MC02g_new0079 (gene) Bitter gourd (Dali-11) v1

Overview
NameMC02g_new0079
Typegene
OrganismMomordica charantia cv. Dali-11 (Bitter gourd (Dali-11) v1)
Descriptionacanthoscurrin-2-like isoform X1
LocationMC02: 3537374 .. 3538347 (-)
RNA-Seq ExpressionMC02g_new0079
SyntenyMC02g_new0079
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGAAGTCCAAAGGTTTTCTGTTTCTGTGTCTTCTACTTCTCTCTGCTCTCGTTATCTCGTGGGCTATAGAATCCCACACAACTAAGGATGAAAAAGAAGGTATTTACTGTTTATTTTGTCTTTCATTTCTTTGTTTCCTTTGTTTTTTTTTTATATATCAATACTTTAAAGCTCTCACCTTTTTTAAAAAAGCACAAAATTTATGTTTTAATTTCTATCAGTACTTTAACCTTCTCTCATTTATTTGTAATCTCATTTGCAGTACTAGTCACTAGTTTAACTTGTGAGCTCGAAATTTGATTATCATATTAAAGAGCATGATCGATCACTAAATTCATTAAAAGATTTAAATTGCGGATGTTTTAAGAGGAGGATGGGTTACAGTAAATTCACGTAATAATAATAGTTCATGTTGCATGGACAGAAATAGATAAAAGAGTACGTATCTAATAATTATCACTTTTCCGGTGTCATTTGATATCAATTAATCAATCCATTATTGGATTCACTTTCAGTGAATTATGTGGGCCACGAGGCAGAAGACAAACATGGAGGCGGTGGCGGTTATGGCGGAGGATCTGGCGGAGGGGGTCACGGCGGCGGGTCCGGCTCAGGCGGTCACGGAGGTGAGNAGGTGGTCATGGAGGCAAAGGAGGCGGTGGCGGAGGTTATGGCGGAGGCGGGAAAGGAGGCGGAGGGTCCGGTGGAAGCGGCGGCGGGAAAGGAGGCGGCGGCTCTGGTGGAGGCAGCGGCGGTAAAGGAGGCGGCGGCTCTGGTGGAGGCGGCAAAGGAGGCGGCAAAGGAGGCGGTGGTGGTTACGGCGGCGGCGGCGGCAAAGGAGGCGGCGGGTCTGGCGGTGGAGGAAGTGGATCTGGTGGAGGCGGTGGATATGGCGGAGGAAGTGGCGGCGGATCTGAGGGAGAGGGAGGAGGAGGAGGCTACTAAACCAGTCTTCAAGAGGAGGAGAAACTGA

mRNA sequence

ATGAAGTCCAAAGGTTTTCTGTTTCTGTGTCTTCTACTTCTCTCTGCTCTCGTTATCTCGTGGGCTATAGAATCCCACACAACTAAGGATGAAAAAGAAGTGAATTATGTGGGCCACGAGGCAGAAGACAAACATGGAGGCGGTGGCGGTTATGGCGGAGGATCTGGCGGAGGGGGTCACGGCGGCGGGTCCGGCTCAGGCGGTCACGGAGGTGAGNAGGTGGTCATGGAGGCAAAGGAGGCGGTGGCGGAGGTTATGGCGGAGGCGGGAAAGGAGGCGGAGGGTCCGGTGGAAGCGGCGGCGGGAAAGGAGGCGGCGGCTCTGGTGGAGGCAGCGGCGGTAAAGGAGGCGGCGGCTCTGGTGGAGGCGGCAAAGGAGGCGGCAAAGGAGGCGGTGGTGGTTACGGCGGCGGCGGCGGCAAAGGAGGCGGCGGGTCTGGCGGTGGAGGAAGTGGATCTGGTGGAGGCGGTGGATATGGCGGAGGAAGTGGCGGCGGATCTGAGGGAGAGGGAGGAGGAGGAGGCTACTAAACCAGTCTTCAAGAGGAGGAGAAACTGA

Coding sequence (CDS)

