MC02g_new0053 (gene) Bitter gourd (Dali-11) v1

Overview


Name	MC02g_new0053
Type	gene
Organism	Momordica charantia cv. Dali-11 (Bitter gourd (Dali-11) v1)
Description	Ribosomal protein
Location	MC02: 1889083 .. 1891569 (+)
RNA-Seq Expression	MC02g_new0053
Synteny	MC02g_new0053

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

AAAAGAGCGCATCAAGGCTCCAGCTTAAGGCCCATTGGACAATATATTGGGCCGATAGCTAACGGGCCGAATCTCAAAAGCTTCGGCCCATAGCTCTGTGCGTCCAAATTACAGACCACACATATCCTAGGTTTATCACTTGCCCCTCCCCTTTTGGATCGCCTCTCTTCGGTCTTCCATTATATATCGATAATCACTGCCGTCGGAAACCCTAGCTTCGCTTCTTCTCACCAGGTACACCACCACGCTCTTTCAAACTGAGATTTGCCTTTTTTGTATCGTGTTGTTTGTTCTTCCTTAATCTGATATTCTGTTCTTGTTTCTCTTGTTTTTCTTTGACTGGTGCATTTGATTTGGCACAACTAGCTCGTTCGTTTGCAACTAATTTTGATTCGGTTTGTTCTTGTTGTGTTCTTCTCAGCAGTCTGTAGCTTCTCCATAGGAAAAACGAGGCTCCGAAAATGAGGTATGTTGGACTGTTTTCCCATGTATTTTTATTTAATTTTTAGAGTCTACTTGTAGAACACGAATTGGATTATATGCCGGGTTCATAAATTTTTGTTCGTTTTATTTAATCGAGGTAGATTCGGAAATATGAAGTTCCAACATCGGATTTTACTTGGGGCCGTAGTTGTTTGAGTTCATGTGACTACTGACACTGGAGTTATAATGCATTTTTGTGCGTTTATACTGTATTAAGATATCGTTTATTGGAACTTCTGATTCCTGGTAGTGTTCGCCTTATGGGGTTTCTCGGCATTTAATGATTGTAGTTTCGTTGGTTGATATCTGCAGTAAACTTCAGAGTGATGCATTGAGAGAAGCCATTTCAGCTATCTTTGTTGATAGCAATGAAAAGAAGCGTAAGTTTACTGAGACCATTGAACTTCAGATTGGACTAAAGAACTATGATCCACAGAAGGACAAGCGTTTCAGTGGGTCAGTGAAGTTGCCCCACATTCCTCGCCCTAAGATGAAGATATGCATGCTTGGAGATGCTTTGCACGTTGAGGAGGTAAATTTTATATGGTCATAACTTCTTCACTTATCATGTCCAGTAGGCAGTAACTATTTTCCATTTTTTCCTAGTATATCTTGGGTTGCATAGTGTGGCGAAAAGCTTGGCAAACTTTATTCTATGATTTTGTTGCATGTGGCTTGCTGTAGTTTGTGTTGCAGTCTACTCGCAATACTGGGTTTAAATATATACTTGAAAATTTTAAATAGTAATAATGTCTATACGACCATATCATGTTGGTACTCTTTTCTATTTATGTTTAATAGGCATGATGCCGAATCCTCAATGCGTACTGTCAGTGACATTGTACTTAATTTTTTTTTTGAAAATAATGGACTTCTTGGGGATTTCACACATGGAAAATTGAAATTATAGACCGTTGCTCTTCAGCTCTAGCCTTCTACTTAATATTTGTGGGTGCTCTCTTATTATAGGCAGAGAAGATTGGTTTGGATTATATGGATGTGGAAGGCCTAAAGAAGCTAAACAAAAACAAGAAGTTGGTGAAGAAACTTGCCAAGAAGTATCATGCCTTCTTAGCTTCTGAAGCTGTTATCAAGCAAATTCCCCGTCTTCTTGGCCCTGGGCTCAACAAGGCAGGCAAGTGTGCTTCTGACTACTAGACATAGTGAATTTAACCTTGATCTTTTGTTGTGGTGATGCAAGCAAATGATATTTGAAACTTGGCACTTTATATTCCACTTTTTTTTTAGGCTCAGCATGGTCTGCGTGCTTGTATATTTAAAAGTCCAAACTTTTCTTTTGATGAATCTGCTTTGTTGTGTATAATCACTAGAGAGTTTTGTATTTACATTTCCTACCAACATTGACATCTACATTGTCATTACAGGAAAGTTTCCCACCCTTGTTACTCACCAAGAATCCCTTGAGTCTAAAGTTAATGAGACAAAGGCAATGGTTAAGTTCCAATTGAAGAAAGTTCTTTGCATGGGCGTGGCTGTGGGTAATGTTGCCATGGAGGAGAAGCAAGTCTTTCAAAATGTTCAAATGAGCGTCAATTTCCTTGTTTCATTATTGAAAAAGAACTGGCAAAACGTAAGTCGTTGCCCTCACTCTTCCACCGCATCGTTTAATTATCTGTTTTTGACTTATACACTGAGCACTCTTGAGCCTCGCCTCCCTTATTTCACGATGATAATACAATATCATCATTCTAGTTTGATTTTGTGAACATATCAACATGATTTAGAGCTCTCTACACACGAATTCCTGTCCTTTTGTCTAACAATGTTTTGTTCATCAGGTGAGGTGCTTGTACCTGAAGAGTACTATGGGGAAGGCATATCGGGTCTTCTGAAGAATTTTCAAAAACTTAGATAGTACTGTTTTCTCTTTGATTGAAGAACCAGGTTGAGATTATATTTATGATTGAAAATTTTTTTCCTGTTTGTTTTTTGTTTAGCACAGTAAACCATTAGCTGCAAAATCGATAACACTTGTGTTGGGAG

mRNA sequence

ATGAGTAAACTTCAGAGTGATGCATTGAGAGAAGCCATTTCAGCTATCTTTGTTGATAGCAATGAAAAGAAGCGTAAGTTTACTGAGACCATTGAACTTCAGATTGGACTAAAGAACTATGATCCACAGAAGGACAAGCGTTTCAGTGGGTCAGTGAAGTTGCCCCACATTCCTCGCCCTAAGATGAAGATATGCATGCTTGGAGATGCTTTGCACGTTGAGGAGGCAGAGAAGATTGGTTTGGATTATATGGATGTGGAAGGCCTAAAGAAGCTAAACAAAAACAAGAAGTTGGTGAAGAAACTTGCCAAGAAGTATCATGCCTTCTTAGCTTCTGAAGCTGTTATCAAGCAAATTCCCCGTCTTCTTGGCCCTGGGCTCAACAAGGCAGGAAAGTTTCCCACCCTTGTTACTCACCAAGAATCCCTTGAGTCTAAAGTTAATGAGACAAAGGCAATGGTTAAGTTCCAATTGAAGAAAGTTCTTTGCATGGGCGTGGCTGTGGGTAATGTTGCCATGGAGGAGAAGCAAGTCTTTCAAAATGTTCAAATGAGCGTCAATTTCCTTGTTTCATTATTGAAAAAGAACTGGCAAAACGTGAGGTGCTTGTACCTGAAGAGTACTATGGGGAAGGCATATCGGGTCTTCTGA

