MC02g_new0024 (gene) Bitter gourd (Dali-11) v1

Overview
NameMC02g_new0024
Typegene
OrganismMomordica charantia cv. Dali-11 (Bitter gourd (Dali-11) v1)
DescriptionUnknown protein
LocationMC02: 812144 .. 817766 (-)
RNA-Seq ExpressionMC02g_new0024
SyntenyMC02g_new0024
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGTGAAGGACAAAGGAAAAAACTTCATAGAGGATCCGGTAGAAGAGGCCGAGACATTGGACGATGTTGCATTATAGGGTCCTGCATTAGACGATGCTGGACCCAGTGGAAATGACAGCGAAGCCCTACAGAAGAGGTTGAAACGGAAAAAATTCAAAAATAAGATCAGTAGAAGGTTGAAGAGGCTCGATGACCGAGTTGGTGCTATCGAGGCCACACTGACTGGCTTCGAGGCCACACTGACTGGCTTCGGGGTTGCCCTGAAAGGCATCCAGAGATACCTTAAAAAAATGTCGAAGGTACGCATTTTATATGTATATAACATTAGGTATGCTTAGTTATTAATTATGATTAGTTGGGTCCGAGCTAACGCTCATTGGTCCGTACTTTTCGTGCATGGTAAATTCCCTGATCCGACCAAATATTTTGGACGTGGGGGTGGGCTCGATGATGATGATCCATCGGATCAAAGGTCTGATGAGGCCCCAACATGAGGTTTGAAGAGTATGGACGAGGACCGGAGGCCGGAAGCGGTCCCTAAGACTGACGAGTATCAGACCATGGACGATAATCCGAAGAGTATGGACGAGGATCCGAAGAATATGGACGAGGATCCGATGTTTATGGTTGAAGACCAGGGTACGATAACGGAGCGGGACAATGCATCGGATGCTTACCCCGATCGTCCTGTCGGTTTGTTTCAGGTAAGTCCTATTTCTATAATGCTAGTATACGTTTGTGCTTCCATATACCAATATGACTAATATTGGTTGTATATTAGGATGCCATTGTTGGAATGCAAGAGCCGGACGTTGCATCAGATACGCAACCCGTCAGCCGACGCGTTAGGCGTCCCTATAAGGACTGGGCACCGGACGCAGTCATTAAGGTAAACTGTCATTACACGAACTGTGTATTGTGTTTTAGGTTGAACCTTACCTTGACCAGGACGAATATGACCTTCAGCAGGCCCCAACTGGGCGTGGGCTACGCAAAAGGCATTACTCTTGGAAGCTGAAGGATATATACACACCAACCGGTCAGCGTGGGATCACCGTGGATAGATACGACCCAGTATGTCCCATTCCACCGCAGTTGGACGATAAGTTCCAGAGATGGATGGATGACCCGAAGACGGATGGGAGATTGCGGTCCACTGCAACTGGTTTCCAAAAGAAGGAATGGTATCGCGATCTATTGGACCCTAGTGTTGAATTGAAGGACGAAGTAAGTACATGTTACTATATTCGTAGTACTATATTCGTCAATATGTTTGATTACATCAATGTGGATTGGTTAAATGTAACAGGTACTTGATGGTCTCGTCCTGTTTACAGCGAAAAAGTTGGAGAAGTGTCTCCATCTATGTCGCAAGAAGTTTGCGATAGGCGACGTACTTCTTTCGGTAATTACTTTTTACTTCTTCCGGTTCGAACTAATAAATGTTGTTTTGAACAATTCTTTAACTAATGAATTACTTTTTAACTGCTATACAGACTCTGCTGAATCGGACAGACGGTCCATATGCGGCCATGAAGCCGAGTGTATTGTCCACTAGGATCAACTACCCTTGGTGCGAGGAGAATACAATCTGGCGATATGTCCACGGTAGGCAGTCGGAACACAACGTGCCCTGGAGTGATGCAGACATCGTGTACACCCCCATGAACGTAGGCGGGAACCACTGGGTGATGCTCGGGATCGACCTTGTACAGGGCGACATAACCGTATGGGATTCACTCCAAACGACCACTCCACTGGATGAACTTGAGAAGGAGTTGAAGCCCATGTGTACAATCCTACCTACGCTACTGCATCATGGCGGGATATTTTCAGTTCGACCCGATTTGCCAGTGGTGCCGTGGAGGGTACGTCGGGTTCGCGTACCACAGCAGAGTAGTGCGACTGATTGCGGGATTTTCTGTGTCCGGTATTTCGAGTACGATGCCACCGGGTCAAATATGAACACTTTAACCCAATATAATATTGTATATTTTAGGCGTCAGTACACTGTACAGATGTGGGCGCGTCGTCCCATTTTTTGAATAGTATGCATTTTCGATATTGTTTCTATGTCATGGTTCATTATTCTAACATCATACATGAATGACACATTCAAATACAATCTCCCCATTAATAATGATAATAATAATATAACAGGTAGGGTTATCAATGCATGCATGCAAGGTTGGTTGCTTGGGGTACAAGTTACCATACAAATTTATGAAAAACCAACAAGTTACCAATACATCATACATTTACGCTGTGTTAAGGGGTTCATTACATGTTTTGCGATTGAGCCCAGATTGAGTTGAAATAAGACTCTTGATATGCTTTCCCAGCTTTTAGAAATAGTTCCTCGACTGCCTTTGCATCGACTTTAAATTTTGCTAACAAGTTCATCTTAATATGTTGTATACAAAAGCAATAAAATGCAGTGGGAAATACCTTGTCAATTGCCTTACAAATGGTGTGATGTCTATCAGAAACGAAAACCAAATTGTTCACTACGCCAAGCGCACCTTTTAATTGAGTCATAAACCATACCCATGATGCTACAGTCTCACCGTCGACAATAGCAAATGCAACAGGGTAAATCTGGTTATTCGCATCCGCACCAGAAGCTGTTAACAATACCCCTCTGAACTTCCCTTTTAGATGGGCCCCGTCGACAACCAACACTGGTCGAATACAAGCCAGAAACCCTCTAATCGATTGACCCAAAGTCATAAAGACATATTTGAAATATTTTCCATCTTTCAGTTCCAATTCGAAAATAGTACCTGGGTTCATGATTTTTAATGCTTCACCATAAGCTGGTAGTAGACCGTATGACGATGCTGGATCCCCTCTAATAAGTCGAAGTGCTTCTTCACTGGACCGCCAAGCTTTGTCATAACTTATATTCACACCATACTTCTTCCTCATGTCTTGTATTATGTCCTTCGGTCTATACGTGCGGGAGACGTCTGTAAACTTCGCTTGGACAAGATGTCCGACCACCCAACTTTTGGCTTGCCTATGATCTGTTTCAAAACTCCACCATTGCATGTATGGATGCTATAGTATTTTTTTATCTTGAACAGATTGCAGTCCCTCAACTTTGTAGCTCGAAGTCTCCAGGTGCAACTAGTATCAACGCAGCGTAGTATATATAGTTCCGGTGTCGACTTTTTTATTTTAAACTGAAAATTCAGCCGCATTGCAACTAAATGCATTCTCAAACTCAACTCCTTCTTCGTATCAAATACTTCGCCCTCCTTAACATCATTTGTTCCAGAAGACTGTACCATGAGTTGCAACTTCTCATCATTAGGCTGCCCAGTGAGACCATCACACCCCATTTGTTGAACGGCTGCTTCATCCCTACGAATCTCAGCATGTACCTGTTCCACATCGGGCTCAGACTCTTCATCAAGTGCATCGTCATAGTCATCATTCACAAATTCCGCATCATAGTGTCCTTCTTCTGACTCTCCCAACGGGTCATATGATTCATCACTTTCATCTTGATTATCATTCAATAATCCCGGCACATTCCAATCACATACCCTGTCATCTCCTAGCTTACATGGAACAACATCTGATTCCAATGGTGTTAAACCAGCTATATCATGACCTAAATGCCCGTAAAAGGGGTGTGGTTGTTGGGAAGAAGAGGGGTTCGATGATGAGGAAGGAAATGAATGTACCGAATCTGTGGGTCTCTGGAATGGGGGAATACAAGCTGTGGGCATACAACTCGAGCACACGTTTTGGCCTACATGATATAGGAAAGAAGGCATGTACGTTTCATTCTCATGTACCTACTTTGGCGTAGTAGATATGTATATAGGCAATTCAGAAACATCTTCACCAGTTAAAAAAAAATTCAGGTCATCGTCATCAGTTATCTCCATTACACAAACTTTAGTTTTAAAATGATATACGCGTCTAATTATAATATCGAACTGAAGGGGGTTTATATTACTCAATTTATACACGTGACCTAGAAATTCTCTGTACGTGGTTGTACTATCTACTGTCAATCCTCTCGTGCGACCACCAACGTAATCTTTTTCACTATCGTTCCATTCTCAACCAAATGTTATGAAAACACGAGGCATCCTTCAAATAGATCAAATCAAGTGAGATAAGAATATCGTCCAAAAAAAGTGGTAAAAAAATAAAAAAATACATGTCATCCCGGACCGTCCCGGACCAGTCTTGGTCCGAGACACATCCCGGACCACAGTGCTTCTATTGGTCCGGGATGTATCCCGGTTCACTCCCGAACCATCTTTCGATCCGGGATTGAACATTCAATCCCGGATCTCGAAGCTTCAATCTCGAAACAATACTTGGTCCGGGATACCGACTGCATTTTTTTTTCTTTTTCCAAGAAGCCAAGTGAAAATGTATGAATGGAAAATATTTCAAATCATTTCAGAAATTTTTATGTTAACGTACCTCTAACTCTTCAAATGTGAAAATGTGGGGACAACGATTTTAGATAGTGTGGGGACAATGATCAAACACGTGGCAATGTTTCTTTCCCGGATTTAAAAAAAAGCGTGATCTGCGAGGAGTTTGGATGGTGTGAAAATTTTGGATTGTTTCAAACTCAAAACATAAGTAAAATATGAGGTTAAAAGTTTGGTGAAATGGTTGGGTGGAAGTTAATGGGGAAGTTAATCTATCATAAATAAGGGTATATTTGTCTTTTCACTAAAGTGGATTCAAAATTAAGTAGAGGTGAGGTCAAAAATTAGGTTTTTTTGAAAGGGGTTCATTTATCCAGTTTGAACTATTGGTGGGGTCAAAAACCCCAAAAACCCTACGGCCATACCCTTCCAATGGTCCTAAAATCACGTGGATATGGTAAACAAAATTTTTTACGTCCACGTATTTCTAACCATTCCATCGCGATCGTACGATGTACATATTTCCCAACAAAAAAGTAAATAGGGCCAAACTAGTACTTTTCCTTTCTGCTATGTCAATTGGGTACGGTACTATGCTATAGCTATTAATTATTATACGAATTTTTTTCTTTCTTTGTTTAAGGGCCCCGTAACATTTTATTTTCATGACATGAGACCAAGTTACATTGCCGGAAACCTTGAGAGAGAGAGCCTATTAGAATGATAAGATTAGAGGACTACAAAGCTATGCTCTCCTTCAAAAAAAAAAAAAAAATGTAAAAAGAAAGAAACTTGAAGAATATCTCATTCATTTGATGGAACTGGACCTGAATTAAGGCTTCAATAAATTGTCTATTAGGAATTTGCTTTAGTGTGTTAATAGCTTGAAGGATCACCAACTAGTAAATCCGTACTTTATCCTTGATAAATTAGTAAGAAAATTTGTCAAATCCGTTCATAATTCGTATGCTCGTCTTCAAGCTATTGCTACTCTCTTTTGGAAACGTTTTTTTTTTTCTAGCCATAACGAATAACTTCTTCTCTTTTACAAGGTTCGTGATCTTTAGCCTCATGAATCAGGATAATTTGGTAGTATTAAATACGAAGTTATGTTGTGTTAATATGATATGAGCAACTTAATTGTGTTTTAATGTAATTCACAGGTTATTTAAAAAAGCAACTTGATAAATTTATTTTCAACTCTGCCAAAAGTAGATGA

