MC02g1381 (gene) Bitter gourd (Dali-11) v1

Overview


Name	MC02g1381
Type	gene
Organism	Momordica charantia cv. Dali-11 (Bitter gourd (Dali-11) v1)
Description	Protein TIC 214
Location	MC02: 16282754 .. 16283056 (+)
RNA-Seq Expression	MC02g1381
Synteny	MC02g1381

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

TGGATACAGCAAAATAATTCTATTAGATCTAATGTACCTATTAGATCTAATAAGTACCTTGTGTCAGAATTGAGAAATTCTATGGCTCGAATCTTTAGTATTCTCTTATTTATTACCTGTGTCAACTATTTCGGCAGAATACCATCACCCATTGTTACTAAGAAACTGAAAGAAACCTCAAAAATGGAGGAAAGGGGAGCAAGTGAGGAAGAAACAGATGTAGAAATAGAAACCACTTCCGAAACGAAGGGGACTAAACAGGAACAAGAGGGATCCACCGAAGAAGATACTTCTCCTTCCCTT

mRNA sequence

TGGATACAGCAAAATAATTCTATTAGATCTAATGTACCTATTAGATCTAATAAGTACCTTGTGTCAGAATTGAGAAATTCTATGGCTCGAATCTTTAGTATTCTCTTATTTATTACCTGTGTCAACTATTTCGGCAGAATACCATCACCCATTGTTACTAAGAAACTGAAAGAAACCTCAAAAATGGAGGAAAGGGGAGCAAGTGAGGAAGAAACAGATGTAGAAATAGAAACCACTTCCGAAACGAAGGGGACTAAACAGGAACAAGAGGGATCCACCGAAGAAGATACTTCTCCTTCCCTT

Coding sequence (CDS)

TGGATACAGCAAAATAATTCTATTAGATCTAATGTACCTATTAGATCTAATAAGTACCTTGTGTCAGAATTGAGAAATTCTATGGCTCGAATCTTTAGTATTCTCTTATTTATTACCTGTGTCAACTATTTCGGCAGAATACCATCACCCATTGTTACTAAGAAACTGAAAGAAACCTCAAAAATGGAGGAAAGGGGAGCAAGTGAGGAAGAAACAGATGTAGAAATAGAAACCACTTCCGAAACGAAGGGGACTAAACAGGAACAAGAGGGATCCACCGAAGAAGATACTTCTCCTTCCCTT

Protein sequence

WIQQNNSIRSNVPIRSNKYLVSELRNSMARIFSILLFITCVNYFGRIPSPIVTKKLKETSKMEERGASEEETDVEIETTSETKGTKQEQEGSTEEDTSPSL

Homology

[Close]

BLAST of MC02g1381 vs. ExPASy Swiss-Prot
Match: A6MM95 (Protein TIC 214 OS=Buxus microphylla OX=153571 GN=TIC214 PE=3 SV=1)

HSP 1 Score: 158.3 bits (399), Expect = 4.6e-38
Identity = 88/101 (87.13%), Postives = 93/101 (92.08%), Query Frame = 0


Query: 1   WIQQNNSIRSNVPIRSNKYLVSELRNSMARIFSILLFITCVNYFGRIPSPIVTKKLKETS 60
           WI+QN+SI+SNV IRSNKYLVSELRNSMARIFSILLFITCV Y GR+P+PIVTKKLKETS
Sbjct: 191 WIRQNHSIKSNVLIRSNKYLVSELRNSMARIFSILLFITCVYYLGRMPAPIVTKKLKETS 250

Query: 61  KMEERGASEEETDVEIETTSETKGTKQEQEGSTEEDTSPSL 102
           K EERG SEEE DVEIETTSETKGTKQEQE STEED SPSL
Sbjct: 251 KTEERGESEEERDVEIETTSETKGTKQEQERSTEEDPSPSL 291

[Close]

BLAST of MC02g1381 vs. ExPASy Swiss-Prot
Match: Q06GT8 (Protein TIC 214 OS=Drimys granadensis OX=224735 GN=TIC214 PE=3 SV=1)

HSP 1 Score: 157.1 bits (396), Expect = 1.0e-37
Identity = 88/98 (89.80%), Postives = 90/98 (91.84%), Query Frame = 0