Coding sequence (CDS)

ATGAGTAAACTTCAGAGTGATGCATTGAGAGAAGCCATTTCAGCTATCTTTGTTGATAGCAATGAAAAGAAGCGTAAGTTTACTGAGACCATTGAACTTCAGATTGGACTAAAGAACTATGATCCACAGAAGGACAAGCGTTTCAGTGGGTCAGTGAAGTTGCCCCACATTCCTCGCCCTAAGATGAAGATATGCATGCTTGGAGATGCTTTGCACGTTGAGGAGGCAGAGAAGATTGGTTTGGATTATATGGATGTGGAAGGCCTAAAGAAGCTAAACAAAAACAAGAAGTTGGTGAAGAAACTTGCCAAGAAGTATCATGCCTTCTTAGCTTCTGAAGCTGTTATCAAGCAAATTCCCCGTCTTCTTGGCCCTGGGCTCAACAAGGCAGGAAAGTTTCCCACCCTTGTTACTCACCAAGAATCCCTTGAGTCTAAAGTTAATGAGACAAAGGCAATGGTTAAGTTCCAATTGAAGAAAGTTCTTTGCATGGGCGTGGCTGTGGGTAATGTTGCCATGGAGGAGAAGCAAGTCTTTCAAAATGTTCAAATGAGCGTCAATTTCCTTGTTTCATTATTGAAAAAGAACTGGCAAAACGTGAGGTGCTTGTACCTGAAGAGTACTATGGGGAAGGCATATCGGGTCTTCTGA

Protein sequence

MSKLQSDALREAISAIFVDSNEKKRKFTETIELQIGLKNYDPQKDKRFSGSVKLPHIPRPKMKICMLGDALHVEEAEKIGLDYMDVEGLKKLNKNKKLVKKLAKKYHAFLASEAVIKQIPRLLGPGLNKAGKFPTLVTHQESLESKVNETKAMVKFQLKKVLCMGVAVGNVAMEEKQVFQNVQMSVNFLVSLLKKNWQNVRCLYLKSTMGKAYRVF

Homology

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BLAST of MC02g_new0053 vs. ExPASy Swiss-Prot
Match: B8B9K6 (60S ribosomal protein L10a OS=Oryza sativa subsp. indica OX=39946 GN=RPL10A PE=3 SV=1)

HSP 1 Score: 380.2 bits (975), Expect = 1.6e-104
Identity = 191/216 (88.43%), Postives = 204/216 (94.44%), Query Frame = 0


Query: 1   MSKLQSDALREAISAIFVDSNEKKRKFTETIELQIGLKNYDPQKDKRFSGSVKLPHIPRP 60
           MSKLQS+ L+EAIS +  +S EK RKFTET+ELQIGLKNYDPQKDKRFSGSVKLPHIPRP
Sbjct: 1   MSKLQSEVLKEAISQVVGESKEKGRKFTETVELQIGLKNYDPQKDKRFSGSVKLPHIPRP 60

Query: 61  KMKICMLGDALHVEEAEKIGLDYMDVEGLKKLNKNKKLVKKLAKKYHAFLASEAVIKQIP 120
           KMK+CMLGDA HVEEAEKIGLDYMDVE LKK+NKNKKLVKKLAKKYHAFLASEA+IKQIP
Sbjct: 61  KMKVCMLGDAQHVEEAEKIGLDYMDVEALKKMNKNKKLVKKLAKKYHAFLASEAIIKQIP 120

Query: 121 RLLGPGLNKAGKFPTLVTHQESLESKVNETKAMVKFQLKKVLCMGVAVGNVAMEEKQVFQ 180
           RLLGPGLNKAGKFPTLVTHQESLESKVNETKA VKFQLKKVLCMGVAVGN++MEEKQ+ Q
Sbjct: 121 RLLGPGLNKAGKFPTLVTHQESLESKVNETKATVKFQLKKVLCMGVAVGNLSMEEKQIQQ 180

Query: 181 NVQMSVNFLVSLLKKNWQNVRCLYLKSTMGKAYRVF 217
           N+QMSVNFLVSLLKKNWQNVRCLY+KSTMGK  RVF
Sbjct: 181 NIQMSVNFLVSLLKKNWQNVRCLYIKSTMGKPIRVF 216

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BLAST of MC02g_new0053 vs. ExPASy Swiss-Prot
Match: B7F845 (60S ribosomal protein L10a OS=Oryza sativa subsp. japonica OX=39947 GN=RPL10A PE=1 SV=1)

HSP 1 Score: 380.2 bits (975), Expect = 1.6e-104
Identity = 191/216 (88.43%), Postives = 204/216 (94.44%), Query Frame = 0


Query: 1   MSKLQSDALREAISAIFVDSNEKKRKFTETIELQIGLKNYDPQKDKRFSGSVKLPHIPRP 60
           MSKLQS+ L+EAIS +  +S EK RKFTET+ELQIGLKNYDPQKDKRFSGSVKLPHIPRP
Sbjct: 1   MSKLQSEVLKEAISQVVGESKEKGRKFTETVELQIGLKNYDPQKDKRFSGSVKLPHIPRP 60

Query: 61  KMKICMLGDALHVEEAEKIGLDYMDVEGLKKLNKNKKLVKKLAKKYHAFLASEAVIKQIP 120
           KMK+CMLGDA HVEEAEKIGLDYMDVE LKK+NKNKKLVKKLAKKYHAFLASEA+IKQIP
Sbjct: 61  KMKVCMLGDAQHVEEAEKIGLDYMDVEALKKMNKNKKLVKKLAKKYHAFLASEAIIKQIP 120

Query: 121 RLLGPGLNKAGKFPTLVTHQESLESKVNETKAMVKFQLKKVLCMGVAVGNVAMEEKQVFQ 180
           RLLGPGLNKAGKFPTLVTHQESLESKVNETKA VKFQLKKVLCMGVAVGN++MEEKQ+ Q
Sbjct: 121 RLLGPGLNKAGKFPTLVTHQESLESKVNETKATVKFQLKKVLCMGVAVGNLSMEEKQIQQ 180

Query: 181 NVQMSVNFLVSLLKKNWQNVRCLYLKSTMGKAYRVF 217
           N+QMSVNFLVSLLKKNWQNVRCLY+KSTMGK  RVF
Sbjct: 181 NIQMSVNFLVSLLKKNWQNVRCLYIKSTMGKPIRVF 216

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BLAST of MC02g_new0053 vs. ExPASy Swiss-Prot
Match: Q8VZB9 (60S ribosomal protein L10a-1 OS=Arabidopsis thaliana OX=3702 GN=RPL10AA PE=1 SV=1)

HSP 1 Score: 371.3 bits (952), Expect = 7.3e-102
Identity = 190/216 (87.96%), Postives = 201/216 (93.06%), Query Frame = 0


Query: 1   MSKLQSDALREAISAIFVDSNEKKRKFTETIELQIGLKNYDPQKDKRFSGSVKLPHIPRP 60
           MSKLQS+A+REAI+ I   S  KKR F ETIELQIGLKNYDPQKDKRFSGSVKLPHIPRP
Sbjct: 1   MSKLQSEAVREAITTITGKSEAKKRNFVETIELQIGLKNYDPQKDKRFSGSVKLPHIPRP 60

