MC02g_new0142 (gene) Bitter gourd (Dali-11) v1

Overview
NameMC02g_new0142
Typegene
OrganismMomordica charantia cv. Dali-11 (Bitter gourd (Dali-11) v1)
DescriptionUnknown protein
LocationMC02: 6289034 .. 6289728 (+)
RNA-Seq ExpressionMC02g_new0142
SyntenyMC02g_new0142
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGATACGGCCGAACGCGTACAGTCTTGATCAGGAGGATCCAGAAGTACGGCTACGGCGACAGCAGCTCCTGCAAGAATCATGCTGCCGCCAGAGAATCGGCCTCAAACTCTTCCGCCGACTGCAACAACTCCACTCGAGGCCGCGCCACCAATCGCTAATTGCGCCGCCGTCGGTTGAAGCTCTCGAACTGGACTATTCTCGACTCACTGCGTTTCTTGAAGCCGATCGCTCGTTTTTCTCGCCGTGGAATTGGAGCCCAAATTACGCACCACTACAAGATCATCGTGCCGATACTTTCACCAATTTTGCAGGAGGAAACCAGCGCATGATGTTTTTGTTAGGCTCATTCTTCAGCGACGATGATCATCAGGTTATTCGCTAATTTCTTAAATCCTCGATTATGTTTCCGGAAAATTAATCCCCAATTTCGGCGTCGAATGATCTAATTTTGTATGTGAAAATTGAATAAACAATCGCATCCATTTCGAATCTGATTATGGAGTTGGAGTTCATTTTGATCCTCATTTCTTTCGAGTCATTTTCACGATTCTTGAAAGATAAACGATATAACGAACGATTTATTATTATTTTTTTAATCTACAGGAATTGAAGAACACCAGGCGCCGAGAAGGCGCGATCCAAAATCCGGATTCCAGTACTGATTTCGAGTCTCTCACTACCATTGTGCCCTAA

mRNA sequence

ATGATACGGCCGAACGCGTACAGTCTTGATCAGGAGGATCCAGAAGTACGGCTACGGCGACAGCAGCTCCTGCAAGAATCATGCTGCCGCCAGAGAATCGGCCTCAAACTCTTCCGCCGACTGCAACAACTCCACTCGAGGCCGCGCCACCAATCGCTAATTGCGCCGCCGTCGGTTGAAGCTCTCGAACTGGACTATTCTCGACTCACTGCGTTTCTTGAAGCCGATCGCTCGTTTTTCTCGCCGTGGAATTGGAGCCCAAATTACGCACCACTACAAGATCATCGTGCCGATACTTTCACCAATTTTGCAGGAGGAAACCAGCGCATGATGTTTTTGTTAGGCTCATTCTTCAGCGACGATGATCATCAGGAATTGAAGAACACCAGGCGCCGAGAAGGCGCGATCCAAAATCCGGATTCCAGTACTGATTTCGAGTCTCTCACTACCATTGTGCCCTAA

Coding sequence (CDS)

ATGATACGGCCGAACGCGTACAGTCTTGATCAGGAGGATCCAGAAGTACGGCTACGGCGACAGCAGCTCCTGCAAGAATCATGCTGCCGCCAGAGAATCGGCCTCAAACTCTTCCGCCGACTGCAACAACTCCACTCGAGGCCGCGCCACCAATCGCTAATTGCGCCGCCGTCGGTTGAAGCTCTCGAACTGGACTATTCTCGACTCACTGCGTTTCTTGAAGCCGATCGCTCGTTTTTCTCGCCGTGGAATTGGAGCCCAAATTACGCACCACTACAAGATCATCGTGCCGATACTTTCACCAATTTTGCAGGAGGAAACCAGCGCATGATGTTTTTGTTAGGCTCATTCTTCAGCGACGATGATCATCAGGAATTGAAGAACACCAGGCGCCGAGAAGGCGCGATCCAAAATCCGGATTCCAGTACTGATTTCGAGTCTCTCACTACCATTGTGCCCTAA