Query: 1   WIQQNNSIRSNVPIRSNKYLVSELRNSMARIFSILLFITCVNYFGRIPSPIVTKKLKETS 60
           WI+Q NSIRSNV IRSNKYLVSELRNSMARIFSILLFI CV Y GRIPSPIVTKKLKETS
Sbjct: 191 WIRQKNSIRSNVLIRSNKYLVSELRNSMARIFSILLFIICVYYLGRIPSPIVTKKLKETS 250

Query: 61  KMEERGASEEETDVEIETTSETKGTKQEQEGSTEEDTS 99
           + EERG SEEETDVEIETTSETKGTKQEQEGSTEED S
Sbjct: 251 ETEERGESEEETDVEIETTSETKGTKQEQEGSTEEDPS 288

[Close]

BLAST of MC02g1381 vs. ExPASy Swiss-Prot
Match: Q0ZIW0 (Protein TIC 214 OS=Vitis vinifera OX=29760 GN=TIC214 PE=3 SV=1)

HSP 1 Score: 157.1 bits (396), Expect = 1.0e-37
Identity = 88/101 (87.13%), Postives = 92/101 (91.09%), Query Frame = 0


Query: 1   WIQQNNSIRSNVPIRSNKYLVSELRNSMARIFSILLFITCVNYFGRIPSPIVTKKLKETS 60
           WI+QN SIRSNV IRSNKYLVSELRNSMARIFSILLFITCV Y GRIPSPI+TKK+KETS
Sbjct: 194 WIRQNPSIRSNVLIRSNKYLVSELRNSMARIFSILLFITCVYYLGRIPSPILTKKMKETS 253

Query: 61  KMEERGASEEETDVEIETTSETKGTKQEQEGSTEEDTSPSL 102
           + EERG SEEETDVEIE TSETKGTKQEQE STEED SPSL
Sbjct: 254 ETEERGESEEETDVEIERTSETKGTKQEQERSTEEDPSPSL 294

[Close]

BLAST of MC02g1381 vs. ExPASy Swiss-Prot
Match: Q0G9G1 (Protein TIC 214 OS=Liriodendron tulipifera OX=3415 GN=TIC214 PE=3 SV=1)

HSP 1 Score: 155.2 bits (391), Expect = 3.9e-37
Identity = 87/98 (88.78%), Postives = 90/98 (91.84%), Query Frame = 0


Query: 1   WIQQNNSIRSNVPIRSNKYLVSELRNSMARIFSILLFITCVNYFGRIPSPIVTKKLKETS 60
           WI+QN+SIRSNV IRSNKYLVSELRNSMARIFSILLFITCV Y GRIPSPIVTKKLKETS
Sbjct: 191 WIRQNHSIRSNVLIRSNKYLVSELRNSMARIFSILLFITCVYYLGRIPSPIVTKKLKETS 250

Query: 61  KMEERGASEEETDVEIETTSETKGTKQEQEGSTEEDTS 99
           + EERG S EETDVEIETTSETKGTKQEQE STEED S
Sbjct: 251 ETEERGESAEETDVEIETTSETKGTKQEQEASTEEDPS 288

[Close]

BLAST of MC02g1381 vs. ExPASy Swiss-Prot
Match: Q49KU0 (Protein TIC 214 OS=Eucalyptus globulus subsp. globulus OX=71271 GN=TIC214 PE=3 SV=1)

HSP 1 Score: 154.5 bits (389), Expect = 6.6e-37
Identity = 86/98 (87.76%), Postives = 88/98 (89.80%), Query Frame = 0


Query: 1   WIQQNNSIRSNVPIRSNKYLVSELRNSMARIFSILLFITCVNYFGRIPSPIVTKKLKETS 60
           WIQQNNSIRSN  IRSNKYLVSELRNSMARIFSILLFITCV Y GRIPSPIVTKK KETS
Sbjct: 194 WIQQNNSIRSNKYIRSNKYLVSELRNSMARIFSILLFITCVYYLGRIPSPIVTKKFKETS 253

Query: 61  KMEERGASEEETDVEIETTSETKGTKQEQEGSTEEDTS 99
           + EERG  EEETDVEIETT ETKGT+QEQEGSTEED S
Sbjct: 254 ETEERGEGEEETDVEIETTFETKGTRQEQEGSTEEDPS 291

[Close]

BLAST of MC02g1381 vs. NCBI nr
Match: AXR94760.1 (hypothetical protein RF1, partial [Hodgsonia macrocarpa] >AXR94846.1 hypothetical protein RF1, partial [Hodgsonia macrocarpa])