Query: 61  KMKICMLGDALHVEEAEKIGLDYMDVEGLKKLNKNKKLVKKLAKKYHAFLASEAVIKQIP 120
           KMKICMLGDA HVEEAEK+GL+ MDVE LKKLNKNKKLVKKLAKKYHAFLASE+VIKQIP
Sbjct: 61  KMKICMLGDAQHVEEAEKMGLENMDVESLKKLNKNKKLVKKLAKKYHAFLASESVIKQIP 120

Query: 121 RLLGPGLNKAGKFPTLVTHQESLESKVNETKAMVKFQLKKVLCMGVAVGNVAMEEKQVFQ 180
           RLLGPGLNKAGKFPTLV+HQESLESKVNETKA VKFQLKKVLCMGVAVGN++MEEKQ+FQ
Sbjct: 121 RLLGPGLNKAGKFPTLVSHQESLESKVNETKATVKFQLKKVLCMGVAVGNLSMEEKQIFQ 180

Query: 181 NVQMSVNFLVSLLKKNWQNVRCLYLKSTMGKAYRVF 217
           NVQMSVNFLVSLLKKNWQNVRCLYLKSTMG   R+F
Sbjct: 181 NVQMSVNFLVSLLKKNWQNVRCLYLKSTMGPPQRIF 216

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BLAST of MC02g_new0053 vs. ExPASy Swiss-Prot
Match: P59231 (60S ribosomal protein L10a-3 OS=Arabidopsis thaliana OX=3702 GN=RPL10AC PE=1 SV=1)

HSP 1 Score: 369.4 bits (947), Expect = 2.8e-101
Identity = 191/217 (88.02%), Postives = 202/217 (93.09%), Query Frame = 0


Query: 1   MSKLQSDALREAISAIFVDSNE-KKRKFTETIELQIGLKNYDPQKDKRFSGSVKLPHIPR 60
           MSKLQS+A+REAIS+I     E K R FTETIELQIGLKNYDPQKDKRFSGSVKLPH+PR
Sbjct: 1   MSKLQSEAVREAISSIITHCKETKPRNFTETIELQIGLKNYDPQKDKRFSGSVKLPHVPR 60

Query: 61  PKMKICMLGDALHVEEAEKIGLDYMDVEGLKKLNKNKKLVKKLAKKYHAFLASEAVIKQI 120
           PKMKICMLGDA HVEEAEKIGL+ MDVE LKKLNKNKKLVKKLAKK+HAFLASE+VIKQI
Sbjct: 61  PKMKICMLGDAQHVEEAEKIGLESMDVEALKKLNKNKKLVKKLAKKFHAFLASESVIKQI 120

Query: 121 PRLLGPGLNKAGKFPTLVTHQESLESKVNETKAMVKFQLKKVLCMGVAVGNVAMEEKQVF 180
           PRLLGPGLNKAGKFPTLV+HQESLESKVNETKA VKFQLKKVLCMGVAVGN++MEEKQ+F
Sbjct: 121 PRLLGPGLNKAGKFPTLVSHQESLESKVNETKATVKFQLKKVLCMGVAVGNLSMEEKQIF 180

Query: 181 QNVQMSVNFLVSLLKKNWQNVRCLYLKSTMGKAYRVF 217
           QNVQMSVNFLVSLLKKNWQNVRCLYLKSTMG   RVF
Sbjct: 181 QNVQMSVNFLVSLLKKNWQNVRCLYLKSTMGPPNRVF 217

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BLAST of MC02g_new0053 vs. ExPASy Swiss-Prot
Match: P59230 (60S ribosomal protein L10a-2 OS=Arabidopsis thaliana OX=3702 GN=RPL10AB PE=1 SV=1)

HSP 1 Score: 368.2 bits (944), Expect = 6.2e-101
Identity = 188/216 (87.04%), Postives = 200/216 (92.59%), Query Frame = 0


Query: 1   MSKLQSDALREAISAIFVDSNEKKRKFTETIELQIGLKNYDPQKDKRFSGSVKLPHIPRP 60
           MSKLQS+A+REAI+ I   S EKKR F ET+ELQIGLKNYDPQKDKRFSGSVKLPHIPRP
Sbjct: 1   MSKLQSEAVREAITTIKGKSEEKKRNFVETVELQIGLKNYDPQKDKRFSGSVKLPHIPRP 60

Query: 61  KMKICMLGDALHVEEAEKIGLDYMDVEGLKKLNKNKKLVKKLAKKYHAFLASEAVIKQIP 120
           KMKICMLGDA HVEEAEK+GL  MDVE LKKLNKNKKLVKKLAK YHAFLASE+VIKQIP
Sbjct: 61  KMKICMLGDAQHVEEAEKMGLSNMDVEALKKLNKNKKLVKKLAKSYHAFLASESVIKQIP 120

Query: 121 RLLGPGLNKAGKFPTLVTHQESLESKVNETKAMVKFQLKKVLCMGVAVGNVAMEEKQVFQ 180
           RLLGPGLNKAGKFPTLV+HQESLE+KVNETKA VKFQLKKVLCMGVAVGN++MEEKQ+FQ
Sbjct: 121 RLLGPGLNKAGKFPTLVSHQESLEAKVNETKATVKFQLKKVLCMGVAVGNLSMEEKQLFQ 180

Query: 181 NVQMSVNFLVSLLKKNWQNVRCLYLKSTMGKAYRVF 217
           NVQMSVNFLVSLLKKNWQNVRCLYLKSTMG   R+F
Sbjct: 181 NVQMSVNFLVSLLKKNWQNVRCLYLKSTMGPPQRIF 216

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BLAST of MC02g_new0053 vs. NCBI nr
Match: XP_022153072.1 (60S ribosomal protein L10a-like [Momordica charantia] >XP_022153073.1 60S ribosomal protein L10a-like [Momordica charantia])

HSP 1 Score: 417 bits (1073), Expect = 6.06e-147
Identity = 216/216 (100.00%), Postives = 216/216 (100.00%), Query Frame = 0


Query: 1   MSKLQSDALREAISAIFVDSNEKKRKFTETIELQIGLKNYDPQKDKRFSGSVKLPHIPRP 60
           MSKLQSDALREAISAIFVDSNEKKRKFTETIELQIGLKNYDPQKDKRFSGSVKLPHIPRP
Sbjct: 1   MSKLQSDALREAISAIFVDSNEKKRKFTETIELQIGLKNYDPQKDKRFSGSVKLPHIPRP 60

Query: 61  KMKICMLGDALHVEEAEKIGLDYMDVEGLKKLNKNKKLVKKLAKKYHAFLASEAVIKQIP 120
           KMKICMLGDALHVEEAEKIGLDYMDVEGLKKLNKNKKLVKKLAKKYHAFLASEAVIKQIP
Sbjct: 61  KMKICMLGDALHVEEAEKIGLDYMDVEGLKKLNKNKKLVKKLAKKYHAFLASEAVIKQIP 120