Protein sequence

MIRPNAYSLDQEDPEVRLRRQQLLQESCCRQRIGLKLFRRLQQLHSRPRHQSLIAPPSVEALELDYSRLTAFLEADRSFFSPWNWSPNYAPLQDHRADTFTNFAGGNQRMMFLLGSFFSDDDHQELKNTRRREGAIQNPDSSTDFESLTTIVP
Homology
BLAST of MC02g_new0142 vs. NCBI nr
Match: XP_022148435.1 (uncharacterized protein LOC111017083 [Momordica charantia])

HSP 1 Score: 274 bits (700), Expect = 2.28e-92
Identity = 133/133 (100.00%), Postives = 133/133 (100.00%), Query Frame = 0

Query: 21  QQLLQESCCRQRIGLKLFRRLQQLHSRPRHQSLIAPPSVEALELDYSRLTAFLEADRSFF 80
           QQLLQESCCRQRIGLKLFRRLQQLHSRPRHQSLIAPPSVEALELDYSRLTAFLEADRSFF
Sbjct: 6   QQLLQESCCRQRIGLKLFRRLQQLHSRPRHQSLIAPPSVEALELDYSRLTAFLEADRSFF 65

Query: 81  SPWNWSPNYAPLQDHRADTFTNFAGGNQRMMFLLGSFFSDDDHQELKNTRRREGAIQNPD 140
           SPWNWSPNYAPLQDHRADTFTNFAGGNQRMMFLLGSFFSDDDHQELKNTRRREGAIQNPD
Sbjct: 66  SPWNWSPNYAPLQDHRADTFTNFAGGNQRMMFLLGSFFSDDDHQELKNTRRREGAIQNPD 125

Query: 141 SSTDFESLTTIVP 153
           SSTDFESLTTIVP
Sbjct: 126 SSTDFESLTTIVP 138

BLAST of MC02g_new0142 vs. NCBI nr
Match: KAG6605482.1 (hypothetical protein SDJN03_02799, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 65.5 bits (158), Expect = 3.70e-10
Identity = 34/67 (50.75%), Postives = 42/67 (62.69%), Query Frame = 0

Query: 56  PPSVEALELDYSRLTAFLEADRSFFSPWNWSPNYAPLQDHRADTFTNFAGGNQRMMFLL- 115
           PP  +  E+DY+ LT+FLE DRSFFSPWNW+PN +P            A GN RM+F   
Sbjct: 71  PPPPQEFEIDYNGLTSFLEVDRSFFSPWNWNPN-SPQDSEN-------ARGNDRMVFQSP 129

Query: 116 GSFFSDD 121
            SFFS+D
Sbjct: 131 DSFFSED 129

BLAST of MC02g_new0142 vs. NCBI nr
Match: KAG8644492.1 (hypothetical protein MANES_11G134050v8 [Manihot esculenta])

HSP 1 Score: 60.5 bits (145), Expect = 1.44e-08
Identity = 30/56 (53.57%), Postives = 37/56 (66.07%), Query Frame = 0

Query: 64  LDYSRLTAFLEADRSFFSPWNWSPNYAPLQDHRADTFTNFAGGNQRMMFLLGSFFS 119
           LDYSRLT+FLE D SF SPWNW+ ++  +++          G  QRMMFL GSFFS
Sbjct: 59  LDYSRLTSFLEFDDSFLSPWNWNSDFLFVEN----------GEKQRMMFLQGSFFS 104

BLAST of MC02g_new0142 vs. NCBI nr
Match: ONI00350.1 (hypothetical protein PRUPE_6G083900 [Prunus persica])

HSP 1 Score: 55.1 bits (131), Expect = 3.94e-06
Identity = 27/62 (43.55%), Postives = 37/62 (59.68%), Query Frame = 0

Query: 64  LDYSRLTAFLEADRSFFSPWNWSPNYAPLQDHRADTFTNFAGGNQRMMFLLGSFFSDDDH 123
           +DY RLT+FLE D SF +PWNW+PN  P      D  ++     + +MF  GSFF D++ 
Sbjct: 57  IDYKRLTSFLEFDDSFLTPWNWNPN--PNASACDDNTSSVETKQECIMFQPGSFFRDEEG 116

