MC02g_new0160 (gene) Bitter gourd (Dali-11) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.ATGGGGTTTCGTCTTCCATCGTCTCTGGCCAAGCAATTGCTGAGGAGGAGTTCGGGAAATACATCCGCCGTGCCGAAAGGTCATGTCGCCGTCTACGTCGGAGAGTTCCAGAGGAAGCGATTTGTGATTCCGATTTCGTATTTGAATCATCTTTCGTTCCAGCAGCTTCTCAGTCGAGCGGAGGAAGAGTTCGGATTCGATCATCCGGAGGGCGGTTTGACGATTCCTTGTGGAGAAGAGGCGTTTATCGATCTCACTTCTAGATTGCAATTGCAAGTCTCTTAA ATGGGGTTTCGTCTTCCATCGTCTCTGGCCAAGCAATTGCTGAGGAGGAGTTCGGGAAATACATCCGCCGTGCCGAAAGGTCATGTCGCCGTCTACGTCGGAGAGTTCCAGAGGAAGCGATTTGTGATTCCGATTTCGTATTTGAATCATCTTTCGTTCCAGCAGCTTCTCAGTCGAGCGGAGGAAGAGTTCGGATTCGATCATCCGGAGGGCGGTTTGACGATTCCTTGTGGAGAAGAGGCGTTTATCGATCTCACTTCTAGATTGCAATTGCAAGTCTCTTAA ATGGGGTTTCGTCTTCCATCGTCTCTGGCCAAGCAATTGCTGAGGAGGAGTTCGGGAAATACATCCGCCGTGCCGAAAGGTCATGTCGCCGTCTACGTCGGAGAGTTCCAGAGGAAGCGATTTGTGATTCCGATTTCGTATTTGAATCATCTTTCGTTCCAGCAGCTTCTCAGTCGAGCGGAGGAAGAGTTCGGATTCGATCATCCGGAGGGCGGTTTGACGATTCCTTGTGGAGAAGAGGCGTTTATCGATCTCACTTCTAGATTGCAATTGCAAGTCTCTTAA MGFRLPSSLAKQLLRRSSGNTSAVPKGHVAVYVGEFQRKRFVIPISYLNHLSFQQLLSRAEEEFGFDHPEGGLTIPCGEEAFIDLTSRLQLQVS Homology
BLAST of MC02g_new0160 vs. ExPASy Swiss-Prot
Match: Q9FK62 (Auxin-responsive protein SAUR24 OS=Arabidopsis thaliana OX=3702 GN=SAUR24 PE=2 SV=1) HSP 1 Score: 120.6 bits (301), Expect = 9.8e-27 Identity = 55/81 (67.90%), Postives = 69/81 (85.19%), Query Frame = 0
BLAST of MC02g_new0160 vs. ExPASy Swiss-Prot
Match: Q9FJF7 (Auxin-responsive protein SAUR22 OS=Arabidopsis thaliana OX=3702 GN=SAUR22 PE=2 SV=1) HSP 1 Score: 117.5 bits (293), Expect = 8.3e-26 Identity = 53/81 (65.43%), Postives = 68/81 (83.95%), Query Frame = 0
BLAST of MC02g_new0160 vs. ExPASy Swiss-Prot
Match: Q9FJG0 (Auxin-responsive protein SAUR20 OS=Arabidopsis thaliana OX=3702 GN=SAUR20 PE=1 SV=1) HSP 1 Score: 117.1 bits (292), Expect = 1.1e-25 Identity = 54/81 (66.67%), Postives = 67/81 (82.72%), Query Frame = 0
BLAST of MC02g_new0160 vs. ExPASy Swiss-Prot
Match: Q9FJF6 (Auxin-responsive protein SAUR23 OS=Arabidopsis thaliana OX=3702 GN=SAUR23 PE=2 SV=1) HSP 1 Score: 116.3 bits (290), Expect = 1.9e-25 Identity = 53/81 (65.43%), Postives = 68/81 (83.95%), Query Frame = 0
BLAST of MC02g_new0160 vs. ExPASy Swiss-Prot
Match: Q9FJG1 (Auxin-responsive protein SAUR19 OS=Arabidopsis thaliana OX=3702 GN=SAUR19 PE=2 SV=1) HSP 1 Score: 112.8 bits (281), Expect = 2.0e-24 Identity = 52/81 (64.20%), Postives = 67/81 (82.72%), Query Frame = 0
BLAST of MC02g_new0160 vs. NCBI nr
Match: XP_022146177.1 (auxin-responsive protein SAUR24-like [Momordica charantia]) HSP 1 Score: 189 bits (479), Expect = 2.47e-60 Identity = 94/94 (100.00%), Postives = 94/94 (100.00%), Query Frame = 0
BLAST of MC02g_new0160 vs. NCBI nr
Match: XP_008457626.1 (PREDICTED: auxin-responsive protein SAUR24-like [Cucumis melo] >KAA0045667.1 auxin-responsive protein SAUR24-like [Cucumis melo var. makuwa] >TYJ99616.1 auxin-responsive protein SAUR24-like [Cucumis melo var. makuwa]) HSP 1 Score: 173 bits (439), Expect = 3.23e-54 Identity = 88/93 (94.62%), Postives = 89/93 (95.70%), Query Frame = 0
BLAST of MC02g_new0160 vs. NCBI nr
Match: XP_023512614.1 (auxin-responsive protein SAUR24-like [Cucurbita pepo subsp. pepo] >KAG6571064.1 Auxin-responsive protein SAUR24, partial [Cucurbita argyrosperma subsp. sororia]) HSP 1 Score: 171 bits (434), Expect = 1.87e-53 Identity = 86/93 (92.47%), Postives = 89/93 (95.70%), Query Frame = 0