Query: 121 RLLGPGLNKAGKFPTLVTHQESLESKVNETKAMVKFQLKKVLCMGVAVGNVAMEEKQVFQ 180
           RLLGPGLNKAGKFPTLVTHQESLESKVNETKAMVKFQLKKVLCMGVAVGNVAMEEKQVFQ
Sbjct: 121 RLLGPGLNKAGKFPTLVTHQESLESKVNETKAMVKFQLKKVLCMGVAVGNVAMEEKQVFQ 180

Query: 181 NVQMSVNFLVSLLKKNWQNVRCLYLKSTMGKAYRVF 216
           NVQMSVNFLVSLLKKNWQNVRCLYLKSTMGKAYRVF
Sbjct: 181 NVQMSVNFLVSLLKKNWQNVRCLYLKSTMGKAYRVF 216

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BLAST of MC02g_new0053 vs. NCBI nr
Match: XP_022932197.1 (60S ribosomal protein L10a-like [Cucurbita moschata] >XP_022970262.1 60S ribosomal protein L10a-like [Cucurbita maxima] >XP_023520953.1 60S ribosomal protein L10a-like [Cucurbita pepo subsp. pepo] >KAG6583662.1 60S ribosomal protein L10a, partial [Cucurbita argyrosperma subsp. sororia] >KAG7019322.1 60S ribosomal protein L10a [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 412 bits (1059), Expect = 8.26e-145
Identity = 212/216 (98.15%), Postives = 215/216 (99.54%), Query Frame = 0


Query: 1   MSKLQSDALREAISAIFVDSNEKKRKFTETIELQIGLKNYDPQKDKRFSGSVKLPHIPRP 60
           MSKLQS+ALREAIS+IF DSNEKKRKFTETIELQIGLKNYDPQKDKRFSGSVKLPHIPRP
Sbjct: 1   MSKLQSEALREAISSIFTDSNEKKRKFTETIELQIGLKNYDPQKDKRFSGSVKLPHIPRP 60

Query: 61  KMKICMLGDALHVEEAEKIGLDYMDVEGLKKLNKNKKLVKKLAKKYHAFLASEAVIKQIP 120
           KMKICMLGDALHVEEAEKIGLDYMDVEGLKKLNKNKKLVKKLAKKYHAFLASEAVIKQIP
Sbjct: 61  KMKICMLGDALHVEEAEKIGLDYMDVEGLKKLNKNKKLVKKLAKKYHAFLASEAVIKQIP 120

Query: 121 RLLGPGLNKAGKFPTLVTHQESLESKVNETKAMVKFQLKKVLCMGVAVGNVAMEEKQVFQ 180
           RLLGPGLNKAGKFPTLVTHQESLESKVNETKAMVKFQLKKVLCMGVAVGNVAMEEKQVFQ
Sbjct: 121 RLLGPGLNKAGKFPTLVTHQESLESKVNETKAMVKFQLKKVLCMGVAVGNVAMEEKQVFQ 180

Query: 181 NVQMSVNFLVSLLKKNWQNVRCLYLKSTMGKAYRVF 216
           NVQMSVNFLVSLLKKNWQNVRCLYLKSTMGK+YRVF
Sbjct: 181 NVQMSVNFLVSLLKKNWQNVRCLYLKSTMGKSYRVF 216

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BLAST of MC02g_new0053 vs. NCBI nr
Match: XP_022142655.1 (60S ribosomal protein L10a [Momordica charantia] >XP_022142656.1 60S ribosomal protein L10a [Momordica charantia])

HSP 1 Score: 410 bits (1055), Expect = 3.36e-144
Identity = 211/216 (97.69%), Postives = 215/216 (99.54%), Query Frame = 0


Query: 1   MSKLQSDALREAISAIFVDSNEKKRKFTETIELQIGLKNYDPQKDKRFSGSVKLPHIPRP 60
           MSKLQSDALREAI++IF DSNEKKRKFTETIELQIGLKNYDPQKDKRFSGSVKLPHIPRP
Sbjct: 1   MSKLQSDALREAITSIFSDSNEKKRKFTETIELQIGLKNYDPQKDKRFSGSVKLPHIPRP 60

Query: 61  KMKICMLGDALHVEEAEKIGLDYMDVEGLKKLNKNKKLVKKLAKKYHAFLASEAVIKQIP 120
           KMKICMLGDALHVEEAEKIGLDYMDVEGLKKLNKNKKLVKKLAKKYHAFLASEAVIKQIP
Sbjct: 61  KMKICMLGDALHVEEAEKIGLDYMDVEGLKKLNKNKKLVKKLAKKYHAFLASEAVIKQIP 120

Query: 121 RLLGPGLNKAGKFPTLVTHQESLESKVNETKAMVKFQLKKVLCMGVAVGNVAMEEKQVFQ 180
           RLLGPGLNKAGKFPTLVTHQESLESKVNETKAMVKFQLKKVLCMGVAVGNV+MEEKQVFQ
Sbjct: 121 RLLGPGLNKAGKFPTLVTHQESLESKVNETKAMVKFQLKKVLCMGVAVGNVSMEEKQVFQ 180

Query: 181 NVQMSVNFLVSLLKKNWQNVRCLYLKSTMGKAYRVF 216
           NVQMSVNFLVSLLKKNWQNVRCLYLKSTMGK+YRVF
Sbjct: 181 NVQMSVNFLVSLLKKNWQNVRCLYLKSTMGKSYRVF 216

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BLAST of MC02g_new0053 vs. NCBI nr
Match: XP_008458587.1 (PREDICTED: 60S ribosomal protein L10a [Cucumis melo] >XP_011657068.1 60S ribosomal protein L10a [Cucumis sativus] >KGN46947.1 hypothetical protein Csa_021060 [Cucumis sativus])

HSP 1 Score: 409 bits (1052), Expect = 9.64e-144
Identity = 210/216 (97.22%), Postives = 213/216 (98.61%), Query Frame = 0


Query: 1   MSKLQSDALREAISAIFVDSNEKKRKFTETIELQIGLKNYDPQKDKRFSGSVKLPHIPRP 60
           MSKLQSDALREAIS+IF DS EKKRKFTETIELQIGLKNYDPQKDKRFSGSVKLPHIPRP
Sbjct: 1   MSKLQSDALREAISSIFADSGEKKRKFTETIELQIGLKNYDPQKDKRFSGSVKLPHIPRP 60

Query: 61  KMKICMLGDALHVEEAEKIGLDYMDVEGLKKLNKNKKLVKKLAKKYHAFLASEAVIKQIP 120
           KMKICMLGDA HVEEAEKIGLDYMDVEGLKKLNKNKKLVKKLAKKYHAFLASEA+IKQIP
Sbjct: 61  KMKICMLGDASHVEEAEKIGLDYMDVEGLKKLNKNKKLVKKLAKKYHAFLASEAIIKQIP 120

Query: 121 RLLGPGLNKAGKFPTLVTHQESLESKVNETKAMVKFQLKKVLCMGVAVGNVAMEEKQVFQ 180
           RLLGPGLNKAGKFPTLVTHQESLESKVNETKAMVKFQLKKVLCMGVAVGN+AMEEKQVFQ
Sbjct: 121 RLLGPGLNKAGKFPTLVTHQESLESKVNETKAMVKFQLKKVLCMGVAVGNIAMEEKQVFQ 180