Query: 124 QE 125
            E
Sbjct: 117 GE 116

BLAST of MC02g_new0142 vs. NCBI nr
Match: TQD84532.1 (hypothetical protein C1H46_029920 [Malus baccata])

HSP 1 Score: 54.7 bits (130), Expect = 4.95e-06
Identity = 28/73 (38.36%), Postives = 38/73 (52.05%), Query Frame = 0

Query: 64  LDYSRLTAFLEADRSFFSPWNWSPNYAPLQDHRADTFTNFAGGNQRMMFLLGSFFS---- 123
           +DY RLT+FLE D SF +PWNW+P+     D ++   T        +MF  GSFF+    
Sbjct: 60  IDYKRLTSFLEFDNSFLTPWNWNPSAPSTSDSKSSLETT---NQDYIMFQPGSFFTRGYE 119

Query: 124 -------DDDHQE 125
                  DDDH +
Sbjct: 120 GELVAVRDDDHDQ 129

BLAST of MC02g_new0142 vs. ExPASy TrEMBL
Match: A0A6J1D2W9 (uncharacterized protein LOC111017083 OS=Momordica charantia OX=3673 GN=LOC111017083 PE=4 SV=1)

HSP 1 Score: 274 bits (700), Expect = 1.10e-92
Identity = 133/133 (100.00%), Postives = 133/133 (100.00%), Query Frame = 0

Query: 21  QQLLQESCCRQRIGLKLFRRLQQLHSRPRHQSLIAPPSVEALELDYSRLTAFLEADRSFF 80
           QQLLQESCCRQRIGLKLFRRLQQLHSRPRHQSLIAPPSVEALELDYSRLTAFLEADRSFF
Sbjct: 6   QQLLQESCCRQRIGLKLFRRLQQLHSRPRHQSLIAPPSVEALELDYSRLTAFLEADRSFF 65

Query: 81  SPWNWSPNYAPLQDHRADTFTNFAGGNQRMMFLLGSFFSDDDHQELKNTRRREGAIQNPD 140
           SPWNWSPNYAPLQDHRADTFTNFAGGNQRMMFLLGSFFSDDDHQELKNTRRREGAIQNPD
Sbjct: 66  SPWNWSPNYAPLQDHRADTFTNFAGGNQRMMFLLGSFFSDDDHQELKNTRRREGAIQNPD 125

Query: 141 SSTDFESLTTIVP 153
           SSTDFESLTTIVP
Sbjct: 126 SSTDFESLTTIVP 138

BLAST of MC02g_new0142 vs. ExPASy TrEMBL
Match: A0A251NNT1 (Uncharacterized protein OS=Prunus persica OX=3760 GN=PRUPE_6G083900 PE=4 SV=1)

HSP 1 Score: 55.1 bits (131), Expect = 1.91e-06
Identity = 27/62 (43.55%), Postives = 37/62 (59.68%), Query Frame = 0

Query: 64  LDYSRLTAFLEADRSFFSPWNWSPNYAPLQDHRADTFTNFAGGNQRMMFLLGSFFSDDDH 123
           +DY RLT+FLE D SF +PWNW+PN  P      D  ++     + +MF  GSFF D++ 
Sbjct: 57  IDYKRLTSFLEFDDSFLTPWNWNPN--PNASACDDNTSSVETKQECIMFQPGSFFRDEEG 116

Query: 124 QE 125
            E
Sbjct: 117 GE 116

BLAST of MC02g_new0142 vs. ExPASy TrEMBL
Match: A0A498IQS9 (Uncharacterized protein OS=Malus domestica OX=3750 GN=DVH24_032789 PE=4 SV=1)

HSP 1 Score: 54.7 bits (130), Expect = 2.40e-06
Identity = 28/73 (38.36%), Postives = 38/73 (52.05%), Query Frame = 0

