MC02g_new0233 (gene) Bitter gourd (Dali-11) v1

Overview
NameMC02g_new0233
Typegene
OrganismMomordica charantia cv. Dali-11 (Bitter gourd (Dali-11) v1)
DescriptionUnknown protein
LocationMC02: 10027990 .. 10033748 (-)
RNA-Seq ExpressionMC02g_new0233
SyntenyMC02g_new0233
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGAGACTCTATCTACAATGGAGATCGAATTAGTCTATCGGCTCGGGGTACCTGAAACTCCTCAGTATTCTCCTCCTCCTGGTTCGGTGAAGATAAACGTGGATGCAGCATGCAGAAACACAGAGTTCAGAATAGGAATCGGAGAAATCCTTGCAGCTATGACAAGAAGATTGGAAGTGTATTTTGCCCTGTTGAATGCTGAGACATTAGCAATTCTTGAGGGCCTAAGGCTGGCAAGGGATCAAGTGTTTGGGTTGAAGATATTTGTAAGTTTGCTTAAGGATTCCTCTTACATATTTAAGTTCAAGCACAAGAGATCTATTTAAAAAACTAAGGGTTTTATTTTGTGGAAAACAAAAAATTATAATGATGCTTACTTCTTAACTCTGGGTTAAAAAATACATTTGCTCCCCGGACTTTCACTGGAGTAACAATTTAATCATTGAGTTTTTGTTTGTAACGATTTAGTCCATATACTTTCATTGTAACAATTTTCCGATTTAATCCCTGTCATTTAAAATTATAAATTTATAATGACTAAATTATTACCAACTTTAAATTACTAAGGACAAAATTGTTACATATTAAAGTATTGTTATCAATCTAAAAGTAAAGAGACTAAATCGTTACAAAGTAAAGTTCAGGGACTAAATTGTTACTTTAGCCAAATTACAGGATCAAAAGTGTTTTTTAACCTTAACTATTTGATTTGTTTGGTATGTTTTTCACCTCTTTCAAAAACACATTTGATTTCTTAGCTACATTTAAAAAACAAAAGCATATTGGATTTCTTGGCTAAGATTTTGAAAATCTTTTTAATAACAAAGGAAACATACAGGTAAGCATAACTTTCAAAGACAAACACTAGAATAAAACGGGGAGGCTCATAAAATAATTTATTTGTTTTTTCTTTTATAAAGTATTTATCTAATATTTCAAAACTACCTAAAAAAAGGAAAAAAAAATTCCTACGCAACTGGCAAGCGTTTTTATTTTTAGAAAACTTAACACTAAAAACCAATTAAATTGTTATCAAACAAACAACAAATTTGAAATTTGATACGATTATGATATGTTTAAAATGAATCACAAATTTAGGTCAGCAAAATTTCGAATGGATCAGAATCCATATAATTAGGCAAATGAATAGGAATACGTTGTTGGCTTCTGTTTAGGCTTCATAATCTCAACAGTCAACAAGTATCTGTTTCCCTTAAAAATCTCAACCCTAACTTTCTTTTTTCCCTTTTTTCTGTCTCCTTCCTGCAAATTTTTTTTGTTTTTGTTTTTGTTTTTGTTTTTGTTTTTGTTTTTGTTTTTGTTGAGTGAAAGATTGAGAGGTTGATGAGTTGAATTGTTGAATATAGAATGGATGACAAATCGCTCCCTTATAATCTTCGACTACGAAAGGCTTCTGCTACAACTGAACCTTCCAAGATCAACCAGAAGCATGAAAGAGATTTTCAGGTAATATCCTTTTTGTTTTATCAATATTAAGGTTCATATACATATTTTTTGTTTGTTTAATCTTGAGTAGCGTTTGTTGAGGATCCCATGGTGAAAGATTTACAATAGACATGGCTATTCAGATGTAACCATGAATGTTAATAGCGTTTTATTGTTTTTTTTACCTATCTTCCCGAAAAAAGAGGTGATAGTTAATTATATGAATAAAAGAAAAGATAGTTAAAATAATTGATTGGCATTATGTTTAATATTTATTTAGGAAAAAGGAGATGAAGAAGTAGGTTTGGAGCAACGATGTGAAAAATGTGGGTGTCGTTTTGACCTTGAAATCTCTCTTCATTCACACCATTGCATGGTAATGGAAAATGAAGTAGTACCAGAGATATTGGAGCAAAATAATAATAATAATAATAATAATAATAATAATAATAAATCCTTCAGAAAAAGAAGCAGGAAAGGAATACCAAGACGGGCTCCTCTTTTGTAGAACTTTTTTTTTTTTAACATTCTTTTTTCAATCTTCAATGAAGATATTTATAGGGTAGCCAAAATGTTGTTCATATATATAACTATTTCATGGGATTTCTTTAGCTCATTTTCTTAAATATAGTTGAGTTATGGAGGAGCATCGGTGTGGTATTCGTTCTTTATTTTTAGAATGGGATTGTTTTGTGACACCTTGAATCAAGCTTTTGTTGCAACCATTTTCAAACTAAATAAACACTTGAATCTTATGAAACGTTGATGCTAATCCTAATATATATATATAAAAGGAACAACCCGTAAGGGTCCAAACGAATTCTTAATTAGAAATCGAGGATCTTTCTAAATTGATTCTTTTATTACATTCTAAAATTTTTCTATCGTTGAATAGATCTATTTGAAAACAATTATATGCTGACAAAATTTTCAAAGATTGGCGTTCTTTATTCCTATTCAACAACAAATATACGAATAGTTCCTCTCAAGAAGAAAATAAGAGATTTCCAACTACTGACTCTAATAAGACGCAGAAAGAAGGTCAACCTCACTCCAGGTAATCATCGCTTTCCTTCCCCTCGAGTCAAAGAGTAAGAACTCACTTTTGAGCTATGCTATGATTCAATTTTTTCTCTGAAGATATGAAAGAATCAAAATTCAAAAAGTCTTCTTGTAATTATAATGCCCAAATATCAAGTCAGCTCATTCGTATTTATATTGATCATTAGGGCCTTAGCACCTAGTATAACGGCCACAGTGCAACAACAAGAACCAGTTTGACTTAGGGGTGGTGATTTAGTGGCAGTGGACGGCTCCCATTAGACAGATCAATGATACCAGGCATGGGATACACGGGCAGGAGAGCTTATTTGACCGGACAGACTAGATGAGCGAGATCGATTTAAAGCGAAAGTTGACATGTGAGGGAAAATAGGAGTCTGTGGTGGCATGACTTACCACGTTAGCTTCCAGGATGAATGCTTTTTTCGTTCATCTCGCGTGATCGATGGATGGGGGAATTGCGTGAATGACGAGACCGGTTTAACCTAAGCGCAAGTGTACACCTGTCACAAGTAGTAAAACGGAACGAGTATTTCGAGTATCGATCCTCAGGGACAAATGAAGTTTTTTAATGAAAATGATGTTGATCGGTGACTTTGTAATTGATTTTGGGGTAACAAATGATAAGGATAATGCTGGTTTTGATATTTAAAGACTTAATGCAATAAACACAGCTCATTTTCCAACTATGCACCATGCACCTCTCATAAATTTTCTTCGATTTTACTTCGCCATCTTCTTATGTCTAAAGTGATTTTGAAGGTATAAGTTTATTCCTAATATGTCTATTAGAAAAAAGATCTTAATTTAATAAAAATCAACCGTAACCTTAGGTCGAGGTCCTATGTCTAGGTTACTCGAGCGAAATCTTTAAAGTATTTCTCTCCAAAGTTGTATCAGTATTGATGCTTGGTTATAAAAACAACTTTTAAGTGATAAAAGAAGAGAAAAACGTTTTTTGCCTTTGTTGGATTTAAAAACTTTAGCCAATTATCCATAACCGGGCTTGGGAAAATAAATTTAGTTGTGTTGATGGAAGTAGACGACATGATTAAAAGATGAATATGGTTAGGAGGTTGAGAGTTTTGTGGAGAGCCATTCATTTCAAACACTTTTGGGAAGCTTCAAATCACACCCTACACAAAATTGTAATTTCCGTTAGAAATCAACTCTAGATGATGTAAAAACGTCTTATATGCATGTATAACCTAAGGTAACTCCAAGTGAAAGATTTTGGACACTATAATAAGCTTAAAATACGGTTTCTGAGTATAAAACATTAGAAAACAACACCAATTTAGCTTCTTTTTACCCTTATAAACAAGGAAAATTAGGTATAAAAATCCATACATCCACCCTCGACGCAAAAGCGCTTAGCAAAGTCAAATACAACAGGCACGCGGTCAGAGTCCTGGTCTCCTCCCACTGCTTGGAAGCTTACAATTTCATCACTTAATGAATCACACGTTTTTCAAAGCATTACTATTCTTGAGTGCAGGTTCGGTGATTCATGCCATGTCGGATGAGCAAGATATGCAGAAGATTGGGGTGCTTGCGTTGGAAAGGTTCTTTGTGCCAAAGCCATTTATAAGCCCTCAAGTAGGTAACCCCGAAAGAGGGAAGAGATTTTCGGGTGGGGAAGGTCTGGAAAGCCCTTACTTTATTGATGGGACATTTTGATCTCCTTTTCCTCTCAACCCGGTTCTCATTCAGGAAAGGGTCAACACAAGGATCTTACTTCGAAGCCGAAAAATGGGAGTTTTCAAAAGCTTGCTCCCTAGTCATGCTCCAGTCTCAACATGCTGGGTTGAGGAAGTGTCTGATTTCCAACATTCCCTACCATCACCACAATTAATGCTATTAAGACTTTCTGGCTTTGTGAGGAAGATCCCTCCCACTAGATCATCCTAACTCCTACGTTCAGACTTCCAAAGGCGATACTAAAGGTCTTCCTGTTCCTTCATCTGGCTTCTATTCTTCATGTAGTATTCAGACTGAATTACTCTATGAAATTACATCGATACTTCCATATATTACGAGTAACGTAGGAGACATTTTTATTTTTCCTAAAACATCGTATTTCTAAATTCTGATACGGCCCCCTAAACCTCTTGGCTGTCTCTGCACTTCTACCTCCTTTTATCACTGAGCGGTCATTTAGGGGCCTTAGCAGGTGATTTGGGCGGTTTCCCTCTCGACGATGAAGCTTATCCCTCATCGTCTCACGGTCGAGCCATCATAAATGGTTCCGGAGACGGCGGCATAGAATCACCCGCTTTTGTTGCTCCCATTGGAGGGTTCAGAGAGACATTTGATGCAGGAGCCTCTTCACTGGTACTTCATTTCCGAGGGTCATATGCAGCTACAGTGCTCTGTAGGACTTCAACCCACAACATCGTGTTTTAGAGACCCATGTTCTACCAAACTGAACTAAGAGCGTCTTTCTGCTGATGCCTATAGCTTTCCTCCTGCCTTTGCAGGGTGGTATCGCTCTCTAAATGTTGGGTCTACTGGCCTTCTAATTTTGAGACATTATGACTTTGGAGTGATTTCTTCGTGGACACCCTTACGCTCTCTGCTCTCGCTTATTTCATGTACACATGTTAACTGGACTCTATCCCAGTGCGAGAAATTCAGCACGACGAGAACTTGGAATTGATAGGATTAGCATCTCTCAGAGGTCAGGAGAATAAATAGGCATGAGGAAGAGTGAGAGGGGGGCTACGAGCCCTCTCCCGTTGCTGCTCCCGGATCACTCATCCCTTCTTTCCCATTCGCCCGACTTGGTGAGATCCGACCCTTCATTTAAACACAAGCTGGAGATGTATCGGCCTATATTCGGGCGATTCTGTAACCGTAGGCAGCTCAGACAGTCTGCGATTCTTGCCTTGGCAGAGTAGATGACTTCCATCTCTAAATAAAAGAGAAAGCTTCTACCTCTCTCCCTTCTTTTGAGTCTACGTGCGTGGTTCGTTCGATAAATTCCTACCTCTCTATATATCTCTGAGATGTTTGGATTTTTCAAAACTTCATGTCTGAACTCTCTTTTCCCTCTTCAGGCACTACAGAGTCTCCGCCTCAACAGATCTCCGACAACTCAAACTCGACTCCTGAATGGTGGCTTAAGGAAGCAAGGAGGCTCGCGGAACACATCTTTCTGGATGATGAAGCCCTATTTGCCAACATTTCAAATAGTTGGTGGATCGGAAATCTAACCCAACGAAGAAAACGCCTACGACTAAGTCAGTAA