mRNA sequence

ATGGTGAAGGACAAAGGAAAAAACTTCATAGAGGATCCGGGTCCTGCATTAGACGATGCTGGACCCAGTGGAAATGACAGCGAAGCCCTACAGAAGAGGTTGAAACGGAAAAAATTCAAAAATAAGATCAGTAGAAGGTTGAAGAGGCTCGATGACCGAGTTGGTGCTATCGAGGCCACACTGACTGGCTTCGAGGCCACACTGACTGGCTTCGGGGTTGCCCTGAAAGGCATCCAGAGATACCTTAAAAAAATGTCGAAGAGTATGGACGAGGACCGGAGGCCGGAAGCGGTCCCTAAGACTGACGAGTATCAGACCATGGACGATAATCCGAAGAGTATGGACGAGGATCCGAAGAATATGGACGAGGATCCGATGTTTATGGTTGAAGACCAGGGTACGATAACGGAGCGGGACAATGCATCGGATGCTTACCCCGATCGTCCTGTCGGTTATTTAAAAAAGCAACTTGATAAATTTATTTTCAACTCTGCCAAAAGTAGATGA

Coding sequence (CDS)

ATGGTGAAGGACAAAGGAAAAAACTTCATAGAGGATCCGGGTCCTGCATTAGACGATGCTGGACCCAGTGGAAATGACAGCGAAGCCCTACAGAAGAGGTTGAAACGGAAAAAATTCAAAAATAAGATCAGTAGAAGGTTGAAGAGGCTCGATGACCGAGTTGGTGCTATCGAGGCCACACTGACTGGCTTCGAGGCCACACTGACTGGCTTCGGGGTTGCCCTGAAAGGCATCCAGAGATACCTTAAAAAAATGTCGAAGAGTATGGACGAGGACCGGAGGCCGGAAGCGGTCCCTAAGACTGACGAGTATCAGACCATGGACGATAATCCGAAGAGTATGGACGAGGATCCGAAGAATATGGACGAGGATCCGATGTTTATGGTTGAAGACCAGGGTACGATAACGGAGCGGGACAATGCATCGGATGCTTACCCCGATCGTCCTGTCGGTTATTTAAAAAAGCAACTTGATAAATTTATTTTCAACTCTGCCAAAAGTAGATGA