Query: 64  LDYSRLTAFLEADRSFFSPWNWSPNYAPLQDHRADTFTNFAGGNQRMMFLLGSFFS---- 123
           +DY RLT+FLE D SF +PWNW+P+     D ++   T        +MF  GSFF+    
Sbjct: 60  IDYKRLTSFLEFDNSFLTPWNWNPSAPSTSDSKSSLETT---NQDYIMFQPGSFFTRGYE 119

Query: 124 -------DDDHQE 125
                  DDDH +
Sbjct: 120 GELVAVRDDDHDQ 129

BLAST of MC02g_new0142 vs. ExPASy TrEMBL
Match: A0A540LE23 (Uncharacterized protein OS=Malus baccata OX=106549 GN=C1H46_029920 PE=4 SV=1)

HSP 1 Score: 54.7 bits (130), Expect = 2.40e-06
Identity = 28/73 (38.36%), Postives = 38/73 (52.05%), Query Frame = 0

Query: 64  LDYSRLTAFLEADRSFFSPWNWSPNYAPLQDHRADTFTNFAGGNQRMMFLLGSFFS---- 123
           +DY RLT+FLE D SF +PWNW+P+     D ++   T        +MF  GSFF+    
Sbjct: 60  IDYKRLTSFLEFDNSFLTPWNWNPSAPSTSDSKSSLETT---NQDYIMFQPGSFFTRGYE 119

Query: 124 -------DDDHQE 125
                  DDDH +
Sbjct: 120 GELVAVRDDDHDQ 129

BLAST of MC02g_new0142 vs. ExPASy TrEMBL
Match: A0A6J5XGX8 (Uncharacterized protein OS=Prunus armeniaca OX=36596 GN=CURHAP_LOCUS36029 PE=4 SV=1)

HSP 1 Score: 53.5 bits (127), Expect = 6.29e-06
Identity = 26/62 (41.94%), Postives = 37/62 (59.68%), Query Frame = 0

Query: 64  LDYSRLTAFLEADRSFFSPWNWSPNYAPLQDHRADTFTNFAGGNQRMMFLLGSFFSDDDH 123
           +DY RLT+FL+ D SF +PWNW+PN  P      D  ++     + +MF  GSFF D++ 
Sbjct: 49  IDYKRLTSFLKFDDSFLTPWNWNPN--PNASACDDNTSSVETKQECIMFQPGSFFRDEEG 108

Query: 124 QE 125
            E
Sbjct: 109 GE 108

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
XP_022148435.12.28e-92100.00uncharacterized protein LOC111017083 [Momordica charantia][more]
KAG6605482.13.70e-1050.75hypothetical protein SDJN03_02799, partial [Cucurbita argyrosperma subsp. sorori... [more]
KAG8644492.11.44e-0853.57hypothetical protein MANES_11G134050v8 [Manihot esculenta][more]
ONI00350.13.94e-0643.55hypothetical protein PRUPE_6G083900 [Prunus persica][more]
TQD84532.14.95e-0638.36hypothetical protein C1H46_029920 [Malus baccata][more]
Match NameE-valueIdentityDescription
A0A6J1D2W91.10e-92100.00uncharacterized protein LOC111017083 OS=Momordica charantia OX=3673 GN=LOC111017... [more]
A0A251NNT11.91e-0643.55Uncharacterized protein OS=Prunus persica OX=3760 GN=PRUPE_6G083900 PE=4 SV=1[more]
A0A498IQS92.40e-0638.36Uncharacterized protein OS=Malus domestica OX=3750 GN=DVH24_032789 PE=4 SV=1[more]
A0A540LE232.40e-0638.36Uncharacterized protein OS=Malus baccata OX=106549 GN=C1H46_029920 PE=4 SV=1[more]
A0A6J5XGX86.29e-0641.94Uncharacterized protein OS=Prunus armeniaca OX=36596 GN=CURHAP_LOCUS36029 PE=4 S... [more]
Match NameE-valueIdentityDescription
InterPro
Analysis Name: InterPro Annotations of Bitter gourd (Dali-11) v1
Date Performed: 2021-10-25
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 128..153
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 135..153

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
MC02g_new0142.1MC02g_new0142.1mRNA