MC02g_new0093 (gene) Bitter gourd (Dali-11) v1

Overview
NameMC02g_new0093
Typegene
OrganismMomordica charantia cv. Dali-11 (Bitter gourd (Dali-11) v1)
DescriptionUnknown protein
LocationMC02: 4031363 .. 4031759 (-)
RNA-Seq ExpressionMC02g_new0093
SyntenyMC02g_new0093
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
AAAATTCAGAATACAGAAATGAGGAATCATTAGACATTAGCCAGAACAAAAATTTCAGTGGAGAACAAATGAATGCGGCATTGTTAGCGGTAGGATCGAAGAACAGATCCACAAAAAGTACAGATGATGGCTCTCCAGGATTTCCAGTAAAAGGGAACGTGACAGAATCTGGTGGCCGTTTTCATATCCGCCACTCTGGCTCCTCCTCCGCAACGGGAGCAAATGCCCGGCGCCGGCCTACTCCGCCGCACCCTCCGCTTCTCATCCACCAGAAAGCAGAAGCAAACCATGGGGGCTTCCGATCACCTAAGGCAGCTGCAATGGAATCAAGTTTTAAGCGAAATGGGAACGAGTGAGTGACACAACCCAAGCAAGTGAGCATATTTATAGGGGCAGC

mRNA sequence

ATGAATGCGGCATTGTTAGCGGTAGGATCGAAGAACAGATCCACAAAAAGTACAGATGATGGCTCTCCAGGATTTCCAGTAAAAGGGAACGTGACAGAATCTGGTGGCCGTTTTCATATCCGCCACTCTGGCTCCTCCTCCGCAACGGGAGCAAATGCCCGGCGCCGGCCTACTCCGCCGCACCCTCCGCTTCTCATCCACCAGAAAGCAGAAGCAAACCATGGGGGCTTCCGATCACCTAAGGCAGCTGCAATGGAATCAAGTTTTAAGCGAAATGGGAACGAGTGA

Coding sequence (CDS)

ATGAATGCGGCATTGTTAGCGGTAGGATCGAAGAACAGATCCACAAAAAGTACAGATGATGGCTCTCCAGGATTTCCAGTAAAAGGGAACGTGACAGAATCTGGTGGCCGTTTTCATATCCGCCACTCTGGCTCCTCCTCCGCAACGGGAGCAAATGCCCGGCGCCGGCCTACTCCGCCGCACCCTCCGCTTCTCATCCACCAGAAAGCAGAAGCAAACCATGGGGGCTTCCGATCACCTAAGGCAGCTGCAATGGAATCAAGTTTTAAGCGAAATGGGAACGAGTGA

Protein sequence

MNAALLAVGSKNRSTKSTDDGSPGFPVKGNVTESGGRFHIRHSGSSSATGANARRRPTPPHPPLLIHQKAEANHGGFRSPKAAAMESSFKRNGNE
Homology
BLAST of MC02g_new0093 vs. NCBI nr
Match: TKY48832.1 (Notchless protein-like [Spatholobus suberectus])

HSP 1 Score: 80.1 bits (196), Expect = 2.95e-15
Identity = 35/65 (53.85%), Postives = 50/65 (76.92%), Query Frame = 0

Query: 10 SKNRSTKSTDDGSPGFPVKGNVTESGGRFHIRHSGSSSATGANARRRPTPPHPPLLIHQK 69
          +KN ST+S ++GSP FP++G++ + GGR H+  +GS++A GAN RRR  PPH P L+HQK
Sbjct: 6  AKNGSTESANNGSPRFPIEGDIAKPGGRLHVGDAGSAAAAGANPRRRLAPPHLPPLVHQK 65

Query: 70 AEANH 74
           EA+H
Sbjct: 66 TEAHH 70

BLAST of MC02g_new0093 vs. NCBI nr
Match: QHO56407.1 (uncharacterized protein DS421_3g73450 [Arachis hypogaea])

HSP 1 Score: 73.2 bits (178), Expect = 1.59e-14
Identity = 36/82 (43.90%), Postives = 51/82 (62.20%), Query Frame = 0

Query: 8  VGSKNRSTKSTDDGSPGFPVKGNVTESGGRFHIRHSGSSSATGANARRRPTPPHPPLLIH 67
          VG+KN + KS D+GSP   VKGN  + GG FH+ H+ S++A  A +RRR  PP+ P L+H
Sbjct: 2  VGAKNSTAKSADNGSPRLAVKGNTAKPGGGFHVGHASSTAAPAAYSRRRFAPPYFPRLVH 61