ATGAAGTCCAAAGGTTTTCTGTTTCTGTGTCTTCTACTTCTCTCTGCTCTCGTTATCTCGTGGGCTATAGAATCCCACACAACTAAGGATGAAAAAGAAGTGAATTATGTGGGCCACGAGGCAGAAGACAAACATGGAGGCGGTGGCGGTTATGGCGGAGGATCTGGCGGAGGGGGTCACGGCGGCGGGTCCGGCTCAGGCGGTCACGGAGGTGAGNAGGTGGTCATGGAGGCAAAGGAGGCGGTGGCGGAGGTTATGGCGGAGGCGGGAAAGGAGGCGGAGGGTCCGGTGGAAGCGGCGGCGGGAAAGGAGGCGGCGGCTCTGGTGGAGGCAGCGGCGGTAAAGGAGGCGGCGGCTCTGGTGGAGGCGGCAAAGGAGGCGGCAAAGGAGGCGGTGGTGGTTACGGCGGCGGCGGCGGCAAAGGAGGCGGCGGGTCTGGCGGTGGAGGAAGTGGATCTGGTGGAGGCGGTGGATATGGCGGAGGAAGTGGCGGCGGATCTGAGGGAGAGGGAGGAGGAGGAGGCTACTAAACCAGTCTTCAAGAGGAGGAGAAACTGA

Protein sequence

MKSKGFLFLCLLLLSALVISWAIESHTTKDEKEVNYVGHEAEDKHGGGGGYGGGSGGGGHGGGSGSGGHGGEXVVMEAKEAVAEVMAEAGKEAEGPVEAAAGKEAAALVEAAAVKEAAALVEAAKEAAKEAVVVTAAAAAKEAAGLAVEEVDLVEAVDMAEEVAADLREREEEEATKPVFKRRRN
Homology
[Close]
BLAST of MC02g_new0079 vs. NCBI nr
Match: XP_022140564.1 (acanthoscurrin-2-like isoform X1 [Momordica charantia])

HSP 1 Score: 127 bits (320), Expect = 3.17e-33
Identity = 72/72 (100.00%), Postives = 72/72 (100.00%), Query Frame = 0 

Query: 1  MKSKGFLFLCLLLLSALVISWAIESHTTKDEKEVNYVGHEAEDKHGGGGGYGGGSGGGGH 60
          MKSKGFLFLCLLLLSALVISWAIESHTTKDEKEVNYVGHEAEDKHGGGGGYGGGSGGGGH
Sbjct: 1  MKSKGFLFLCLLLLSALVISWAIESHTTKDEKEVNYVGHEAEDKHGGGGGYGGGSGGGGH 60

Query: 61 GGGSGSGGHGGE 72
          GGGSGSGGHGGE
Sbjct: 61 GGGSGSGGHGGE 72

[Close]
BLAST of MC02g_new0079 vs. NCBI nr
Match: XP_022140565.1 (acanthoscurrin-2-like isoform X2 [Momordica charantia])

HSP 1 Score: 125 bits (315), Expect = 1.15e-32
Identity = 71/71 (100.00%), Postives = 71/71 (100.00%), Query Frame = 0 

Query: 1  MKSKGFLFLCLLLLSALVISWAIESHTTKDEKEVNYVGHEAEDKHGGGGGYGGGSGGGGH 60
          MKSKGFLFLCLLLLSALVISWAIESHTTKDEKEVNYVGHEAEDKHGGGGGYGGGSGGGGH
Sbjct: 1  MKSKGFLFLCLLLLSALVISWAIESHTTKDEKEVNYVGHEAEDKHGGGGGYGGGSGGGGH 60

Query: 61 GGGSGSGGHGG 71
          GGGSGSGGHGG
Sbjct: 61 GGGSGSGGHGG 71

[Close]
BLAST of MC02g_new0079 vs. NCBI nr
Match: XP_023534314.1 (acanthoscurrin-2-like isoform X2 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 74.7 bits (182), Expect = 1.50e-12
Identity = 52/74 (70.27%), Postives = 60/74 (81.08%), Query Frame = 0 

Query: 1  MKSKGFLFLCLLLLSALVISWAIESHTTKDEKEVNYVGHEAEDKHG-GGGGYGGG-SGGG 60
          MKSKGFL +CLLL+SALV+SWAIE+HT++DE++ N      E KHG GGGGYGGG SGGG
Sbjct: 1  MKSKGFLLVCLLLVSALVVSWAIEAHTSEDEQQENVAQEVEEAKHGHGGGGYGGGGSGGG 60

Query: 61 GHGG-GSGSGGHGG 71
          G GG GSG GGHGG
Sbjct: 61 GQGGSGSGGGGHGG 74

[Close]
BLAST of MC02g_new0079 vs. NCBI nr
Match: XP_022971102.1 (acanthoscurrin-2-like isoform X2 [Cucurbita maxima])

HSP 1 Score: 72.8 bits (177), Expect = 5.17e-12
Identity = 50/74 (67.57%), Postives = 58/74 (78.38%), Query Frame = 0 