Query: 181 NVQMSVNFLVSLLKKNWQNVRCLYLKSTMGKAYRVF 216
           NVQMSVNFLVSLLKKNWQNVRCLYLKSTMGKAYRVF
Sbjct: 181 NVQMSVNFLVSLLKKNWQNVRCLYLKSTMGKAYRVF 216

[Close]

BLAST of MC02g_new0053 vs. NCBI nr
Match: XP_022945884.1 (60S ribosomal protein L10a [Cucurbita moschata] >XP_023541044.1 60S ribosomal protein L10a [Cucurbita pepo subsp. pepo] >KAG6573621.1 60S ribosomal protein L10a, partial [Cucurbita argyrosperma subsp. sororia] >KAG7012702.1 60S ribosomal protein L10a [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 409 bits (1052), Expect = 9.64e-144
Identity = 210/216 (97.22%), Postives = 214/216 (99.07%), Query Frame = 0


Query: 1   MSKLQSDALREAISAIFVDSNEKKRKFTETIELQIGLKNYDPQKDKRFSGSVKLPHIPRP 60
           MSKLQS+ALREAIS+IF DSNEKKR FTETIELQIGLKNYDPQKDKRFSGSVKLPHIPRP
Sbjct: 1   MSKLQSEALREAISSIFTDSNEKKRNFTETIELQIGLKNYDPQKDKRFSGSVKLPHIPRP 60

Query: 61  KMKICMLGDALHVEEAEKIGLDYMDVEGLKKLNKNKKLVKKLAKKYHAFLASEAVIKQIP 120
           KMK+CMLGDALHVEEAEKIGLDYMDVEGLKKLNKNKKLVKKLAKKYHAFLASEAVIKQIP
Sbjct: 61  KMKLCMLGDALHVEEAEKIGLDYMDVEGLKKLNKNKKLVKKLAKKYHAFLASEAVIKQIP 120

Query: 121 RLLGPGLNKAGKFPTLVTHQESLESKVNETKAMVKFQLKKVLCMGVAVGNVAMEEKQVFQ 180
           RLLGPGLNKAGKFPTLVTHQESLESKVNETKAMVKFQLKKVLCMGVAVGNVAMEEKQVFQ
Sbjct: 121 RLLGPGLNKAGKFPTLVTHQESLESKVNETKAMVKFQLKKVLCMGVAVGNVAMEEKQVFQ 180

Query: 181 NVQMSVNFLVSLLKKNWQNVRCLYLKSTMGKAYRVF 216
           NVQMSVNFLVSLLKKNWQNVRCLYLKSTMGK+YRVF
Sbjct: 181 NVQMSVNFLVSLLKKNWQNVRCLYLKSTMGKSYRVF 216

[Close]

BLAST of MC02g_new0053 vs. ExPASy TrEMBL
Match: A0A6J1DHY4 (Ribosomal protein OS=Momordica charantia OX=3673 GN=LOC111020664 PE=3 SV=1)

HSP 1 Score: 417 bits (1073), Expect = 2.93e-147
Identity = 216/216 (100.00%), Postives = 216/216 (100.00%), Query Frame = 0


Query: 1   MSKLQSDALREAISAIFVDSNEKKRKFTETIELQIGLKNYDPQKDKRFSGSVKLPHIPRP 60
           MSKLQSDALREAISAIFVDSNEKKRKFTETIELQIGLKNYDPQKDKRFSGSVKLPHIPRP
Sbjct: 1   MSKLQSDALREAISAIFVDSNEKKRKFTETIELQIGLKNYDPQKDKRFSGSVKLPHIPRP 60

Query: 61  KMKICMLGDALHVEEAEKIGLDYMDVEGLKKLNKNKKLVKKLAKKYHAFLASEAVIKQIP 120
           KMKICMLGDALHVEEAEKIGLDYMDVEGLKKLNKNKKLVKKLAKKYHAFLASEAVIKQIP
Sbjct: 61  KMKICMLGDALHVEEAEKIGLDYMDVEGLKKLNKNKKLVKKLAKKYHAFLASEAVIKQIP 120

Query: 121 RLLGPGLNKAGKFPTLVTHQESLESKVNETKAMVKFQLKKVLCMGVAVGNVAMEEKQVFQ 180
           RLLGPGLNKAGKFPTLVTHQESLESKVNETKAMVKFQLKKVLCMGVAVGNVAMEEKQVFQ
Sbjct: 121 RLLGPGLNKAGKFPTLVTHQESLESKVNETKAMVKFQLKKVLCMGVAVGNVAMEEKQVFQ 180

Query: 181 NVQMSVNFLVSLLKKNWQNVRCLYLKSTMGKAYRVF 216
           NVQMSVNFLVSLLKKNWQNVRCLYLKSTMGKAYRVF
Sbjct: 181 NVQMSVNFLVSLLKKNWQNVRCLYLKSTMGKAYRVF 216

[Close]

BLAST of MC02g_new0053 vs. ExPASy TrEMBL
Match: A0A6J1HYM1 (Ribosomal protein OS=Cucurbita maxima OX=3661 GN=LOC111469275 PE=3 SV=1)

HSP 1 Score: 412 bits (1059), Expect = 4.00e-145
Identity = 212/216 (98.15%), Postives = 215/216 (99.54%), Query Frame = 0


Query: 1   MSKLQSDALREAISAIFVDSNEKKRKFTETIELQIGLKNYDPQKDKRFSGSVKLPHIPRP 60
           MSKLQS+ALREAIS+IF DSNEKKRKFTETIELQIGLKNYDPQKDKRFSGSVKLPHIPRP
Sbjct: 1   MSKLQSEALREAISSIFTDSNEKKRKFTETIELQIGLKNYDPQKDKRFSGSVKLPHIPRP 60

Query: 61  KMKICMLGDALHVEEAEKIGLDYMDVEGLKKLNKNKKLVKKLAKKYHAFLASEAVIKQIP 120
           KMKICMLGDALHVEEAEKIGLDYMDVEGLKKLNKNKKLVKKLAKKYHAFLASEAVIKQIP
Sbjct: 61  KMKICMLGDALHVEEAEKIGLDYMDVEGLKKLNKNKKLVKKLAKKYHAFLASEAVIKQIP 120

Query: 121 RLLGPGLNKAGKFPTLVTHQESLESKVNETKAMVKFQLKKVLCMGVAVGNVAMEEKQVFQ 180
           RLLGPGLNKAGKFPTLVTHQESLESKVNETKAMVKFQLKKVLCMGVAVGNVAMEEKQVFQ
Sbjct: 121 RLLGPGLNKAGKFPTLVTHQESLESKVNETKAMVKFQLKKVLCMGVAVGNVAMEEKQVFQ 180

Query: 181 NVQMSVNFLVSLLKKNWQNVRCLYLKSTMGKAYRVF 216
           NVQMSVNFLVSLLKKNWQNVRCLYLKSTMGK+YRVF
Sbjct: 181 NVQMSVNFLVSLLKKNWQNVRCLYLKSTMGKSYRVF 216

[Close]

BLAST of MC02g_new0053 vs. ExPASy TrEMBL
Match: A0A6J1EVZ1 (Ribosomal protein OS=Cucurbita moschata OX=3662 GN=LOC111438515 PE=3 SV=1)

HSP 1 Score: 412 bits (1059), Expect = 4.00e-145
Identity = 212/216 (98.15%), Postives = 215/216 (99.54%), Query Frame = 0