Query: 68 QKAEANHGGFRSPKAAAMESSF 89
          Q+ EA H       +  ++ SF
Sbjct: 62 QETEAYHDALLCLTSFLIQLSF 83

BLAST of MC02g_new0093 vs. NCBI nr
Match: GFZ07498.1 (hypothetical protein Acr_19g0004350 [Actinidia rufa])

HSP 1 Score: 70.1 bits (170), Expect = 2.73e-13
Identity = 34/64 (53.12%), Postives = 45/64 (70.31%), Query Frame = 0

Query: 11 KNRSTKSTDDGSPGFPVKGNVTESGGRFHIRHSGSSSATGANARRRPTPPHPPLLIHQKA 70
          +N STK   +  P  P+K +VT+ GG  H+RH+G+++A  A AR R  PPH PLLIHQ+A
Sbjct: 17 ENSSTKRAHNSFPISPIKRDVTKPGGGSHVRHAGAAAAPRAQARHRLGPPHRPLLIHQEA 76

Query: 71 EANH 74
          EANH
Sbjct: 77 EANH 80

BLAST of MC02g_new0093 vs. NCBI nr
Match: KAA0047885.1 (hypothetical protein E6C27_scaffold133G001590 [Cucumis melo var. makuwa] >TYK02164.1 hypothetical protein E5676_scaffold388G00560 [Cucumis melo var. makuwa])

HSP 1 Score: 68.2 bits (165), Expect = 7.68e-13
Identity = 31/45 (68.89%), Postives = 38/45 (84.44%), Query Frame = 0

Query: 31 VTESGGRFHIRHSGSSSATGANARRRPTPPHPPLLIHQKAEANHG 75
          +TES   FHI ++GSS+A+GAN+RRRPTPPH PLLIH KA+ NHG
Sbjct: 1  MTESRSGFHIGNAGSSAASGANSRRRPTPPHLPLLIHHKAKENHG 45

BLAST of MC02g_new0093 vs. NCBI nr
Match: KAF7823035.1 (uncharacterized protein G2W53_021179 [Senna tora])

HSP 1 Score: 65.5 bits (158), Expect = 1.17e-11
Identity = 31/69 (44.93%), Postives = 48/69 (69.57%), Query Frame = 0

Query: 6  LAVGSKNRSTKSTDDGSPGFPVKGNVTESGGRFHIRHSGSSSATGANARRRPTPPHPPLL 65
          L V +KN ST+S D+ SP FP++ ++T+S G FHI ++GS++A  A + RR  P H P L
Sbjct: 4  LTVRTKNGSTESADNSSPRFPIERDMTKSSGGFHISNAGSAAAPRAKSGRRLAPLHLPCL 63

Query: 66 IHQKAEANH 74
          +H++ E +H
Sbjct: 64 VHKETETHH 72

BLAST of MC02g_new0093 vs. ExPASy TrEMBL
Match: A0A7J0G9W4 (Uncharacterized protein OS=Actinidia rufa OX=165716 GN=Acr_19g0004350 PE=4 SV=1)

HSP 1 Score: 70.1 bits (170), Expect = 1.32e-13
Identity = 34/64 (53.12%), Postives = 45/64 (70.31%), Query Frame = 0

Query: 11 KNRSTKSTDDGSPGFPVKGNVTESGGRFHIRHSGSSSATGANARRRPTPPHPPLLIHQKA 70
          +N STK   +  P  P+K +VT+ GG  H+RH+G+++A  A AR R  PPH PLLIHQ+A
Sbjct: 17 ENSSTKRAHNSFPISPIKRDVTKPGGGSHVRHAGAAAAPRAQARHRLGPPHRPLLIHQEA 76

Query: 71 EANH 74
          EANH
Sbjct: 77 EANH 80

BLAST of MC02g_new0093 vs. ExPASy TrEMBL
Match: A0A5D3BSN7 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold388G00560 PE=4 SV=1)

HSP 1 Score: 68.2 bits (165), Expect = 3.72e-13
Identity = 31/45 (68.89%), Postives = 38/45 (84.44%), Query Frame = 0

