MC02g_new0267 (gene) Bitter gourd (Dali-11) v1

Overview


Name	MC02g_new0267
Type	gene
Organism	Momordica charantia cv. Dali-11 (Bitter gourd (Dali-11) v1)
Description	Unknown protein
Location	MC02: 11814816 .. 11815151 (-)
RNA-Seq Expression	MC02g_new0267
Synteny	MC02g_new0267

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGAAATGACCCTCGGGAAAAGATCATCATACACTAAAGGGATGGGATATGGTCCGAAGCCACCGAGTAAAAAAGCGTCGGCAGGATGCTCACAAGAATACTTTCTCACATTGGAGGCCAGAGTTGCAAGAAATGAAGAATTATTACGAAGCCAACGAGAAGAATTATTAGAGGCACAGCGTTTGCAGGCTGAACAAGCAGCAAGGTCAACACAAGACTTACCTGATATGCAACGACAGGAATATGAGAGAAGATTTAGCCAGATGGAAGAAATTCTCAATAGCTTTAGAGGAGGAGGAGGAAGTTCATCGTTAAGCAAGGTACGAACAATTTGA

mRNA sequence

ATGGAAATGACCCTCGGGAAAAGATCATCATACACTAAAGGGATGGGATATGGTCCGAAGCCACCGAGTAAAAAAGCGTCGGCAGGATGCTCACAAGAATACTTTCTCACATTGGAGGCCAGAGTTGCAAGAAATGAAGAATTATTACGAAGCCAACGAGAAGAATTATTAGAGGCACAGCGTTTGCAGGCTGAACAAGCAGCAAGGTCAACACAAGACTTACCTGATATGCAACGACAGGAATATGAGAGAAGATTTAGCCAGATGGAAGAAATTCTCAATAGCTTTAGAGGAGGAGGAGGAAGTTCATCGTTAAGCAAGGTACGAACAATTTGA

Coding sequence (CDS)

ATGGAAATGACCCTCGGGAAAAGATCATCATACACTAAAGGGATGGGATATGGTCCGAAGCCACCGAGTAAAAAAGCGTCGGCAGGATGCTCACAAGAATACTTTCTCACATTGGAGGCCAGAGTTGCAAGAAATGAAGAATTATTACGAAGCCAACGAGAAGAATTATTAGAGGCACAGCGTTTGCAGGCTGAACAAGCAGCAAGGTCAACACAAGACTTACCTGATATGCAACGACAGGAATATGAGAGAAGATTTAGCCAGATGGAAGAAATTCTCAATAGCTTTAGAGGAGGAGGAGGAAGTTCATCGTTAAGCAAGGTACGAACAATTTGA

Protein sequence

MEMTLGKRSSYTKGMGYGPKPPSKKASAGCSQEYFLTLEARVARNEELLRSQREELLEAQRLQAEQAARSTQDLPDMQRQEYERRFSQMEEILNSFRGGGGSSSLSKVRTI

Homology

[Close]

BLAST of MC02g_new0267 vs. NCBI nr
Match: XP_022148911.1 (uncharacterized protein LOC111017461 [Momordica charantia])

HSP 1 Score: 62.8 bits (151), Expect = 6.01e-09
Identity = 45/110 (40.91%), Postives = 64/110 (58.18%), Query Frame = 0


Query: 1   MEMTLGKRSSYTKGMGYGPKPPSKKASAG-CSQEYFLTLEARVARNEE-LLRSQREELLE 60
           ME  LGKRS+Y  GMGYGPKP   K S+   S EY  +LEAR+ ++EE + R+ +E++ +
Sbjct: 132 METVLGKRSNYVIGMGYGPKPTRNKGSSSKYSDEYVESLEARLQKHEEEMARTTQEQIQK 191

Query: 61  AQRLQAEQAARSTQDLPDMQRQEYERRFSQMEEILNSFRGGGGSSSLSKV 108
           A   Q+               QE+ R+  +M+++   F  GGGSSS SKV
Sbjct: 192 ALEAQS---------------QEFNRKLLEMQQM---FLSGGGSSSTSKV 223

[Close]