HSP 1 Score: 170 bits (430), Expect = 7.15e-50
Identity = 94/101 (93.07%), Postives = 96/101 (95.05%), Query Frame = 0


Query: 1   WIQQNNSIRSNVPIRSNKYLVSELRNSMARIFSILLFITCVNYFGRIPSPIVTKKLKETS 60
           WIQQNNSIRSNV IRSNKYLVSELRNSMARIFSILLFITCV Y GRIPSPIVTKKLKETS
Sbjct: 191 WIQQNNSIRSNVLIRSNKYLVSELRNSMARIFSILLFITCVYYLGRIPSPIVTKKLKETS 250

Query: 61  KMEERGASEEETDVEIETTSETKGTKQEQEGSTEEDTSPSL 101
           + EERG SE+ETDVEIETTSETKGTKQEQEGSTEEDTSPSL
Sbjct: 251 ETEERGESEQETDVEIETTSETKGTKQEQEGSTEEDTSPSL 291

[Close]

BLAST of MC02g1381 vs. NCBI nr
Match: YP_009753847.1 (Ycf1 protein [Trichosanthes pilosa] >QIT05711.1 Ycf1 protein [Trichosanthes pilosa])

HSP 1 Score: 171 bits (433), Expect = 1.82e-49
Identity = 95/101 (94.06%), Postives = 96/101 (95.05%), Query Frame = 0


Query: 1   WIQQNNSIRSNVPIRSNKYLVSELRNSMARIFSILLFITCVNYFGRIPSPIVTKKLKETS 60
           WIQQNNSIRSNV IRSNKYLVSELRNSMARIFSILLFITCV Y GRIPSPIVTKKLKETS
Sbjct: 192 WIQQNNSIRSNVLIRSNKYLVSELRNSMARIFSILLFITCVYYLGRIPSPIVTKKLKETS 251

Query: 61  KMEERGASEEETDVEIETTSETKGTKQEQEGSTEEDTSPSL 101
           + EERG SEEETDVEIETTSETKGTKQEQEGSTEEDTSPSL
Sbjct: 252 ETEERGESEEETDVEIETTSETKGTKQEQEGSTEEDTSPSL 292

[Close]

BLAST of MC02g1381 vs. NCBI nr
Match: YP_009456108.1 (Ycf1-like protein [Momordica charantia] >AUJ21875.1 Ycf1-like protein [Momordica charantia])

HSP 1 Score: 171 bits (433), Expect = 1.90e-49
Identity = 95/101 (94.06%), Postives = 96/101 (95.05%), Query Frame = 0


Query: 1   WIQQNNSIRSNVPIRSNKYLVSELRNSMARIFSILLFITCVNYFGRIPSPIVTKKLKETS 60
           WIQQNNSIRSNV IRSNKYLVSELRNSMARIFSILLFITCV Y GRIPSPIVTKKLKETS
Sbjct: 191 WIQQNNSIRSNVLIRSNKYLVSELRNSMARIFSILLFITCVYYLGRIPSPIVTKKLKETS 250

Query: 61  KMEERGASEEETDVEIETTSETKGTKQEQEGSTEEDTSPSL 101
           + EERG SEEETDVEIETTSETKGTKQEQEGSTEEDTSPSL
Sbjct: 251 ETEERGESEEETDVEIETTSETKGTKQEQEGSTEEDTSPSL 291

[Close]

BLAST of MC02g1381 vs. NCBI nr
Match: YP_009456193.1 (ycf1-like protein [Lagenaria siceraria] >AUJ21958.1 ycf1-like protein [Lagenaria siceraria])

HSP 1 Score: 171 bits (433), Expect = 1.90e-49
Identity = 95/101 (94.06%), Postives = 96/101 (95.05%), Query Frame = 0


Query: 1   WIQQNNSIRSNVPIRSNKYLVSELRNSMARIFSILLFITCVNYFGRIPSPIVTKKLKETS 60
           WIQQNNSIRSNV IRSNKYLVSELRNSMARIFSILLFITCV Y GRIPSPIVTKKLKETS
Sbjct: 191 WIQQNNSIRSNVLIRSNKYLVSELRNSMARIFSILLFITCVYYLGRIPSPIVTKKLKETS 250

Query: 61  KMEERGASEEETDVEIETTSETKGTKQEQEGSTEEDTSPSL 101
           + EERG SEEETDVEIETTSETKGTKQEQEGSTEEDTSPSL
Sbjct: 251 ETEERGESEEETDVEIETTSETKGTKQEQEGSTEEDTSPSL 291