Query: 31 VTESGGRFHIRHSGSSSATGANARRRPTPPHPPLLIHQKAEANHG 75
          +TES   FHI ++GSS+A+GAN+RRRPTPPH PLLIH KA+ NHG
Sbjct: 1  MTESRSGFHIGNAGSSAASGANSRRRPTPPHLPLLIHHKAKENHG 45

BLAST of MC02g_new0093 vs. ExPASy TrEMBL
Match: A0A6A4LFF8 (Uncharacterized protein (Fragment) OS=Rhododendron williamsianum OX=262921 GN=C3L33_11978 PE=4 SV=1)

HSP 1 Score: 63.2 bits (152), Expect = 4.61e-10
Identity = 31/59 (52.54%), Postives = 38/59 (64.41%), Query Frame = 0

Query: 21  GSPGFPVKGNVTESGGRFHIRHSGSSSATGANARRRPTPPHPPLLIHQKAEANHGGFRS 79
           G  G  V+G+V E GG  H+  +G ++A GA   RR TPPH PLL+HQK EANH   RS
Sbjct: 76  GRHGLSVEGHVAEPGGGLHVGDAGPAAAPGATPGRRLTPPHFPLLVHQKTEANHDRRRS 134

BLAST of MC02g_new0093 vs. ExPASy TrEMBL
Match: A0A0A0KAZ7 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G124130 PE=4 SV=1)

HSP 1 Score: 60.1 bits (144), Expect = 7.66e-10
Identity = 28/45 (62.22%), Postives = 35/45 (77.78%), Query Frame = 0

Query: 31 VTESGGRFHIRHSGSSSATGANARRRPTPPHPPLLIHQKAEANHG 75
          +TES   FHI ++GSS+A+GAN+R RPT  H PLLIH KA+ NHG
Sbjct: 1  MTESNSGFHIGNAGSSTASGANSRGRPTSAHLPLLIHHKAKENHG 45

BLAST of MC02g_new0093 vs. ExPASy TrEMBL
Match: A0A022QXP6 (Uncharacterized protein OS=Erythranthe guttata OX=4155 GN=MIMGU_mgv1a016802mg PE=4 SV=1)

HSP 1 Score: 58.5 bits (140), Expect = 6.46e-09
Identity = 32/64 (50.00%), Postives = 36/64 (56.25%), Query Frame = 0

Query: 11 KNRSTKSTDDGSPGFPVKGNVTESGGRFHIRHSGSSSATGANARRRPTPPHPPLLIHQKA 70
          KN  TK+T D  P   VK +VT+    FHIRH G+  A  A  R R   PH  LLIHQK 
Sbjct: 10 KNTPTKTTYDSFPRLAVKWDVTKPRQSFHIRHRGAVPAPRARPRHRLASPHHALLIHQKT 69

Query: 71 EANH 74
          E NH
Sbjct: 70 ETNH 73

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
TKY48832.12.95e-1553.85Notchless protein-like [Spatholobus suberectus][more]
QHO56407.11.59e-1443.90uncharacterized protein DS421_3g73450 [Arachis hypogaea][more]
GFZ07498.12.73e-1353.13hypothetical protein Acr_19g0004350 [Actinidia rufa][more]
KAA0047885.17.68e-1368.89hypothetical protein E6C27_scaffold133G001590 [Cucumis melo var. makuwa] >TYK021... [more]
KAF7823035.11.17e-1144.93uncharacterized protein G2W53_021179 [Senna tora][more]
Match NameE-valueIdentityDescription
A0A7J0G9W41.32e-1353.13Uncharacterized protein OS=Actinidia rufa OX=165716 GN=Acr_19g0004350 PE=4 SV=1[more]
A0A5D3BSN73.72e-1368.89Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold... [more]
A0A6A4LFF84.61e-1052.54Uncharacterized protein (Fragment) OS=Rhododendron williamsianum OX=262921 GN=C3... [more]
A0A0A0KAZ77.66e-1062.22Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G124130 PE=4 SV=1[more]
A0A022QXP66.46e-0950.00Uncharacterized protein OS=Erythranthe guttata OX=4155 GN=MIMGU_mgv1a016802mg PE... [more]
Match NameE-valueIdentityDescription
InterPro
Analysis Name: InterPro Annotations of Bitter gourd (Dali-11) v1
Date Performed: 2021-10-25
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 39..53
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 7..21
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1..95

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
MC02g_new0093.1MC02g_new0093.1mRNA