BLAST of MC02g_new0267 vs. NCBI nr
Match: XP_022143616.1 (uncharacterized protein LOC111013476 [Momordica charantia])

HSP 1 Score: 61.2 bits (147), Expect = 1.51e-08
Identity = 44/109 (40.37%), Postives = 63/109 (57.80%), Query Frame = 0


Query: 1   MEMTLGKRSSYTKGMGYGPKPPSKKASAG-CSQEYFLTLEARVARNEE-LLRSQREELLE 60
           ME  LGKRS+Y  GMGYGPKP   K S+   S EY  +LEAR+ ++EE + R+ +E++ +
Sbjct: 127 METVLGKRSNYVIGMGYGPKPTRNKGSSSKYSDEYVESLEARLQKHEEEMARTTQEQIQK 186

Query: 61  AQRLQAEQAARSTQDLPDMQRQEYERRFSQMEEILNSFRGGGGSSSLSK 107
           A   Q+               QE+ R+  +M+++   F  GGGSSS SK
Sbjct: 187 ALEAQS---------------QEFNRKLLEMQQM---FLSGGGSSSTSK 217

[Close]

BLAST of MC02g_new0267 vs. NCBI nr
Match: RVX02610.1 (hypothetical protein CK203_016442 [Vitis vinifera])

HSP 1 Score: 50.1 bits (118), Expect = 5.29e-05
Identity = 37/102 (36.27%), Postives = 58/102 (56.86%), Query Frame = 0


Query: 2   EMTLGKRSSYTKGMGYGPKPPSKKASAGCSQEYFLTLEARVARNEELLRSQREELLEAQR 61
           E  LG++S Y KG+G+GPKP S   S   S E+ + LE R+   + L+ +Q+++L E Q+
Sbjct: 23  ERVLGQKSGYVKGLGFGPKPISFSKSRPSSSEHEIELEHRLVETQLLVETQQQQL-ETQQ 82

Query: 62  LQAEQAARSTQDLPDMQRQEYERRFSQMEEILNSFRGGGGSS 103
            + +Q     + L   Q Q++ ++F   EEIL   R   GSS
Sbjct: 83  DRIDQL----EALVQKQNQQHHQQF---EEILRHLRSSQGSS 116

[Close]

BLAST of MC02g_new0267 vs. NCBI nr
Match: RVW22435.1 (hypothetical protein CK203_099249 [Vitis vinifera] >RVW55019.1 hypothetical protein CK203_117383 [Vitis vinifera] >RVX21492.1 hypothetical protein CK203_002255 [Vitis vinifera])

HSP 1 Score: 48.5 bits (114), Expect = 2.06e-04
Identity = 37/102 (36.27%), Postives = 57/102 (55.88%), Query Frame = 0


Query: 2   EMTLGKRSSYTKGMGYGPKPPSKKASAGCSQEYFLTLEARVARNEELLRSQREELLEAQR 61
           E  LG++S Y KG+G+GPKP S   S   S E  + LE R+   + L+ +Q+++L E Q+
Sbjct: 23  ERVLGQKSGYVKGLGFGPKPISFSKSRPSSSEREIELEHRLVETQLLVETQQQQL-ETQQ 82

Query: 62  LQAEQAARSTQDLPDMQRQEYERRFSQMEEILNSFRGGGGSS 103
            + +Q     + L   Q Q++ ++F   EEIL   R   GSS
Sbjct: 83  DRIDQL----EALVQKQNQQHHQQF---EEILRHLRSSQGSS 116

[Close]

BLAST of MC02g_new0267 vs. NCBI nr
Match: RVW24414.1 (hypothetical protein CK203_093199 [Vitis vinifera])

HSP 1 Score: 50.1 bits (118), Expect = 2.91e-04
Identity = 37/102 (36.27%), Postives = 58/102 (56.86%), Query Frame = 0


Query: 2   EMTLGKRSSYTKGMGYGPKPPSKKASAGCSQEYFLTLEARVARNEELLRSQREELLEAQR 61
           E  LG++S Y KG+G+GPKP S   S   S E+ + LE R+   + L+ +Q+++L E Q+
Sbjct: 253 ERVLGQKSGYVKGLGFGPKPISFSKSRPSSSEHEIELEHRLVETQLLVETQQQQL-ETQQ 312