mRNA sequence

ATGGAGACTCTATCTACAATGGAGATCGAATTAGTCTATCGGCTCGGGGTACCTGAAACTCCTCAGTATTCTCCTCCTCCTGGTTCGGTGAAGATAAACGTGGATGCAGCATGCAGAAACACAGAGTTCAGAATAGGAATCGGAGAAATCCTTGCAGCTATGACAAGAAGATTGGAAGTGTATTTTGCCCTGTTGAATGCTGAGACATTAGCAATTCTTGAGGGCCTAAGGCTGGCAAGGGATCAAGTGTTTGGGTTGAAGATATTTGTAAGTTCGGTGATTCATGCCATGTCGGATGAGCAAGATATGCAGAAGATTGGGGTGCTTGCGTTGGAAAGGTTCTTTGTGCCAAAGCCATTTATAAGCCCTCAAGTAGTGCGAGAAATTCAGCACGACGAGAACTTGGAATTGATAGGATTAGCATCTCTCAGAGGCACTACAGAGTCTCCGCCTCAACAGATCTCCGACAACTCAAACTCGACTCCTGAATGGTGGCTTAAGGAAGCAAGGAGGCTCGCGGAACACATCTTTCTGGATGATGAAGCCCTATTTGCCAACATTTCAAATAGTTGGTGGATCGGAAATCTAACCCAACGAAGAAAACGCCTACGACTAAGTCAGTAA

Coding sequence (CDS)

ATGGAGACTCTATCTACAATGGAGATCGAATTAGTCTATCGGCTCGGGGTACCTGAAACTCCTCAGTATTCTCCTCCTCCTGGTTCGGTGAAGATAAACGTGGATGCAGCATGCAGAAACACAGAGTTCAGAATAGGAATCGGAGAAATCCTTGCAGCTATGACAAGAAGATTGGAAGTGTATTTTGCCCTGTTGAATGCTGAGACATTAGCAATTCTTGAGGGCCTAAGGCTGGCAAGGGATCAAGTGTTTGGGTTGAAGATATTTGTAAGTTCGGTGATTCATGCCATGTCGGATGAGCAAGATATGCAGAAGATTGGGGTGCTTGCGTTGGAAAGGTTCTTTGTGCCAAAGCCATTTATAAGCCCTCAAGTAGTGCGAGAAATTCAGCACGACGAGAACTTGGAATTGATAGGATTAGCATCTCTCAGAGGCACTACAGAGTCTCCGCCTCAACAGATCTCCGACAACTCAAACTCGACTCCTGAATGGTGGCTTAAGGAAGCAAGGAGGCTCGCGGAACACATCTTTCTGGATGATGAAGCCCTATTTGCCAACATTTCAAATAGTTGGTGGATCGGAAATCTAACCCAACGAAGAAAACGCCTACGACTAAGTCAGTAA

Protein sequence

METLSTMEIELVYRLGVPETPQYSPPPGSVKINVDAACRNTEFRIGIGEILAAMTRRLEVYFALLNAETLAILEGLRLARDQVFGLKIFVSSVIHAMSDEQDMQKIGVLALERFFVPKPFISPQVVREIQHDENLELIGLASLRGTTESPPQQISDNSNSTPEWWLKEARRLAEHIFLDDEALFANISNSWWIGNLTQRRKRLRLSQ
Homology
[Close]
BLAST of MC02g_new0233 vs. NCBI nr
Match: XP_022142956.1 (uncharacterized protein LOC111012950 [Momordica charantia])