[Close]

BLAST of MC02g1381 vs. NCBI nr
Match: QJD26342.1 (Ycf1 [Trichosanthes kirilowii] >QJD26429.1 Ycf1 [Trichosanthes kirilowii])

HSP 1 Score: 171 bits (433), Expect = 2.03e-49
Identity = 95/101 (94.06%), Postives = 96/101 (95.05%), Query Frame = 0


Query: 1   WIQQNNSIRSNVPIRSNKYLVSELRNSMARIFSILLFITCVNYFGRIPSPIVTKKLKETS 60
           WIQQNNSIRSNV IRSNKYLVSELRNSMARIFSILLFITCV Y GRIPSPIVTKKLKETS
Sbjct: 191 WIQQNNSIRSNVLIRSNKYLVSELRNSMARIFSILLFITCVYYLGRIPSPIVTKKLKETS 250

Query: 61  KMEERGASEEETDVEIETTSETKGTKQEQEGSTEEDTSPSL 101
           + EERG SEEETDVEIETTSETKGTKQEQEGSTEEDTSPSL
Sbjct: 251 ETEERGESEEETDVEIETTSETKGTKQEQEGSTEEDTSPSL 291

[Close]

BLAST of MC02g1381 vs. ExPASy TrEMBL
Match: A0A346QNS5 (Protein TIC 214 (Fragment) OS=Hodgsonia macrocarpa OX=2184935 GN=TIC214 PE=3 SV=1)

HSP 1 Score: 170 bits (430), Expect = 3.46e-50
Identity = 94/101 (93.07%), Postives = 96/101 (95.05%), Query Frame = 0


Query: 1   WIQQNNSIRSNVPIRSNKYLVSELRNSMARIFSILLFITCVNYFGRIPSPIVTKKLKETS 60
           WIQQNNSIRSNV IRSNKYLVSELRNSMARIFSILLFITCV Y GRIPSPIVTKKLKETS
Sbjct: 191 WIQQNNSIRSNVLIRSNKYLVSELRNSMARIFSILLFITCVYYLGRIPSPIVTKKLKETS 250

Query: 61  KMEERGASEEETDVEIETTSETKGTKQEQEGSTEEDTSPSL 101
           + EERG SE+ETDVEIETTSETKGTKQEQEGSTEEDTSPSL
Sbjct: 251 ETEERGESEQETDVEIETTSETKGTKQEQEGSTEEDTSPSL 291

[Close]

BLAST of MC02g1381 vs. ExPASy TrEMBL
Match: A0A6H0ETT1 (Protein TIC 214 OS=Trichosanthes pilosa OX=1144454 GN=ycf1 PE=3 SV=1)

HSP 1 Score: 171 bits (433), Expect = 8.80e-50
Identity = 95/101 (94.06%), Postives = 96/101 (95.05%), Query Frame = 0


Query: 1   WIQQNNSIRSNVPIRSNKYLVSELRNSMARIFSILLFITCVNYFGRIPSPIVTKKLKETS 60
           WIQQNNSIRSNV IRSNKYLVSELRNSMARIFSILLFITCV Y GRIPSPIVTKKLKETS
Sbjct: 192 WIQQNNSIRSNVLIRSNKYLVSELRNSMARIFSILLFITCVYYLGRIPSPIVTKKLKETS 251

Query: 61  KMEERGASEEETDVEIETTSETKGTKQEQEGSTEEDTSPSL 101
           + EERG SEEETDVEIETTSETKGTKQEQEGSTEEDTSPSL
Sbjct: 252 ETEERGESEEETDVEIETTSETKGTKQEQEGSTEEDTSPSL 292

[Close]

BLAST of MC02g1381 vs. ExPASy TrEMBL
Match: A0A2I6C0C0 (Protein TIC 214 OS=Lagenaria siceraria OX=3668 GN=TIC214 PE=3 SV=1)

HSP 1 Score: 171 bits (433), Expect = 9.21e-50
Identity = 95/101 (94.06%), Postives = 96/101 (95.05%), Query Frame = 0


Query: 1   WIQQNNSIRSNVPIRSNKYLVSELRNSMARIFSILLFITCVNYFGRIPSPIVTKKLKETS 60
           WIQQNNSIRSNV IRSNKYLVSELRNSMARIFSILLFITCV Y GRIPSPIVTKKLKETS
Sbjct: 191 WIQQNNSIRSNVLIRSNKYLVSELRNSMARIFSILLFITCVYYLGRIPSPIVTKKLKETS 250