Query: 1   MSKLQSDALREAISAIFVDSNEKKRKFTETIELQIGLKNYDPQKDKRFSGSVKLPHIPRP 60
           MSKLQS+ALREAIS+IF DSNEKKRKFTETIELQIGLKNYDPQKDKRFSGSVKLPHIPRP
Sbjct: 1   MSKLQSEALREAISSIFTDSNEKKRKFTETIELQIGLKNYDPQKDKRFSGSVKLPHIPRP 60

Query: 61  KMKICMLGDALHVEEAEKIGLDYMDVEGLKKLNKNKKLVKKLAKKYHAFLASEAVIKQIP 120
           KMKICMLGDALHVEEAEKIGLDYMDVEGLKKLNKNKKLVKKLAKKYHAFLASEAVIKQIP
Sbjct: 61  KMKICMLGDALHVEEAEKIGLDYMDVEGLKKLNKNKKLVKKLAKKYHAFLASEAVIKQIP 120

Query: 121 RLLGPGLNKAGKFPTLVTHQESLESKVNETKAMVKFQLKKVLCMGVAVGNVAMEEKQVFQ 180
           RLLGPGLNKAGKFPTLVTHQESLESKVNETKAMVKFQLKKVLCMGVAVGNVAMEEKQVFQ
Sbjct: 121 RLLGPGLNKAGKFPTLVTHQESLESKVNETKAMVKFQLKKVLCMGVAVGNVAMEEKQVFQ 180

Query: 181 NVQMSVNFLVSLLKKNWQNVRCLYLKSTMGKAYRVF 216
           NVQMSVNFLVSLLKKNWQNVRCLYLKSTMGK+YRVF
Sbjct: 181 NVQMSVNFLVSLLKKNWQNVRCLYLKSTMGKSYRVF 216

[Close]

BLAST of MC02g_new0053 vs. ExPASy TrEMBL
Match: A0A6J1CLJ2 (Ribosomal protein OS=Momordica charantia OX=3673 GN=LOC111012713 PE=3 SV=1)

HSP 1 Score: 410 bits (1055), Expect = 1.63e-144
Identity = 211/216 (97.69%), Postives = 215/216 (99.54%), Query Frame = 0


Query: 1   MSKLQSDALREAISAIFVDSNEKKRKFTETIELQIGLKNYDPQKDKRFSGSVKLPHIPRP 60
           MSKLQSDALREAI++IF DSNEKKRKFTETIELQIGLKNYDPQKDKRFSGSVKLPHIPRP
Sbjct: 1   MSKLQSDALREAITSIFSDSNEKKRKFTETIELQIGLKNYDPQKDKRFSGSVKLPHIPRP 60

Query: 61  KMKICMLGDALHVEEAEKIGLDYMDVEGLKKLNKNKKLVKKLAKKYHAFLASEAVIKQIP 120
           KMKICMLGDALHVEEAEKIGLDYMDVEGLKKLNKNKKLVKKLAKKYHAFLASEAVIKQIP
Sbjct: 61  KMKICMLGDALHVEEAEKIGLDYMDVEGLKKLNKNKKLVKKLAKKYHAFLASEAVIKQIP 120

Query: 121 RLLGPGLNKAGKFPTLVTHQESLESKVNETKAMVKFQLKKVLCMGVAVGNVAMEEKQVFQ 180
           RLLGPGLNKAGKFPTLVTHQESLESKVNETKAMVKFQLKKVLCMGVAVGNV+MEEKQVFQ
Sbjct: 121 RLLGPGLNKAGKFPTLVTHQESLESKVNETKAMVKFQLKKVLCMGVAVGNVSMEEKQVFQ 180

Query: 181 NVQMSVNFLVSLLKKNWQNVRCLYLKSTMGKAYRVF 216
           NVQMSVNFLVSLLKKNWQNVRCLYLKSTMGK+YRVF
Sbjct: 181 NVQMSVNFLVSLLKKNWQNVRCLYLKSTMGKSYRVF 216

[Close]

BLAST of MC02g_new0053 vs. ExPASy TrEMBL
Match: A0A0A0KEW8 (Ribosomal protein OS=Cucumis sativus OX=3659 GN=Csa_6G152330 PE=3 SV=1)

HSP 1 Score: 409 bits (1052), Expect = 4.67e-144
Identity = 210/216 (97.22%), Postives = 213/216 (98.61%), Query Frame = 0


Query: 1   MSKLQSDALREAISAIFVDSNEKKRKFTETIELQIGLKNYDPQKDKRFSGSVKLPHIPRP 60
           MSKLQSDALREAIS+IF DS EKKRKFTETIELQIGLKNYDPQKDKRFSGSVKLPHIPRP
Sbjct: 1   MSKLQSDALREAISSIFADSGEKKRKFTETIELQIGLKNYDPQKDKRFSGSVKLPHIPRP 60

Query: 61  KMKICMLGDALHVEEAEKIGLDYMDVEGLKKLNKNKKLVKKLAKKYHAFLASEAVIKQIP 120
           KMKICMLGDA HVEEAEKIGLDYMDVEGLKKLNKNKKLVKKLAKKYHAFLASEA+IKQIP
Sbjct: 61  KMKICMLGDASHVEEAEKIGLDYMDVEGLKKLNKNKKLVKKLAKKYHAFLASEAIIKQIP 120

Query: 121 RLLGPGLNKAGKFPTLVTHQESLESKVNETKAMVKFQLKKVLCMGVAVGNVAMEEKQVFQ 180
           RLLGPGLNKAGKFPTLVTHQESLESKVNETKAMVKFQLKKVLCMGVAVGN+AMEEKQVFQ
Sbjct: 121 RLLGPGLNKAGKFPTLVTHQESLESKVNETKAMVKFQLKKVLCMGVAVGNIAMEEKQVFQ 180

Query: 181 NVQMSVNFLVSLLKKNWQNVRCLYLKSTMGKAYRVF 216
           NVQMSVNFLVSLLKKNWQNVRCLYLKSTMGKAYRVF
Sbjct: 181 NVQMSVNFLVSLLKKNWQNVRCLYLKSTMGKAYRVF 216

[Close]

BLAST of MC02g_new0053 vs. TAIR 10
Match: AT1G08360.1 (Ribosomal protein L1p/L10e family )

HSP 1 Score: 371.3 bits (952), Expect = 5.2e-103
Identity = 190/216 (87.96%), Postives = 201/216 (93.06%), Query Frame = 0


Query: 1   MSKLQSDALREAISAIFVDSNEKKRKFTETIELQIGLKNYDPQKDKRFSGSVKLPHIPRP 60
           MSKLQS+A+REAI+ I   S  KKR F ETIELQIGLKNYDPQKDKRFSGSVKLPHIPRP
Sbjct: 1   MSKLQSEAVREAITTITGKSEAKKRNFVETIELQIGLKNYDPQKDKRFSGSVKLPHIPRP 60

Query: 61  KMKICMLGDALHVEEAEKIGLDYMDVEGLKKLNKNKKLVKKLAKKYHAFLASEAVIKQIP 120
           KMKICMLGDA HVEEAEK+GL+ MDVE LKKLNKNKKLVKKLAKKYHAFLASE+VIKQIP
Sbjct: 61  KMKICMLGDAQHVEEAEKMGLENMDVESLKKLNKNKKLVKKLAKKYHAFLASESVIKQIP 120