HSP 1 Score: 55.1 bits (131), Expect = 1.58e-05
Identity = 32/60 (53.33%), Postives = 40/60 (66.67%), Query Frame = 0 

Query: 28 GSVKINVDAACRNTEFRIGIG--------EILAAMTRRLEVYFALLNAETLAILEGLRLA 79
          G +KINVD AC+  +FR  IG        +ILAA +RR+E Y   L AE+LA+LEGLRLA
Sbjct: 31 GWIKINVDVACKKHQFRTAIGIVCRNEKGQILAAASRRMEAYHDPLMAESLALLEGLRLA 90

[Close]
BLAST of MC02g_new0233 vs. NCBI nr
Match: XP_022154440.1 (uncharacterized protein LOC111021711 [Momordica charantia])

HSP 1 Score: 54.7 bits (130), Expect = 5.88e-05
Identity = 34/70 (48.57%), Postives = 43/70 (61.43%), Query Frame = 0 

Query: 25  PPPGSVKINVDAACRNTEFRIGIG--------EILAAMTRRLEVYFALLNAETLAILEGL 84
           P P  VKINVD AC+ +  R GIG        EI+ AM R+L+V++  L  ETLAILEGL
Sbjct: 131 PSPDWVKINVDTACKLSNSRTGIGVVCQNDKGEIIVAMIRKLDVFYEPLQVETLAILEGL 190

[Close]
BLAST of MC02g_new0233 vs. ExPASy TrEMBL
Match: A0A6J1CNR4 (uncharacterized protein LOC111012950 OS=Momordica charantia OX=3673 GN=LOC111012950 PE=4 SV=1)

HSP 1 Score: 55.1 bits (131), Expect = 7.66e-06
Identity = 32/60 (53.33%), Postives = 40/60 (66.67%), Query Frame = 0 

Query: 28 GSVKINVDAACRNTEFRIGIG--------EILAAMTRRLEVYFALLNAETLAILEGLRLA 79
          G +KINVD AC+  +FR  IG        +ILAA +RR+E Y   L AE+LA+LEGLRLA
Sbjct: 31 GWIKINVDVACKKHQFRTAIGIVCRNEKGQILAAASRRMEAYHDPLMAESLALLEGLRLA 90

[Close]
BLAST of MC02g_new0233 vs. ExPASy TrEMBL
Match: A0A6J1DJL6 (uncharacterized protein LOC111021711 OS=Momordica charantia OX=3673 GN=LOC111021711 PE=4 SV=1)

HSP 1 Score: 54.7 bits (130), Expect = 2.84e-05
Identity = 34/70 (48.57%), Postives = 43/70 (61.43%), Query Frame = 0 

Query: 25  PPPGSVKINVDAACRNTEFRIGIG--------EILAAMTRRLEVYFALLNAETLAILEGL 84
           P P  VKINVD AC+ +  R GIG        EI+ AM R+L+V++  L  ETLAILEGL
Sbjct: 131 PSPDWVKINVDTACKLSNSRTGIGVVCQNDKGEIIVAMIRKLDVFYEPLQVETLAILEGL 190

The following BLAST results are available for this feature:
BLAST of MC02g_new0233 vs.
Match NameE-valueIdentityDescription
BLAST of MC02g_new0233 vs. NCBI nr
Match NameE-valueIdentityDescription
XP_022142956.11.58e-0553.33uncharacterized protein LOC111012950 [Momordica charantia][more]
XP_022154440.15.88e-0548.57uncharacterized protein LOC111021711 [Momordica charantia][more]
BLAST of MC02g_new0233 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
A0A6J1CNR47.66e-0653.33uncharacterized protein LOC111012950 OS=Momordica charantia OX=3673 GN=LOC111012... [more]
A0A6J1DJL62.84e-0548.57uncharacterized protein LOC111021711 OS=Momordica charantia OX=3673 GN=LOC111021... [more]
BLAST of MC02g_new0233 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
MC02g_new0233.1MC02g_new0233.1mRNA