Protein sequence

MVKDKGKNFIEDPGPALDDAGPSGNDSEALQKRLKRKKFKNKISRRLKRLDDRVGAIEATLTGFEATLTGFGVALKGIQRYLKKMSKSMDEDRRPEAVPKTDEYQTMDDNPKSMDEDPKNMDEDPMFMVEDQGTITERDNASDAYPDRPVGYLKKQLDKFIFNSAKSR
Homology
[Close]
BLAST of MC02g_new0024 vs. NCBI nr
Match: XP_022153201.1 (uncharacterized protein LOC111020757 [Momordica charantia])

HSP 1 Score: 83.2 bits (204), Expect = 4.81e-15
Identity = 67/154 (43.51%), Postives = 84/154 (54.55%), Query Frame = 0 

Query: 10  IEDP---GPALDDAGPSGNDSEALQKRLKRKKFKNKISRRLKRLDDRVGAIEATLTGFEA 69
           +EDP     A+D+A PS ND E L+KRLK+ KFK +ISRRLKRLD+ VGAIE  L  F  
Sbjct: 341 LEDPVVDAHAVDEARPSANDGEGLEKRLKKNKFKKRISRRLKRLDNCVGAIEDKLGDF-- 400

Query: 70  TLTGFGVALKGIQRYLKKMSKSM------------------DEDRRPEAVPKTDEYQTMD 129
                GVALKGIQ YLKK++K                      D+RP+  PK D  +   
Sbjct: 401 -----GVALKGIQIYLKKLAKGKFPDSSKYFGGGGGPDDDGPSDQRPDESPKPDGGR--- 460

Query: 130 DNPKSMDEDPKNMDEDPMFMVEDQGTITERDNAS 142
              KSMDED ++ DED      D+   TE++  S
Sbjct: 461 ---KSMDEDQRS-DEDQRT---DEDLETEKEPTS 477

[Close]
BLAST of MC02g_new0024 vs. ExPASy TrEMBL
Match: A0A6J1DJX9 (uncharacterized protein LOC111020757 OS=Momordica charantia OX=3673 GN=LOC111020757 PE=4 SV=1)

HSP 1 Score: 83.2 bits (204), Expect = 2.33e-15
Identity = 67/154 (43.51%), Postives = 84/154 (54.55%), Query Frame = 0 

Query: 10  IEDP---GPALDDAGPSGNDSEALQKRLKRKKFKNKISRRLKRLDDRVGAIEATLTGFEA 69
           +EDP     A+D+A PS ND E L+KRLK+ KFK +ISRRLKRLD+ VGAIE  L  F  
Sbjct: 341 LEDPVVDAHAVDEARPSANDGEGLEKRLKKNKFKKRISRRLKRLDNCVGAIEDKLGDF-- 400

Query: 70  TLTGFGVALKGIQRYLKKMSKSM------------------DEDRRPEAVPKTDEYQTMD 129
                GVALKGIQ YLKK++K                      D+RP+  PK D  +   
Sbjct: 401 -----GVALKGIQIYLKKLAKGKFPDSSKYFGGGGGPDDDGPSDQRPDESPKPDGGR--- 460

Query: 130 DNPKSMDEDPKNMDEDPMFMVEDQGTITERDNAS 142
              KSMDED ++ DED      D+   TE++  S
Sbjct: 461 ---KSMDEDQRS-DEDQRT---DEDLETEKEPTS 477

The following BLAST results are available for this feature:
BLAST of MC02g_new0024 vs.
Match NameE-valueIdentityDescription
BLAST of MC02g_new0024 vs. NCBI nr
Match NameE-valueIdentityDescription
XP_022153201.14.81e-1543.51uncharacterized protein LOC111020757 [Momordica charantia][more]
BLAST of MC02g_new0024 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
A0A6J1DJX92.33e-1543.51uncharacterized protein LOC111020757 OS=Momordica charantia OX=3673 GN=LOC111020... [more]
BLAST of MC02g_new0024 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
InterPro
Analysis Name: InterPro Annotations of Bitter gourd (Dali-11) v1
Date Performed: 2021-10-25
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1..29
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 85..125

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
MC02g_new0024.1MC02g_new0024.1mRNA