Query: 62  LQAEQAARSTQDLPDMQRQEYERRFSQMEEILNSFRGGGGSS 103
            + +Q     + L   Q Q++ ++F   EEIL   R   GSS
Sbjct: 313 DRIDQL----EALVQKQNQQHHQQF---EEILRHLRSSQGSS 346

[Close]

BLAST of MC02g_new0267 vs. ExPASy TrEMBL
Match: A0A6J1D6S9 (uncharacterized protein LOC111017461 OS=Momordica charantia OX=3673 GN=LOC111017461 PE=4 SV=1)

HSP 1 Score: 62.8 bits (151), Expect = 2.91e-09
Identity = 45/110 (40.91%), Postives = 64/110 (58.18%), Query Frame = 0


Query: 1   MEMTLGKRSSYTKGMGYGPKPPSKKASAG-CSQEYFLTLEARVARNEE-LLRSQREELLE 60
           ME  LGKRS+Y  GMGYGPKP   K S+   S EY  +LEAR+ ++EE + R+ +E++ +
Sbjct: 132 METVLGKRSNYVIGMGYGPKPTRNKGSSSKYSDEYVESLEARLQKHEEEMARTTQEQIQK 191

Query: 61  AQRLQAEQAARSTQDLPDMQRQEYERRFSQMEEILNSFRGGGGSSSLSKV 108
           A   Q+               QE+ R+  +M+++   F  GGGSSS SKV
Sbjct: 192 ALEAQS---------------QEFNRKLLEMQQM---FLSGGGSSSTSKV 223

[Close]

BLAST of MC02g_new0267 vs. ExPASy TrEMBL
Match: A0A6J1CQT5 (uncharacterized protein LOC111013476 OS=Momordica charantia OX=3673 GN=LOC111013476 PE=4 SV=1)

HSP 1 Score: 61.2 bits (147), Expect = 7.30e-09
Identity = 44/109 (40.37%), Postives = 63/109 (57.80%), Query Frame = 0


Query: 1   MEMTLGKRSSYTKGMGYGPKPPSKKASAG-CSQEYFLTLEARVARNEE-LLRSQREELLE 60
           ME  LGKRS+Y  GMGYGPKP   K S+   S EY  +LEAR+ ++EE + R+ +E++ +
Sbjct: 127 METVLGKRSNYVIGMGYGPKPTRNKGSSSKYSDEYVESLEARLQKHEEEMARTTQEQIQK 186

Query: 61  AQRLQAEQAARSTQDLPDMQRQEYERRFSQMEEILNSFRGGGGSSSLSK 107
           A   Q+               QE+ R+  +M+++   F  GGGSSS SK
Sbjct: 187 ALEAQS---------------QEFNRKLLEMQQM---FLSGGGSSSTSK 217

[Close]

BLAST of MC02g_new0267 vs. ExPASy TrEMBL
Match: A0A438J0Y3 (Uncharacterized protein OS=Vitis vinifera OX=29760 GN=CK203_016442 PE=4 SV=1)

HSP 1 Score: 50.1 bits (118), Expect = 2.56e-05
Identity = 37/102 (36.27%), Postives = 58/102 (56.86%), Query Frame = 0


Query: 2   EMTLGKRSSYTKGMGYGPKPPSKKASAGCSQEYFLTLEARVARNEELLRSQREELLEAQR 61
           E  LG++S Y KG+G+GPKP S   S   S E+ + LE R+   + L+ +Q+++L E Q+
Sbjct: 23  ERVLGQKSGYVKGLGFGPKPISFSKSRPSSSEHEIELEHRLVETQLLVETQQQQL-ETQQ 82

Query: 62  LQAEQAARSTQDLPDMQRQEYERRFSQMEEILNSFRGGGGSS 103
            + +Q     + L   Q Q++ ++F   EEIL   R   GSS
Sbjct: 83  DRIDQL----EALVQKQNQQHHQQF---EEILRHLRSSQGSS 116

[Close]

BLAST of MC02g_new0267 vs. ExPASy TrEMBL
Match: A0A438KJW0 (Uncharacterized protein OS=Vitis vinifera OX=29760 GN=CK203_002255 PE=4 SV=1)