Query: 1  MKSKGFLFLCLLLLSALVISWAIESHTTKDEKEVNYVGHEAEDKHG-GGGGYGGGSGGGG 60
          MKSKGFL +CLLL+SALV+SWAIE+HT++DE++ N      E KHG GGGGYGGG  GGG
Sbjct: 1  MKSKGFLLVCLLLVSALVVSWAIEAHTSEDEQQENVAQEVEEAKHGHGGGGYGGGGSGGG 60

Query: 61 HGGGSGSGG--HGG 71
            GGSGSGG  HGG
Sbjct: 61 GQGGSGSGGGSHGG 74

[Close]
BLAST of MC02g_new0079 vs. NCBI nr
Match: XP_023534315.1 (acanthoscurrin-2-like isoform X3 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 72.4 bits (176), Expect = 8.89e-12
Identity = 54/76 (71.05%), Postives = 64/76 (84.21%), Query Frame = 0 

Query: 1  MKSKGFLFLCLLLLSALVISWAIESHTTKDEKEVNY-VGHEAED-KHG-GGGGYGGG-SG 60
          MKSKGFL +CLLL+SALV+SWAIE+HT++DE++V+  V  E E+ KHG GGGGYGGG SG
Sbjct: 1  MKSKGFLLVCLLLVSALVVSWAIEAHTSEDEQQVSENVAQEVEEAKHGHGGGGYGGGGSG 60

Query: 61 GGGHGG-GSGSGGHGG 71
          GGG GG GSG GGHGG
Sbjct: 61 GGGQGGSGSGGGGHGG 76

[Close]
BLAST of MC02g_new0079 vs. ExPASy TrEMBL
Match: A0A6J1CG15 (acanthoscurrin-2-like isoform X1 OS=Momordica charantia OX=3673 GN=LOC111011190 PE=4 SV=1)

HSP 1 Score: 127 bits (320), Expect = 1.54e-33
Identity = 72/72 (100.00%), Postives = 72/72 (100.00%), Query Frame = 0 

Query: 1  MKSKGFLFLCLLLLSALVISWAIESHTTKDEKEVNYVGHEAEDKHGGGGGYGGGSGGGGH 60
          MKSKGFLFLCLLLLSALVISWAIESHTTKDEKEVNYVGHEAEDKHGGGGGYGGGSGGGGH
Sbjct: 1  MKSKGFLFLCLLLLSALVISWAIESHTTKDEKEVNYVGHEAEDKHGGGGGYGGGSGGGGH 60

Query: 61 GGGSGSGGHGGE 72
          GGGSGSGGHGGE
Sbjct: 61 GGGSGSGGHGGE 72

[Close]
BLAST of MC02g_new0079 vs. ExPASy TrEMBL
Match: A0A6J1CFD9 (acanthoscurrin-2-like isoform X2 OS=Momordica charantia OX=3673 GN=LOC111011190 PE=4 SV=1)

HSP 1 Score: 125 bits (315), Expect = 5.59e-33
Identity = 71/71 (100.00%), Postives = 71/71 (100.00%), Query Frame = 0 

Query: 1  MKSKGFLFLCLLLLSALVISWAIESHTTKDEKEVNYVGHEAEDKHGGGGGYGGGSGGGGH 60
          MKSKGFLFLCLLLLSALVISWAIESHTTKDEKEVNYVGHEAEDKHGGGGGYGGGSGGGGH
Sbjct: 1  MKSKGFLFLCLLLLSALVISWAIESHTTKDEKEVNYVGHEAEDKHGGGGGYGGGSGGGGH 60

Query: 61 GGGSGSGGHGG 71
          GGGSGSGGHGG
Sbjct: 61 GGGSGSGGHGG 71

[Close]
BLAST of MC02g_new0079 vs. ExPASy TrEMBL
Match: A0A6J1I123 (acanthoscurrin-2-like isoform X2 OS=Cucurbita maxima OX=3661 GN=LOC111469872 PE=4 SV=1)

HSP 1 Score: 72.8 bits (177), Expect = 2.50e-12
Identity = 50/74 (67.57%), Postives = 58/74 (78.38%), Query Frame = 0 

Query: 1  MKSKGFLFLCLLLLSALVISWAIESHTTKDEKEVNYVGHEAEDKHG-GGGGYGGGSGGGG 60
          MKSKGFL +CLLL+SALV+SWAIE+HT++DE++ N      E KHG GGGGYGGG  GGG
Sbjct: 1  MKSKGFLLVCLLLVSALVVSWAIEAHTSEDEQQENVAQEVEEAKHGHGGGGYGGGGSGGG 60