Query: 121 RLLGPGLNKAGKFPTLVTHQESLESKVNETKAMVKFQLKKVLCMGVAVGNVAMEEKQVFQ 180
           RLLGPGLNKAGKFPTLV+HQESLESKVNETKA VKFQLKKVLCMGVAVGN++MEEKQ+FQ
Sbjct: 121 RLLGPGLNKAGKFPTLVSHQESLESKVNETKATVKFQLKKVLCMGVAVGNLSMEEKQIFQ 180

Query: 181 NVQMSVNFLVSLLKKNWQNVRCLYLKSTMGKAYRVF 217
           NVQMSVNFLVSLLKKNWQNVRCLYLKSTMG   R+F
Sbjct: 181 NVQMSVNFLVSLLKKNWQNVRCLYLKSTMGPPQRIF 216

[Close]

BLAST of MC02g_new0053 vs. TAIR 10
Match: AT5G22440.1 (Ribosomal protein L1p/L10e family )

HSP 1 Score: 369.4 bits (947), Expect = 2.0e-102
Identity = 191/217 (88.02%), Postives = 202/217 (93.09%), Query Frame = 0


Query: 1   MSKLQSDALREAISAIFVDSNE-KKRKFTETIELQIGLKNYDPQKDKRFSGSVKLPHIPR 60
           MSKLQS+A+REAIS+I     E K R FTETIELQIGLKNYDPQKDKRFSGSVKLPH+PR
Sbjct: 1   MSKLQSEAVREAISSIITHCKETKPRNFTETIELQIGLKNYDPQKDKRFSGSVKLPHVPR 60

Query: 61  PKMKICMLGDALHVEEAEKIGLDYMDVEGLKKLNKNKKLVKKLAKKYHAFLASEAVIKQI 120
           PKMKICMLGDA HVEEAEKIGL+ MDVE LKKLNKNKKLVKKLAKK+HAFLASE+VIKQI
Sbjct: 61  PKMKICMLGDAQHVEEAEKIGLESMDVEALKKLNKNKKLVKKLAKKFHAFLASESVIKQI 120

Query: 121 PRLLGPGLNKAGKFPTLVTHQESLESKVNETKAMVKFQLKKVLCMGVAVGNVAMEEKQVF 180
           PRLLGPGLNKAGKFPTLV+HQESLESKVNETKA VKFQLKKVLCMGVAVGN++MEEKQ+F
Sbjct: 121 PRLLGPGLNKAGKFPTLVSHQESLESKVNETKATVKFQLKKVLCMGVAVGNLSMEEKQIF 180

Query: 181 QNVQMSVNFLVSLLKKNWQNVRCLYLKSTMGKAYRVF 217
           QNVQMSVNFLVSLLKKNWQNVRCLYLKSTMG   RVF
Sbjct: 181 QNVQMSVNFLVSLLKKNWQNVRCLYLKSTMGPPNRVF 217

[Close]

BLAST of MC02g_new0053 vs. TAIR 10
Match: AT5G22440.2 (Ribosomal protein L1p/L10e family )

HSP 1 Score: 369.4 bits (947), Expect = 2.0e-102
Identity = 191/217 (88.02%), Postives = 202/217 (93.09%), Query Frame = 0


Query: 1   MSKLQSDALREAISAIFVDSNE-KKRKFTETIELQIGLKNYDPQKDKRFSGSVKLPHIPR 60
           MSKLQS+A+REAIS+I     E K R FTETIELQIGLKNYDPQKDKRFSGSVKLPH+PR
Sbjct: 1   MSKLQSEAVREAISSIITHCKETKPRNFTETIELQIGLKNYDPQKDKRFSGSVKLPHVPR 60

Query: 61  PKMKICMLGDALHVEEAEKIGLDYMDVEGLKKLNKNKKLVKKLAKKYHAFLASEAVIKQI 120
           PKMKICMLGDA HVEEAEKIGL+ MDVE LKKLNKNKKLVKKLAKK+HAFLASE+VIKQI
Sbjct: 61  PKMKICMLGDAQHVEEAEKIGLESMDVEALKKLNKNKKLVKKLAKKFHAFLASESVIKQI 120

Query: 121 PRLLGPGLNKAGKFPTLVTHQESLESKVNETKAMVKFQLKKVLCMGVAVGNVAMEEKQVF 180
           PRLLGPGLNKAGKFPTLV+HQESLESKVNETKA VKFQLKKVLCMGVAVGN++MEEKQ+F
Sbjct: 121 PRLLGPGLNKAGKFPTLVSHQESLESKVNETKATVKFQLKKVLCMGVAVGNLSMEEKQIF 180

Query: 181 QNVQMSVNFLVSLLKKNWQNVRCLYLKSTMGKAYRVF 217
           QNVQMSVNFLVSLLKKNWQNVRCLYLKSTMG   RVF
Sbjct: 181 QNVQMSVNFLVSLLKKNWQNVRCLYLKSTMGPPNRVF 217

[Close]

BLAST of MC02g_new0053 vs. TAIR 10
Match: AT2G27530.1 (Ribosomal protein L1p/L10e family )

HSP 1 Score: 368.2 bits (944), Expect = 4.4e-102
Identity = 188/216 (87.04%), Postives = 200/216 (92.59%), Query Frame = 0


Query: 1   MSKLQSDALREAISAIFVDSNEKKRKFTETIELQIGLKNYDPQKDKRFSGSVKLPHIPRP 60
           MSKLQS+A+REAI+ I   S EKKR F ET+ELQIGLKNYDPQKDKRFSGSVKLPHIPRP
Sbjct: 1   MSKLQSEAVREAITTIKGKSEEKKRNFVETVELQIGLKNYDPQKDKRFSGSVKLPHIPRP 60

Query: 61  KMKICMLGDALHVEEAEKIGLDYMDVEGLKKLNKNKKLVKKLAKKYHAFLASEAVIKQIP 120
           KMKICMLGDA HVEEAEK+GL  MDVE LKKLNKNKKLVKKLAK YHAFLASE+VIKQIP
Sbjct: 61  KMKICMLGDAQHVEEAEKMGLSNMDVEALKKLNKNKKLVKKLAKSYHAFLASESVIKQIP 120

Query: 121 RLLGPGLNKAGKFPTLVTHQESLESKVNETKAMVKFQLKKVLCMGVAVGNVAMEEKQVFQ 180
           RLLGPGLNKAGKFPTLV+HQESLE+KVNETKA VKFQLKKVLCMGVAVGN++MEEKQ+FQ
Sbjct: 121 RLLGPGLNKAGKFPTLVSHQESLEAKVNETKATVKFQLKKVLCMGVAVGNLSMEEKQLFQ 180

Query: 181 NVQMSVNFLVSLLKKNWQNVRCLYLKSTMGKAYRVF 217
           NVQMSVNFLVSLLKKNWQNVRCLYLKSTMG   R+F
Sbjct: 181 NVQMSVNFLVSLLKKNWQNVRCLYLKSTMGPPQRIF 216

[Close]