Query: 61  KMEERGASEEETDVEIETTSETKGTKQEQEGSTEEDTSPSL 101
           + EERG SEEETDVEIETTSETKGTKQEQEGSTEEDTSPSL
Sbjct: 251 ETEERGESEEETDVEIETTSETKGTKQEQEGSTEEDTSPSL 291

[Close]

BLAST of MC02g1381 vs. ExPASy TrEMBL
Match: A0A2I6C026 (Protein TIC 214 OS=Momordica charantia OX=3673 GN=TIC214 PE=3 SV=1)

HSP 1 Score: 171 bits (433), Expect = 9.21e-50
Identity = 95/101 (94.06%), Postives = 96/101 (95.05%), Query Frame = 0


Query: 1   WIQQNNSIRSNVPIRSNKYLVSELRNSMARIFSILLFITCVNYFGRIPSPIVTKKLKETS 60
           WIQQNNSIRSNV IRSNKYLVSELRNSMARIFSILLFITCV Y GRIPSPIVTKKLKETS
Sbjct: 191 WIQQNNSIRSNVLIRSNKYLVSELRNSMARIFSILLFITCVYYLGRIPSPIVTKKLKETS 250

Query: 61  KMEERGASEEETDVEIETTSETKGTKQEQEGSTEEDTSPSL 101
           + EERG SEEETDVEIETTSETKGTKQEQEGSTEEDTSPSL
Sbjct: 251 ETEERGESEEETDVEIETTSETKGTKQEQEGSTEEDTSPSL 291

[Close]

BLAST of MC02g1381 vs. ExPASy TrEMBL
Match: A0A6M3RWE9 (Protein TIC 214 OS=Trichosanthes kirilowii OX=3677 GN=ycf1 PE=3 SV=1)

HSP 1 Score: 171 bits (433), Expect = 9.84e-50
Identity = 95/101 (94.06%), Postives = 96/101 (95.05%), Query Frame = 0


Query: 1   WIQQNNSIRSNVPIRSNKYLVSELRNSMARIFSILLFITCVNYFGRIPSPIVTKKLKETS 60
           WIQQNNSIRSNV IRSNKYLVSELRNSMARIFSILLFITCV Y GRIPSPIVTKKLKETS
Sbjct: 191 WIQQNNSIRSNVLIRSNKYLVSELRNSMARIFSILLFITCVYYLGRIPSPIVTKKLKETS 250

Query: 61  KMEERGASEEETDVEIETTSETKGTKQEQEGSTEEDTSPSL 101
           + EERG SEEETDVEIETTSETKGTKQEQEGSTEEDTSPSL
Sbjct: 251 ETEERGESEEETDVEIETTSETKGTKQEQEGSTEEDTSPSL 291

[Close]

BLAST of MC02g1381 vs. TAIR 10
Match: ATCG01130.1 (Ycf1 protein )

HSP 1 Score: 108.2 bits (269), Expect = 3.9e-24
Identity = 70/103 (67.96%), Postives = 71/103 (68.93%), Query Frame = 0


Query: 1   WIQQNNSIRSNVPIRSNKY--LVSELRNSMARIFSILLFITCVNYFGRIPSPIVTKKLKE 60
           WIQQNNSIRSNV IRSNKY  LVSELRNSMARIFSILLFITCV Y GRIPSPI TKKLK 
Sbjct: 195 WIQQNNSIRSNVVIRSNKYKFLVSELRNSMARIFSILLFITCVYYLGRIPSPIFTKKLK- 254

Query: 61  TSKMEERGASEEETDVEIETTSETKGTKQEQEGSTEEDTSPSL 102
                               TSET GTKQ+QE STEE   PSL
Sbjct: 255 -------------------GTSETGGTKQDQEVSTEEAPFPSL 277

[Close]

BLAST of MC02g1381 vs. TAIR 10
Match: ATCG01000.1 (Ycf1 protein )

HSP 1 Score: 108.2 bits (269), Expect = 3.9e-24
Identity = 70/103 (67.96%), Postives = 71/103 (68.93%), Query Frame = 0