HSP 1 Score: 48.5 bits (114), Expect = 9.99e-05
Identity = 37/102 (36.27%), Postives = 57/102 (55.88%), Query Frame = 0


Query: 2   EMTLGKRSSYTKGMGYGPKPPSKKASAGCSQEYFLTLEARVARNEELLRSQREELLEAQR 61
           E  LG++S Y KG+G+GPKP S   S   S E  + LE R+   + L+ +Q+++L E Q+
Sbjct: 23  ERVLGQKSGYVKGLGFGPKPISFSKSRPSSSEREIELEHRLVETQLLVETQQQQL-ETQQ 82

Query: 62  LQAEQAARSTQDLPDMQRQEYERRFSQMEEILNSFRGGGGSS 103
            + +Q     + L   Q Q++ ++F   EEIL   R   GSS
Sbjct: 83  DRIDQL----EALVQKQNQQHHQQF---EEILRHLRSSQGSS 116

[Close]

BLAST of MC02g_new0267 vs. ExPASy TrEMBL
Match: A0A438CMH8 (Uncharacterized protein OS=Vitis vinifera OX=29760 GN=CK203_093199 PE=4 SV=1)

HSP 1 Score: 50.1 bits (118), Expect = 1.41e-04
Identity = 37/102 (36.27%), Postives = 58/102 (56.86%), Query Frame = 0


Query: 2   EMTLGKRSSYTKGMGYGPKPPSKKASAGCSQEYFLTLEARVARNEELLRSQREELLEAQR 61
           E  LG++S Y KG+G+GPKP S   S   S E+ + LE R+   + L+ +Q+++L E Q+
Sbjct: 253 ERVLGQKSGYVKGLGFGPKPISFSKSRPSSSEHEIELEHRLVETQLLVETQQQQL-ETQQ 312

Query: 62  LQAEQAARSTQDLPDMQRQEYERRFSQMEEILNSFRGGGGSS 103
            + +Q     + L   Q Q++ ++F   EEIL   R   GSS
Sbjct: 313 DRIDQL----EALVQKQNQQHHQQF---EEILRHLRSSQGSS 346

The following BLAST results are available for this feature:

BLAST of MC02g_new0267 vs.


Match Name	E-value	Identity	Description

BLAST of MC02g_new0267 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022148911.1	6.01e-09	40.91	uncharacterized protein LOC111017461 [Momordica charantia]	[more]
XP_022143616.1	1.51e-08	40.37	uncharacterized protein LOC111013476 [Momordica charantia]	[more]
RVX02610.1	5.29e-05	36.27	hypothetical protein CK203_016442 [Vitis vinifera]	[more]
RVW22435.1	2.06e-04	36.27	hypothetical protein CK203_099249 [Vitis vinifera] >RVW55019.1 hypothetical prot...	[more]
RVW24414.1	2.91e-04	36.27	hypothetical protein CK203_093199 [Vitis vinifera]	[more]

BLAST of MC02g_new0267 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1D6S9	2.91e-09	40.91	uncharacterized protein LOC111017461 OS=Momordica charantia OX=3673 GN=LOC111017...	[more]
A0A6J1CQT5	7.30e-09	40.37	uncharacterized protein LOC111013476 OS=Momordica charantia OX=3673 GN=LOC111013...	[more]
A0A438J0Y3	2.56e-05	36.27	Uncharacterized protein OS=Vitis vinifera OX=29760 GN=CK203_016442 PE=4 SV=1	[more]
A0A438KJW0	9.99e-05	36.27	Uncharacterized protein OS=Vitis vinifera OX=29760 GN=CK203_002255 PE=4 SV=1	[more]
A0A438CMH8	1.41e-04	36.27	Uncharacterized protein OS=Vitis vinifera OX=29760 GN=CK203_093199 PE=4 SV=1	[more]

BLAST of MC02g_new0267 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description

InterPro

Analysis Name: InterPro Annotations of Bitter gourd (Dali-11) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	COILS	Coil	Coil	coord: 42..65
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..28

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
MC02g_new0267.1	MC02g_new0267.1	mRNA