGTCATGGTGGAAGATAAGACAACTTTGGATGCAATTATTTCTCTCCAAATCTCCAAATCCGAAATAAGAGTGCCATAATTGTGAATATGCTTCAATTAATTGAAGAATCTCCCCCAAAGTCATTAAATGAGATTGTGGATGTTGTGACTTTGGAGAAAAGGTCTGGTGGGCTAGAATTTTTTCATATTCCTAATTCTTTGAACATGCAATCTCTTTTATTGACCAAGTATAATGATCGTTTCTATGTCTTTTAGGATAATTGTTTTCTTTTATGGCTTTTATTTGTGGTGCGTTGTCATCCCTCTTCTGATGTAACTCTTAGTGGTACAATTTATTTT

mRNA sequence

ATGTATGGTCCATGGCTTCGTCATCAGGACGTTTTGAAGAGTTACCATGCACTAATCTCTTGGGATGACTCTTCATCTTCGTTGCATTCTAGTTTAGAGAACTTACATGGTTCCAAGGCAAGGATGACAGAGCAGAAGATGGGCGACGATAGAGGTGCGGCAGCCATCGGCTCAAATATCGTTTTGGGATCTTTGGAGGTTATATCAGTCTTAATTGTCTTGAGATCCCTTATCAGCATGATTTTGGGAATTTGTCTAATCCTTCCTTACCTGTCATGGTGGAAGATAAGACAACTTTGGATGCAATTATTTCTCTCCAAATCTCCAAATCCGAAATAA

Coding sequence (CDS)

ATGTATGGTCCATGGCTTCGTCATCAGGACGTTTTGAAGAGTTACCATGCACTAATCTCTTGGGATGACTCTTCATCTTCGTTGCATTCTAGTTTAGAGAACTTACATGGTTCCAAGGCAAGGATGACAGAGCAGAAGATGGGCGACGATAGAGGTGCGGCAGCCATCGGCTCAAATATCGTTTTGGGATCTTTGGAGGTTATATCAGTCTTAATTGTCTTGAGATCCCTTATCAGCATGATTTTGGGAATTTGTCTAATCCTTCCTTACCTGTCATGGTGGAAGATAAGACAACTTTGGATGCAATTATTTCTCTCCAAATCTCCAAATCCGAAATAA

Protein sequence

MYGPWLRHQDVLKSYHALISWDDSSSSLHSSLENLHGSKARMTEQKMGDDRGAAAIGSNIVLGSLEVISVLIVLRSLISMILGICLILPYLSWWKIRQLWMQLFLSKSPNPK
Homology
[Close]
BLAST of MC02g_new0268 vs. NCBI nr
Match: XP_022159860.1 (uncharacterized protein LOC111026150 [Momordica charantia])

HSP 1 Score: 62.8 bits (151), Expect = 6.92e-10
Identity = 37/69 (53.62%), Postives = 41/69 (59.42%), Query Frame = 0 

Query: 1  MYGPWLRHQDVLKSYHALISWDDSSSSLHSSLENLHGSKARMTEQKMGDDRGAAAIGSNI 60
          MYGPW RH DVLKSYHA  +W                   RM EQK+GDD GAA I SN 
Sbjct: 30 MYGPWHRHHDVLKSYHAQ-NW------------------TRMMEQKVGDDGGAATIKSNT 79

Query: 61 VLGSLEVIS 69
          VLGS+EVI+
Sbjct: 90 VLGSVEVIN 79

[Close]
BLAST of MC02g_new0268 vs. ExPASy TrEMBL
Match: A0A6J1DZZ2 (uncharacterized protein LOC111026150 OS=Momordica charantia OX=3673 GN=LOC111026150 PE=4 SV=1)

HSP 1 Score: 62.8 bits (151), Expect = 3.35e-10
Identity = 37/69 (53.62%), Postives = 41/69 (59.42%), Query Frame = 0 

Query: 1  MYGPWLRHQDVLKSYHALISWDDSSSSLHSSLENLHGSKARMTEQKMGDDRGAAAIGSNI 60
          MYGPW RH DVLKSYHA  +W                   RM EQK+GDD GAA I SN 
Sbjct: 30 MYGPWHRHHDVLKSYHAQ-NW------------------TRMMEQKVGDDGGAATIKSNT 79

Query: 61 VLGSLEVIS 69
          VLGS+EVI+
Sbjct: 90 VLGSVEVIN 79

The following BLAST results are available for this feature:
BLAST of MC02g_new0268 vs.
Match NameE-valueIdentityDescription
BLAST of MC02g_new0268 vs. NCBI nr
Match NameE-valueIdentityDescription
XP_022159860.16.92e-1053.62uncharacterized protein LOC111026150 [Momordica charantia][more]
BLAST of MC02g_new0268 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
A0A6J1DZZ23.35e-1053.62uncharacterized protein LOC111026150 OS=Momordica charantia OX=3673 GN=LOC111026... [more]
BLAST of MC02g_new0268 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
MC02g_new0268.1MC02g_new0268.1mRNA