Query: 1   WIQQNNSIRSNVPIRSNKY--LVSELRNSMARIFSILLFITCVNYFGRIPSPIVTKKLKE 60
           WIQQNNSIRSNV IRSNKY  LVSELRNSMARIFSILLFITCV Y GRIPSPI TKKLK 
Sbjct: 195 WIQQNNSIRSNVVIRSNKYKFLVSELRNSMARIFSILLFITCVYYLGRIPSPIFTKKLK- 254

Query: 61  TSKMEERGASEEETDVEIETTSETKGTKQEQEGSTEEDTSPSL 102
                               TSET GTKQ+QE STEE   PSL
Sbjct: 255 -------------------GTSETGGTKQDQEVSTEEAPFPSL 277

The following BLAST results are available for this feature:

BLAST of MC02g1381 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
A6MM95	4.6e-38	87.13	Protein TIC 214 OS=Buxus microphylla OX=153571 GN=TIC214 PE=3 SV=1	[more]
Q06GT8	1.0e-37	89.80	Protein TIC 214 OS=Drimys granadensis OX=224735 GN=TIC214 PE=3 SV=1	[more]
Q0ZIW0	1.0e-37	87.13	Protein TIC 214 OS=Vitis vinifera OX=29760 GN=TIC214 PE=3 SV=1	[more]
Q0G9G1	3.9e-37	88.78	Protein TIC 214 OS=Liriodendron tulipifera OX=3415 GN=TIC214 PE=3 SV=1	[more]
Q49KU0	6.6e-37	87.76	Protein TIC 214 OS=Eucalyptus globulus subsp. globulus OX=71271 GN=TIC214 PE=3 S...	[more]

BLAST of MC02g1381 vs. NCBI nr


Match Name	E-value	Identity	Description
AXR94760.1	7.15e-50	93.07	hypothetical protein RF1, partial [Hodgsonia macrocarpa] >AXR94846.1 hypothetica...	[more]
YP_009753847.1	1.82e-49	94.06	Ycf1 protein [Trichosanthes pilosa] >QIT05711.1 Ycf1 protein [Trichosanthes pilo...	[more]
YP_009456108.1	1.90e-49	94.06	Ycf1-like protein [Momordica charantia] >AUJ21875.1 Ycf1-like protein [Momordica...	[more]
YP_009456193.1	1.90e-49	94.06	ycf1-like protein [Lagenaria siceraria] >AUJ21958.1 ycf1-like protein [Lagenaria...	[more]
QJD26342.1	2.03e-49	94.06	Ycf1 [Trichosanthes kirilowii] >QJD26429.1 Ycf1 [Trichosanthes kirilowii]	[more]

BLAST of MC02g1381 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A346QNS5	3.46e-50	93.07	Protein TIC 214 (Fragment) OS=Hodgsonia macrocarpa OX=2184935 GN=TIC214 PE=3 SV=...	[more]
A0A6H0ETT1	8.80e-50	94.06	Protein TIC 214 OS=Trichosanthes pilosa OX=1144454 GN=ycf1 PE=3 SV=1	[more]
A0A2I6C0C0	9.21e-50	94.06	Protein TIC 214 OS=Lagenaria siceraria OX=3668 GN=TIC214 PE=3 SV=1	[more]
A0A2I6C026	9.21e-50	94.06	Protein TIC 214 OS=Momordica charantia OX=3673 GN=TIC214 PE=3 SV=1	[more]
A0A6M3RWE9	9.84e-50	94.06	Protein TIC 214 OS=Trichosanthes kirilowii OX=3677 GN=ycf1 PE=3 SV=1	[more]

BLAST of MC02g1381 vs. TAIR 10


Match Name	E-value	Identity	Description
ATCG01130.1	3.9e-24	67.96	Ycf1 protein	[more]
ATCG01000.1	3.9e-24	67.96	Ycf1 protein	[more]

InterPro

Analysis Name: InterPro Annotations of Bitter gourd (Dali-11) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR008896	Protein TIC214	PFAM	PF05758	Ycf1	coord: 1..101 e-value: 1.3E-50 score: 172.3
IPR008896	Protein TIC214	PANTHER	PTHR33163	PROTEIN TIC 214-RELATED	coord: 1..101
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 55..101
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 77..93
None	No IPR available	PANTHER	PTHR33163:SF13	PROTEIN TIC 214-RELATED	coord: 1..101

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
MC02g1381.1	MC02g1381.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0015031	protein transport
cellular_component	GO:0009706	chloroplast inner membrane
cellular_component	GO:0016021	integral component of membrane