BLAST of MC02g_new0160 vs. NCBI nr
Match: XP_022944378.1 (auxin-responsive protein SAUR24-like [Cucurbita moschata]) HSP 1 Score: 171 bits (433), Expect = 2.66e-53 Identity = 85/93 (91.40%), Postives = 89/93 (95.70%), Query Frame = 0
BLAST of MC02g_new0160 vs. NCBI nr
Match: XP_022947579.1 (auxin-responsive protein SAUR24-like [Cucurbita moschata] >XP_023533239.1 auxin-responsive protein SAUR24-like [Cucurbita pepo subsp. pepo] >KAG6605031.1 Auxin-responsive protein SAUR24, partial [Cucurbita argyrosperma subsp. sororia]) HSP 1 Score: 170 bits (431), Expect = 5.37e-53 Identity = 85/93 (91.40%), Postives = 88/93 (94.62%), Query Frame = 0
BLAST of MC02g_new0160 vs. ExPASy TrEMBL
Match: A0A6J1CYV6 (auxin-responsive protein SAUR24-like OS=Momordica charantia OX=3673 GN=LOC111015456 PE=3 SV=1) HSP 1 Score: 189 bits (479), Expect = 1.20e-60 Identity = 94/94 (100.00%), Postives = 94/94 (100.00%), Query Frame = 0
BLAST of MC02g_new0160 vs. ExPASy TrEMBL
Match: A0A5A7TUZ6 (Auxin-responsive protein SAUR24-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold123G001900 PE=3 SV=1) HSP 1 Score: 173 bits (439), Expect = 1.56e-54 Identity = 88/93 (94.62%), Postives = 89/93 (95.70%), Query Frame = 0
BLAST of MC02g_new0160 vs. ExPASy TrEMBL
Match: A0A1S3C5H8 (auxin-responsive protein SAUR24-like OS=Cucumis melo OX=3656 GN=LOC103497275 PE=3 SV=1) HSP 1 Score: 173 bits (439), Expect = 1.56e-54 Identity = 88/93 (94.62%), Postives = 89/93 (95.70%), Query Frame = 0
BLAST of MC02g_new0160 vs. ExPASy TrEMBL
Match: A0A6J1FY01 (auxin-responsive protein SAUR24-like OS=Cucurbita moschata OX=3662 GN=LOC111448842 PE=3 SV=1) HSP 1 Score: 171 bits (433), Expect = 1.29e-53 Identity = 85/93 (91.40%), Postives = 89/93 (95.70%), Query Frame = 0
BLAST of MC02g_new0160 vs. ExPASy TrEMBL
Match: A0A6J1JHE8 (auxin-responsive protein SAUR24-like OS=Cucurbita maxima OX=3661 GN=LOC111484404 PE=3 SV=1) HSP 1 Score: 170 bits (431), Expect = 2.60e-53 Identity = 85/93 (91.40%), Postives = 89/93 (95.70%), Query Frame = 0
BLAST of MC02g_new0160 vs. TAIR 10
Match: AT5G18080.1 (SAUR-like auxin-responsive protein family ) HSP 1 Score: 120.6 bits (301), Expect = 7.0e-28 Identity = 55/81 (67.90%), Postives = 69/81 (85.19%), Query Frame = 0
BLAST of MC02g_new0160 vs. TAIR 10
Match: AT5G18050.1 (SAUR-like auxin-responsive protein family ) HSP 1 Score: 117.5 bits (293), Expect = 5.9e-27 Identity = 53/81 (65.43%), Postives = 68/81 (83.95%), Query Frame = 0
BLAST of MC02g_new0160 vs. TAIR 10
Match: AT5G18020.1 (SAUR-like auxin-responsive protein family ) HSP 1 Score: 117.1 bits (292), Expect = 7.7e-27 Identity = 54/81 (66.67%), Postives = 67/81 (82.72%), Query Frame = 0
BLAST of MC02g_new0160 vs. TAIR 10
Match: AT5G18060.1 (SAUR-like auxin-responsive protein family ) HSP 1 Score: 116.3 bits (290), Expect = 1.3e-26 Identity = 53/81 (65.43%), Postives = 68/81 (83.95%), Query Frame = 0
BLAST of MC02g_new0160 vs. TAIR 10
Match: AT2G21210.1 (SAUR-like auxin-responsive protein family ) HSP 1 Score: 112.8 bits (281), Expect = 1.5e-25 Identity = 54/83 (65.06%), Postives = 67/83 (80.72%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Bitter gourd (Dali-11) v1
Date Performed: 2021-10-25
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
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