Query: 61 HGGGSGSGG--HGG 71
            GGSGSGG  HGG
Sbjct: 61 GQGGSGSGGGSHGG 74

[Close]
BLAST of MC02g_new0079 vs. ExPASy TrEMBL
Match: A0A6J1I5V7 (acanthoscurrin-2-like isoform X3 OS=Cucurbita maxima OX=3661 GN=LOC111469872 PE=4 SV=1)

HSP 1 Score: 70.5 bits (171), Expect = 1.68e-11
Identity = 52/76 (68.42%), Postives = 62/76 (81.58%), Query Frame = 0 

Query: 1  MKSKGFLFLCLLLLSALVISWAIESHTTKDEKEVNY-VGHEAED-KHG-GGGGYGGGSGG 60
          MKSKGFL +CLLL+SALV+SWAIE+HT++DE++V+  V  E E+ KHG GGGGYGGG  G
Sbjct: 1  MKSKGFLLVCLLLVSALVVSWAIEAHTSEDEQQVSENVAQEVEEAKHGHGGGGYGGGGSG 60

Query: 61 GGHGGGSGSGG--HGG 71
          GG  GGSGSGG  HGG
Sbjct: 61 GGGQGGSGSGGGSHGG 76

[Close]
BLAST of MC02g_new0079 vs. ExPASy TrEMBL
Match: A0A6J1I2D6 (acanthoscurrin-2-like isoform X1 OS=Cucurbita maxima OX=3661 GN=LOC111469872 PE=4 SV=1)

HSP 1 Score: 70.5 bits (171), Expect = 1.89e-11
Identity = 52/76 (68.42%), Postives = 62/76 (81.58%), Query Frame = 0 

Query: 1  MKSKGFLFLCLLLLSALVISWAIESHTTKDEKEVNY-VGHEAED-KHG-GGGGYGGGSGG 60
          MKSKGFL +CLLL+SALV+SWAIE+HT++DE++V+  V  E E+ KHG GGGGYGGG  G
Sbjct: 1  MKSKGFLLVCLLLVSALVVSWAIEAHTSEDEQQVSENVAQEVEEAKHGHGGGGYGGGGSG 60

Query: 61 GGHGGGSGSGG--HGG 71
          GG  GGSGSGG  HGG
Sbjct: 61 GGGQGGSGSGGGSHGG 76

The following BLAST results are available for this feature:
BLAST of MC02g_new0079 vs.
Match NameE-valueIdentityDescription
BLAST of MC02g_new0079 vs. NCBI nr
Match NameE-valueIdentityDescription
XP_022140564.13.17e-33100.00acanthoscurrin-2-like isoform X1 [Momordica charantia][more]
XP_022140565.11.15e-32100.00acanthoscurrin-2-like isoform X2 [Momordica charantia][more]
XP_023534314.11.50e-1270.27acanthoscurrin-2-like isoform X2 [Cucurbita pepo subsp. pepo][more]
XP_022971102.15.17e-1267.57acanthoscurrin-2-like isoform X2 [Cucurbita maxima][more]
XP_023534315.18.89e-1271.05acanthoscurrin-2-like isoform X3 [Cucurbita pepo subsp. pepo][more]
BLAST of MC02g_new0079 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
A0A6J1CG151.54e-33100.00acanthoscurrin-2-like isoform X1 OS=Momordica charantia OX=3673 GN=LOC111011190 ... [more]
A0A6J1CFD95.59e-33100.00acanthoscurrin-2-like isoform X2 OS=Momordica charantia OX=3673 GN=LOC111011190 ... [more]
A0A6J1I1232.50e-1267.57acanthoscurrin-2-like isoform X2 OS=Cucurbita maxima OX=3661 GN=LOC111469872 PE=... [more]
A0A6J1I5V71.68e-1168.42acanthoscurrin-2-like isoform X3 OS=Cucurbita maxima OX=3661 GN=LOC111469872 PE=... [more]
A0A6J1I2D61.89e-1168.42acanthoscurrin-2-like isoform X1 OS=Cucurbita maxima OX=3661 GN=LOC111469872 PE=... [more]
BLAST of MC02g_new0079 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
InterPro
Analysis Name: InterPro Annotations of Bitter gourd (Dali-11) v1
Date Performed: 2021-10-25
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 40..71

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
MC02g_new0079.1MC02g_new0079.1mRNA