BLAST of MC02g_new0053 vs. TAIR 10
Match: AT2G27530.2 (Ribosomal protein L1p/L10e family )

HSP 1 Score: 368.2 bits (944), Expect = 4.4e-102
Identity = 188/216 (87.04%), Postives = 200/216 (92.59%), Query Frame = 0


Query: 1   MSKLQSDALREAISAIFVDSNEKKRKFTETIELQIGLKNYDPQKDKRFSGSVKLPHIPRP 60
           MSKLQS+A+REAI+ I   S EKKR F ET+ELQIGLKNYDPQKDKRFSGSVKLPHIPRP
Sbjct: 1   MSKLQSEAVREAITTIKGKSEEKKRNFVETVELQIGLKNYDPQKDKRFSGSVKLPHIPRP 60

Query: 61  KMKICMLGDALHVEEAEKIGLDYMDVEGLKKLNKNKKLVKKLAKKYHAFLASEAVIKQIP 120
           KMKICMLGDA HVEEAEK+GL  MDVE LKKLNKNKKLVKKLAK YHAFLASE+VIKQIP
Sbjct: 61  KMKICMLGDAQHVEEAEKMGLSNMDVEALKKLNKNKKLVKKLAKSYHAFLASESVIKQIP 120

Query: 121 RLLGPGLNKAGKFPTLVTHQESLESKVNETKAMVKFQLKKVLCMGVAVGNVAMEEKQVFQ 180
           RLLGPGLNKAGKFPTLV+HQESLE+KVNETKA VKFQLKKVLCMGVAVGN++MEEKQ+FQ
Sbjct: 121 RLLGPGLNKAGKFPTLVSHQESLEAKVNETKATVKFQLKKVLCMGVAVGNLSMEEKQLFQ 180

Query: 181 NVQMSVNFLVSLLKKNWQNVRCLYLKSTMGKAYRVF 217
           NVQMSVNFLVSLLKKNWQNVRCLYLKSTMG   R+F
Sbjct: 181 NVQMSVNFLVSLLKKNWQNVRCLYLKSTMGPPQRIF 216

The following BLAST results are available for this feature:

BLAST of MC02g_new0053 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
B8B9K6	1.6e-104	88.43	60S ribosomal protein L10a OS=Oryza sativa subsp. indica OX=39946 GN=RPL10A PE=3...	[more]
B7F845	1.6e-104	88.43	60S ribosomal protein L10a OS=Oryza sativa subsp. japonica OX=39947 GN=RPL10A PE...	[more]
Q8VZB9	7.3e-102	87.96	60S ribosomal protein L10a-1 OS=Arabidopsis thaliana OX=3702 GN=RPL10AA PE=1 SV=...	[more]
P59231	2.8e-101	88.02	60S ribosomal protein L10a-3 OS=Arabidopsis thaliana OX=3702 GN=RPL10AC PE=1 SV=...	[more]
P59230	6.2e-101	87.04	60S ribosomal protein L10a-2 OS=Arabidopsis thaliana OX=3702 GN=RPL10AB PE=1 SV=...	[more]

BLAST of MC02g_new0053 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022153072.1	6.06e-147	100.00	60S ribosomal protein L10a-like [Momordica charantia] >XP_022153073.1 60S riboso...	[more]
XP_022932197.1	8.26e-145	98.15	60S ribosomal protein L10a-like [Cucurbita moschata] >XP_022970262.1 60S ribosom...	[more]
XP_022142655.1	3.36e-144	97.69	60S ribosomal protein L10a [Momordica charantia] >XP_022142656.1 60S ribosomal p...	[more]
XP_008458587.1	9.64e-144	97.22	PREDICTED: 60S ribosomal protein L10a [Cucumis melo] >XP_011657068.1 60S ribosom...	[more]
XP_022945884.1	9.64e-144	97.22	60S ribosomal protein L10a [Cucurbita moschata] >XP_023541044.1 60S ribosomal pr...	[more]

BLAST of MC02g_new0053 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1DHY4	2.93e-147	100.00	Ribosomal protein OS=Momordica charantia OX=3673 GN=LOC111020664 PE=3 SV=1	[more]
A0A6J1HYM1	4.00e-145	98.15	Ribosomal protein OS=Cucurbita maxima OX=3661 GN=LOC111469275 PE=3 SV=1	[more]
A0A6J1EVZ1	4.00e-145	98.15	Ribosomal protein OS=Cucurbita moschata OX=3662 GN=LOC111438515 PE=3 SV=1	[more]
A0A6J1CLJ2	1.63e-144	97.69	Ribosomal protein OS=Momordica charantia OX=3673 GN=LOC111012713 PE=3 SV=1	[more]
A0A0A0KEW8	4.67e-144	97.22	Ribosomal protein OS=Cucumis sativus OX=3659 GN=Csa_6G152330 PE=3 SV=1	[more]

BLAST of MC02g_new0053 vs. TAIR 10


Match Name	E-value	Identity	Description
AT1G08360.1	5.2e-103	87.96	Ribosomal protein L1p/L10e family	[more]
AT5G22440.1	2.0e-102	88.02	Ribosomal protein L1p/L10e family	[more]
AT5G22440.2	2.0e-102	88.02	Ribosomal protein L1p/L10e family	[more]
AT2G27530.1	4.4e-102	87.04	Ribosomal protein L1p/L10e family	[more]
AT2G27530.2	4.4e-102	87.04	Ribosomal protein L1p/L10e family	[more]

InterPro

Analysis Name: InterPro Annotations of Bitter gourd (Dali-11) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR002143	Ribosomal protein L1	PIRSF	PIRSF002155	RPL1p_RPL1a_RPL10e_RPL1o	coord: 1..216 e-value: 1.4E-48 score: 163.2
None	No IPR available	GENE3D	3.30.190.20		coord: 20..211 e-value: 6.4E-61 score: 207.3
None	No IPR available	PANTHER	PTHR23105	RIBOSOMAL PROTEIN L7AE FAMILY MEMBER	coord: 2..214
None	No IPR available	PANTHER	PTHR23105:SF164	60S RIBOSOMAL PROTEIN L10A-3	coord: 2..214
IPR028364	Ribosomal protein L1/ribosomal biogenesis protein	PFAM	PF00687	Ribosomal_L1	coord: 23..210 e-value: 2.1E-43 score: 148.5
IPR028364	Ribosomal protein L1/ribosomal biogenesis protein	CDD	cd00403	Ribosomal_L1	coord: 9..215 e-value: 3.24141E-62 score: 190.858
IPR016095	Ribosomal protein L1, 3-layer alpha/beta-sandwich	GENE3D	3.40.50.790		coord: 65..154 e-value: 6.4E-61 score: 207.3
IPR023673	Ribosomal protein L1, conserved site	PROSITE	PS01199	RIBOSOMAL_L1	coord: 116..135
IPR023674	Ribosomal protein L1-like	SUPERFAMILY	56808	Ribosomal protein L1	coord: 3..216

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
MC02g_new0053.1	MC02g_new0053.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0000470	maturation of LSU-rRNA
biological_process	GO:0006412	translation
cellular_component	GO:0022625	cytosolic large ribosomal subunit
cellular_component	GO:0015934	large ribosomal subunit
molecular_function	GO:0003723	RNA binding
molecular_function	GO:0003735	structural constituent of ribosome